Blast

Database   

Program    Filter   eValue threshold

Sequences (supports multiple sequence, each with a separate FASTA header)




Programs:
    blastp (Protein query/Protein database)
    blastn (Nucleotide query/Nucleotide database)
    blastx (Nucleotide query/Protein database)
    tblastn (Protein query/Nucleotide database)
    tblastx (Nucleotide query/Nucleotide database. Query and database will be translated in 6 frames before alignement.)

Short or repetitive sequence might be filtered out as part of BLAST's native processing.

Databases:
    Protists: contains proteins ans transcripts from:
        - Ectocarpus siliculosus
        - Thalassiosira pseudonana
        - Phytophthora ramorum
        - Phytophthora sojae
        - Phytophthora infestans
        - Phytophthora parasitica
        - Hyaloperonospora arabidopsis
        - Pythium ultimum