BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2921719.2.1
(779 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS13367.1| cyclin-dependent kinases regulatory subunit ... 158 2e-37
gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea tri... 156 7e-37
ref|XP_470214.1| Putative cyclin-dependent kinase regulator... 156 7e-37
ref|NP_180363.1| CKS1; cyclin-dependent protein kinase [Ara... 156 9e-37
emb|CAE54272.1| putative cyclin-dependent kinase regulatory... 154 4e-36
ref|NP_180364.1| CKS2; cyclin-dependent protein kinase [Ara... 152 1e-35
gb|AAO13226.1| CKS1 protein [Populus tremula x Populus trem... 150 5e-35
gb|AAV68608.1| cyclin-dependent kinases regulatory subunit ... 138 2e-31
sp|P55933|CKS1_PHYPO Probable cyclin-dependent kinases regu... 126 1e-27
gb|EAA03636.3| ENSANGP00000018659 [Anopheles gambiae str. P... 124 5e-27
ref|XP_912862.1| PREDICTED: similar to CDC28 protein kinase... 115 1e-24
gb|EAR85985.1| Cyclin-dependent kinase regulatory subunit f... 115 2e-24
gb|EAA06091.2| ENSANGP00000005592 [Anopheles gambiae str. P... 115 2e-24
emb|CAJ08910.1| cyclin-dependent kinase regulatory subunit ... 114 3e-24
emb|CAA90037.1| p12LmmCKS1 [Leishmania mexicana] >gi|249372... 114 4e-24
gb|AAX61170.1| CDC28 protein kinase 1 [Oreochromis mossambi... 114 4e-24
ref|NP_649817.1| Cyclin-dependent kinase subunit 85A CG9790... 114 5e-24
gb|AAX30511.2| SJCHGC04279 protein [Schistosoma japonicum] 114 5e-24
ref|NP_476947.1| Cyclin-dependent kinase subunit 30A CG3738... 113 7e-24
dbj|BAB27540.1| unnamed protein product [Mus musculus] 113 9e-24
gb|AAH22647.1| CDC28 protein kinase regulatory subunit 2 [M... 113 9e-24
ref|NP_001818.1| CDC28 protein kinase 2 [Homo sapiens] >gi|... 113 9e-24
ref|NP_001817.1| CDC28 protein kinase 1B [Homo sapiens] >gi... 113 9e-24
gb|AAP36951.1| Homo sapiens CDC28 protein kinase regulatory... 113 9e-24
pdb|2AST|C Chain C, Crystal Structure Of Skp1-Skp2-Cks1 In ... 113 9e-24
ref|XP_573992.1| PREDICTED: similar to Cyclin-dependent kin... 113 9e-24
emb|CAA82207.1| suc1 homologue [Patella vulgata] >gi|116896... 112 1e-23
ref|NP_001003593.1| hypothetical protein LOC445199 [Danio r... 112 2e-23
ref|XP_707977.1| PREDICTED: similar to CDC28 protein kinase... 112 2e-23
gb|AAK91295.2| CDC28 protein kinase 1-like protein [Branchi... 112 2e-23
dbj|BAB23169.1| unnamed protein product [Mus musculus] 112 2e-23
emb|CAG07937.1| unnamed protein product [Tetraodon nigrovir... 112 2e-23
ref|XP_895847.1| PREDICTED: similar to CDC28 protein kinase... 111 3e-23
ref|XP_947728.1| PREDICTED: similar to Cyclin-dependent kin... 110 4e-23
emb|CAH03383.1| Cyclin dependent kinase regulatory subunit,... 110 4e-23
ref|XP_624975.1| PREDICTED: similar to GA22037-PA [Apis mel... 110 4e-23
emb|CAG28558.1| CKS2 [Homo sapiens] 110 6e-23
ref|NP_001016170.1| CDC28 protein kinase regulatory subunit... 110 6e-23
gb|ABD36097.1| cyclin-dependent kinase regulatory subunit [... 110 8e-23
gb|EAL28963.1| GA22037-PA [Drosophila pseudoobscura] 109 1e-22
gb|AAO22151.1| cyclin-dependent kinase regulatory subunit [... 108 2e-22
ref|XP_815745.1| cyclin-dependent kinases regulatory subuni... 108 2e-22
ref|XP_802576.1| cyclin-dependent kinases regulatory subuni... 108 2e-22
gb|AAH68722.1| Xe-p9 protein [Xenopus laevis] >gi|2493726|s... 108 3e-22
gb|EAR92354.1| Cyclin-dependent kinase regulatory subunit f... 107 4e-22
gb|AAI06545.1| Unknown (protein for MGC:131304) [Xenopus la... 107 6e-22
dbj|BAE25818.1| unnamed protein product [Mus musculus] >gi|... 105 1e-21
emb|CAE69444.1| Hypothetical protein CBG15632 [Caenorhabdit... 105 1e-21
ref|XP_784027.1| PREDICTED: similar to Cyclin-dependent kin... 105 1e-21
emb|CAD43044.1| cyclin dependant kinases regulatory subunit... 105 2e-21
emb|CAG10835.1| unnamed protein product [Tetraodon nigrovir... 105 2e-21
ref|NP_001002110.1| hypothetical protein LOC415200 [Danio r... 105 2e-21
gb|EAR82230.1| Cyclin-dependent kinase regulatory subunit f... 104 3e-21
ref|XP_892193.1| PREDICTED: similar to Cyclin-dependent kin... 103 7e-21
ref|XP_522126.1| PREDICTED: similar to hypothetical protein... 103 9e-21
gb|AAF99866.1| Downstream of mes (in same operon) protein 6... 102 2e-20
gb|AAK73928.1| Hypothetical protein Y71G12B.27 [Caenorhabdi... 99 2e-19
ref|XP_779788.1| protein kinase [Giardia lamblia ATCC 50803... 98 4e-19
emb|CAE66732.1| Hypothetical protein CBG12081 [Caenorhabdit... 98 4e-19
emb|CAG88563.1| unnamed protein product [Debaryomyces hanse... 97 7e-19
gb|AAS56512.1| YBR135W [Saccharomyces cerevisiae] >gi|49686... 96 1e-18
emb|CAG58107.1| unnamed protein product [Candida glabrata C... 96 1e-18
ref|XP_452906.1| unnamed protein product [Kluyveromyces lac... 96 1e-18
gb|EAL20178.1| hypothetical protein CNBF2540 [Cryptococcus ... 96 2e-18
ref|NP_983056.1| ABR109Cp [Eremothecium gossypii] >gi|44980... 95 3e-18
ref|XP_654655.1| cyclin-dependent kinases regulatory subuni... 94 6e-18
ref|XP_759357.1| hypothetical protein UM03210.1 [Ustilago m... 94 6e-18
ref|XP_710663.1| protein kinase [Candida albicans SC5314] >... 94 7e-18
emb|CAI13257.1| CDC28 protein kinase regulatory subunit 1B ... 93 1e-17
ref|XP_520119.1| PREDICTED: similar to CDC28 protein kinase... 92 2e-17
emb|CAI13255.1| CDC28 protein kinase regulatory subunit 1B ... 92 2e-17
ref|XP_513844.1| PREDICTED: hypothetical protein XP_513844 ... 92 2e-17
ref|XP_886995.1| PREDICTED: similar to Cyclin-dependent kin... 92 2e-17
dbj|BAA01859.1| Cks1 protein [Saccharomyces cerevisiae] 91 5e-17
gb|AAC15772.1| Cdc2 binding protein Suc1 [Pneumocystis cari... 89 2e-16
ref|XP_505590.1| hypothetical protein [Yarrowia lipolytica]... 87 7e-16
emb|CAA21308.1| suc1 [Schizosaccharomyces pombe] >gi|191122... 86 2e-15
pdb|1PUC| P13suc1 In A Strand-Exchanged Dimer 86 2e-15
pdb|1SCE|D Chain D, Mol_id: 1; Molecule: Suc1; Chain: A, B,... 86 2e-15
gb|EAS00741.1| Cyclin-dependent kinase regulatory subunit f... 86 2e-15
ref|XP_385086.1| hypothetical protein FG04910.1 [Gibberella... 84 4e-15
gb|AAW44249.1| protein kinase activator, putative [Cryptoco... 84 8e-15
ref|XP_964606.1| hypothetical protein [Neurospora crassa N1... 83 1e-14
ref|XP_868806.1| hypothetical protein AN9424.2 [Aspergillus... 83 1e-14
gb|AAW43955.1| expressed protein [Cryptococcus neoformans v... 81 5e-14
gb|EAL20026.1| hypothetical protein CNBF3520 [Cryptococcus ... 81 5e-14
ref|XP_890349.1| PREDICTED: similar to Cyclin-dependent kin... 79 2e-13
ref|XP_645589.1| hypothetical protein DDB0216882 [Dictyoste... 78 3e-13
dbj|BAE65494.1| unnamed protein product [Aspergillus oryzae] 77 7e-13
ref|XP_766710.1| hypothetical protein TP01_1189 [Theileria ... 52 2e-05
ref|XP_899147.1| PREDICTED: similar to CDC28 protein kinase... 49 2e-04
gb|EAQ93474.1| conserved hypothetical protein [Chaetomium g... 47 6e-04
emb|CAI75479.1| hypothetical protein [Theileria annulata] >... 41 0.043
ref|XP_763284.1| hypothetical protein TP03_0266 [Theileria ... 41 0.043
ref|XP_763108.1| hypothetical protein TP03_0089 [Theileria ... 39 0.28
emb|CAI72903.1| cyclin-dependent kinase regulatory subunit,... 38 0.37
ref|XP_730271.1| hypothetical protein PY02394 [Plasmodium y... 37 0.82
ref|XP_679931.1| hypothetical protein [Plasmodium berghei s... 37 0.82
ref|XP_738753.1| hypothetical protein [Plasmodium chabaudi ... 37 0.82
emb|CAD51917.1| hypothetical protein [Plasmodium falciparum... 34 5.3
gb|AAN48153.1| hypothetical protein LA_0954 [Leptospira int... 34 6.9
ref|XP_679197.1| hypothetical protein [Plasmodium berghei s... 34 6.9
