TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591248.2.1
(1222 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW495626.1|CW495626 fsbb001f287h17k0 Sorghum methylation... 216 2e-096
gb|CW353678.1|CW353678 fsbb001f016i12k0 Sorghum methylation... 343 4e-093
gb|CW033055.1|CW033055 104_262_10501739_115_30362 Sorghum m... 249 2e-072
gb|CW420858.1|CW420858 fsbb001f128g08k0 Sorghum methylation... 141 1e-071
gb|CW398346.1|CW398346 fsbb001f087l21k0 Sorghum methylation... 201 4e-071
gb|CW457121.1|CW457121 fsbb001f202m15k0 Sorghum methylation... 239 2e-070
gb|CW398345.1|CW398345 fsbb001f087l21f0 Sorghum methylation... 201 8e-060
gb|CW176515.1|CW176515 104_589_11158529_116_36582_071 Sorgh... 105 1e-054
gb|CW160610.1|CW160610 104_567_11149977_116_36415_043 Sorgh... 114 6e-048
gb|CW021193.1|CW021193 104_109_10409403_114_30491 Sorghum m... 105 5e-044
gb|BZ332797.1|BZ332797 hx30f11.b1 WGS-SbicolorF (JM107 adap... 131 8e-044
gb|CL182230.1|CL182230 104_393_10897285_116_31922_277 Sorgh... 140 2e-043
gb|CW091946.1|CW091946 104_454_10998859_114_33038_078 Sorgh... 148 2e-043
gb|BZ691299.1|BZ691299 SP__Ba0006A20.r SP__Ba Sorghum propi... 89 2e-041
gb|CW784947.1|CW784947 SP__Ba0006A20.r SP__Ba Sorghum propi... 89 2e-041
gb|BZ628294.1|BZ628294 ih59b05.b1 WGS-SbicolorF (DH5a methy... 116 1e-037
gb|CW214645.1|CW214645 104_646_11194123_148_37054_070 Sorgh... 121 6e-037
gb|CW232821.1|CW232821 104_685_11213026_116_37426_037 Sorgh... 89 1e-036
gb|CW435138.1|CW435138 fsbb001f151c07f0 Sorghum methylation... 97 1e-036
gb|CW228817.1|CW228817 104_668_11206590_116_37254_017 Sorgh... 97 3e-036
gb|CW266962.1|CW266962 104_736_11232720_148_35288_082 Sorgh... 145 1e-033
gb|CW352451.1|CW352451 fsbb001f014l19f0 Sorghum methylation... 135 2e-030
gb|CW352452.1|CW352452 fsbb001f014l19k0 Sorghum methylation... 135 2e-030
gb|CW461110.1|CW461110 fsbb001f208k01f0 Sorghum methylation... 73 2e-030
gb|CW451552.1|CW451552 fsbb001f191k19f0 Sorghum methylation... 122 3e-030
gb|CL187168.1|CL187168 104_402_10900699_114_32432_072 Sorgh... 50 8e-029
gb|CL187169.1|CL187169 104_402_10900699_116_32436_072 Sorgh... 129 9e-029
gb|CW197933.1|CW197933 104_622_11181944_148_36827_024 Sorgh... 98 7e-028
gb|CW197932.1|CW197932 104_622_11181944_116_36828_024 Sorgh... 98 8e-028
gb|BG357605.1|BG357605 OV2_32_A05.g1_A002 Ovary 2 (OV2) Sor... 99 1e-027
gb|BG356818.1|BG356818 OV2_10_D04.g1_A002 Ovary 2 (OV2) Sor... 99 1e-027
gb|BG273330.1|BG273330 OV2_27_A07.g1_A002 Ovary 2 (OV2) Sor... 99 1e-027
gb|BG241200.1|BG241200 OV1_39_D08.b1_A002 Ovary 1 (OV1) Sor... 99 1e-027
gb|CW072557.1|CW072557 104_325_10592334_116_30542 Sorghum m... 105 1e-027
gb|BI351334.1|BI351334 IP1_70_C06.b1_A002 Immature pannicle... 81 3e-027
gb|CW126620.1|CW126620 104_507_11112994_148_34731_041 Sorgh... 95 7e-027
gb|BG240880.1|BG240880 OV1_39_D08.g1_A002 Ovary 1 (OV1) Sor... 91 2e-025
gb|CW269733.1|CW269733 104_740_11401967_148_36230_082 Sorgh... 81 3e-025
gb|CW269732.1|CW269732 104_740_11401967_148_35316_082 Sorgh... 81 3e-025
gb|CW113155.1|CW113155 104_487_11105287_148_34549_026 Sorgh... 98 4e-025
gb|BG054060.1|BG054060 OV2_1_H08.g1_A002 Ovary 2 (OV2) Sorg... 91 4e-025
gb|CW092289.1|CW092289 104_454_10999062_114_33037_019 Sorgh... 100 5e-024
gb|CD225907.1|CD225907 CCC1_42_G11.b1_A007 Callus culture/c... 75 7e-024
gb|CW091140.1|CW091140 104_451_10997705_116_32541_033 Sorgh... 82 9e-024
gb|CW203020.1|CW203020 104_629_11185408_116_36915_056 Sorgh... 107 2e-023
gb|CW203021.1|CW203021 104_629_11185408_148_37061_056 Sorgh... 107 2e-023
gb|CW166954.1|CW166954 104_576_11153336_148_36679_032 Sorgh... 107 2e-023
gb|CW268398.1|CW268398 104_739_11401275_148_35312_014 Sorgh... 85 2e-023
gb|CW311776.1|CW311776 104_801_11470407_116_36281_058 Sorgh... 85 2e-023
gb|CW041223.1|CW041223 104_274_10506453_116_30433 Sorghum m... 85 2e-023
gb|CL159871.1|CL159871 104_350_10804575_114_31822_015 Sorgh... 85 2e-023
gb|CW041224.1|CW041224 104_274_10506453_116_30479 Sorghum m... 85 2e-023
gb|BG357518.1|BG357518 OV2_30_H04.g1_A002 Ovary 2 (OV2) Sor... 85 2e-023
gb|CW235786.1|CW235786 104_691_11215204_148_37492_010 Sorgh... 105 6e-023
gb|CX611534.1|CX611534 ANR1_25_E10.b1_A002 Anaerobic roots ... 81 4e-022
gb|CW096194.1|CW096194 104_461_11001758_116_34333_051 Sorgh... 50 1e-021
gb|CW033978.1|CW033978 104_263_10502273_114_30359 Sorghum m... 80 1e-021
gb|CW339975.1|CW339975 104_840_11485555_148_36139_066 Sorgh... 105 2e-021
gb|CW201216.1|CW201216 104_627_11184453_116_37105_095 Sorgh... 71 2e-021
>gb|CW495626.1|CW495626 fsbb001f287h17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f287h17, DNA
sequence
Length = 634
Score = 216 bits (466), Expect(3) = 2e-096
Identities = 88/100 (88%), Positives = 95/100 (95%)
Frame = -1 / +3
Query: 670 GSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARI 491
G+S+ASPVQLRRVAKRQVDYILGDNPLRMSYMVGYG R+P RIHHRASSLPSV+AHPARI
Sbjct: 333 GASAASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGPRYPLRIHHRASSLPSVSAHPARI 512
Query: 490 GCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAV 371
GCKAGAAYY SP PNPNLLVGAVVGGP++ +DAFPDARAV
Sbjct: 513 GCKAGAAYYGSPRPNPNLLVGAVVGGPSNSTDAFPDARAV 632
Score = 127 bits (273), Expect(4) = 1e-066
Identities = 52/61 (85%), Positives = 53/61 (86%)
Frame = +3 / -1
Query: 489 PIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDE 668
PIRAGCA TDGSELARWWIR G R P PTMYDIRSGLSP M*STCRLATRRSCTGDA +
Sbjct: 514 PIRAGCADTDGSELARWWIRSGYRGP*PTMYDIRSGLSPRM*STCRLATRRSCTGDAAEA 335
Query: 669 P 671
P
Sbjct: 334 P 332
Score = 89.5 bits (189), Expect(3) = 2e-096
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -1 / +2
Query: 901 KEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPG 782
+EVLMGKDEYF+SFR NADNF+C+LLPGIS HPQIQYSPG
Sbjct: 8 QEVLMGKDEYFRSFRENADNFICSLLPGISGHPQIQYSPG 127
Score = 88.6 bits (187), Expect(3) = 2e-096
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = -1 / +3
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSAS 653
GGLLFKVG+SNMQHVT LSFLLLAYSNYLSHA RVSCGS +++
Sbjct: 213 GGLLFKVGNSNMQHVTSLSFLLLAYSNYLSHADARVSCGSGASA 344
Score = 82.2 bits (173), Expect(3) = 6e-037
Identities = 36/57 (63%), Positives = 39/57 (68%)
Frame = -3 / +2
Query: 611 HTGRQPAADVVHGGXXXXXXXXXXXXRQLAAVRGGAPGADRLQGRRRLLHQPGAQPE 441
H GRQPAADVVHGG +LAAV GAPGADR+QGRRRLL QP A+PE
Sbjct: 392 HPGRQPAADVVHGGLRAAVPAADPPPGELAAVGVGAPGADRVQGRRRLLRQPEAEPE 562
Score = 73.0 bits (153), Expect(3) = 6e-037
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -3 / +1
Query: 899 GGSDGEGRVLPVLPCQRRQLHVHPPPRHLQSPPDPVLPR 783
GG+DG+GRVLPV+P +RRQLH+ PP HL+ P DPVLPR
Sbjct: 10 GGADGQGRVLPVVP*ERRQLHLQPPTGHLRPPSDPVLPR 126
Score = 70.7 bits (148), Expect(4) = 1e-066
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = +3 / -1
Query: 666 EPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPP 785
EP ETR AWLR*LE*A RR +S VTCCMLLLPTL PP
Sbjct: 331 EPQETRASAWLR*LE*ARRRKESDVTCCMLLLPTLKRRPP 212
Score = 66.6 bits (139), Expect(4) = 1e-066
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +3 / -2
Query: 783 PGEYWIWG*LEMPGRRVHMKLSALTRKDWKYSSFPIRTS 899
PGEYWI G EMPGRR+ MKLSA +R D KYSS PI TS
Sbjct: 126 PGEYWI*GWPEMPGRRLQMKLSAFSRNDRKYSSLPISTS 10
Score = 58.8 bits (122), Expect(5) = 3e-021
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +2 / -1
Query: 767 LEQQPAWGVLDLGVIGDAGEEGAHEVVGVDTEGLEVLVLPHQNLL 901
+++ WGVLDL V GDA E A EVVGV TE EVLVL HQ+LL
Sbjct: 142 VQETVTWGVLDLRVAGDAR*EAADEVVGVLTERPEVLVLAHQHLL 8
Score = 47.8 bits (98), Expect(4) = 1e-066
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / -1
Query: 369 NTARASGKASESSVGPPTTAPTSRF 443
NTARASG AS +GPPTTAPTSRF
Sbjct: 634 NTARASGNASVLLLGPPTTAPTSRF 560
Score = 39.6 bits (80), Expect(3) = 6e-037
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -3 / +2
Query: 809 SPPDPVLPRRAAVQGREQQHAARDAAVVPPAGLLQ 705
S P + R +QG +QQHAARD A++PP LLQ
Sbjct: 188 SMPLQLQHRWPPLQGGQQQHAARDVALLPPPRLLQ 292
Score = 38.6 bits (78), Expect(5) = 3e-021
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / -2
Query: 571 PPCTTSAAGCRPVC 612
PPCTTSAAGCRP C
Sbjct: 432 PPCTTSAAGCRPGC 391
Score = 30.4 bits (60), Expect(5) = 3e-021
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / -3
Query: 371 HGARXXXXXXXXXXPAHDGAHEQ 439
HG R PAHDGAH+Q
Sbjct: 632 HGPRVRERVGAVAGPAHDGAHQQ 564
Score = 28.6 bits (56), Expect(5) = 3e-021
