BLASTN 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QCS9f07.yg.2.1 (394 letters) Database: mais_NCBI.fasta 836,351 sequences; 669,372,029 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|71433670|gb|DR814720.1|DR814720 ZM_BFb0044I03.f ZM_BFb Zea ma... 757 0.0 gi|74246398|gb|DT654312.1|DT654312 ZM_BFb0127K21.f ZM_BFb Zea ma... 749 0.0 gi|78114569|gb|DV532957.1|DV532957 ZM_BFb0223N15.f ZM_BFb Zea ma... 749 0.0 gi|82775233|emb|AM162281.1| Zea mays mRNA for 3-alpha-L-fucosylt... 678 0.0 gi|82775233|emb|AM162281.1| Zea mays mRNA for 3-alpha-L-fucosylt... 678 0.0 gi|71758658|gb|DR956595.1|DR956595 ZM_BFb0053J12.f ZM_BFb Zea ma... 662 0.0 gi|78118404|gb|DV536790.1|DV536790 ZM_BFb0229H01.f ZM_BFb Zea ma... 662 0.0 gi|87153373|gb|DY398162.1|DY398162 III-952-8A-H06.M13-R UGIII-Re... 646 0.0 gi|76934643|gb|DV173959.1|DV173959 ZM_BFb0177E06.f ZM_BFb Zea ma... 640 0.0 gi|88753752|gb|DY537893.1|DY537893 ZM_BFb0281D10.f ZM_BFb Zea ma... 638 0.0 gi|50334240|gb|CO529366.1|CO529366 3530_1_194_1_B02.x_1 3530 - F... 593 e-168 gi|78112247|gb|DV530641.1|DV530641 ZM_BFb0220H24.f ZM_BFb Zea ma... 472 e-131 gi|91877306|gb|EB407263.1|EB407263 ZM_BFb0319F17.f ZM_BFb Zea ma... 442 e-122 gi|19058822|gb|BM737489.1|BM737489 952056E02.y1 952 - BMS tissue... 367 e-100 gi|7136101|gb|AW498425.1|AW498425 660047H09.x1 660 - Mixed stage... 353 1e-95 gi|22490612|gb|BU050535.1|BU050535 1111029H06.y1 1111 - Unigene ... 323 9e-87 gi|91876751|gb|EB406708.1|EB406708 ZM_BFb0317J05.f ZM_BFb Zea ma... 188 4e-46 gi|37392392|gb|CF633445.1|CF633445 zmrws48_0B20-015-h11.s3 zmrws... 36 3.2 gi|91176476|gb|AC184838.1| Zea mays chromosome UNK clone CH201-1... 36 3.2 gi|90855897|gb|AC184146.1| Zea mays chromosome UNK clone CH201-1... 36 3.2 gi|85861425|gb|AC177915.1| Zea mays chromosome UNK clone CH201-1... 36 3.2 >gi|71433670|gb|DR814720.1|DR814720 ZM_BFb0044I03.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 722 Score = 757 bits (382), Expect = 0.0 Identities = 391/394 (99%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 289 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 349 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 409 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 469 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tgctggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgaa 529 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 589 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||||||||| ||||||||||| Sbjct: 590 gagctttgaaagaatcagatggcccatcatactt 623 >gi|74246398|gb|DT654312.1|DT654312 ZM_BFb0127K21.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 776 Score = 749 bits (378), Expect = 0.0 Identities = 390/394 (98%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 293 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 353 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 atttaccgagcactgcaaattccaaggctcccagtgttaactggcccgatctcatataaa 413 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 473 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 474 tgctggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgaa 533 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 593 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||||||||| ||||||||||| Sbjct: 594 gagctttgaaagaatcagatggcccatcatactt 627 >gi|78114569|gb|DV532957.1|DV532957 ZM_BFb0223N15.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 791 Score = 749 bits (378), Expect = 0.0 Identities = 390/394 (98%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 85 acaaagcctgacgttgcgttaaaccgactgggtaaattctgtatagtttcaggtcatccc 144 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 204 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 264 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 324 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 325 tgctggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgaa 384 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 444 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||||||||| ||||||||||| Sbjct: 445 gagctttgaaagaatcagatggcccatcatactt 478 >gi|82775233|emb|AM162281.1| Zea mays mRNA for 3-alpha-L-fucosyltransferase (core3ft gene) Length = 1937 Score = 678 bits (342), Expect = 0.0 Identities = 381/394 (96%) Strand = Plus / Minus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1656 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 1597 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 1537 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1536 atttaccgagcactgcggattccaaggctcccagtgttaactggcctgatctcatgtaaa 1477 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 1476 