gb|AAY29233.1| maturase K [Araeococcus goeldianus] 33 9.0
gb|AAY29272.1| maturase K [Aechmea distichantha var. glazio... 33 9.0
gb|AAY29237.1| maturase K [Ochagavia elegans] 33 9.0
gb|AAW66586.1| maturase [Pabstia jugosa] 33 9.0
gb|AAW66554.1| maturase [Chondroscaphe escobariana] 33 9.0
>gb|AAS13367.1| cyclin-dependent kinases regulatory subunit [Glycine max]
Length = 88
Score = 158 bits (399), Expect = 2e-37
Identities = 72/73 (98%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
Length = 88
Score = 156 bits (395), Expect = 7e-37
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>ref|XP_470214.1| Putative cyclin-dependent kinase regulatory subunit [Oryza sativa]
gb|AAS99236.1| cyclin-dependent kinase subunit [Oryza sativa (japonica
cultivar-group)]
gb|AAK98736.1| Putative cyclin-dependent kinase regulatory subunit [Oryza sativa]
Length = 90
Score = 156 bits (395), Expect = 7e-37
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+N+
Sbjct: 61 EPHIMLFRRPLNF 73
>ref|NP_180363.1| CKS1; cyclin-dependent protein kinase [Arabidopsis thaliana]
emb|CAA03859.1| Cks1 protein [Arabidopsis thaliana]
gb|ABD38867.1| At2g27960 [Arabidopsis thaliana]
gb|AAD21506.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
gb|AAM65878.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
dbj|BAD43882.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
dbj|BAD43591.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
dbj|BAD43482.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
Length = 87
Score = 156 bits (394), Expect = 9e-37
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>emb|CAE54272.1| putative cyclin-dependent kinase regulatory subunit [Triticum
aestivum]
Length = 90
Score = 154 bits (389), Expect = 4e-36
Identities = 68/73 (93%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLL+ENEWRA+GVQQSRGWVHYA+HRP
Sbjct: 1 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSRGWVHYAVHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>ref|NP_180364.1| CKS2; cyclin-dependent protein kinase [Arabidopsis thaliana]
gb|AAR92293.1| At2g27970 [Arabidopsis thaliana]
gb|AAR24151.1| At2g27970 [Arabidopsis thaliana]
gb|AAD21505.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
Length = 83
Score = 152 bits (385), Expect = 1e-35
Identities = 68/73 (93%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>gb|AAO13226.1| CKS1 protein [Populus tremula x Populus tremuloides]
Length = 83
Score = 150 bits (379), Expect = 5e-35
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKY DDT+EYRHVVLPPEVAKLL KNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYLDDTFEYRHVVLPPEVAKLLIKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>gb|AAV68608.1| cyclin-dependent kinases regulatory subunit [Ostreococcus tauri]
Length = 77
Score = 138 bits (348), Expect = 2e-31
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
M QIQYSEKY+DD YEYRHVVLPP++AKLLPKNRLL+E EWR +GVQQSRGWVHYAIHRP
Sbjct: 1 MPQIQYSEKYYDDVYEYRHVVLPPDIAKLLPKNRLLTETEWRGLGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPI 310
EPHIML+RRP+
Sbjct: 61 EPHIMLYRRPL 71
>sp|P55933|CKS1_PHYPO Probable cyclin-dependent kinases regulatory subunit
Length = 84
Score = 126 bits (316), Expect = 1e-27
Identities = 53/68 (77%), Positives = 63/68 (92%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
IQYSEKY+DD +EYRHV+LPP+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6 IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65
Query: 287 IMLFRRPI 310
I+LFRR +
Sbjct: 66 ILLFRREV 73
>gb|EAA03636.3| ENSANGP00000018659 [Anopheles gambiae str. PEST]
ref|XP_307855.2| ENSANGP00000018659 [Anopheles gambiae str. PEST]
Length = 75
Score = 124 bits (310), Expect = 5e-27
Identities = 52/68 (76%), Positives = 62/68 (91%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY+DD YEYRHVVLP ++AKL+PK L++ENEWRAIGVQQSRGWVHY +H+PEPH
Sbjct: 6 IYYSDKYYDDEYEYRHVVLPKDIAKLVPKTHLMTENEWRAIGVQQSRGWVHYMVHQPEPH 65
Query: 287 IMLFRRPI 310
I+LFRRPI
Sbjct: 66 ILLFRRPI 73
>ref|XP_912862.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
[Mus musculus]
Length = 79
Score = 115 bits (289), Expect = 1e-24
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQSRGWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSRGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>gb|EAR85985.1| Cyclin-dependent kinase regulatory subunit family protein
[Tetrahymena thermophila SB210]
Length = 92
Score = 115 bits (288), Expect = 2e-24
Identities = 48/68 (70%), Positives = 60/68 (88%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I+YS+KY D+ YEYRHV+LP V K +PKN++L+E EWR++GVQQSRGWVHY IHRPEP
Sbjct: 7 EIEYSDKYTDEYYEYRHVILPKNVFKKIPKNKILTEAEWRSLGVQQSRGWVHYEIHRPEP 66
Query: 284 HIMLFRRP 307
HI+LFRRP
Sbjct: 67 HILLFRRP 74
>gb|EAA06091.2| ENSANGP00000005592 [Anopheles gambiae str. PEST]
ref|XP_310353.2| ENSANGP00000005592 [Anopheles gambiae str. PEST]
Length = 73
Score = 115 bits (287), Expect = 2e-24
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKY+DD YEYRHV+LPP++AK +PK L++E EWR +GVQQS GWV Y IH PEP
Sbjct: 3 QIQYSEKYYDDVYEYRHVILPPDLAKYVPKTHLMTETEWRNLGVQQSPGWVLYMIHSPEP 62
Query: 284 HIMLFRRP 307
H++LFRRP
Sbjct: 63 HVLLFRRP 70
>emb|CAJ08910.1| cyclin-dependent kinase regulatory subunit [Leishmania major]
Length = 99
Score = 114 bits (286), Expect = 3e-24
Identities = 48/80 (60%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Frame = +2
Query: 80 REALVDMGQIQ----YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSR 247
REAL+ + ++Q YS+KY+DD +EYRHV+LP ++A+L+P +RL+SE EWR +GVQQS+
Sbjct: 18 REALIIIKKLQCKILYSDKYYDDVFEYRHVILPKDLARLVPTSRLMSEMEWRQLGVQQSQ 77
Query: 248 GWVHYAIHRPEPHIMLFRRP 307
GWVHY IH+PEPH++LF+RP
Sbjct: 78 GWVHYMIHKPEPHVLLFKRP 97
>emb|CAA90037.1| p12LmmCKS1 [Leishmania mexicana]
sp|Q25330|CKS1_LEIME Cyclin-dependent kinases regulatory subunit (P12LMMCKS1)
Length = 99
Score = 114 bits (285), Expect = 4e-24
Identities = 48/80 (60%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Frame = +2
Query: 80 REALVDMGQIQ----YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSR 247
REAL+ + ++Q YS+KY+DD +EYRHV+LP ++A+L+P +RL+SE EWR +GVQQS+
Sbjct: 18 REALIIIKKLQCKILYSDKYYDDMFEYRHVILPKDLARLVPTSRLMSEMEWRQLGVQQSQ 77
Query: 248 GWVHYAIHRPEPHIMLFRRP 307
GWVHY IH+PEPH++LF+RP
Sbjct: 78 GWVHYMIHKPEPHVLLFKRP 97
>gb|AAX61170.1| CDC28 protein kinase 1 [Oreochromis mossambicus]
Length = 78
Score = 114 bits (285), Expect = 4e-24
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY DD YEYRHV+LP E+AK +PK L+SE EWR +GVQQS+GWVHY IH+PEP
Sbjct: 5 QIYYSDKYDDDKYEYRHVMLPKELAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>ref|NP_649817.1| Cyclin-dependent kinase subunit 85A CG9790-PA [Drosophila
melanogaster]
gb|AAM27495.1| GM01344p [Drosophila melanogaster]
gb|AAF54272.1| CG9790-PA [Drosophila melanogaster]
Length = 96
Score = 114 bits (284), Expect = 5e-24
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKYFDD +EYRHV+LPP++AK +PK L++E EWR +GVQQS GWVHY +H PEP
Sbjct: 5 QIQYSEKYFDDNFEYRHVILPPDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64
Query: 284 HIMLFRR 304
H++LFRR
Sbjct: 65 HVILFRR 71
>gb|AAX30511.2| SJCHGC04279 protein [Schistosoma japonicum]
Length = 92
Score = 114 bits (284), Expect = 5e-24
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YSEKY+DD YEYRHV LP E+AK +PKN L+SE EWR +G+QQS GWVHY IH PEPH
Sbjct: 2 IYYSEKYYDDVYEYRHVHLPKELAKQVPKNHLMSEMEWRKLGIQQSAGWVHYMIHEPEPH 61
Query: 287 IMLFRRP 307
I+LFRRP
Sbjct: 62 IILFRRP 68
