Augustus predictions

SpeciesGenomeCDSProteinsGFF3 file
Aphanomyces euteiches ATCC201684
Aphanomyces euteiches ATCC201684 (pacbio)
Aphanomyces euteiches MF1
Aphanomyces euteiches NC1
Aphanomyces euteiches RB84
Aphanomyces euteiches 109
Aphanomyces astaci genotype E
Aphanomyces stellatus (strain:57867)


Secreted proteins (augustus+signalP predictions)
SpeciesCDSProteins
Aphanomyces euteiches ATCC201684
Aphanomyces euteiches MF1
Aphanomyces euteiches NC1
Aphanomyces euteiches RB84
Aphanomyces euteiches 109
Aphanomyces astaci genotype E
Aphanomyces stellatus (strain:57867)


Transposable elements
SpeciesConsensus sequencesGFF3 fileDescription
Aphanomyces euteiches ATCC201684
Aphanomyces astaci genotype E
Aphanomyces stellatus (strain:57867)


RNAseq data (Aphanomyces euteiches/Medicago truncatula interaction)
Files description
28_uniq_properpaired
29_uniq_properpaired
30_uniq_properpaired
F1_uniq_properpaired
F2_uniq_properpaired
F3_uniq_properpaired
F4_uniq_properpaired
F5_uniq_properpaired
F6_uniq_properpaired
F7_uniq_properpaired
F8_uniq_properpaired
F9_uniq_properpaired
Z1_uniq_properpaired
Z2_uniq_properpaired
Z3_uniq_properpaired