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 1417 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1416 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 1357 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 1297 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||| ||||||||||| Sbjct: 1296 gagctttgaaagaatcggatggcccatcatactt 1263 >gi|82775233|emb|AM162281.1| Zea mays mRNA for 3-alpha-L-fucosyltransferase (core3ft gene) Length = 1937 Score = 678 bits (342), Expect = 0.0 Identities = 381/394 (96%) Strand = Plus / Minus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1656 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 1597 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 1537 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1536 atttaccgagcactgcggattccaaggctcccagtgttaactggcctgatctcatgtaaa 1477 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 1476 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 1417 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1416 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 1357 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 1297 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||| ||||||||||| Sbjct: 1296 gagctttgaaagaatcggatggcccatcatactt 1263 >gi|71758658|gb|DR956595.1|DR956595 ZM_BFb0053J12.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 705 Score = 662 bits (334), Expect = 0.0 Identities = 379/394 (96%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 260 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 319 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 379 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 380 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 439 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 440 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 499 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 500 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 559 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 560 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcaataa 619 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||||||||||||||| Sbjct: 620 gagctttgaaagaatcggatggaccatcatactt 653 >gi|78118404|gb|DV536790.1|DV536790 ZM_BFb0229H01.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 805 Score = 662 bits (334), Expect = 0.0 Identities = 379/394 (96%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 260 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 319 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 379 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 380 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 439 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 440 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 499 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 500 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 559 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 560 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcaataa 619 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||||||||||||||| Sbjct: 620 gagctttgaaagaatcggatggaccatcatactt 653 >gi|87153373|gb|DY398162.1|DY398162 III-952-8A-H06.M13-R UGIII-Reseq Zea mays cDNA, mRNA sequence Length = 713 Score = 646 bits (326), Expect = 0.0 Identities = 377/394 (95%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 270 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 329 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 389 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 390 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 449 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 450 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 509 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 510 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 569 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 570 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcaataa 629 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 ||||||| ||||||| ||||||||||||||||| Sbjct: 630 gagcttttgaagaatcggatggaccatcatactt 663 >gi|76934643|gb|DV173959.1|DV173959 ZM_BFb0177E06.