>ref|NP_476947.1| Cyclin-dependent kinase subunit 30A CG3738-PA [Drosophila
melanogaster]
gb|AAL28833.1| LD20271p [Drosophila melanogaster]
gb|AAF52763.1| CG3738-PA [Drosophila melanogaster]
sp|Q24152|CKS1_DROME Cyclin-dependent kinases regulatory subunit
gb|AAB02189.1| DmCks1
Length = 74
Score = 113 bits (283), Expect = 7e-24
Identities = 46/67 (68%), Positives = 59/67 (88%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY+D+ +EYRHVVLP E+ K++PK L++E EWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5 IYYSDKYYDEQFEYRHVVLPKELVKMVPKTHLMTEAEWRSIGVQQSRGWIHYMIHKPEPH 64
Query: 287 IMLFRRP 307
I+LFRRP
Sbjct: 65 ILLFRRP 71
>dbj|BAB27540.1| unnamed protein product [Mus musculus]
Length = 79
Score = 113 bits (282), Expect = 9e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYEDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>gb|AAH22647.1| CDC28 protein kinase regulatory subunit 2 [Mus musculus]
dbj|BAE38947.1| unnamed protein product [Mus musculus]
dbj|BAB22110.1| unnamed protein product [Mus musculus]
dbj|BAB23199.1| unnamed protein product [Mus musculus]
gb|AAH94919.1| CDC28 protein kinase regulatory subunit 2 [Mus musculus]
sp|P56390|CKS2_MOUSE Cyclin-dependent kinases regulatory subunit 2 (CKS-2)
ref|NP_079691.1| CDC28 protein kinase regulatory subunit 2 [Mus musculus]
Length = 79
Score = 113 bits (282), Expect = 9e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>ref|NP_001818.1| CDC28 protein kinase 2 [Homo sapiens]
emb|CAI41365.1| CDC28 protein kinase regulatory subunit 2 [Homo sapiens]
gb|AAP35276.1| CDC28 protein kinase regulatory subunit 2 [Homo sapiens]
gb|AAI05332.1| Unknown (protein for MGC:127509) [Bos taurus]
gb|AAM22232.1| CDC28 protein kinase 2 [Homo sapiens]
emb|CAG46915.1| CKS2 [Homo sapiens]
gb|AAX32592.1| CDC28 protein kinase regulatory subunit 2 [synthetic construct]
gb|AAX32591.1| CDC28 protein kinase regulatory subunit 2 [synthetic construct]
gb|AAH06458.1| CDC28 protein kinase 2 [Homo sapiens]
sp|P33552|CKS2_HUMAN Cyclin-dependent kinases regulatory subunit 2 (CKS-2)
emb|CAA38703.1| Cks1 protein homologue [Homo sapiens]
pdb|1CKS|C Chain C, Cyclin-Dependent Kinase Subunit Type 2 (Ckshs2)
pdb|1CKS|B Chain B, Cyclin-Dependent Kinase Subunit Type 2 (Ckshs2)
pdb|1CKS|A Chain A, Cyclin-Dependent Kinase Subunit Type 2 (Ckshs2)
Length = 79
Score = 113 bits (282), Expect = 9e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>ref|NP_001817.1| CDC28 protein kinase 1B [Homo sapiens]
gb|AAH76579.1| CDC28 protein kinase 1b [Mus musculus]
gb|AAH70320.1| CDC28 protein kinase 1B [Homo sapiens]
gb|AAH70319.1| CDC28 protein kinase 1B [Homo sapiens]
ref|XP_873803.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) isoform 1 [Bos taurus]
emb|CAI13256.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
ref|XP_855067.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Canis familiaris]
gb|AAP35860.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
gb|AAH07751.1| CDC28 protein kinase 1B [Homo sapiens]
dbj|BAC25295.1| unnamed protein product [Mus musculus]
dbj|BAB27837.1| unnamed protein product [Mus musculus]
gb|AAH15629.1| CDC28 protein kinase 1B [Homo sapiens]
gb|AAK07553.1| PNAS-143 [Homo sapiens]
gb|AAK07518.1| PNAS-16 [Homo sapiens]
gb|AAX32676.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
gb|AAX32675.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
sp|P61024|CKS1_HUMAN Cyclin-dependent kinases regulatory subunit 1 (CKS-1)
ref|NP_058600.1| CDC28 protein kinase 1b [Mus musculus]
sp|P61025|CKS1_MOUSE Cyclin-dependent kinases regulatory subunit 1 (CKS-1) (Sid 1334)
emb|CAA38702.1| Cks1 protein homologue [Homo sapiens]
pdb|1BUH|B Chain B, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DKT|B Chain B, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1
Complex With Metavanadate
pdb|1DKT|A Chain A, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1
Complex With Metavanadate
pdb|1DKS|B Chain B, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1 In
Complex With Phosphate
pdb|1DKS|A Chain A, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1 In
Complex With Phosphate
dbj|BAA84694.1| sid1334p [Mus musculus]
Length = 79
Score = 113 bits (282), Expect = 9e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>gb|AAP36951.1| Homo sapiens CDC28 protein kinase regulatory subunit 1B [synthetic
construct]
gb|AAX29280.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
gb|AAX29279.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
Length = 80
Score = 113 bits (282), Expect = 9e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>pdb|2AST|C Chain C, Crystal Structure Of Skp1-Skp2-Cks1 In Complex With A P27
Peptide
pdb|2ASS|C Chain C, Crystal Structure Of The Skp1-Skp2-Cks1 Complex
Length = 69
Score = 113 bits (282), Expect = 9e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 1 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 60
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 61 HILLFRRPL 69
>ref|XP_573992.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 2
(CKS-2) [Rattus norvegicus]
Length = 296
Score = 113 bits (282), Expect = 9e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 222 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 281
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 282 HILLFRRPL 290
>emb|CAA82207.1| suc1 homologue [Patella vulgata]
sp|P41384|CKS1_PATVU Cyclin-dependent kinases regulatory subunit (SUC1 homolog)
Length = 76
Score = 112 bits (281), Expect = 1e-23
Identities = 46/69 (66%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ +EYRHV+LP ++AK++PKN L+SE EWR+IGVQQS GW+HY H PEP
Sbjct: 5 QIYYSDKYFDEDFEYRHVMLPKDIAKMVPKNHLMSEAEWRSIGVQQSHGWIHYMKHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRR +
Sbjct: 65 HILLFRRKV 73
>ref|NP_001003593.1| hypothetical protein LOC445199 [Danio rerio]
gb|AAH77092.1| Zgc:101026 [Danio rerio]
Length = 79
Score = 112 bits (280), Expect = 2e-23
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY DD +EYRHV+LP ++AK +PK L+SE EWR +GVQQS+GWVHY IH+PEP
Sbjct: 5 QIYYSDKYDDDKFEYRHVMLPKDIAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>ref|XP_707977.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
isoform 2 [Danio rerio]
ref|XP_685460.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
isoform 1 [Danio rerio]
Length = 78
Score = 112 bits (280), Expect = 2e-23
Identities = 45/69 (65%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ YEYRHV+LP +++KL+P + L+SE EWR +GVQQS+GW+HY IH+PEP
Sbjct: 7 QIYYSDKYSDEEYEYRHVMLPKQLSKLVPSSHLMSEEEWRGLGVQQSQGWIHYMIHKPEP 66
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 67 HILLFRRPL 75
>gb|AAK91295.2| CDC28 protein kinase 1-like protein [Branchiostoma belcheri]
Length = 79
Score = 112 bits (279), Expect = 2e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY+DD +EYRHV+LP E+AKL+PK+ L+SE+EWR IGVQQS+GW HY H PEPH
Sbjct: 6 IYYSDKYYDDKFEYRHVMLPKELAKLVPKSHLMSESEWRGIGVQQSQGWCHYMKHEPEPH 65
Query: 287 IMLFRRP 307
I+LFRRP
Sbjct: 66 ILLFRRP 72
>dbj|BAB23169.1| unnamed protein product [Mus musculus]
Length = 79
Score = 112 bits (279), Expect = 2e-23
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDKEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>emb|CAG07937.1| unnamed protein product [Tetraodon nigroviridis]
Length = 75
Score = 112 bits (279), Expect = 2e-23
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHVVLP E++KL+P + L+SE+EWR +GVQQS+GW+HY IH PEP
Sbjct: 5 QIYYSDKYNDEEFEYRHVVLPKELSKLVPSSHLMSEDEWRGLGVQQSQGWMHYMIHNPEP 64