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 722 EERQLRHVLHVAAPDLEQQ 778
EE + RHVLHVA LE++
Sbjct: 275 EEGERRHVLHVAVAHLEEE 219
Score = 23.5 bits (45), Expect(5) = 3e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 611 VVHLPLGH 634
VVHLPLGH
Sbjct: 392 VVHLPLGH 369
>gb|CW353678.1|CW353678 fsbb001f016i12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016i12, DNA
sequence
Length = 470
Score = 343 bits (743), Expect = 4e-093
Identities = 142/147 (96%), Positives = 144/147 (97%)
Frame = -1 / +2
Query: 706 NYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRAS 527
+YLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRAS
Sbjct: 26 HYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRAS 205
Query: 526 SLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTT 347
SLPSVAAHPARIGCKAGAAYY SPAPNPNLLVGAVVGGP+D SDAFPDARAVFQ SEPTT
Sbjct: 206 SLPSVAAHPARIGCKAGAAYYASPAPNPNLLVGAVVGGPSDASDAFPDARAVFQHSEPTT 385
Query: 346 YINAPLMGLLAYFSAHPNPAESGGD*K 266
YINAPLMGLLAYFSAHPNPAESGGD*K
Sbjct: 386 YINAPLMGLLAYFSAHPNPAESGGD*K 466
Score = 181 bits (390), Expect(2) = 2e-077
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +3 / -3
Query: 486 QPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADD 665
QPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSP M*STCRLATRRSCTGDADD
Sbjct: 246 QPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPRM*STCRLATRRSCTGDADD 67
Query: 666 EPHETRPPAWLR* 704
+PHETRPPAWLR*
Sbjct: 66 DPHETRPPAWLR* 28
Score = 130 bits (278), Expect(2) = 2e-077
Identities = 54/59 (91%), Positives = 57/59 (96%)
Frame = +3 / -3
Query: 267 FQSPPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPTTAPTSRF 443
F SPPDSAGLG AEK*ARRPMSGALMYVVGS+CWNTARASGKASE+S+GPPTTAPTSRF
Sbjct: 465 F*SPPDSAGLGWAEK*ARRPMSGALMYVVGSECWNTARASGKASEASLGPPTTAPTSRF 289
Score = 90.4 bits (191), Expect(3) = 1e-022
Identities = 40/58 (68%), Positives = 42/58 (72%)
Frame = +2 / -2
Query: 266 FSVAARLGWVGMCREVGEEAHERRVDVRGGLGLLEHGARXXXXXXXXXXPAHDGAHEQ 439
F VA LG VG+ REVGEEAHERRVDVRGGLG+LEHGAR PA DGAHEQ
Sbjct: 466 FLVAPGLGRVGVGREVGEEAHERRVDVRGGLGMLEHGARVGEGVGGVAGPADDGAHEQ 293
Score = 70.3 bits (147), Expect(3) = 2e-022
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +1
Query: 530 QLAAVRGGAPGADRLQGRRRLLHQPGAQPE 441
QLAAVRGGAPGADRLQGRRRLL QPGAQPE
Sbjct: 202 QLAAVRGGAPGADRLQGRRRLLRQPGAQPE 291
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 624 GRWTTYWATTRCGCR 580
GRWTT WATTRCGCR
Sbjct: 108 GRWTTSWATTRCGCR 152
Score = 35.4 bits (71), Expect(3) = 1e-022
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 574 PCTTSAAGCRPVC 612
PCTTSAAGCRP C
Sbjct: 158 PCTTSAAGCRPGC 120
Score = 31.3 bits (62), Expect(3) = 2e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 323 PPRLLLGTSQPSRVGRRLK 267
PPRLLLG QP RV RL+
Sbjct: 409 PPRLLLGPPQPGRVRGRLE 465
Score = 23.5 bits (45), Expect(3) = 1e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -2
Query: 611 VVHLPLGH 634
VVHLPLGH
Sbjct: 121 VVHLPLGH 98
>gb|CW033055.1|CW033055 104_262_10501739_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501739, DNA
sequence
Length = 498
Score = 249 bits (539), Expect(2) = 2e-072
Identities = 106/130 (81%), Positives = 109/130 (83%)
Frame = -1 / +3
Query: 577 MVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDS 398
MVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYY SPAPNPNLLVGAVVGGP+D S
Sbjct: 3 MVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYASPAPNPNLLVGAVVGGPSDAS 182
Query: 397 DAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*KKPRESER*RTHARAWV 218
DAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*K +* R W
Sbjct: 183 DAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*KA**GEGK*EIDQRVWA 362
Query: 217 F*MGFGLSCS 188
+ G S
Sbjct: 363 WVFWMGFGLS 392
Score = 133 bits (285), Expect(3) = 6e-057
Identities = 59/85 (69%), Positives = 64/85 (75%)
Frame = +3 / -3
Query: 189 EQDKPKPI*NTQARACVRHLSLSLGFFQSPPDSAGLGCAEK*ARRPMSGALMYVVGSDCW 368
++ KP R + H F SPPDSAGLG AEK*ARRPMSGALMYVVGSDCW
Sbjct: 391 DKPKPIQNTQAHTRWSISHFPSPY*AF*SPPDSAGLGWAEK*ARRPMSGALMYVVGSDCW 212
Query: 369 NTARASGKASESSVGPPTTAPTSRF 443
NTARASGKASE+S+GPPTTAPTSRF
Sbjct: 211 NTARASGKASEASLGPPTTAPTSRF 137
Score = 93.6 bits (198), Expect(3) = 9e-033
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +2 / -2
Query: 266 FSVAARLGWVGMCREVGEEAHERRVDVRGGLGLLEHGARXXXXXXXXXXPAHDGAHEQ 439
F VAA LG VG+ REVGEEAHERRVDVRGGLGLLEHGAR PA DGAHEQ
Sbjct: 314 FLVAAGLGRVGVGREVGEEAHERRVDVRGGLGLLEHGARVGEGVGGVAGPADDGAHEQ 141
Score = 83.1 bits (175), Expect(3) = 6e-057
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3 / -3
Query: 486 QPIRAGCAATDGSELARWWIRRGNRAPYPTM 578
QPIRAGCAATDGSELARWWIRRGNRAPYPTM
Sbjct: 94 QPIRAGCAATDGSELARWWIRRGNRAPYPTM 2
Score = 70.3 bits (147), Expect(4) = 4e-029
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / +2
Query: 530 QLAAVRGGAPGADRLQGRRRLLHQPGAQPE 441
QLAAVRGGAPGADRLQGRRRLL QPGAQPE
Sbjct: 50 QLAAVRGGAPGADRLQGRRRLLRQPGAQPE 139
Score = 45.5 bits (93), Expect(2) = 2e-072
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +1
Query: 170 VYP*FRTSSCN*LTGATPLP 111
VYP*FRTSSCN*LT ATPLP
Sbjct: 439 VYP*FRTSSCN*LTRATPLP 498
Score = 45.5 bits (93), Expect(3) = 6e-057
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 116 REWLRLTSYNYSYGTTDT 169
REWL LTSYNYSYGTTDT
Sbjct: 493 REWLWLTSYNYSYGTTDT 440
Score = 44.1 bits (90), Expect(3) = 9e-033
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 112 GKGVAPVN*LQLLVRNYGYT 171
GKGVA VN*LQLLVRNYGYT
Sbjct: 497 GKGVALVN*LQLLVRNYGYT 438
Score = 42.8 bits (87), Expect(3) = 9e-033
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / -1
Query: 178 QSGPNKTNQSPSKIPRP 228
QSGP+KTNQSPSKIPRP
Sbjct: 408 QSGPSKTNQSPSKIPRP 358
Score = 41.4 bits (84), Expect(4) = 4e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 227 GLGILDGLWFVLFGPD 180
GLGILDGLWFVL GPD
Sbjct: 359 GLGILDGLWFVLLGPD 406
Score = 37.7 bits (76), Expect(4) = 4e-029
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -2 / +3
Query: 168 VSVVPYE*L*LVNRSHSL 115
VSVVPYE*L*LVN+SHSL
Sbjct: 441 VSVVPYE*L*LVNQSHSL 494
Score = 35.9 bits (72), Expect(4) = 4e-029
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 323 PPRLLLGTSQPSRVGRRLKKA*GE*EM 243
PPRLLLG QP RV RRL+ G E+
Sbjct: 257 PPRLLLGPPQPGRVRRRLESLVGRGEV 337
>gb|CW420858.1|CW420858 fsbb001f128g08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f128g08, DNA
sequence
Length = 645
Score = 141 bits (303), Expect(3) = 1e-071
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = -1 / -2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+ GGLLF++ SNMQ+VT +FL+L Y+ YL+ A V CG + +P +LR VA+R
Sbjct: 278 QTQYTRGGLLFRLSDSNMQYVTSSAFLMLTYAKYLAFAKTTVRCGGVAVTPHRLRAVARR 99
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRAS 527
QVDY+LG NP+ MSYMVGYG R+PRRIHHRAS
Sbjct: 98 QVDYLLGSNPMGMSYMVGYGGRYPRRIHHRAS 3
Score = 97.3 bits (206), Expect(3) = 1e-071
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLH+ATR Y YI+ N VLGA ++ N FGWDNKHAG VLI+K L+ + + +
Sbjct: 512 AWLHRATRSATYLSYIQSNGAVLGADESDNTFGWDNKHAGARVLIAKSFLVQRQGALREY 333
Query: 859 RVNADNFMCTLLPG 818
+ +AD F+C+++PG
Sbjct: 332 KSHADGFICSMVPG 291
Score = 95.9 bits (203), Expect(3) = 5e-041
Identities = 50/91 (54%), Positives = 52/91 (57%)
Frame = +3 / +1
Query: 531 ARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE 710
ARWWIRRG P PTMYDI GL PS *STC AT RS G P T A R L
Sbjct: 7 ARWWIRRGYLPP*PTMYDIPIGLLPSR*STCLRATARSRCGVTATPPQRTVVLANARYLA 186
Query: 711 *ASRRNDSCVTCCMLLLPTLNSSPPGEYWIW 803
* S R VT CMLL +LNSSPP Y +W
Sbjct: 187 *VSIRKALDVTYCMLLSLSLNSSPPRVYCVW 279
Score = 72.5 bits (152), Expect(3) = 1e-071
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 1167 RAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
RA VFEFADK+RG YS+ L A VCP YC YSGYQDELL
Sbjct: 638 RAKRVFEFADKHRGAYSTGLAADVCPYYCSYSGYQDELL 522
Score = 57.0 bits (118), Expect(3) = 5e-041
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +2 / +1
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATA 1165
H WYPE* Q* GHT+A R +L* PR LSANSNT A
Sbjct: 520 HSSSSWYPE*EQ*YGHTSAARPVL*APRCLSANSNTRLA 636
Score = 55.6 bits (115), Expect(3) = 5e-041
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +3 / +1
Query: 891 RTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRVALCSHAKKNTAA 1058
R MRT PACLLS PN L S AP T L M RY VA CSHA ++++
Sbjct: 364 RNDLAMRTRAPACLLSHPNVLSDSSAPRTAPLLWM*LRYVALLVARCSHAAPHSSS 531
