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Overview

Region

Details

Augustus CDS

user track

TransposonPSI

Tracks

DNA

All on All off

6-frame translation

DNA/GC Content

General

All on All off

AphanoDB V1 (gmap result)	Cazy
Augustus CDS	user track

Reads (* data from Gaulin et al; 2008; PLoS One)

All on All off

Coverage Ae201684 infected 1 dpi (xyplot)	Coverage Ae201684 interaction (xyplot)	Reads Ae201684 infected 1dpi
Coverage Ae201684 infected 1 dpi(density plot)	Coverage Ae201684 mycelium (density plot)	Reads Ae201684 infected 3dpi
Coverage Ae201684 infected 3 dpi (xyplot)	Coverage Ae201684 mycelium (xyplot)	Reads Ae201684 infected 9dpi
Coverage Ae201684 infected 3 dpi(density plot)	Coverage Ae201684 mycelium* (density plot)	Reads Ae201684 interaction
Coverage Ae201684 infected 9 dpi (xyplot)	Coverage Ae201684 mycelium* (xyplot)	Reads Ae201684 mycelium
Coverage Ae201684 infected 9 dpi(density plot)	Coverage Ae201684 zoospore (density plot)	Reads Ae201684 mycelium*
Coverage Ae201684 interaction (density plot)	Coverage Ae201684 zoospore (xyplot)	Reads Ae201684 zoospore

Transposable Elements

All on All off

DNA_transposon	MITE	SINE
helentron	MITE manually curated	Tandem Repeat
helitron	non LTR retrotransposon	TransposonPSI
LTRretrotransposon	RepeatMasker
LTRretrotransposon (LTRHarvest prediction)	RepeatScoot

Snapshots

Snapshot Name

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