Query: 284 HIMLFRRPIN 313
HI+LFRRP++
Sbjct: 65 HILLFRRPLS 74
>ref|XP_895847.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
[Mus musculus]
ref|XP_915638.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
[Mus musculus]
Length = 79
Score = 111 bits (278), Expect = 3e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFR+P+
Sbjct: 65 HILLFRQPL 73
>ref|XP_947728.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Homo sapiens]
ref|XP_934484.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Homo sapiens]
Length = 79
Score = 110 bits (276), Expect = 4e-23
Identities = 44/69 (63%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+P+ L+SE+EWR +G+QQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPETHLMSESEWRNLGIQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
H++LFRRP+
Sbjct: 65 HVLLFRRPL 73
>emb|CAH03383.1| Cyclin dependent kinase regulatory subunit, putative [Paramecium
tetraurelia]
ref|YP_054114.1| Cyclin dependent kinase regulatory subunit, putative [Paramecium
tetraurelia]
Length = 92
Score = 110 bits (276), Expect = 4e-23
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I+YS+KY DD YEYRHV+LP + K + K +LL+E EWRA+GVQQSRGW HY HRPEP
Sbjct: 7 EIEYSDKYLDDYYEYRHVILPKHIFKKITKGKLLNEMEWRALGVQQSRGWSHYETHRPEP 66
Query: 284 HIMLFRRPIN 313
HI+LFRRP N
Sbjct: 67 HILLFRRPKN 76
>ref|XP_624975.1| PREDICTED: similar to GA22037-PA [Apis mellifera]
Length = 95
Score = 110 bits (276), Expect = 4e-23
Identities = 47/68 (69%), Positives = 57/68 (83%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKY DD YEYRHV+LP ++A+ +PK L+SE EWR +GVQQS GWVHY +H PEP
Sbjct: 5 QIQYSEKYNDDKYEYRHVILPADLARHVPKTHLMSETEWRNLGVQQSPGWVHYMMHVPEP 64
Query: 284 HIMLFRRP 307
H++LFRRP
Sbjct: 65 HVLLFRRP 72
>emb|CAG28558.1| CKS2 [Homo sapiens]
Length = 79
Score = 110 bits (275), Expect = 6e-23
Identities = 47/69 (68%), Positives = 57/69 (82%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEY HV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYLHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>ref|NP_001016170.1| CDC28 protein kinase regulatory subunit 2 [Xenopus tropicalis]
Length = 79
Score = 110 bits (275), Expect = 6e-23
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY D+ YEYRHV+LP E+AK +PK L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6 IYYSDKYSDENYEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65
Query: 287 IMLFRRPI 310
I+LFRRP+
Sbjct: 66 ILLFRRPL 73
>gb|ABD36097.1| cyclin-dependent kinase regulatory subunit [Bombyx mori]
Length = 142
Score = 110 bits (274), Expect = 8e-23
Identities = 43/68 (63%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSE+Y DD YEYRHV+LPP++A+ +PK+ L++E EWR +GVQQS GW+H+ +H PEP
Sbjct: 5 QIQYSERYTDDVYEYRHVILPPDIARRVPKSHLMTETEWRNLGVQQSPGWLHFMVHNPEP 64
Query: 284 HIMLFRRP 307
++LFRRP
Sbjct: 65 QVLLFRRP 72
>gb|EAL28963.1| GA22037-PA [Drosophila pseudoobscura]
Length = 91
Score = 109 bits (273), Expect = 1e-22
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKYFDD +EYRHV+LP ++AK +PK L++E EWR +GVQQS GWVHY +H PEP
Sbjct: 5 QIQYSEKYFDDKFEYRHVILPSDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64
Query: 284 HIMLFRR 304
H++LFRR
Sbjct: 65 HVILFRR 71
>gb|AAO22151.1| cyclin-dependent kinase regulatory subunit [Trypanosoma cruzi]
Length = 98
Score = 108 bits (271), Expect = 2e-22
Identities = 44/68 (64%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YSEKY+DD YEYRHVVLP + A+L+P++RL+ E+EWR +GVQQS GW HY H+PEP
Sbjct: 28 KILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPEP 87
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 88 HVLLFKRP 95
>ref|XP_815745.1| cyclin-dependent kinases regulatory subunit [Trypanosoma cruzi
strain CL Brener]
gb|EAN93894.1| cyclin-dependent kinases regulatory subunit, putative [Trypanosoma
cruzi]
Length = 98
Score = 108 bits (271), Expect = 2e-22
Identities = 44/68 (64%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YSEKY+DD YEYRHVVLP + A+L+P++RL+ E+EWR +GVQQS GW HY H+PEP
Sbjct: 28 KILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPEP 87
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 88 HVLLFKRP 95
>ref|XP_802576.1| cyclin-dependent kinases regulatory subunit [Trypanosoma cruzi
strain CL Brener]
gb|EAN81130.1| cyclin-dependent kinases regulatory subunit, putative [Trypanosoma
cruzi]
Length = 78
Score = 108 bits (271), Expect = 2e-22
Identities = 44/68 (64%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YSEKY+DD YEYRHVVLP + A+L+P++RL+ E+EWR +GVQQS GW HY H+PEP
Sbjct: 8 KILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPEP 67
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 68 HVLLFKRP 75
>gb|AAH68722.1| Xe-p9 protein [Xenopus laevis]
sp|Q91879|CKS2_XENLA Cyclin-dependent kinases regulatory subunit 2 (Xe-p9)
gb|AAC59914.1| essential; similar to human cyclin dependent kinase subunit type 2,
Swiss-Prot Accession Number P33552
Length = 79
Score = 108 bits (269), Expect = 3e-22
Identities = 46/68 (67%), Positives = 56/68 (82%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY D+ +EYRHV+LP E+AK +PK L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6 IYYSDKYTDEHFEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65
Query: 287 IMLFRRPI 310
I+LFRRP+
Sbjct: 66 ILLFRRPL 73
>gb|EAR92354.1| Cyclin-dependent kinase regulatory subunit family protein
[Tetrahymena thermophila SB210]
Length = 92
Score = 107 bits (268), Expect = 4e-22
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I+YS+KY DD YEYRHV+LP + K + +N++++E EWR++GVQQSRGW HY IHRPEP
Sbjct: 7 EIEYSDKYCDDYYEYRHVILPKHLFKKMTRNKIMNETEWRSLGVQQSRGWQHYEIHRPEP 66
Query: 284 HIMLFRRPI 310
HI+LFRR I
Sbjct: 67 HILLFRRAI 75
>gb|AAI06545.1| Unknown (protein for MGC:131304) [Xenopus laevis]
Length = 78
Score = 107 bits (266), Expect = 6e-22
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY D+ YEYRHV+LP ++AK +PK L+SE+EWR +GVQQS+GWVHY IH PEPH
Sbjct: 6 IYYSDKYDDELYEYRHVMLPKDIAKRVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPH 65
Query: 287 IMLFRR 304
I+LFRR
Sbjct: 66 ILLFRR 71
>dbj|BAE25818.1| unnamed protein product [Mus musculus]
ref|NP_001033011.1| hypothetical protein LOC624855 [Mus musculus]
Length = 96
Score = 105 bits (263), Expect = 1e-21
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +2
Query: 71 GVDREALVDMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRG 250
G R A++ QI YS+KY D+ +EYRHV+LP ++ KL+PK L+SE+EWR +GVQQS+G
Sbjct: 11 GQRRGAIMSHKQIYYSDKYDDEEFEYRHVMLPKDIDKLVPKTHLMSESEWRKLGVQQSQG 70
Query: 251 WVHYAIHRPEPHIMLFRRPI 310
WVHY IH PE HI+LF+ P+
Sbjct: 71 WVHYMIHEPELHILLFQWPL 90
>emb|CAE69444.1| Hypothetical protein CBG15632 [Caenorhabditis briggsae]
Length = 94
Score = 105 bits (263), Expect = 1e-21
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS KY DD YEYRHV + +VAKL+PKNRL+SE EWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEYEYRHVHVTKDVAKLIPKNRLMSETEWRSLGIQQSPGWIHYMIHGPERHVL 69
Query: 293 LFRRPI 310
LFRRP+
Sbjct: 70 LFRRPL 75
>ref|XP_784027.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Strongylocentrotus purpuratus]
Length = 81
Score = 105 bits (263), Expect = 1e-21
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KYF +EYRHV+LP ++AKL+P N L+SE EWRAIGVQQS+GW++Y +H PEPH
Sbjct: 6 IYYSDKYFAGDFEYRHVMLPKDIAKLVP-NHLMSEKEWRAIGVQQSQGWINYMVHSPEPH 64
Query: 287 IMLFRRPI 310
I+LFRRPI
Sbjct: 65 ILLFRRPI 72
>emb|CAD43044.1| cyclin dependant kinases regulatory subunit [Trypanosoma brucei]
ref|XP_829696.1| cyclin dependant kinase regulatory subunit [Trypanosoma brucei
TREU927]