>gb|CW398346.1|CW398346 fsbb001f087l21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087l21, DNA
sequence
Length = 741
Score = 201 bits (434), Expect(3) = 4e-071
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+ GGLLF++ SNMQ+VT +FL+L Y+ YL+ A V CG + +P +LR VA+R
Sbjct: 156 QTQYTRGGLLFRLSDSNMQYVTSSAFLMLTYAKYLAFAKTTVRCGGVAVTPHRLRAVARR 335
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDY+LG NP+ MSYMVGYG R+PRRIHHRASSLPSVAAHP RIGC G + NP
Sbjct: 336 QVDYLLGSNPMGMSYMVGYGGRYPRRIHHRASSLPSVAAHPGRIGCSQGFTALYAGGANP 515
Query: 442 NLLVGAVVGGP 410
N+LVGAVVGGP
Sbjct: 516 NVLVGAVVGGP 548
Score = 138 bits (295), Expect(3) = 1e-043
Identities = 70/131 (53%), Positives = 73/131 (55%)
Frame = +3 / -3
Query: 411 GPPTTAPTSRFXXXXXXXXXXXXXXQPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIR 590
GPPTTAPTS F PI GCAATDGS+ ARWWIRRG P PTMYDI
Sbjct: 547 GPPTTAPTSTFGLAPPAYSAVNPCEHPILPGCAATDGSDEARWWIRRGYLPP*PTMYDIP 368
Query: 591 SGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTL 770
GL PS *STC AT RS G P T A R L * S R VT CMLL +L
Sbjct: 367 IGLLPSR*STCLRATARSRCGVTATPPQRTVVLANARYLA*VSIRKALDVTYCMLLSLSL 188
Query: 771 NSSPPGEYWIW 803
NSSPP Y +W
Sbjct: 187 NSSPPRVYCVW 155
Score = 56.5 bits (117), Expect(3) = 4e-071
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = -1 / +3
Query: 943 GWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPG 818
GWDNKHAG VLI+K L+ + + ++ +AD F+C+++PG
Sbjct: 18 GWDNKHAGARVLIAKSFLVQRQGALREYKSHADGFICSMVPG 143
Score = 51.5 bits (106), Expect(3) = 4e-071
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -1 / +3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D D FPD R + SEP TYINAPL+G LAY +
Sbjct: 534 VVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 650
Score = 43.7 bits (89), Expect(3) = 1e-043
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = +2 / -2
Query: 806 VIGDAGEEGAHEVVGVDTEGLEVLVLPHQNLL*DEDVDAGVLVVP 940
V G AG GA E VGV E + HQ L DED AGVLVVP
Sbjct: 155 VRGRAGHHGADEPVGVGLVLAERALALHQERLGDEDARAGVLVVP 21
Score = 35.4 bits (71), Expect(3) = 1e-043
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / -3
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
+*A P SGALM V GS+C + R+SG S S P T
Sbjct: 646 R*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTT 533
>gb|CW457121.1|CW457121 fsbb001f202m15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202m15, DNA
sequence
Length = 566
Score = 239 bits (516), Expect(2) = 2e-070
Identities = 102/127 (80%), Positives = 105/127 (82%)
Frame = -1 / -3
Query: 568 YGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAF 389
YGARFPRRI HRASSLPSVAAHPARIGCKAGAAYY SPAPNPNLLVGAVVGGP+D SDAF
Sbjct: 564 YGARFPRRIRHRASSLPSVAAHPARIGCKAGAAYYASPAPNPNLLVGAVVGGPSDASDAF 385
Query: 388 PDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*KKPRESER*RTHARAWVF*M 209
PDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*K +* R W +
Sbjct: 384 PDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAESGGD*KA**GEGK*EIDQRVWAWVF 205
Query: 208 GFGLSCS 188
G S
Sbjct: 204 WMGFGLS 184
Score = 133 bits (285), Expect(3) = 4e-054
Identities = 59/85 (69%), Positives = 64/85 (75%)
Frame = +3 / +2
Query: 189 EQDKPKPI*NTQARACVRHLSLSLGFFQSPPDSAGLGCAEK*ARRPMSGALMYVVGSDCW 368
++ KP R + H F SPPDSAGLG AEK*ARRPMSGALMYVVGSDCW
Sbjct: 185 DKPKPIQNTQAHTRWSISHFPSPY*AF*SPPDSAGLGWAEK*ARRPMSGALMYVVGSDCW 364
Query: 369 NTARASGKASESSVGPPTTAPTSRF 443
NTARASGKASE+S+GPPTTAPTSRF
Sbjct: 365 NTARASGKASEASLGPPTTAPTSRF 439
Score = 93.6 bits (198), Expect(3) = 2e-034
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +2 / +1
Query: 266 FSVAARLGWVGMCREVGEEAHERRVDVRGGLGLLEHGARXXXXXXXXXXPAHDGAHEQ 439
F VAA LG VG+ REVGEEAHERRVDVRGGLGLLEHGAR PA DGAHEQ
Sbjct: 262 FLVAAGLGRVGVGREVGEEAHERRVDVRGGLGLLEHGARVGEGVGGVAGPADDGAHEQ 435
Score = 70.3 bits (147), Expect(4) = 3e-031
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -3 / -2
Query: 530 QLAAVRGGAPGADRLQGRRRLLHQPGAQPE 441
QLAAVRGGAPGADRLQGRRRLL QPGAQPE
Sbjct: 526 QLAAVRGGAPGADRLQGRRRLLRQPGAQPE 437
Score = 68.9 bits (144), Expect(3) = 4e-054
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3 / +2
Query: 486 QPIRAGCAATDGSELARWWIRRGNRAPY 569
QPIRAGCAATDGSELARW IRRGNRAPY
Sbjct: 482 QPIRAGCAATDGSELARWRIRRGNRAPY 565
Score = 50.1 bits (103), Expect(3) = 4e-054
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3 / +3
Query: 96 PWSFCRQGSGSG*LVTTTRTELRIH 170
P FCR GSGSG*LVTTTRTELRIH
Sbjct: 63 PDLFCR*GSGSG*LVTTTRTELRIH 137
Score = 49.6 bits (102), Expect(2) = 2e-070
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / -1
Query: 170 VYP*FRTSSCN*LTGATPLPAK 105
VYP*FRTSSCN*LT ATPLPAK
Sbjct: 137 VYP*FRTSSCN*LTRATPLPAK 72
Score = 49.6 bits (102), Expect(3) = 2e-034
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2 / +2
Query: 107 LQAREWLRLTSYNYSYGTTDT 169
LQ REWL LTSYNYSYGTTDT
Sbjct: 74 LQVREWLWLTSYNYSYGTTDT 136
Score = 45.1 bits (92), Expect(4) = 3e-031
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -2 / -3
Query: 168 VSVVPYE*L*LVNRSHSLACKR 103
VSVVPYE*L*LVN+SHSL CK+
Sbjct: 135 VSVVPYE*L*LVNQSHSLTCKK 70
Score = 42.8 bits (87), Expect(3) = 2e-034
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / +3
Query: 178 QSGPNKTNQSPSKIPRP 228
QSGP+KTNQSPSKIPRP
Sbjct: 168 QSGPSKTNQSPSKIPRP 218
Score = 41.4 bits (84), Expect(4) = 3e-031
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / -2
Query: 227 GLGILDGLWFVLFGPD 180
GLGILDGLWFVL GPD
Sbjct: 217 GLGILDGLWFVLLGPD 170
Score = 35.9 bits (72), Expect(4) = 3e-031
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3 / -2
Query: 323 PPRLLLGTSQPSRVGRRLKKA*GE*EM 243
PPRLLLG QP RV RRL+ G E+
Sbjct: 319 PPRLLLGPPQPGRVRRRLESLVGRGEV 239
>gb|CW398345.1|CW398345 fsbb001f087l21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087l21, DNA
sequence
Length = 759
Score = 201 bits (434), Expect(2) = 8e-060
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -1 / -1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+ GGLLF++ SNMQ+VT +FL+L Y+ YL+ A V CG + +P +LR VA+R
Sbjct: 732 QTQYTRGGLLFRLSDSNMQYVTSSAFLMLTYAKYLAFAKTTVRCGGVAVTPHRLRAVARR 553
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDY+LG NP+ MSYMVGYG R+PRRIHHRASSLPSVAAHP RIGC G + NP
Sbjct: 552 QVDYLLGSNPMGMSYMVGYGGRYPRRIHHRASSLPSVAAHPGRIGCSQGFTALYAGGANP 373
Query: 442 NLLVGAVVGGP 410
N+LVGAVVGGP
Sbjct: 372 NVLVGAVVGGP 340
Score = 138 bits (295), Expect(2) = 5e-036
Identities = 70/131 (53%), Positives = 73/131 (55%)
Frame = +3 / +2
Query: 411 GPPTTAPTSRFXXXXXXXXXXXXXXQPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIR 590
GPPTTAPTS F PI GCAATDGS+ ARWWIRRG P PTMYDI
Sbjct: 341 GPPTTAPTSTFGLAPPAYSAVNPCEHPILPGCAATDGSDEARWWIRRGYLPP*PTMYDIP 520
Query: 591 SGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTL 770
GL PS *STC AT RS G P T A R L * S R VT CMLL +L
Sbjct: 521 IGLLPSR*STCLRATARSRCGVTATPPQRTVVLANARYLA*VSIRKALDVTYCMLLSLSL 700
Query: 771 NSSPPGEYWIW 803
NSSPP Y +W
Sbjct: 701 NSSPPRVYCVW 733
Score = 51.5 bits (106), Expect(2) = 8e-060
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
V G D D FPD R + SEP TYINAPL+G LAY +
Sbjct: 354 VVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 238
Score = 35.4 bits (71), Expect(2) = 5e-036
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 309 K*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
+*A P SGALM V GS+C + R+SG S S P T
Sbjct: 242 R*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTT 355
>gb|CW176515.1|CW176515 104_589_11158529_116_36582_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158529, DNA
sequence
Length = 496
Score = 105 bits (225), Expect(3) = 1e-054
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGIN 914
AWLHKA+RRREYREYIKRNEVVLGASDAINEFGWDNKHAGIN
Sbjct: 126 AWLHKASRRREYREYIKRNEVVLGASDAINEFGWDNKHAGIN 1
Score = 97.3 bits (206), Expect(3) = 4e-047
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +3 / +2
Query: 915 LMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRVALCSHAKKNTAA 1058
LMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRR ALCSHA ++++
Sbjct: 2 LMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRDALCSHAAPHSSS 145
Score = 94.1 bits (199), Expect(3) = 1e-054
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = -2 / -2
Query: 1155 VFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
VFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL