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 666 Score = 640 bits (323), Expect = 0.0 Identities = 378/395 (95%), Gaps = 1/395 (0%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 263 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 322 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 382 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 383 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 442 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 443 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 502 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 503 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 562 Query: 301 tcttggtagcaatatgtatacaaagacgac-aagatgaatgaaccgctgccatgtcgata 359 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 563 tcttggtagcaatatgtatacaaagacgacaaagatgaatgaaccgctgccatgtcaata 622 Query: 360 agagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||||||||||||||| Sbjct: 623 agagctttgaaagaatacgatggaccatcatactt 657 >gi|88753752|gb|DY537893.1|DY537893 ZM_BFb0281D10.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 696 Score = 638 bits (322), Expect = 0.0 Identities = 376/394 (95%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 257 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 316 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 376 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 377 atttaccgagcactgcggattccaaggctcccaaagttaactggcctgatctcatgtaaa 436 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| Sbjct: 437 tgctctctgacttaaaccgccctctctctcggataaataaatggtaaattgttccctttt 496 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||| | |||||||||||||||||||||||||||||||||||||| | Sbjct: 497 tggtggaacagctacaaagacgatttgtaaattttggagtcctttcctcctttaaatgga 556 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 557 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcaataa 616 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 |||||||||||||||| ||||||||||||||||| Sbjct: 617 gagctttgaaagaatcggatggaccatcatactt 650 >gi|50334240|gb|CO529366.1|CO529366 3530_1_194_1_B02.x_1 3530 - Full length cDNA library created by Invitrogen from multiple tissues Zea mays cDNA, mRNA sequence Length = 645 Score = 593 bits (299), Expect = e-168 Identities = 341/355 (96%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 287 acaaagcctgacgttgcgttaaaccgactgggtaaattctgtataatttcaggtcatccc 346 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 cacctctaatgctcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 406 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 407 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 466 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| Sbjct: 467 tgctctctgacttaaaccgccctctctctcggataaataagtggtaaattgttccctttt 526 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 527 tggtggaacagctacaaggacgatttgtaaattttggagtcctttcctcctttaaatgga 586 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtc 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtc 641 >gi|78112247|gb|DV530641.1|DV530641 ZM_BFb0220H24.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 698 Score = 472 bits (238), Expect = e-131 Identities = 355/394 (90%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||| |||||| ||| |||||||||||| ||||||| || ||| Sbjct: 257 acaaagcctgacgttgcgttaaaccgacggggaaaattctgtataatttcaggccacccc 316 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 | ||||||| | ||| ||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 317 cccctctaaggcccgggggcctttcatccttccaaacaggaacggggttgagggacctaa 376 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 377 atttaccgagcactgcggattccaaggctcccaaagttaactggcctgatctcatgtaaa 436 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtcccctttt 240 |||||||||||||||||| ||| |||||||| | ||| ||| || ||| ||| ||||||| Sbjct: 437 tgctctctgacttaaacccccccctctctcgaaaaaaaaaggggaaaattgttccctttt 496 Query: 241 tgctggaacagctacaaggtcgatttgtaaattttggagtcctttcctcctttaaatgaa 300 || |||||| |||||||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 497 tgggggaacacctacaaggacaatttgtaaattttggagtcctttcctcctttaaatgga 556 Query: 301 tcttggtagcaatatgtatacaaagacgacaagatgaatgaaccgctgccatgtcgataa 360 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 557 tcttggtagcaatatgtatacaaaaacgacaaaatgaatgaaccgctgccatgtcaataa 616 Query: 361 gagctttgaaagaatcagatggaccatcatactt 394 ||||||||||||||| ||||||||||||||||| Sbjct: 617 aagctttgaaagaatcggatggaccatcatactt 650 >gi|91877306|gb|EB407263.1|EB407263 ZM_BFb0319F17.