gb|EAN80584.1| cyclin dependant kinases regulatory subunit, putative [Trypanosoma
brucei]
Length = 98
Score = 105 bits (262), Expect = 2e-21
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YS+KY+DD YEYRHV+LP + ++L+P+ RL+ E+EWR +GVQQS GW HY +H PEP
Sbjct: 28 KILYSDKYYDDEYEYRHVILPKDFSRLVPRGRLMEESEWRQLGVQQSVGWRHYMLHAPEP 87
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 88 HVLLFKRP 95
>emb|CAG10835.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 105 bits (262), Expect = 2e-21
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY DD YEYRHV+LP E+AK +PK L+SE EWR +GVQQS+GWVHY IH+PEP
Sbjct: 5 QIYYSDKYDDDKYEYRHVMLPKEIAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64
Query: 284 HIMLF 298
HI+ F
Sbjct: 65 HILSF 69
>ref|NP_001002110.1| hypothetical protein LOC415200 [Danio rerio]
gb|AAH71486.1| Zgc:86839 [Danio rerio]
Length = 75
Score = 105 bits (261), Expect = 2e-21
Identities = 47/69 (68%), Positives = 57/69 (82%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY DD +EYRHVVLP E+AK +PK+ L+SE+E R +GVQQS GWVHY IH PE
Sbjct: 5 QIYYSDKYTDDHFEYRHVVLPRELAKQVPKSHLMSEDECRRLGVQQSLGWVHYMIHEPES 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>gb|EAR82230.1| Cyclin-dependent kinase regulatory subunit family protein
[Tetrahymena thermophila SB210]
Length = 149
Score = 104 bits (260), Expect = 3e-21
Identities = 42/69 (60%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN-RLLSENEWRAIGVQQSRGWVHYAIHRPE 280
+IQY EKY+DD YEYRHV+LP ++ K +P++ ++L+E++WR +G+QQSRGWVHY H+PE
Sbjct: 7 EIQYGEKYYDDYYEYRHVILPKQIFKTMPRDQKVLTESQWRMMGIQQSRGWVHYDSHKPE 66
Query: 281 PHIMLFRRP 307
P+I+LFRRP
Sbjct: 67 PYILLFRRP 75
>ref|XP_892193.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Mus musculus]
Length = 78
Score = 103 bits (257), Expect = 7e-21
Identities = 44/69 (63%), Positives = 57/69 (82%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRH VLP ++A L+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKY-DEEFEYRHAVLPKDIANLVPKTHLMSESEWRKLGVQQSQGWVHYMIHEPEP 63
Query: 284 HIMLFRRPI 310
HI+LF +P+
Sbjct: 64 HILLFPQPL 72
>ref|XP_522126.1| PREDICTED: similar to hypothetical protein FLJ37874 [Pan
troglodytes]
Length = 504
Score = 103 bits (256), Expect = 9e-21
Identities = 44/66 (66%), Positives = 56/66 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHVVLP ++AKL+ K L+SE+EWR +GVQQS+GWV+Y IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVVLPKDIAKLVRKTHLMSESEWRNLGVQQSQGWVYYMIHEPEP 64
Query: 284 HIMLFR 301
HI+LFR
Sbjct: 65 HILLFR 70
>gb|AAF99866.1| Downstream of mes (in same operon) protein 6 [Caenorhabditis
elegans]
ref|NP_501457.1| Downstream Of Mes (in same operon) family member (dom-6)
[Caenorhabditis elegans]
sp|Q17868|CKS1_CAEEL Cyclin-dependent kinases regulatory subunit
gb|AAC27123.1| cyclin kinase subunit [Caenorhabditis elegans]
Length = 94
Score = 102 bits (254), Expect = 2e-20
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS KY DD +EYRHV + +V+KL+PKNRL+SE EWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEFEYRHVHVTKDVSKLIPKNRLMSETEWRSLGIQQSPGWMHYMIHGPERHVL 69
Query: 293 LFRRPI 310
LFRRP+
Sbjct: 70 LFRRPL 75
>gb|AAK73928.1| Hypothetical protein Y71G12B.27 [Caenorhabditis elegans]
ref|NP_490896.1| Y71G12B.27 [Caenorhabditis elegans]
Length = 118
Score = 99.0 bits (245), Expect = 2e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
M I YS +Y DD YEYRHV+LP V++ +PK RLLSE EWR GVQQS GW HY +H P
Sbjct: 1 MEDIYYSPRYEDDEYEYRHVILPQAVSRKVPKGRLLSEAEWRRAGVQQSLGWEHYMVHNP 60
Query: 278 EPHIMLFRR 304
E HI+LFRR
Sbjct: 61 EKHILLFRR 69
>ref|XP_779788.1| protein kinase [Giardia lamblia ATCC 50803]
gb|EAA42928.1| GLP_170_20046_20303 [Giardia lamblia ATCC 50803]
Length = 85
Score = 97.8 bits (242), Expect = 4e-19
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS KY+DD YEYRHV++P E+ K + LLSE EWR +G+Q S+GWVHY H+PEP+I+
Sbjct: 11 YSRKYYDDVYEYRHVIMPEEMVKKYNFDHLLSEQEWRGLGIQMSQGWVHYDYHKPEPNIL 70
Query: 293 LFRRP 307
+FRRP
Sbjct: 71 MFRRP 75
>emb|CAE66732.1| Hypothetical protein CBG12081 [Caenorhabditis briggsae]
Length = 105
Score = 97.8 bits (242), Expect = 4e-19
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
M I YS +Y DD YEYRHV+LP +AK +P+++LL+E EWR +GV QS GW HY +H P
Sbjct: 1 MDDIYYSPRYEDDDYEYRHVILPHGLAKQIPRDKLLTEGEWRRLGVTQSLGWEHYMVHNP 60
Query: 278 EPHIMLFRRPINY 316
E HI+LFRR N+
Sbjct: 61 ERHILLFRRRRNF 73
>emb|CAG88563.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_460281.1| hypothetical protein DEHA0E23903g [Debaryomyces hansenii CBS767]
Length = 102
Score = 97.1 bits (240), Expect = 7e-19
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K +P++ R+L E EWR +G+ QS GW H
Sbjct: 22 IHYSPRYSDDTHEYRHVMLPKNMLKAIPQDYFNPETGTLRILQEEEWRGLGITQSLGWAH 81
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RPINY
Sbjct: 82 YETHAPEPHILLFKRPINY 100
>gb|AAS56512.1| YBR135W [Saccharomyces cerevisiae]
emb|CAA53493.1| CKS1 [Saccharomyces cerevisiae]
ref|NP_009693.1| Subunit of the Cdc28 protein kinase, required for mitotic
proteolysis, may also be involved in the proteolysis of
the G1 cyclins; Cks1p [Saccharomyces cerevisiae]
emb|CAA85092.1| CKS1 [Saccharomyces cerevisiae]
sp|P20486|CKS1_YEAST Cyclin-dependent kinases regulatory subunit (Cell division control
protein CKS1)
pdb|1QB3|C Chain C, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|B Chain B, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|A Chain A, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
prf||2118402J CKS1 gene
gb|AAA34879.1| protein kinase
Length = 150
Score = 96.3 bits (238), Expect = 1e-18
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DD YEYRHV+LP + K++P + R+L+E+EWR +G+ QS GW H
Sbjct: 28 IHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RP+NY
Sbjct: 88 YECHAPEPHILLFKRPLNY 106
>emb|CAG58107.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445203.1| unnamed protein product [Candida glabrata]
Length = 128
Score = 96.3 bits (238), Expect = 1e-18
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K++P + R+L+E+EWR +G+ QS GW H
Sbjct: 28 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RP+NY
Sbjct: 88 YECHAPEPHILLFKRPLNY 106
>ref|XP_452906.1| unnamed protein product [Kluyveromyces lactis]
emb|CAH01757.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 132
Score = 96.3 bits (238), Expect = 1e-18
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K++P + R+L+E+EWR +G+ QS GW H
Sbjct: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RP+NY
Sbjct: 87 YECHAPEPHILLFKRPLNY 105
>gb|EAL20178.1| hypothetical protein CNBF2540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 104
Score = 95.5 bits (236), Expect = 2e-18
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 10/79 (12%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGW 253
+I YS++Y DD +EYRHV+LP ++ KL+PK R+L E+EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDRFEYRHVILPKQMLKLIPKRYFASDDSGLLRILEEDEWRGIGITQSLGW 75
Query: 254 VHYAIHRPEPHIMLFRRPI 310
H+ +H PEPHI+LFRRP+
Sbjct: 76 EHFEVHAPEPHILLFRRPL 94
>ref|NP_983056.1| ABR109Cp [Eremothecium gossypii]
gb|AAS50880.1| ABR109Cp [Ashbya gossypii ATCC 10895]
Length = 119
Score = 95.1 bits (235), Expect = 3e-18
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K++P + R+L+E+EWR +GV QS GW H
Sbjct: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWEH 86
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RP+N+
Sbjct: 87 YECHAPEPHILLFKRPLNF 105
>ref|XP_654655.1| cyclin-dependent kinases regulatory subunit [Entamoeba histolytica
HM-1:IMSS]
ref|XP_651380.1| cyclin-dependent kinases regulatory subunit [Entamoeba histolytica