Sbjct: 240 VFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 136
Score = 79.9 bits (168), Expect(3) = 4e-047
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +2 / +2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNT 1156
H WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNT
Sbjct: 134 HSSSSWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNT 241
Score = 54.2 bits (112), Expect(3) = 1e-054
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2 / -3
Query: 1221 GSIVFRDADPAYSKRLLDRAVAV 1153
GSIVFRDADPAYSKRLLDRAVAV
Sbjct: 398 GSIVFRDADPAYSKRLLDRAVAV 330
Score = 51.9 bits (107), Expect(3) = 4e-047
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2 / +1
Query: 1148 SNTATARSRRRLE*AGSASRKTMEP 1222
S TATARSRRRLE*AGSASRKTMEP
Sbjct: 325 SLTATARSRRRLE*AGSASRKTMEP 399
>gb|CW160610.1|CW160610 104_567_11149977_116_36415_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149977, DNA
sequence
Length = 542
Score = 114 bits (244), Expect(3) = 6e-048
Identities = 41/65 (63%), Positives = 53/65 (81%)
Frame = -1 / +1
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDY+LGDNP++MSYM+GYG R+P+RIHHRASSLPS+ HP ++ CK G Y+ S + NP
Sbjct: 346 QVDYLLGDNPMKMSYMIGYGDRYPQRIHHRASSLPSIKDHPQQMVCKEGTPYFNSSSANP 525
Query: 442 NLLVG 428
N L+G
Sbjct: 526 NPLIG 540
Score = 89.0 bits (188), Expect(3) = 6e-048
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = -1 / +2
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S+ P I Y+PGG+++K G SNMQHVT +SFLLL Y+ YLS + V+CG S P+ L+
Sbjct: 74 SSSPHITYTPGGMIYKPGGSNMQHVTSISFLLLTYAKYLSKSSHTVNCGDVSVGPLTLQL 253
Query: 634 VAKRQV 617
AK+QV
Sbjct: 254 QAKKQV 271
Score = 28.1 bits (55), Expect(3) = 6e-048
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 868 QSFRVNADNFMCTLLPGISN 809
QS++ AD+F+CTL+P S+
Sbjct: 23 QSYKEFADSFICTLIPESSS 82
>gb|CW021193.1|CW021193 104_109_10409403_114_30491 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409403, DNA
sequence
Length = 426
Score = 105 bits (224), Expect(2) = 5e-044
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1 / +3
Query: 910 LISKEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPGGL 776
LI++EVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPG L
Sbjct: 48 LINQEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPGPL 182
Score = 104 bits (222), Expect(2) = 8e-033
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -3 / +2
Query: 908 HLKGGSDGEGRVLPVLPCQRRQLHVHPPPRHLQSPPDPVLPRRA 777
H GGS+GEGRVLPV+PCQRRQLHVHPPPRHLQSPPDPVLPR A
Sbjct: 50 HQSGGSNGEGRVLPVVPCQRRQLHVHPPPRHLQSPPDPVLPRSA 181
Score = 100 bits (214), Expect(2) = 2e-043
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3 / -3
Query: 774 SSPPGEYWIWG*LEMPGRRVHMKLSALTRKDWKYSSFPIRTS 899
+S PGEYWIWG*LEMPGRRVHMKLSALTR DWKYSSFPIRTS
Sbjct: 184 ASGPGEYWIWG*LEMPGRRVHMKLSALTRNDWKYSSFPIRTS 59
Score = 97.3 bits (206), Expect(2) = 2e-043
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3 / -3
Query: 666 EPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPP 785
+PHETRPPAWLR*LE*AS RNDSCVTCCMLLLPTLNSSPP
Sbjct: 424 DPHETRPPAWLR*LE*ASSRNDSCVTCCMLLLPTLNSSPP 305
Score = 96.8 bits (205), Expect(2) = 5e-044
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -1 / +3
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGS 665
GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGS
Sbjct: 306 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGS 425
Score = 91.3 bits (193), Expect(2) = 4e-026
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = +2 / -2
Query: 785 WGVLDLGVIGDAGEEGAHEVVGVDTEGLEVLVLPHQNLL*DE 910
WGVLDLGVIGDAGEEGAHEVVGVDTE LEVLVLPH NLL DE
Sbjct: 173 WGVLDLGVIGDAGEEGAHEVVGVDTERLEVLVLPH*NLLIDE 48
Score = 60.2 bits (125), Expect(2) = 8e-033
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -3 / +2
Query: 785 RRAAVQGREQQHAARDAAVVPPAGLLQ 705
RRAAVQGREQQHAARDAAVVP AGLLQ
Sbjct: 305 RRAAVQGREQQHAARDAAVVPAAGLLQ 385
Score = 51.0 bits (105), Expect(2) = 4e-026
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2 / -2
Query: 722 EERQLRHVLHVAAPDLEQQPA 784
+ERQLRHVLHVAAPDLEQQPA
Sbjct: 368 QERQLRHVLHVAAPDLEQQPA 306
>gb|BZ332797.1|BZ332797 hx30f11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx30f11 5', DNA sequence
Length = 423
Score = 131 bits (281), Expect(2) = 8e-044
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -1 / -2
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDY+LGDNP++MSYM+GYG R+P+RIHHRASSLPS+ HP ++ CK G Y+ S + NP
Sbjct: 395 QVDYLLGDNPMKMSYMIGYGDRYPQRIHHRASSLPSIKDHPQQMVCKEGTPYFNSSSANP 216
Query: 442 NLLVGAVVGGPTDD 401
N L+GAVVGGP +D
Sbjct: 215 NPLIGAVVGGPGED 174
Score = 68.0 bits (142), Expect(2) = 8e-044
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAES 281
V G + DA+ D RA F++SEPTTYINAPL+G+LAYF +PNP +
Sbjct: 197 VVGGPGEDDAYEDDRADFRKSEPTTYINAPLVGVLAYFVGNPNPGHT 57
>gb|CL182230.1|CL182230 104_393_10897285_116_31922_277 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897285, DNA
sequence
Length = 555
Score = 140 bits (301), Expect(2) = 2e-043
Identities = 58/94 (61%), Positives = 67/94 (71%)
Frame = -1 / -3
Query: 691 AGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSV 512
AG VSCG ++ L VAKRQVDYILG NP MSYMVG+GAR+PR +HHR +S+PSV
Sbjct: 553 AGAMVSCGGAAVPASALVAVAKRQVDYILGANPAAMSYMVGFGARYPRHVHHRGASMPSV 374
Query: 511 AAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
HPARI C G Y S P+ N+LVGAVVGGP
Sbjct: 373 RDHPARIACDEGFRYLHSSDPDANVLVGAVVGGP 272
Score = 97.3 bits (206), Expect(2) = 3e-023
Identities = 46/94 (48%), Positives = 51/94 (54%)
Frame = +3 / +3
Query: 411 GPPTTAPTSRFXXXXXXXXXXXXXXQPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIR 590
GPPTTAPTS Q +RAG + TDG + RW RG RAP PTM DI
Sbjct: 273 GPPTTAPTSTLASGSDECRYRNPSSQAMRAGWSRTDGMDAPRWCTCRGYRAPKPTM*DIA 452
Query: 591 SGLSPSM*STCRLATRRSCTGDADDEPHETRPPA 692
+GL+P M*STCRLAT S P ET PA
Sbjct: 453 AGLAPRM*STCRLATATSADAGTAAPPQETIAPA 554
Score = 57.4 bits (119), Expect(2) = 2e-043
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
V G D SDAF D+R F Q+EP+TY NAPL+G LA+F+A
Sbjct: 286 VVGGPDGSDAFTDSRDNFAQTEPSTYTNAPLVGALAFFAA 167
Score = 33.1 bits (66), Expect(2) = 3e-023
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3 / +3
Query: 303 AEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
A K A P SGAL+ V GS C +R S KAS S P T
Sbjct: 168 AAKKASAPTSGALV*VEGSVCAKLSRLSVKASLPSGPPTT 287
>gb|CW091946.1|CW091946 104_454_10998859_114_33038_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998859, DNA
sequence
Length = 439
Score = 148 bits (318), Expect(2) = 2e-043
Identities = 66/97 (68%), Positives = 70/97 (72%)
Frame = -1 / -1
Query: 478 GAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAH 299
G A + PAPNP +VGAVVGGP D SDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAH
Sbjct: 439 GTAL*SIPAPNPYTIVGAVVGGPRDASDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAH 260
Query: 298 PNPAESGGD*KKPRESER*RTHARAWVF*MGFGLSCS 188
PNPAESGGD*K +* R W + G S
Sbjct: 259 PNPAESGGD*KA**GEGK*EIDQRVWAWVFWMGFGLS 149
Score = 126 bits (270), Expect(2) = 5e-037
Identities = 56/82 (68%), Positives = 61/82 (74%)
Frame = +3 / +3
Query: 189 EQDKPKPI*NTQARACVRHLSLSLGFFQSPPDSAGLGCAEK*ARRPMSGALMYVVGSDCW 368
++ KP R + H F SPPDSAGLG AEK*ARRPMSGALMYVVGSDCW
Sbjct: 150 DKPKPIQNTQAHTRWSISHFPSPY*AF*SPPDSAGLGWAEK*ARRPMSGALMYVVGSDCW 329
Query: 369 NTARASGKASESSVGPPTTAPT 434
NTARASGKASE+S+GPPTTAPT
Sbjct: 330 NTARASGKASEASLGPPTTAPT 395
Score = 84.5 bits (178), Expect(3) = 1e-031
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = +2 / +2
Query: 266 FSVAARLGWVGMCREVGEEAHERRVDVRGGLGLLEHGARXXXXXXXXXXPAHDGAHEQ 439
F VAA LG VG+ REVG EAHERRVDVRGGLGLLEHGAR PA DGAH +
Sbjct: 227 FLVAAGLGRVGVGREVG*EAHERRVDVRGGLGLLEHGARVGEGVGGVPGPADDGAHNR 400
Score = 50.1 bits (103), Expect(2) = 5e-037
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3 / +1
Query: 96 PWSFCRQGSGSG*LVTTTRTELRIH 170
P FCR GSGSG*LVTTTRTELRIH
Sbjct: 28 PDLFCR*GSGSG*LVTTTRTELRIH 102
Score = 49.6 bits (102), Expect(2) = 2e-043
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / -2
Query: 170 VYP*FRTSSCN*LTGATPLPAK 105
VYP*FRTSSCN*LT ATPLPAK
Sbjct: 102 VYP*FRTSSCN*LTRATPLPAK 37
Score = 49.6 bits (102), Expect(3) = 1e-031
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2 / +3
Query: 107 LQAREWLRLTSYNYSYGTTDT 169
LQ REWL LTSYNYSYGTTDT
Sbjct: 39 LQVREWLWLTSYNYSYGTTDT 101