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 472 Score = 442 bits (223), Expect = e-122 Identities = 235/239 (98%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 293 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 294 cacctctaatactcggtggcctttcatccttccctacaggaacgtggttgagggacctaa 353 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 413 Query: 181 tgctctctgacttaaaccgccctctctctcggataaacaagtggtaaactgtccccttt 239 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 414 tgctctctgacttaaaccgccctctctctcggaaaaaaaagtggtaaactgtccccttt 472 >gi|19058822|gb|BM737489.1|BM737489 952056E02.y1 952 - BMS tissue from Walbot Lab (reduced rRNA) Zea mays cDNA, mRNA sequence Length = 484 Score = 367 bits (185), Expect = e-100 Identities = 209/217 (96%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 266 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 325 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 cacctctaatgctcgggggcctttcatccttccatacaggaacgtggttgagggacctaa 385 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 386 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 445 Query: 181 tgctctctgacttaaaccgccctctctctcggataaa 217 ||||||||||||||||||||||||||||||||||||| Sbjct: 446 tgctctctgacttaaaccgccctctctctcggataaa 482 >gi|7136101|gb|AW498425.1|AW498425 660047H09.x1 660 - Mixed stages of anther and pollen Zea mays cDNA, mRNA sequence Length = 496 Score = 353 bits (178), Expect = 1e-95 Identities = 202/210 (96%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 281 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 340 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cacctctaatgctcgggggcctttcatccttccatacaggaacgtggttgagggacctaa 400 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 401 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 460 Query: 181 tgctctctgacttaaaccgccctctctctc 210 |||||||||||||||||||||||||||||| Sbjct: 461 tgctctctgacttaaaccgccctctctctc 490 >gi|22490612|gb|BU050535.1|BU050535 1111029H06.y1 1111 - Unigene III from Maize Genome Project Zea mays cDNA, mRNA sequence Length = 459 Score = 323 bits (163), Expect = 9e-87 Identities = 187/195 (95%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 265 acaaagcctgacgttgcgttagaccgactgggtaaattctgtataatttcaggtcatccc 324 Query: 61 cacctctaatactcggtggcctttcatccttccatacaggaacgtggttgagggacctaa 120 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 cacctctaatgctcgggggcctttcatccttccatacaggaacgtggttgagggacctaa 384 Query: 121 atttaccgagcactgcagattccaaggctcccagtgttaactggcccgatctcatataaa 180 |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 385 atttaccgagcactgcggattccaaggctcccagagttaactggcctgatctcatgtaaa 444 Query: 181 tgctctctgacttaa 195 ||||||||||||||| Sbjct: 445 tgctctctgacttaa 459 >gi|91876751|gb|EB406708.1|EB406708 ZM_BFb0317J05.f ZM_BFb Zea mays cDNA 3', mRNA sequence Length = 351 Score = 188 bits (95), Expect = 4e-46 Identities = 115/119 (96%), Gaps = 2/119 (1%) Strand = Plus / Plus Query: 1 acaaagcctgacgttgtgttagaccgactgggtaaattctgtatagtttcaggtcatccc 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 acaaagcctgacgttgcgttagaccgactgggtaaattctgtatagtttcaggtcatccc 293 Query: 61 cacctctaatactcggtggcctttcatccttccataca-ggaacgtggttgagggacct 118 ||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| Sbjct: 294 cacctctaatactcggtggcctttcatccttcc-tacagggaacggggttgagggacct 351 >gi|37392392|gb|CF633445.1|CF633445 zmrws48_0B20-015-h11.s3 zmrws48 Zea mays cDNA 3', mRNA sequence Length = 492 Score = 36.2 bits (18), Expect = 3.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 204 ctctctcggataaacaagtggt 225 ||||| |||||||||||||||| Sbjct: 377 ctctcgcggataaacaagtggt 398 >gi|91176476|gb|AC184838.1| Zea mays chromosome UNK clone CH201-151B1; ZMMBBc0151B01, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces Length = 176886 Score = 36.2 bits (18), Expect = 3.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 135 gcagattccaaggctccc 152 |||||||||||||||||| Sbjct: 167493 gcagattccaaggctccc 167510 >gi|90855897|gb|AC184146.1| Zea mays chromosome UNK clone CH201-11O11; ZMMBBc0011O11, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces Length = 228832 Score = 36.2 bits (18), Expect = 3.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 291 tttaaatgaatcttggta 308 |||||||||||||||||| Sbjct: 148104 tttaaatgaatcttggta 148121 >gi|85861425|gb|AC177915.1| Zea mays chromosome UNK clone CH201-140E2, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces Length = 174908 Score = 36.2 bits (18), Expect = 3.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 212 gataaacaagtggtaaac 229 |||||||||||||||||| Sbjct: 21907 gataaacaagtggtaaac 21924 Database: mais_NCBI.fasta Posted date: Apr 26, 2006 11:51 AM Number of letters in database: 669,372,029 Number of sequences in database: 836,351 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 113,681 Number of Sequences: 836351 Number of extensions: 113681 Number of successful extensions: 7375 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7342 Number of HSP's gapped (non-prelim): 31 length of query: 394 length of database: 669,372,029 effective HSP length: 19 effective length of query: 375 effective length of database: 653,481,360 effective search space: 245055510000 effective search space used: 245055510000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)