HM-1:IMSS]
ref|XP_650298.1| cyclin-dependent kinases regulatory subunit [Entamoeba histolytica
HM-1:IMSS]
gb|EAL49269.1| cyclin-dependent kinases regulatory subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gb|EAL45994.1| cyclin-dependent kinases regulatory subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gb|EAL44910.1| cyclin-dependent kinases regulatory subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 75
Score = 94.0 bits (232), Expect = 6e-18
Identities = 39/64 (60%), Positives = 53/64 (82%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS++Y DD YEYRHV+LP E+A L K+ L++E+EWR +G+QQS GWVHY I +PEP+++
Sbjct: 7 YSDRYKDDQYEYRHVILPDEMAAKLIKDHLMTEDEWRKLGIQQSVGWVHYDIFKPEPNVL 66
Query: 293 LFRR 304
LFRR
Sbjct: 67 LFRR 70
>ref|XP_759357.1| hypothetical protein UM03210.1 [Ustilago maydis 521]
gb|EAK84315.1| hypothetical protein UM03210.1 [Ustilago maydis 521]
Length = 127
Score = 94.0 bits (232), Expect = 6e-18
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 10/77 (12%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGW 253
+IQYS+KY DD +EYRHV+LP ++ KLLP++ R+LS EWR +G+ QS GW
Sbjct: 18 RIQYSDKYNDDEWEYRHVILPKKMLKLLPEDYFDPAEPGVLRILSVEEWRQLGITQSMGW 77
Query: 254 VHYAIHRPEPHIMLFRR 304
HY +H PEPHI+LFRR
Sbjct: 78 EHYEVHAPEPHILLFRR 94
>ref|XP_710663.1| protein kinase [Candida albicans SC5314]
ref|XP_710654.1| protein kinase [Candida albicans SC5314]
gb|EAK91415.1| hypothetical protein CaO19.1282 [Candida albicans SC5314]
gb|EAK91406.1| hypothetical protein CaO19.8869 [Candida albicans SC5314]
Length = 102
Score = 93.6 bits (231), Expect = 7e-18
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DD+YEYRHV+LP + K +P + R+L+E EWR +G+ QS GW H
Sbjct: 22 IHYSPRYSDDSYEYRHVMLPKNMLKAIPHDYFNQETGTLRILTEEEWRGLGITQSLGWAH 81
Query: 260 YAIHRPEPHIMLFRRPIN 313
Y H PEPHI+LF+RP+N
Sbjct: 82 YETHAPEPHILLFKRPLN 99
>emb|CAI13257.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
gb|AAK07520.1| PNAS-18 [Homo sapiens]
Length = 63
Score = 93.2 bits (230), Expect = 1e-17
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +2
Query: 149 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPI 310
RHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRP+
Sbjct: 4 RHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 57
>ref|XP_520119.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
[Pan troglodytes]
Length = 339
Score = 92.0 bits (227), Expect = 2e-17
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH P
Sbjct: 272 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEP 329
>emb|CAI13255.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
Length = 67
Score = 92.0 bits (227), Expect = 2e-17
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH P
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEP 62
>ref|XP_513844.1| PREDICTED: hypothetical protein XP_513844 [Pan troglodytes]
Length = 590
Score = 92.0 bits (227), Expect = 2e-17
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH P
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEP 62
>ref|XP_886995.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) isoform 2 [Bos taurus]
Length = 71
Score = 92.0 bits (227), Expect = 2e-17
Identities = 38/58 (65%), Positives = 49/58 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH P
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEP 62
>dbj|BAA01859.1| Cks1 protein [Saccharomyces cerevisiae]
Length = 119
Score = 90.9 bits (224), Expect = 5e-17
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 9/74 (12%)
Frame = +2
Query: 122 KYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVHYAIHR 274
+Y DD YEYRHV+LP + K++P + R+L+E+EWR +G+ QS GW HY H
Sbjct: 2 RYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEHYECHA 61
Query: 275 PEPHIMLFRRPINY 316
PEPHI+LF+RP+NY
Sbjct: 62 PEPHILLFKRPLNY 75
>gb|AAC15772.1| Cdc2 binding protein Suc1 [Pneumocystis carinii f. sp. carinii]
gb|AAC15771.1| Cdc2 binding protein Suc1 [Pneumocystis carinii f. sp. carinii]
Length = 114
Score = 88.6 bits (218), Expect = 2e-16
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 9/75 (12%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K +PK+ ++L E EWR +G+ QS GW H
Sbjct: 28 IHYSTRYSDDTHEYRHVILPKPMLKAIPKDYFNQETGTLKILHEEEWRGLGITQSLGWQH 87
Query: 260 YAIHRPEPHIMLFRR 304
Y IH PEPHI+LF+R
Sbjct: 88 YEIHVPEPHILLFKR 102
>ref|XP_505590.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG78399.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 99
Score = 87.0 bits (214), Expect = 7e-16
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DDT+EYRHV+LP + K +P++ R+L E EWR +G+ QS GW H
Sbjct: 23 IHYSTRYSDDTFEYRHVMLPKNMLKAIPRDYFNSETGTLRILLEEEWRGLGITQSLGWEH 82
Query: 260 YAIHRPEPHIMLFRR 304
Y H PEPHI+LF+R
Sbjct: 83 YETHAPEPHILLFKR 97
>emb|CAA21308.1| suc1 [Schizosaccharomyces pombe]
ref|NP_595431.1| cyclin-dependent protein kinase [Schizosaccharomyces pombe 972h-]
sp|P08463|CKS1_SCHPO Cyclin-dependent kinases regulatory subunit (P13)
gb|AAA35346.1| cell division protein
Length = 113
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWV 256
QI YS +Y DD YEYRHV+LP + K +P + R+L E EWR +G+ QS GW
Sbjct: 24 QIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLGWE 83
Query: 257 HYAIHRPEPHIMLFRRPINY 316
Y +H PEPHI+LF+R +Y
Sbjct: 84 MYEVHVPEPHILLFKREKDY 103
>pdb|1PUC| P13suc1 In A Strand-Exchanged Dimer
Length = 105
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWV 256
QI YS +Y DD YEYRHV+LP + K +P + R+L E EWR +G+ QS GW
Sbjct: 23 QIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLGWE 82
Query: 257 HYAIHRPEPHIMLFRRPINY 316
Y +H PEPHI+LF+R +Y
Sbjct: 83 MYEVHVPEPHILLFKREKDY 102
>pdb|1SCE|D Chain D, Mol_id: 1; Molecule: Suc1; Chain: A, B, C, D; Engineered:
Yes
pdb|1SCE|C Chain C, Mol_id: 1; Molecule: Suc1; Chain: A, B, C, D; Engineered:
Yes
pdb|1SCE|B Chain B, Mol_id: 1; Molecule: Suc1; Chain: A, B, C, D; Engineered:
Yes
pdb|1SCE|A Chain A, Mol_id: 1; Molecule: Suc1; Chain: A, B, C, D; Engineered:
Yes
Length = 112
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWV 256
QI YS +Y DD YEYRHV+LP + K +P + R+L E EWR +G+ QS GW
Sbjct: 24 QIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLGWE 83
Query: 257 HYAIHRPEPHIMLFRRPINY 316
Y +H PEPHI+LF+R +Y
Sbjct: 84 MYEVHVPEPHILLFKREKDY 103
>gb|EAS00741.1| Cyclin-dependent kinase regulatory subunit family protein
[Tetrahymena thermophila SB210]
Length = 79
Score = 85.5 bits (210), Expect = 2e-15
Identities = 30/71 (42%), Positives = 56/71 (78%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I+YS+ Y DD Y YR+V LP ++ K +PK ++++E+ WR++G++ S+GW H+ +++PEP
Sbjct: 7 EIEYSDTYNDDAYFYRNVRLPQDLYKKIPKGKIMTEDVWRSLGIKSSKGWQHFYVYKPEP 66
Query: 284 HIMLFRRPINY 316
I++ R+P+N+
Sbjct: 67 FIIMLRKPVNF 77
>ref|XP_385086.1| hypothetical protein FG04910.1 [Gibberella zeae PH-1]
gb|EAA74275.1| hypothetical protein FG04910.1 [Gibberella zeae PH-1]
Length = 167
Score = 84.3 bits (207), Expect = 4e-15
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Frame = +2
Query: 26 TLARHSSAKNASAPRGVDREALVDMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN--- 196
T R+ + + S E +D I YS +Y D YEYRHV LP + K +PK+
Sbjct: 7 TTRRNKAPRPLSDSERARVEEFID--SIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHD 64
Query: 197 ------RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLF 298
+LL E EWRA+G+ QS GW HY +H PEPHI+LF
Sbjct: 65 SSKGTLKLLWEEEWRALGITQSLGWEHYEVHEPEPHILLF 104
>gb|AAW44249.1| protein kinase activator, putative [Cryptococcus neoformans var.