Score = 42.8 bits (87), Expect(3) = 1e-031
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / +1
Query: 178 QSGPNKTNQSPSKIPRP 228
QSGP+KTNQSPSKIPRP
Sbjct: 133 QSGPSKTNQSPSKIPRP 183
>gb|BZ691299.1|BZ691299 SP__Ba0006A20.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0006A20 3', DNA sequence
Length = 858
Score = 89.0 bits (188), Expect(5) = 2e-041
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = -1 / -3
Query: 661 SASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCK 482
SA P +L A+ QVDYILG NP SYMVGYGA +PR+ HHR +S+ SV A+P+ + C+
Sbjct: 415 SAQPSELLAFARSQVDYILGSNPRATSYMVGYGATYPRQAHHRGASIVSVKANPSFVSCQ 236
Query: 481 AG 476
AG
Sbjct: 235 AG 230
Score = 47.3 bits (97), Expect(5) = 2e-041
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = -1 / -3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSAS 653
++ +PGG+++ +N+Q VT +FLL AY+++L+ AG C S+ S
Sbjct: 559 VRRTPGGMVYHQSWNNVQFVTSAAFLLAAYADHLAAAGQAAQCPSAGGS 413
Score = 44.6 bits (91), Expect(5) = 2e-041
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 436 LVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
L+ G D+ D F D R ++Q+E TTY NAPL G+LA +A
Sbjct: 190 LLDGATVGGPDEYDNFADERDNYEQTEATTYNNAPLRGVLARLAA 56
Score = 32.7 bits (65), Expect(5) = 2e-041
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 970 GASDAINEFGWDNKHAGINVLISKEVL 890
G +IN+FGWD K+ G+ VL + +L
Sbjct: 745 GTGWSINQFGWDVKYPGVQVLAAMFLL 665
Score = 30.9 bits (61), Expect(5) = 2e-041
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1 / -3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGAS 962
AWLH+AT Y +Y+ N LG +
Sbjct: 817 AWLHEATGESRYLDYLATNADALGGT 740
>gb|CW784947.1|CW784947 SP__Ba0006A20.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0006A20 3', DNA sequence
Length = 848
Score = 89.0 bits (188), Expect(5) = 2e-041
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = -1 / -2
Query: 661 SASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCK 482
SA P +L A+ QVDYILG NP SYMVGYGA +PR+ HHR +S+ SV A+P+ + C+
Sbjct: 421 SAQPSELLAFARSQVDYILGSNPRATSYMVGYGATYPRQAHHRGASIVSVKANPSFVSCQ 242
Query: 481 AG 476
AG
Sbjct: 241 AG 236
Score = 47.3 bits (97), Expect(5) = 2e-041
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = -1 / -2
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSAS 653
++ +PGG+++ +N+Q VT +FLL AY+++L+ AG C S+ S
Sbjct: 565 VRRTPGGMVYHQSWNNVQFVTSAAFLLAAYADHLAAAGQAAQCPSAGGS 419
Score = 44.6 bits (91), Expect(5) = 2e-041
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 436 LVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
L+ G D+ D F D R ++Q+E TTY NAPL G+LA +A
Sbjct: 196 LLDGATVGGPDEYDNFADERDNYEQTEATTYNNAPLRGVLARLAA 62
Score = 32.7 bits (65), Expect(5) = 2e-041
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 970 GASDAINEFGWDNKHAGINVLISKEVL 890
G +IN+FGWD K+ G+ VL + +L
Sbjct: 751 GTGWSINQFGWDVKYPGVQVLAAMFLL 671
Score = 30.9 bits (61), Expect(5) = 2e-041
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGAS 962
AWLH+AT Y +Y+ N LG +
Sbjct: 823 AWLHEATGESRYLDYLATNADALGGT 746
>gb|BZ628294.1|BZ628294 ih59b05.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih59b05 5', DNA sequence
Length = 546
Score = 116 bits (247), Expect(2) = 1e-037
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = -1 / -1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLM 887
AWLHKA+RRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISK L+
Sbjct: 468 AWLHKASRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKVHLL 316
Score = 110 bits (234), Expect(2) = 2e-032
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +3 / +2
Query: 891 RTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRVALCSHAKKNTAA 1058
R +FEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRR ALCSHA ++++
Sbjct: 320 R*TFEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRDALCSHAAPHSSS 487
Score = 62.9 bits (131), Expect(2) = 1e-037
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2 / -1
Query: 1119 SSSLHAAVCPCYCDYSGYQDELL 1051
SSSLHAAVCPCYCDYSGYQDELL
Sbjct: 546 SSSLHAAVCPCYCDYSGYQDELL 478
Score = 51.0 bits (105), Expect(2) = 2e-032
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLL 1117
H WYPE*SQ*QGHTAAWRLL
Sbjct: 476 HSSSSWYPE*SQ*QGHTAAWRLL 544
>gb|CW214645.1|CW214645 104_646_11194123_148_37054_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194123, DNA
sequence
Length = 582
Score = 121 bits (258), Expect(3) = 6e-037
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = -1 / -3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
++ +PGG L +NMQ+V+ SFLL Y++YLS + G + C P ++ R A+ Q
Sbjct: 517 MKLTPGGFLHVDEWNNMQYVSSASFLLTVYADYLSASRGALRCPDGEVKPGEMVRFARSQ 338
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
DY+LG NP MSYMVGYG+ FP +HHR +S+PSV A + +GC G
Sbjct: 337 ADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIPSVHAMGSVVGCMDG 194
Score = 42.3 bits (86), Expect(3) = 6e-037
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -1 / -3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPA 287
V G D +D F D R +QQ+EPT NAP+ G+ A ++ P A
Sbjct: 139 VVGGPDANDGFVDDRCNYQQAEPTLAGNAPICGVFARLASEPADA 5
Score = 31.3 bits (62), Expect(3) = 6e-037
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 469 YYTSPAPNPNLLVGAVVGGP 410
++ S +PN+L GAVVGGP
Sbjct: 184 FFNSKGADPNVLQGAVVGGP 125
>gb|CW232821.1|CW232821 104_685_11213026_116_37426_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213026, DNA
sequence
Length = 735
Score = 89.0 bits (188), Expect(3) = 1e-036
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = -1 / -3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S+ P I Y+PGG+++K G SNMQHVT +SFLLL Y+ YLS + V+CG S P+ L+
Sbjct: 214 SSSPHITYTPGGMIYKPGGSNMQHVTSISFLLLTYAKYLSKSSHTVNCGDVSVGPLTLQL 35
Query: 634 VAKRQV 617
AK+QV
Sbjct: 34 QAKKQV 17
Score = 73.5 bits (154), Expect(3) = 1e-036
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISK 899
AWL +A+ + +YI+ N LGA D+ NEFGWDNKHAG+NVL+SK
Sbjct: 521 AWLRRASEDDTFLQYIQNNGKTLGAEDSSNEFGWDNKHAGLNVLVSK 381
Score = 31.3 bits (62), Expect(3) = 1e-036
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 919 INVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
+ V+ +E + G QS++ AD+F+CTL+P S+
Sbjct: 316 VAVIALQEFIEGDALSLQSYKEFADSFICTLIPESSS 206
>gb|CW435138.1|CW435138 fsbb001f151c07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151c07, DNA
sequence
Length = 650
Score = 97.3 bits (206), Expect(2) = 1e-036
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR +DPAY+ RL+ RA VFEFADK+RG YS+ L A VCP YC YSGYQDELL
Sbjct: 378 SLVFRKSDPAYASRLVARAKRVFEFADKHRGAYSTGLAADVCPYYCSYSGYQDELL 211
Score = 78.0 bits (164), Expect(2) = 1e-036
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = -1 / -3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
AWLH+ATR Y YI+ N VLGA ++ N FGWDNKHAG VLI+K L+ + + +
Sbjct: 201 AWLHRATRSATYLSYIQSNGAVLGADESDNTFGWDNKHAGARVLIAKSFLVQRQGALREY 22
Query: 859 R 857
+
Sbjct: 21 K 19
Score = 75.8 bits (159), Expect(2) = 2e-023
Identities = 36/57 (63%), Positives = 39/57 (68%)
Frame = +2 / +2
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H WYPE* Q* GHT+A R +L* PR LSANSNT A + RRL *AGS RKT E
Sbjct: 209 HSSSSWYPE*EQ*YGHTSAARPVL*APRCLSANSNTRLALATRRLA*AGSDLRKTRE 379
Score = 55.6 bits (115), Expect(2) = 2e-023
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +3 / +2
Query: 891 RTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRVALCSHAKKNTAA 1058
R MRT PACLLS PN L S AP T L M RY VA CSHA ++++
Sbjct: 53 RNDLAMRTRAPACLLSHPNVLSDSSAPRTAPLLWM*LRYVALLVARCSHAAPHSSS 220
>gb|CW228817.1|CW228817 104_668_11206590_116_37254_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206590, DNA
sequence
Length = 650
Score = 97.3 bits (206), Expect(2) = 3e-036
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR +DPAY+ RL+ RA VFEFADK+RG YS+ L A VCP YC YSGYQDELL
Sbjct: 301 SLVFRKSDPAYASRLVARAKRVFEFADKHRGAYSTGLAADVCPYYCSYSGYQDELL 468
Score = 77.1 bits (162), Expect(2) = 3e-036
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLM 887
AWLH+ATR Y YI+ N VLGA ++ N FGWDNKHAG VLI+K L+
Sbjct: 478 AWLHRATRSATYLSYIQSNGAVLGADESDNTFGWDNKHAGARVLIAKSFLV 630
Score = 75.8 bits (159), Expect(2) = 2e-023
Identities = 36/57 (63%), Positives = 39/57 (68%)
Frame = +2 / -1
Query: 1049 HXXXXWYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
H WYPE* Q* GHT+A R +L* PR LSANSNT A + RRL *AGS RKT E
