BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= QCS9f07.yg.2.1 (562 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sptr|Q9ST51|Q9ST51 Fuct c3 protein. 189 2e-47 sw|Q9LJK1|FU11_ARATH Glycoprotein 3-alpha-L-fucosyltransferase A... 184 4e-46 sptrnew|AAO00930|AAO00930 Putative fucosyltransferase. 179 2e-44 sw|Q9FX97|FU12_ARATH Putative fucosyltransferase-like protein (F... 179 2e-44 sptr|Q8L5D1|Q8L5D1 Alpha 1,3-fucosyltransferase (Fragment). 170 1e-41 sptr|Q93WS0|Q93WS0 Alpha1,3-fucosyltransferase (Fragment). 71 9e-12 sptr|Q8XKG7|Q8XKG7 Hypothetical protein CPE1429. 32 4.5
>sptr|Q9ST51|Q9ST51 Fuct c3 protein. Length = 510 Score = 189 bits (479), Expect = 2e-47 Identities = 90/133 (67%), Positives = 105/133 (78%) Frame = -1 Query: 400 RXKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYH 221 R KY+GPSDSFKAL+DMAAVHSSCRLCIH+AT KEE P RPC C+ TVYH Sbjct: 350 RWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENNPSLKRRPCKCTRGPETVYH 409 Query: 220 LFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLY 41 +++RERGRF+ ESIY+RS LTL A+++AV+ KF SLN VPVWK ERP IRGG LKLY Sbjct: 410 IYVRERGRFEMESIYLRSSNLTLNAVKAAVVLKFTSLNLVPVWKTERPEVIRGGSALKLY 469 Query: 40 RIYPVGLTQRQAL 2 +IYP+GLTQRQAL Sbjct: 470 KIYPIGLTQRQAL 482 Score = 47.0 bits (110), Expect = 1e-04 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = -3 Query: 551 CXXXXXXGFSASKTPDATXXIAXDPSVEGILRSMESSQYYSENNIDVAR 405 C GFS + PDA + ILRSMES++YY+ENNI +AR Sbjct: 133 CSVGCKFGFSGDRKPDAAFGLPQPSGTASILRSMESAEYYAENNIAMAR 181 >sw|Q9LJK1|FU11_ARATH Glycoprotein 3-alpha-L-fucosyltransferase A (EC 2.4.1.214) (Core alpha-(1,3)-fucosyltransferase) (Fuc-T C3) (FucTA) (FucT1) (AtFUT11). Length = 501 Score = 184 bits (468), Expect = 4e-46 Identities = 86/133 (64%), Positives = 107/133 (80%) Frame = -1 Query: 400 RXKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYH 221 R K++GPSDSFKALIDMAAVHSSCRLCI +AT+I +EE++P+F RPC C+ TVYH Sbjct: 341 RWKHEGPSDSFKALIDMAAVHSSCRLCIFVATRIREQEEKSPEFKRRPCKCTRGSETVYH 400 Query: 220 LFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLY 41 L++RERGRF ESI+++ G LTL ALESAVL KF SL + P+WK ERP S+RG L+++ Sbjct: 401 LYVRERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVH 460 Query: 40 RIYPVGLTQRQAL 2 IYP+GLTQRQAL Sbjct: 461 GIYPIGLTQRQAL 473 Score = 48.9 bits (115), Expect = 4e-05 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = -3 Query: 551 CXXXXXXGFSASKTPDATXXIAXDPSVEGILRSMESSQYYSENNIDVAR 405 C GF++ K PDA ++ P I+RSMES+QYY ENN+ AR Sbjct: 124 CSVDCVMGFTSDKKPDAAFGLSHQPGTLSIIRSMESAQYYQENNLAQAR 172 >sptrnew|AAO00930|AAO00930 Putative fucosyltransferase. Length = 513 Score = 179 bits (454), Expect = 2e-44 Identities = 84/134 (62%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = -1 Query: 400 RXKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCS-SKKGTVY 224 R KY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +P F RPC CS TVY Sbjct: 352 RWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEESPNFKKRPCKCSRGGSDTVY 411 Query: 223 HLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKL 44 H+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +LK+ Sbjct: 412 HVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKI 471 Query: 43 YRIYPVGLTQRQAL 2 +RIYP+GLTQRQAL Sbjct: 472 HRIYPLGLTQRQAL 485 Score = 46.2 bits (108), Expect = 2e-04 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = -3 Query: 551 CXXXXXXGFSASKTPDATXXIAXDPSVEGILRSMESSQYYSENNIDVAR 405 C G S+ KTPDA + P I+RSMES+QYY EN++ AR Sbjct: 135 CSVDCTFGDSSGKTPDAAFGLGQKPGTLSIIRSMESAQYYPENDLAQAR 183 >sw|Q9FX97|FU12_ARATH Putative fucosyltransferase-like protein (FucTB) (FucT2) (AtFUT12). Length = 513 Score = 179 bits (454), Expect = 2e-44 Identities = 84/134 (62%), Positives = 106/134 (79%), Gaps = 1/134 (0%) Frame = -1 Query: 400 RXKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCS-SKKGTVY 224 R KY+GPSDSFKAL+DMAAVHSSCRLCI +AT++ +EE +P F RPC CS TVY Sbjct: 352 RWKYEGPSDSFKALVDMAAVHSSCRLCIFLATRVREQEEESPNFKKRPCKCSRGGSDTVY 411 Query: 223 HLFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKL 44 H+F+RERGRF+ ES+++R +T ALESAVL KF+SL H VWK ERP +++G +LK+ Sbjct: 412 HVFVRERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKI 471 Query: 43 YRIYPVGLTQRQAL 2 +RIYP+GLTQRQAL Sbjct: 472 HRIYPLGLTQRQAL 485 Score = 46.2 bits (108), Expect = 2e-04 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = -3 Query: 551 CXXXXXXGFSASKTPDATXXIAXDPSVEGILRSMESSQYYSENNIDVAR 405 C G S+ KTPDA + P I+RSMES+QYY EN++ AR Sbjct: 135 CSVDCTFGDSSGKTPDAAFGLGQKPGTLSIIRSMESAQYYPENDLAQAR 183 >sptr|Q8L5D1|Q8L5D1 Alpha 1,3-fucosyltransferase (Fragment). Length = 418 Score = 170 bits (430), Expect = 1e-41 Identities = 82/133 (61%), Positives = 104/133 (78%), Gaps = 2/133 (1%) Frame = -1 Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERT-PKFTNRPCSCSSKKG-TVYH 221 K++GPSDSF AL+DMAAVHSSCRLCI +ATK LKEE PK RPC C+SK G T+YH Sbjct: 261 KFNGPSDSFLALVDMAAVHSSCRLCIFVATKSRLKEEAAAPK---RPCKCTSKSGSTLYH 317 Query: 220 LFIRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLY 41 L++RERGRF+ ES+++ +L+L L+ V+ KF +L HVP+WK ERP IRG DL++Y Sbjct: 318 LYVRERGRFEMESVFIEGSKLSLAHLKQVVVDKFTALKHVPIWKTERPEVIRGNSDLRIY 377 Query: 40 RIYPVGLTQRQAL 2 +IYPVGLTQR+AL Sbjct: 378 KIYPVGLTQREAL 390 Score = 31.6 bits (70), Expect = 5.9 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -3 Query: 506 DATXXIAXDPSVEGILRSMESSQYYSENNIDVAR 405 DA PS +LRSMESS Y+ EN+I AR Sbjct: 55 DAEFGYGDSPSALLVLRSMESSAYFPENDIVWAR 88 >sptr|Q93WS0|Q93WS0 Alpha1,3-fucosyltransferase (Fragment). Length = 219 Score = 70.9 bits (172), Expect = 9e-12 Identities = 31/42 (73%), Positives = 37/42 (88%) Frame = -1 Query: 400 RXKYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTP 275 R KY+GPSDSFKAL+DMA VHSSCRLCIH+A+K KEE++P Sbjct: 177 RWKYEGPSDSFKALVDMAXVHSSCRLCIHLASKSREKEEKSP 218 >sptr|Q8XKG7|Q8XKG7 Hypothetical protein CPE1429. Length = 513 Score = 32.0 bits (71), Expect = 4.5 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = -1 Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVY 224 KYD P+D F+ L D+ V CR EE KF +C++K G Y Sbjct: 70 KYDSPTDLFRNLSDLIGVRIECRFI--------EDEEHIFKFIRTIFNCTNKDGFSY 118 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 351,102,560 Number of Sequences: 1165242 Number of extensions: 6934858 Number of successful extensions: 13705 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 13450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13699 length of database: 374,381,506 effective HSP length: 115 effective length of database: 240,378,676 effective search space used: 17066885996 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)