neoformans JEC21]
ref|XP_571556.1| protein kinase activator [Cryptococcus neoformans var. neoformans
JEC21]
Length = 94
Score = 83.6 bits (205), Expect = 8e-15
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 10/72 (13%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGW 253
+I YS++Y DD +EYRHV+LP ++ KL+PK R+L E+EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDRFEYRHVILPKQMLKLIPKRYFASDDSGLLRILEEDEWRGIGITQSLGW 75
Query: 254 VHYAIHRPEPHI 289
H+ +H PEPHI
Sbjct: 76 EHFEVHAPEPHI 87
>ref|XP_964606.1| hypothetical protein [Neurospora crassa N150]
ref|XP_329269.1| hypothetical protein [Neurospora crassa]
gb|EAA35370.1| hypothetical protein [Neurospora crassa]
Length = 144
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = +2
Query: 26 TLARHSSAKNASAPRGVDREALVDMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN--- 196
T R+ S + S E +D I YS +Y D YEYRHV LP + K +P +
Sbjct: 10 TSRRNPSPRPLSDNERARLEEFID--SIHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHD 67
Query: 197 ------RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFR 301
+LL E EWRA+G+ QS GW HY +H PEPHI+LF+
Sbjct: 68 KSKGTLKLLWEEEWRAMGITQSLGWEHYEVHEPEPHILLFK 108
>ref|XP_868806.1| hypothetical protein AN9424.2 [Aspergillus nidulans FGSC A4]
gb|EAA66841.1| hypothetical protein AN9424.2 [Aspergillus nidulans FGSC A4]
Length = 146
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 10/84 (11%)
Frame = +2
Query: 77 DREALVD-MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRA 226
+RE L + + I YS +Y DD +EYRHV LP + K +P + +LL E EWRA
Sbjct: 19 ERERLDEFIDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRA 78
Query: 227 IGVQQSRGWVHYAIHRPEPHIMLF 298
+G+ QS GW HY +H PEPHI+LF
Sbjct: 79 LGITQSLGWEHYEVHEPEPHILLF 102
>gb|AAW43955.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_571262.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
Length = 124
Score = 80.9 bits (198), Expect = 5e-14
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YS +Y +D +E+RHV++P + + +P + +E WR IG++QS GW Y H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83
Query: 284 HIMLFRRPINY 316
H++LFRRP NY
Sbjct: 84 HVLLFRRPKNY 94
>gb|EAL20026.1| hypothetical protein CNBF3520 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 124
Score = 80.9 bits (198), Expect = 5e-14
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YS +Y +D +E+RHV++P + + +P + +E WR IG++QS GW Y H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83
Query: 284 HIMLFRRPINY 316
H++LFRRP NY
Sbjct: 84 HVLLFRRPKNY 94
>ref|XP_890349.1| PREDICTED: similar to Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid 1334) [Mus musculus]
Length = 222
Score = 78.6 bits (192), Expect = 2e-13
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +2
Query: 146 YRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPI 310
YRHV+L ++AKL+PK L SE E R +G+ QS+GW+HY IH PEPH++LF+RP+
Sbjct: 162 YRHVMLLKDIAKLIPKTPLASEYELRNLGIPQSQGWLHYMIHEPEPHVLLFQRPL 216
>ref|XP_645589.1| hypothetical protein DDB0216882 [Dictyostelium discoideum AX4]
gb|AAO51607.1| similar to putative protein involved in 60S ribosome subunit
biogenesis. [Schizosaccharomyces pombe] [Dictyostelium
discoideum]
gb|EAL71685.1| hypothetical protein DDB0216882 [Dictyostelium discoideum]
Length = 229
Score = 78.2 bits (191), Expect = 3e-13
Identities = 31/53 (58%), Positives = 45/53 (84%)
Frame = +2
Query: 149 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRP 307
+HV+LP E++ L+P++ LL+E+E R +G++QS GW HYA H+PEPHI+LFRRP
Sbjct: 6 KHVILPSEISSLIPRDVLLTEDECRKLGIRQSDGWEHYANHKPEPHILLFRRP 58
>dbj|BAE65494.1| unnamed protein product [Aspergillus oryzae]
Length = 124
Score = 77.0 bits (188), Expect = 7e-13
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 18/94 (19%)
Frame = +2
Query: 77 DREALVD-MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRA 226
+RE L + + I YS +Y DD +EYRHV LP + K +P + +LL E EWRA
Sbjct: 19 ERERLDEFIDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRA 78
Query: 227 IGVQQSR--------GWVHYAIHRPEPHIMLFRR 304
+G+ QS GW HY +H PEPHI+LF++
Sbjct: 79 LGITQSSNFTDGQSLGWEHYEVHEPEPHILLFKQ 112
>ref|XP_766710.1| hypothetical protein TP01_1189 [Theileria parva strain Muguga]
gb|EAN34427.1| hypothetical protein TP01_1189 [Theileria parva]
Length = 135
Score = 52.0 bits (123), Expect = 2e-05
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPK-----NRLLSENEWRAIGVQQSRGWVHY 262
+ IQYS K + R V LP E L+ RLLSE+EWR +G++ S+GW H
Sbjct: 56 INNIQYSPKITHSNCQIRCVTLPREHPVLVGGLDGYGTRLLSESEWRKLGIKMSKGWTHS 115
Query: 263 AIHRPEPHIMLFR 301
E HI++F+
Sbjct: 116 GYSPYESHILIFQ 128
>ref|XP_899147.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2
[Mus musculus]
Length = 155
Score = 48.9 bits (115), Expect = 2e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENE 217
QI YS+KYF++ YEY +V+LP E++K +PK L+SE E
Sbjct: 118 QIYYSDKYFNEYYEYLNVMLPRELSKQVPKTHLMSEEE 155
>gb|EAQ93474.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 113
Score = 47.4 bits (111), Expect = 6e-04
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQ 241
I YS +Y D YEYRHV LP + K +P + +LL E+EWR +G+ Q
Sbjct: 36 IHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHDKAKGTLKLLWEDEWRGMGITQ 89
>emb|CAI75479.1| hypothetical protein [Theileria annulata]
ref|XP_954955.1| hypothetical protein TA03630 [Theileria annulata strain Ankara]
Length = 559
Score = 41.2 bits (95), Expect = 0.043
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPPE-------VAKLLPKN-----------RLLSENEW-R 223
G I YS K+ DD Y YR +VL E ++K PKN RLL+ +E
Sbjct: 471 GHIIYSPKFQDDKYMYRFMVLTSEAQRQVEKLSKTSPKNGFNVGLSAGGKRLLTYHEIVH 530
Query: 224 AIGVQQSRGWVHYAIHRPEPHIMLFRRPI 310
+G++ S GW H+ + ++ R+P+
Sbjct: 531 TLGIKMSPGWHHFLYFKNVQKELILRKPL 559
>ref|XP_763284.1| hypothetical protein TP03_0266 [Theileria parva strain Muguga]
gb|EAN31001.1| hypothetical protein TP03_0266 [Theileria parva]
Length = 559
Score = 41.2 bits (95), Expect = 0.043
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPPE-------VAKLLPKN-----------RLLSENEW-R 223
G I YS K+ DD Y YR +VL E ++K PKN RLL+ +E
Sbjct: 471 GHIIYSPKFQDDKYMYRFMVLTNEAQRQVEKLSKTSPKNGFNIGLSAGGKRLLTYHEIVH 530