Sbjct: 470 HSSSSWYPE*EQ*YGHTSAARPVL*APRCLSANSNTRLALATRRLA*AGSDLRKTRE 300
Score = 55.6 bits (115), Expect(2) = 2e-023
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +3 / -1
Query: 891 RTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLLMYSRYSRRRVALCSHAKKNTAA 1058
R MRT PACLLS PN L S AP T L M RY VA CSHA ++++
Sbjct: 626 RNDLAMRTRAPACLLSHPNVLSDSSAPRTAPLLWM*LRYVALLVARCSHAAPHSSS 459
>gb|CW266962.1|CW266962 104_736_11232720_148_35288_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232720, DNA
sequence
Length = 552
Score = 145 bits (311), Expect = 1e-033
Identities = 57/68 (83%), Positives = 63/68 (92%)
Frame = -1 / -3
Query: 487 CKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYF 308
CKAGAAYY SP PNPNLLVGAVVGGP++ +DAFPDARAVFQQSEPTTYINAPL+ LLAYF
Sbjct: 550 CKAGAAYYGSPRPNPNLLVGAVVGGPSNSTDAFPDARAVFQQSEPTTYINAPLLALLAYF 371
Query: 307 SAHPNPAE 284
S HP+PA+
Sbjct: 370 SQHPDPAQ 347
>gb|CW352451.1|CW352451 fsbb001f014l19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f014l19, DNA
sequence
Length = 228
Score = 135 bits (289), Expect = 2e-030
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3 / +2
Query: 621 CRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPP 785
CRLATRRSCTGDADD+PHETRPPAWLR*LE*AS RNDSCVTCCMLLLPTLNSSPP
Sbjct: 5 CRLATRRSCTGDADDDPHETRPPAWLR*LE*ASSRNDSCVTCCMLLLPTLNSSPP 169
Score = 128 bits (274), Expect = 2e-028
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = -1 / -1
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ
Sbjct: 168 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 4
>gb|CW352452.1|CW352452 fsbb001f014l19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f014l19, DNA
sequence
Length = 199
Score = 135 bits (289), Expect = 2e-030
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +3 / -1
Query: 621 CRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPP 785
CRLATRRSCTGDADD+PHETRPPAWLR*LE*AS RNDSCVTCCMLLLPTLNSSPP
Sbjct: 196 CRLATRRSCTGDADDDPHETRPPAWLR*LE*ASSRNDSCVTCCMLLLPTLNSSPP 32
Score = 128 bits (274), Expect = 2e-028
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = -1 / +3
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ
Sbjct: 33 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 197
>gb|CW461110.1|CW461110 fsbb001f208k01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208k01, DNA
sequence
Length = 483
Score = 73.5 bits (154), Expect(3) = 2e-030
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISK 899
AWL +A+ + +YI+ N LGA D+ NEFGWDNKHAG+NVL+SK
Sbjct: 431 AWLRRASEDDTFLQYIQNNGKTLGAEDSSNEFGWDNKHAGLNVLVSK 291
Score = 67.5 bits (141), Expect(3) = 2e-030
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLS 695
S+ P I Y+PGG+++K G SNMQHVT +SFLLL Y+ YLS
Sbjct: 124 SSSPHITYTPGGMIYKPGGSNMQHVTSISFLLLTYAKYLS 5
Score = 31.3 bits (62), Expect(3) = 2e-030
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 919 INVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
+ V+ +E + G QS++ AD+F+CTL+P S+
Sbjct: 226 VAVIALQEFIEGDALSLQSYKEFADSFICTLIPESSS 116
>gb|CW451552.1|CW451552 fsbb001f191k19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191k19, DNA
sequence
Length = 503
Score = 122 bits (262), Expect(2) = 3e-030
Identities = 50/108 (46%), Positives = 70/108 (64%)
Frame = -1 / -3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
++ +PGGLL +NMQ+V+ SFLL Y++YLS + G + C P ++ R A+ Q
Sbjct: 429 MKLTPGGLLHVDEWNNMQYVSSASFLLTVYADYLSASRGALRCPDGEVKPGEMVRFARSQ 250
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
DY+LG NP MSYMVGYG+ FP +HHR +S+PSV A + +GC G
Sbjct: 249 ADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIPSVHAMGSVVGCMDG 106
Score = 31.3 bits (62), Expect(2) = 3e-030
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 469 YYTSPAPNPNLLVGAVVGGP 410
++ S +PN+L GAVVGGP
Sbjct: 96 FFNSKGADPNVLQGAVVGGP 37
>gb|CL187168.1|CL187168 104_402_10900699_114_32432_072 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900699, DNA
sequence
Length = 677
Score = 50.1 bits (103), Expect(4) = 8e-029
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAA 1099
++ FR ADP Y+ RLL AV FE AD++RG YS +A
Sbjct: 209 AVAFRRADPGYAARLLGAAVVAFELADRHRGSYSQGTLSA 328
Score = 48.7 bits (100), Expect(4) = 8e-029
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVL 890
AWLH+A+ + Y++ N V GA + F WD+K G VL+++ VL
Sbjct: 389 AWLHRASGNATFMAYVRANGVQDGAGNDDYSFSWDDKRIGTKVLLARGVL 538
Score = 43.7 bits (89), Expect(4) = 8e-029
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2 / +2
Query: 1113 SLHAAVCPCYCDYSGYQDELL 1051
+L AAVCP YC YSGY DELL
Sbjct: 317 TLSAAVCPFYCSYSGYDDELL 379
Score = 41.8 bits (85), Expect(4) = 8e-029
Identities = 12/34 (35%), Positives = 26/34 (76%)
Frame = -1 / +2
Query: 868 QSFRVNADNFMCTLLPGISNHPQIQYSPGGLLFK 767
Q ++ ++D+++C+L+PG + QY+PGGL+++
Sbjct: 572 QLYKAHSDSYVCSLVPGAAGFQAGQYTPGGLIYR 673
>gb|CL187169.1|CL187169 104_402_10900699_116_32436_072 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900699, DNA
sequence
Length = 592
Score = 129 bits (276), Expect = 9e-029
Identities = 52/72 (72%), Positives = 58/72 (80%)
Frame = -1 / -3
Query: 625 RQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPN 446
RQVDYILG NP S+MVG+G R+PRR+HHR +SLPSV AHPARIGC G AY S AP+
Sbjct: 590 RQVDYILGKNPAGTSFMVGFGERYPRRLHHRGASLPSVRAHPARIGCDQGFAYLHSAAPD 411
Query: 445 PNLLVGAVVGGP 410
NLLVGAVVGGP
Sbjct: 410 ANLLVGAVVGGP 375
>gb|CW197933.1|CW197933 104_622_11181944_148_36827_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181944, DNA
sequence
Length = 730
Score = 98.2 bits (208), Expect(2) = 7e-028
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = -1 / -2
Query: 670 GSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARI 491
G + + ++ +A+ QVDY+LG NP +SY+VGYG+++P R+HHRA+S+ I
Sbjct: 513 GGETVAAEEVFALARAQVDYVLGTNPRGVSYLVGYGSKYPNRVHHRAASIVPYKHSKEFI 334
Query: 490 GCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
GC G ++ + ++ + G D D F D R + Q+E TY AP++G+ A
Sbjct: 333 GCTQGFDHWFGRRSSNPNVLVGAIVGGPDRQDRFRDNRENYMQTEACTYNTAPMVGMFA 157
Score = 47.8 bits (98), Expect(2) = 7e-028
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1 / -2
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAG 686
++ SPGG+L+ +NMQ+VT +FLL YS+YL+ AG
Sbjct: 648 VERSPGGMLYIRQWNNMQYVTSAAFLLSVYSDYLAEAG 535
>gb|CW197932.1|CW197932 104_622_11181944_116_36828_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181944, DNA
sequence
Length = 689
Score = 98.2 bits (208), Expect(2) = 8e-028
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = -1 / +3
Query: 670 GSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARI 491
G + + ++ +A+ QVDY+LG NP +SY+VGYG+++P R+HHRA+S+ I
Sbjct: 258 GGETVAAEEVFALARAQVDYVLGTNPRGVSYLVGYGSKYPNRVHHRAASIVPYKHSKEFI 437
Query: 490 GCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
GC G ++ + ++ + G D D F D R + Q+E TY AP++G+ A
Sbjct: 438 GCTQGFDHWFGRRSSNPNVLVGAIVGGPDRQDRFRDNRENYMQTEACTYNTAPMVGMFA 614
Score = 47.8 bits (98), Expect(2) = 8e-028
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1 / +3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAG 686
++ SPGG+L+ +NMQ+VT +FLL YS+YL+ AG
Sbjct: 123 VERSPGGMLYIRQWNNMQYVTSAAFLLSVYSDYLAEAG 236
>gb|BG357605.1|BG357605 OV2_32_A05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 99.1 bits (210), Expect(3) = 1e-027
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C ++S SP Q+ A QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P
Sbjct: 14 VQCSAASFSPDQISSFATSQVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLP 193
Query: 499 ARIGCKAG 476
++ C G
Sbjct: 194 RKVTCNEG 217
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 278 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 379
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 221 SSWFPTSNANPNNHVGAIVGGP 286
>gb|BG356818.1|BG356818 OV2_10_D04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 578
Score = 99.1 bits (210), Expect(3) = 1e-027
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C ++S SP Q+ A QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P
Sbjct: 38 VQCSAASFSPDQISSFATSQVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLP 217
Query: 499 ARIGCKAG 476
++ C G
Sbjct: 218 RKVTCNEG 241
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 302 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 403
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 245 SSWFPTSNANPNNHVGAIVGGP 310
>gb|BG273330.1|BG273330 OV2_27_A07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 99.1 bits (210), Expect(3) = 1e-027
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C ++S SP Q+ A QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P
Sbjct: 5 VQCSAASFSPDQISSFATSQVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLP 184
Query: 499 ARIGCKAG 476
++ C G
Sbjct: 185 RKVTCNEG 208
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 269 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 370
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 212 SSWFPTSNANPNNHVGAIVGGP 277
>gb|BG241200.1|BG241200 OV1_39_D08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 99.1 bits (210), Expect(3) = 1e-027
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C ++S SP Q+ A QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P
Sbjct: 14 VQCSAASFSPDQISSFATSQVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLP 193
Query: 499 ARIGCKAG 476
++ C G
Sbjct: 194 RKVTCNEG 217
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 278 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 379
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 221 SSWFPTSNANPNNHVGAIVGGP 286
>gb|CW072557.1|CW072557 104_325_10592334_116_30542 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592334, DNA
sequence
Length = 670
Score = 105 bits (224), Expect(2) = 1e-027
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1 / -3
Query: 910 LISKEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPGGL 776
LI++EVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPG L
Sbjct: 305 LINQEVLMGKDEYFQSFRVNADNFMCTLLPGISNHPQIQYSPGPL 171
Score = 104 bits (222), Expect(2) = 7e-027
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -3 / -2
Query: 908 HLKGGSDGEGRVLPVLPCQRRQLHVHPPPRHLQSPPDPVLPRRA 777
H GGS+GEGRVLPV+PCQRRQLHVHPPPRHLQSPPDPVLPR A
Sbjct: 303 HQSGGSNGEGRVLPVVPCQRRQLHVHPPPRHLQSPPDPVLPRSA 172
Score = 100 bits (214), Expect(2) = 3e-027
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +3 / +1
Query: 774 SSPPGEYWIWG*LEMPGRRVHMKLSALTRKDWKYSSFPIRTS 899
+S PGEYWIWG*LEMPGRRVHMKLSALTR DWKYSSFPIRTS
Sbjct: 169 ASGPGEYWIWG*LEMPGRRVHMKLSALTRNDWKYSSFPIRTS 294
Score = 91.3 bits (193), Expect(2) = 2e-022
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = +2 / +3
Query: 785 WGVLDLGVIGDAGEEGAHEVVGVDTEGLEVLVLPHQNLL*DE 910
WGVLDLGVIGDAGEEGAHEVVGVDTE LEVLVLPH NLL DE
Sbjct: 180 WGVLDLGVIGDAGEEGAHEVVGVDTERLEVLVLPH*NLLIDE 305
Score = 43.2 bits (88), Expect(2) = 3e-027
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3 / +1
Query: 738 VTCCMLLLPTLNSSPP 785
VTCCMLLLPTLNSSPP
Sbjct: 1 VTCCMLLLPTLNSSPP 48
Score = 39.6 bits (80), Expect(2) = 1e-027
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3 / -2
Query: 785 RRAAVQGREQQHAARD 738
RRAAVQGREQQHAARD
Sbjct: 48 RRAAVQGREQQHAARD 1
Score = 39.1 bits (79), Expect(2) = 2e-022
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2 / +3
Query: 740 HVLHVAAPDLEQQPA 784
HVLHVAAPDLEQQPA
Sbjct: 3 HVLHVAAPDLEQQPA 47
Score = 38.2 bits (77), Expect(2) = 7e-027
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1 / -3
Query: 784 GGLLFKVGSSNMQHV 740
GGLLFKVGSSNMQHV
Sbjct: 47 GGLLFKVGSSNMQHV 3
>gb|BI351334.1|BI351334 IP1_70_C06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 603
Score = 80.8 bits (170), Expect(4) = 3e-027
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = -1 / +2
Query: 700 LSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSL 521
LS V C SP +R A Q +YILGDNP+++SY+VGYG+ +P+++HHR +S+
Sbjct: 143 LSTRTAAVQCSGKYYSPTDIRNFAASQANYILGDNPMKLSYLVGYGSSYPQQVHHRGASI 322
Query: 520 PSVA 509
P+ A
Sbjct: 323 PADA 334
Score = 35.9 bits (72), Expect(4) = 3e-027
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / +2
Query: 478 GAAYYTSPAPNPNLLVGAVVGGP 410
G Y S PNPN+ VGA+VGGP
Sbjct: 350 GFQYLHSSDPNPNVAVGALVGGP 418
Score = 34.5 bits (69), Expect(4) = 3e-027
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -1 / +2
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYL 698
GGL++ G +++QH T +FL + YS+Y+
Sbjct: 56 GGLVWISGWNSLQHATNAAFLAVVYSDYM 142
Score = 27.6 bits (54), Expect(4) = 3e-027
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1 / +2
Query: 400 SDAFPDARAVFQQSEPTTYINAPLMGLLA 314
+D F D+R Q+E +TY + L+GLL+
Sbjct: 425 NDTFVDSRDNAVQTESSTYNSGTLVGLLS 511
>gb|CW126620.1|CW126620 104_507_11112994_148_34731_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112994, DNA
sequence
Length = 639
Score = 95.5 bits (202), Expect(2) = 7e-027
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = -1 / -1
Query: 676 SCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPA 497
S G SSA P +L A+ QVDYILG NP SYMVGYGA +PR+ HHR +S+ SV A+P+
Sbjct: 615 SAGGSSAQPSELLAFARSQVDYILGSNPRATSYMVGYGATYPRQAHHRGASIVSVKANPS 436
Query: 496 RIGCKAG 476
+ C+AG
Sbjct: 435 FVSCQAG 415
Score = 47.3 bits (97), Expect(2) = 7e-027
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -1 / -1
Query: 436 LVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
L+ G D+ D F D R ++Q+E TTY NAPLMG+LA +A
Sbjct: 375 LLDGATVGGPDEYDNFADERDNYEQTEATTYNNAPLMGVLARLAA 241
>gb|BG240880.1|BG240880 OV1_39_D08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 91.3 bits (193), Expect(3) = 2e-025
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -1 / +1
Query: 655 SPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
SP Q+ A QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P ++ C G
Sbjct: 1 SPDQISSFATSQVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLPRKVTCNEG 180
Score = 35.4 bits (71), Expect(3) = 2e-025
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 241 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 342
Score = 28.6 bits (56), Expect(3) = 2e-025
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +1
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 184 SSWFPTSNANPNNHVGAIVGGP 249
>gb|CW269733.1|CW269733 104_740_11401967_148_36230_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401967, DNA
sequence
Length = 666
Score = 81.3 bits (171), Expect(3) = 3e-025
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = -1 / +1
Query: 652 PVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
P ++ R A+ Q DY+LG NP MSYMVGYG+ FP +HHR +S+PSV A + +GC G
Sbjct: 19 PGEMVRFARSQADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIPSVHAMGSVVGCMDG 195
Score = 42.3 bits (86), Expect(3) = 3e-025
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPA 287
V G D +D F D R +QQ+EPT NAP+ G+ A ++ P A
Sbjct: 250 VVGGPDANDGFVDDRCNYQQAEPTLAGNAPICGVFARLASEPADA 384
Score = 31.3 bits (62), Expect(3) = 3e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 469 YYTSPAPNPNLLVGAVVGGP 410
++ S +PN+L GAVVGGP
Sbjct: 205 FFNSKGADPNVLQGAVVGGP 264
>gb|CW269732.1|CW269732 104_740_11401967_148_35316_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401967, DNA
sequence
Length = 583
Score = 81.3 bits (171), Expect(3) = 3e-025
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = -1 / +1
Query: 652 PVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
P ++ R A+ Q DY+LG NP MSYMVGYG+ FP +HHR +S+PSV A + +GC G
Sbjct: 19 PGEMVRFARSQADYVLGKNPRGMSYMVGYGSYFPTHVHHRGASIPSVHAMGSVVGCMDG 195
Score = 42.3 bits (86), Expect(3) = 3e-025
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPA 287
V G D +D F D R +QQ+EPT NAP+ G+ A ++ P A
Sbjct: 250 VVGGPDANDGFVDDRCNYQQAEPTLAGNAPICGVFARLASEPADA 384
Score = 31.3 bits (62), Expect(3) = 3e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 469 YYTSPAPNPNLLVGAVVGGP 410
++ S +PN+L GAVVGGP
Sbjct: 205 FFNSKGADPNVLQGAVVGGP 264
>gb|CW113155.1|CW113155 104_487_11105287_148_34549_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105287, DNA
sequence
Length = 575
Score = 98.2 bits (208), Expect(2) = 4e-025
Identities = 41/119 (34%), Positives = 67/119 (56%)
Frame = -1 / -3
Query: 670 GSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARI 491
G + + ++ +A+ QVDY+LG NP +SY+VGYG+++P R+HHRA+S+ I
Sbjct: 456 GGETVAAEEVFALARAQVDYVLGTNPRGVSYLVGYGSKYPNRVHHRAASIVPYKHSKEFI 277
Query: 490 GCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
GC G ++ + ++ + G D D F D R + Q+E TY AP++G+ A
Sbjct: 276 GCTQGFDHWFGRRSSNPNVLVGAIVGGPDRQDRFRDNRENYMQTEACTYNTAPMVGMFA 100
Score = 38.6 bits (78), Expect(2) = 4e-025
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 781 GLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAG 686