Query: 224 AIGVQQSRGWVHYAIHRPEPHIMLFRRPI 310
+G++ S GW H+ + ++ R+P+
Sbjct: 531 TLGIKMSPGWHHFLYFKNTQKELILRKPL 559
>ref|XP_763108.1| hypothetical protein TP03_0089 [Theileria parva strain Muguga]
gb|EAN30825.1| hypothetical protein TP03_0089 [Theileria parva]
Length = 327
Score = 38.5 bits (88), Expect = 0.28
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPP----EVAKLL--PKNRLLSENE-WRAIGVQQSRGWVH 259
G + YS ++ DD Y YR+V+L E +LL K+ LL+E++ R + + S GW H
Sbjct: 251 GDVYYSPRFQDDKYIYRYVILTKGVRNEAYRLLKQSKSYLLTEHQIIRELCIDLSPGWEH 310
Query: 260 YAIHRPEPHIMLFRRPI 310
+ + + ++ RR +
Sbjct: 311 FMLFKNRLDELILRRKL 327
>emb|CAI72903.1| cyclin-dependent kinase regulatory subunit, putative [Theileria
annulata]
ref|XP_953581.1| cyclin-dependent kinase regulatory subunit [Theileria annulata
strain Ankara]
Length = 53
Score = 38.1 bits (87), Expect = 0.37
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 197 RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 304
RLL E EW+ G+Q S W+H E HI++F++
Sbjct: 16 RLLKEYEWKQFGIQISNEWIHIGYSPYELHILIFQK 51
>ref|XP_730271.1| hypothetical protein PY02394 [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA21836.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 308
Score = 37.0 bits (84), Expect = 0.82
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPPEVAKLLPK-----NRLLSEN-EWRAIGVQQSRGWVHY 262
G + YS Y DD Y YRH++L V + K N L+E+ + + +GW H+
Sbjct: 217 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKKVRRTNAFLTEHCIINELQIDIGKGWKHF 276
Query: 263 AIHRPEPHIMLFRR 304
I+ + ++ R+
Sbjct: 277 MIYDGKIRELILRK 290
>ref|XP_679931.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAH95196.1| conserved hypothetical protein [Plasmodium berghei]
Length = 263
Score = 37.0 bits (84), Expect = 0.82
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPPEVAKLLPK-----NRLLSEN-EWRAIGVQQSRGWVHY 262
G + YS Y DD Y YRH++L V + K N L+E+ + + +GW H+
Sbjct: 172 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKKVRRTNAFLTEHCIINELQIDIGKGWKHF 231
Query: 263 AIHRPEPHIMLFRR 304
I+ + ++ R+
Sbjct: 232 MIYDGKIRELILRK 245
>ref|XP_738753.1| hypothetical protein [Plasmodium chabaudi chabaudi]
emb|CAH75382.1| conserved hypothetical protein [Plasmodium chabaudi]
Length = 281
Score = 37.0 bits (84), Expect = 0.82
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +2
Query: 101 GQIQYSEKYFDDTYEYRHVVLPPEVAKLLPK-----NRLLSE----NEWRAIGVQQSRGW 253
G + YS Y DD Y YRH++L V + K N L+E NE + + +GW
Sbjct: 190 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKTVRRTNAFLTEQCIINE---LQIDIGKGW 246
Query: 254 VHYAIHRPEPHIMLFRR 304
H+ I+ + ++ R+
Sbjct: 247 KHFMIYDGKIRELILRK 263
>emb|CAD51917.1| hypothetical protein [Plasmodium falciparum 3D7]
ref|NP_704774.1| hypothetical protein [Plasmodium falciparum 3D7]
Length = 357
Score = 34.3 bits (77), Expect = 5.3
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 89 LVDMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEW-------RAIGVQQSR 247
+ G + YS Y D+ Y YRH++L V + +N++ N + + + +
Sbjct: 262 ITSRGPVCYSALYRDNKYVYRHIILSDNV-RQYAENKVRKTNAYLTEQCIVNELQIDIGK 320
Query: 248 GWVHYAIHRPEPHIMLFRR 304
GW H+ I+ + ++ R+
Sbjct: 321 GWKHFMIYDGKLRELILRK 339
>gb|AAN48153.1| hypothetical protein LA_0954 [Leptospira interrogans serovar Lai
str. 56601]
ref|NP_711135.1| hypothetical protein LA0954 [Leptospira interrogans serovar Lai
str. 56601]
Length = 441
Score = 33.9 bits (76), Expect = 6.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 550 HMAVPSQEFPRTQGTHQQIDQLHPKFPTNSIEELINRTATPLLE 419
H+ +E+P T HQ++DQL K P ++ + ++ PLL+
Sbjct: 396 HILKIFEEYPNTSSLHQKLDQLFSKIPDATLRKKLSDLFLPLLQ 439
>ref|XP_679197.1| hypothetical protein [Plasmodium berghei strain ANKA]
emb|CAI04369.1| conserved hypothetical protein [Plasmodium berghei]
Length = 839
Score = 33.9 bits (76), Expect = 6.9
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = -1
Query: 701 HNRLNMISVLLTRSHHYKDHVKQIKYHPCMSAILITVNT*Y*ENGHGNSLTHGSSFTGIS 522
HN N +++ HH+ + + + +S ++ N Y N H N+ ++ I
Sbjct: 219 HNDRNNLNLYNNSPHHHSLNNNNMNHINNLSKVIRDNNGVYLHNNHSNN----NNANSIY 274
Query: 521 TNTRHTP--ANRPTTPEVSN*QHRGIDQQN 438
N H P N PT SN H I+ N
Sbjct: 275 NNNMHMPNNPNNPTNNHASNNDHNNINYLN 304
>gb|AAY29233.1| maturase K [Araeococcus goeldianus]
Length = 512
Score = 33.5 bits (75), Expect = 9.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 588 HIVLRKWAW*QPNTWQ-FLHRNFHEHKAHTSKSTNYTRSF 472
H++++KW W N WQ + H H+ H ++ +NY+ F
Sbjct: 297 HLLMKKWKWYLVNLWQYYFHFWSQPHRIHINQLSNYSFYF 336
>gb|AAY29272.1| maturase K [Aechmea distichantha var. glaziovii]
Length = 511
Score = 33.5 bits (75), Expect = 9.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 588 HIVLRKWAW*QPNTWQ-FLHRNFHEHKAHTSKSTNYTRSF 472
H++++KW W N WQ + H H+ H ++ +NY+ F
Sbjct: 297 HLLMKKWKWYLVNLWQYYFHFWSQPHRIHINQLSNYSFYF 336
>gb|AAY29237.1| maturase K [Ochagavia elegans]
Length = 511
Score = 33.5 bits (75), Expect = 9.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 588 HIVLRKWAW*QPNTWQ-FLHRNFHEHKAHTSKSTNYTRSF 472
H++++KW W N WQ + H H+ H ++ +NY+ F
Sbjct: 297 HLLMKKWKWYLVNLWQYYFHFWSQPHRIHINQLSNYSFYF 336
>gb|AAW66586.1| maturase [Pabstia jugosa]
Length = 437
Score = 33.5 bits (75), Expect = 9.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 585 IVLRKWAW*QPNTWQ-FLHRNFHEHKAHTSKSTNYTRSF 472
I+++KW + N WQ + H FH ++ H K NY+ SF
Sbjct: 259 ILMKKWKFHLVNFWQSYFHFWFHPYRIHIKKLPNYSFSF 297
>gb|AAW66554.1| maturase [Chondroscaphe escobariana]
Length = 437
Score = 33.5 bits (75), Expect = 9.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 585 IVLRKWAW*QPNTWQ-FLHRNFHEHKAHTSKSTNYTRSF 472
I+++KW + N WQ + H FH ++ H K NY+ SF
Sbjct: 259 ILMKKWKFHLVNFWQSYFHFWFHPYRIHIKKLPNYSFSF 297
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,483,935,025
Number of Sequences: 3454138
Number of extensions: 28870441
Number of successful extensions: 79865
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 76634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79830
length of database: 1,185,965,366
effective HSP length: 127
effective length of database: 747,289,840
effective search space used: 98642258880
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)