G+L+ +NMQ+VT +FLL YS+YL+ AG
Sbjct: 573 GMLYIRQWNNMQYVTSAAFLLSVYSDYLAEAG 478
>gb|BG054060.1|BG054060 OV2_1_H08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 90.9 bits (192), Expect(3) = 4e-025
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = -1 / +2
Query: 661 SASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCK 482
S SP Q+ A QVDYI+GDNP MSYMVG+ ++FPRRIHHR SS+PS+ P ++ C
Sbjct: 2 SFSPDQISSFATSQVDYIVGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLPRKVTCN 181
Query: 481 AG 476
G
Sbjct: 182 EG 187
Score = 35.0 bits (70), Expect(3) = 4e-025
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D D F D R SEP TYINA +G A
Sbjct: 248 GGPDGKDQFSDNREDSTHSEPATYINAAFVGACA 349
Score = 28.6 bits (56), Expect(3) = 4e-025
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 191 SSWFPTSNANPNNHVGAIVGGP 256
>gb|CW092289.1|CW092289 104_454_10999062_114_33037_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999062, DNA
sequence
Length = 404
Score = 100 bits (214), Expect(2) = 5e-024
Identities = 40/95 (42%), Positives = 59/95 (62%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q+ +PGG++ +N Q+VT SFL + YS+ L G V CG+ +P +LR A++
Sbjct: 118 QVFITPGGVIHLRDGANTQYVTSTSFLFVVYSDLLLRTGQSVMCGNQPVAPARLREFARQ 297
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLP 518
Q+DY+LG NP SY+VG+GA P + HH +S P
Sbjct: 298 QMDYLLGANPRHSSYVVGFGANSPTQPHHCGASTP 402
Score = 32.2 bits (64), Expect(2) = 5e-024
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 868 QSFRVNADNFMCTLLPGISNH 806
Q+F+V ADNF+C +LP H
Sbjct: 55 QNFKVQADNFVCAVLPDTPFH 117
>gb|CD225907.1|CD225907 CCC1_42_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_G11_A007 3', mRNA sequence
Length = 300
Score = 75.3 bits (158), Expect(2) = 7e-024
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1 / +1
Query: 553 PRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
PR +HHR +S+PSV HPARI C G Y S P+ N+LVGAVVGGP
Sbjct: 1 PRHVHHRGASMPSVGDHPARIACDEGFRYLHSSDPDANVLVGAVVGGP 144
Score = 57.4 bits (119), Expect(2) = 7e-024
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
V G D SDAF D+R F Q+EP+TY NAPL+G LA+F+A
Sbjct: 130 VVGGPDGSDAFTDSRDNFAQTEPSTYTNAPLVGALAFFAA 249
>gb|CW091140.1|CW091140 104_451_10997705_116_32541_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10997705, DNA
sequence
Length = 717
Score = 81.7 bits (172), Expect(4) = 9e-024
Identities = 26/55 (47%), Positives = 43/55 (78%)
Frame = -1 / +2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPS 515
++C S + + LR+ AK Q DY+LGDNP+++SY+VG+G +P+R+HHR +S+P+
Sbjct: 443 LTCSGKSFTALDLRKFAKSQADYVLGDNPMKLSYLVGFGDTYPQRVHHRGASIPA 607
Score = 33.1 bits (66), Expect(4) = 9e-024
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1 / +2
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAG 686
GGLL+ ++QH +FL YSNY++ +G
Sbjct: 335 GGLLYVAEWDSLQHPVASAFLANVYSNYMATSG 433
Score = 26.7 bits (52), Expect(4) = 9e-024
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 886 GKDEYFQSFRVNADNFMCTLLP 821
G+DE S++ A+ MC LLP
Sbjct: 160 GQDEVLGSYKDTAEAVMCILLP 225
Score = 25.4 bits (49), Expect(4) = 9e-024
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 451 PNPNLLVGAVVGGP 410
P P++ GA+VGGP
Sbjct: 655 PQPDVATGALVGGP 696
>gb|CW203020.1|CW203020 104_629_11185408_116_36915_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185408, DNA
sequence
Length = 701
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 48/133 (36%), Positives = 72/133 (54%)
Frame = -1 / -2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C +L +A+ Q DY+LG NP +SY+VG G RFPRR+HHR +S+ S A
Sbjct: 445 VQCPDGPVRAGELLELARAQADYVLGGNPAGVSYLVGNGQRFPRRVHHRGASIVSHRADG 266
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGL 320
IGC G ++ A + +V + G D D F D R+ + Q+E TY AP++G+
Sbjct: 265 RFIGCVQGYDHWFRRAGSNPNVVVGAIVGGPDHRDRFSDRRSNYMQTEACTYNTAPMVGV 86
Query: 319 LAYFSAHPNPAES 281
A+ + +E+
Sbjct: 85 FAHLHSQAGRSET 47
Score = 24.0 bits (46), Expect(2) = 2e-023
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 785 RRAAVQGREQQHAARDAAVVPPAGLL 708
RR A++ +QHA R +PP LL
Sbjct: 560 RRHALRPAVEQHAVRHQRRLPPHRLL 483
>gb|CW203021.1|CW203021 104_629_11185408_148_37061_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185408, DNA
sequence
Length = 700
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 48/133 (36%), Positives = 72/133 (54%)
Frame = -1 / +3
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C +L +A+ Q DY+LG NP +SY+VG G RFPRR+HHR +S+ S A
Sbjct: 258 VQCPDGPVRAGELLELARAQADYVLGGNPAGVSYLVGNGQRFPRRVHHRGASIVSHRADG 437
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGL 320
IGC G ++ A + +V + G D D F D R+ + Q+E TY AP++G+
Sbjct: 438 RFIGCVQGYDHWFRRAGSNPNVVVGAIVGGPDHRDRFSDRRSNYMQTEACTYNTAPMVGV 617
Query: 319 LAYFSAHPNPAES 281
A+ + +E+
Sbjct: 618 FAHLHSQAGRSET 656
Score = 24.0 bits (46), Expect(2) = 2e-023
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / +2
Query: 785 RRAAVQGREQQHAARDAAVVPPAGLL 708
RR A++ +QHA R +PP LL
Sbjct: 143 RRHALRPAVEQHAVRHQRRLPPHRLL 220
>gb|CW166954.1|CW166954 104_576_11153336_148_36679_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153336, DNA
sequence
Length = 698
Score = 107 bits (228), Expect(2) = 2e-023
Identities = 48/133 (36%), Positives = 72/133 (54%)
Frame = -1 / -2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V C +L +A+ Q DY+LG NP +SY+VG G RFPRR+HHR +S+ S A
Sbjct: 580 VQCPDGPVRAGELLELARAQADYVLGGNPAGVSYLVGNGQRFPRRVHHRGASIVSHRADG 401
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGL 320
IGC G ++ A + +V + G D D F D R+ + Q+E TY AP++G+
Sbjct: 400 RFIGCVQGYDHWFRRAGSNPNVVVGAIVGGPDHRDRFSDRRSNYMQTEACTYNTAPMVGV 221
Query: 319 LAYFSAHPNPAES 281
A+ + +E+
Sbjct: 220 FAHLHSQAGRSET 182
Score = 24.0 bits (46), Expect(2) = 2e-023
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 785 RRAAVQGREQQHAARDAAVVPPAGLL 708
RR A++ +QHA R +PP LL
Sbjct: 695 RRHALRPAVEQHAVRHQRRLPPHRLL 618
>gb|CW268398.1|CW268398 104_739_11401275_148_35312_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401275, DNA
sequence
Length = 749
Score = 84.9 bits (179), Expect(3) = 2e-023
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -1 / -1
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P ++ C G
Sbjct: 605 QVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLPRKVTCNEG 459
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / -1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 398 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 297
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 455 SSWFPTSNANPNNHVGAIVGGP 390
>gb|CW311776.1|CW311776 104_801_11470407_116_36281_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470407, DNA
sequence
Length = 681
Score = 84.9 bits (179), Expect(3) = 2e-023
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -1 / -1
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P ++ C G
Sbjct: 522 QVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLPRKVTCNEG 376
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / -1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 315 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 214
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 372 SSWFPTSNANPNNHVGAIVGGP 307
>gb|CW041223.1|CW041223 104_274_10506453_116_30433 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506453, DNA
sequence
Length = 650
Score = 84.9 bits (179), Expect(3) = 2e-023
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -1 / -1
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
QVDYILGDNP MSYMVG+ ++FPRRIHHR SS+PS+ P ++ C G
Sbjct: 620 QVDYILGDNPKGMSYMVGFSSKFPRRIHHRGSSIPSIKVLPRKVTCNEG 474
Score = 35.4 bits (71), Expect(3) = 2e-023
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1 / -1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLA 314
G D +D F D R SEP TYINA +G A
Sbjct: 413 GGPDGNDQFSDNREDSTHSEPATYINAAFVGACA 312
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 475 AAYYTSPAPNPNLLVGAVVGGP 410
++++ + NPN VGA+VGGP
Sbjct: 470 SSWFPTSNANPNNHVGAIVGGP 405
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,095,943,405
Number of Sequences: 832831
Number of extensions: 16834083
Number of successful extensions: 147712
Number of sequences better than 1.0e-020: 64
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 41411278701
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)