TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521353.2.1
(1279 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF588070.1|BF588070 FM1_37_C12.b1_A003 Floral-Induced Me... 463 e-129
gb|CD222877.1|CD222877 CCC1_24_C07.g1_A007 Callus culture/c... 405 e-112
gb|CW276614.1|CW276614 104_750_11405585_148_35398_073 Sorgh... 259 e-108
gb|CW203847.1|CW203847 104_631_11186229_116_37092_085 Sorgh... 226 e-102
gb|CW378949.1|CW378949 fsbb001f057p05k0 Sorghum methylation... 188 2e-091
gb|CW232895.1|CW232895 104_685_11213064_148_37363_084 Sorgh... 180 6e-089
gb|CX615573.1|CX615573 GABR1_21_A01.b1_A002 GA- or brassino... 285 1e-088
gb|CF489987.1|CF489987 POL1_61_G01.g1_A002 Pollen Sorghum b... 262 2e-088
gb|BI246029.1|BI246029 IP1_66_G09.b1_A002 Immature pannicle... 301 1e-080
gb|BF587512.1|BF587512 FM1_37_C12.g1_A003 Floral-Induced Me... 228 3e-068
gb|BI245542.1|BI245542 IP1_66_G09.g1_A002 Immature pannicle... 189 2e-060
gb|BG357722.1|BG357722 OV2_29_E09.b1_A002 Ovary 2 (OV2) Sor... 223 4e-057
gb|CF485313.1|CF485313 POL1_30_F07.g1_A002 Pollen Sorghum b... 218 1e-055
gb|CW203848.1|CW203848 104_631_11186229_148_37093_085 Sorgh... 213 6e-054
gb|BG158765.1|BG158765 RHIZ2_44_A05.b1_A003 Rhizome2 (RHIZ2... 191 2e-047
gb|CW446397.1|CW446397 fsbb001f179a13k0 Sorghum methylation... 149 6e-035
gb|BG357409.1|BG357409 OV2_29_E09.g1_A002 Ovary 2 (OV2) Sor... 148 2e-034
gb|CB925815.1|CB925815 ABA1_23_D08.g1_A012 Abscisic acid-tr... 145 1e-033
gb|CX615201.1|CX615201 GABR1_18_F03.g1_A002 GA- or brassino... 134 3e-030
gb|CW276613.1|CW276613 104_750_11405585_116_35394_073 Sorgh... 115 2e-024
gb|CB927535.1|CB927535 ABA1_26_H06.g1_A012 Abscisic acid-tr... 112 9e-024
gb|CW142191.1|CW142191 104_533_11136722_148_34941_007 Sorgh... 103 7e-021
>gb|BF588070.1|BF588070 FM1_37_C12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 594
Score = 463 bits (1006), Expect = e-129
Identities = 190/192 (98%), Positives = 191/192 (99%)
Frame = -3 / +2
Query: 1229 EMEDGGKAPAGLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI 1050
EMEDGGKAPA LGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI
Sbjct: 17 EMEDGGKAPASLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI 196
Query: 1049 GAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTP 870
GAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTP
Sbjct: 197 GAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTP 376
Query: 869 ATTVILQWLVWSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTI 690
ATTVILQWLVW+KHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTI
Sbjct: 377 ATTVILQWLVWNKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTI 556
Query: 689 LAESLLHGYKFD 654
LAESLLHGYKFD
Sbjct: 557 LAESLLHGYKFD 592
Score = 437 bits (948), Expect = e-121
Identities = 184/194 (94%), Positives = 188/194 (96%)
Frame = +1 / -1
Query: 652 LSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRHSKC 831
LSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPT+GTSEAHMRHSKC
Sbjct: 594 LSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTMGTSEAHMRHSKC 415
Query: 832 LLQTSHCRITVVAGVKDLIVCMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IR 1011
L QTSHCRITVVAGVKDLIVCMKETGM*R+LTFPSTMFMQKT DIGNI FQRSSGST*I
Sbjct: 414 LFQTSHCRITVVAGVKDLIVCMKETGM*RRLTFPSTMFMQKTNDIGNIRFQRSSGST*IS 235
Query: 1012 GFALRTWIAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
GFAL TWIAM*AP+EEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV
Sbjct: 234 GFALSTWIAM*APIEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 55
Query: 1192 PRPAGALPPSSIST 1233
PR AGALPPSSIS+
Sbjct: 54 PRLAGALPPSSISS 13
Score = 394 bits (855), Expect = e-108
Identities = 159/193 (82%), Positives = 166/193 (86%)
Frame = +3 / -3
Query: 654 VKLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEML 833
VK VSME GLCQDGLCR SQAANHGST+T+NVEAKLCHRSQEYS NY D+RSPYAPLEML
Sbjct: 592 VKFVSMEQGLCQDGLCRCSQAANHGSTKTKNVEAKLCHRSQEYSPNYGDERSPYAPLEML 413
Query: 834 APD*PLQNNCGCRSERFDCLHEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQG 1013
PD*PLQNNCGCRSERFDCLHEGDW+VAQA ISQHNVYAEDE HWKYP PAVLRFNLNQ
Sbjct: 412 IPD*PLQNNCGCRSERFDCLHEGDWNVAQAHISQHNVYAEDERHWKYPLPAVLRFNLNQR 233
Query: 1014 FRLEDMDCNVSSNGRADEVDAGHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEHXXXXX 1193
FRL+ MDCNVSSN RADEVD GHGER+LEIQFLEDPLVHDDD DVEAPPLEDGEH
Sbjct: 232 FRLKHMDCNVSSN*RADEVDTGHGERKLEIQFLEDPLVHDDDGDVEAPPLEDGEHRAQGA 53
Query: 1194 XXXXXXXXVLHLY 1232
VLHL+
Sbjct: 52 QAGRRLAAVLHLF 14
Score = 381 bits (826), Expect = e-104
Identities = 149/170 (87%), Positives = 156/170 (91%)
Frame = -2 / +1
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVGLQRH HHHEQVDLPETGFQV SHRVL PLHLLF+WSLHCNPC GET DSS*TGGPL
Sbjct: 85 VVGLQRHRHHHEQVDLPETGFQVSSHRVLCPLHLLFNWSLHCNPCA*GETADSS*TGGPL 264
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLHADNQIFHSCNHSYSAVASLEQAFRVAHMGFA 802
E DISNV+RLLHKHCAGKC+ ALH SLLHADNQIFHSCNHSYSA+ASLE AFRVAHMGFA
Sbjct: 265 EADISNVVRLLHKHCAGKCEPALHSSLLHADNQIFHSCNHSYSAMASLE*AFRVAHMGFA 444
Query: 801 GPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGRVPTPWIQV*Q 652
P+SW NTPDFGDRA*LQHF FLCCHGWLPGY+YKDHLGRVP PWIQ+*Q
Sbjct: 445 RPHSWGNTPDFGDRA*LQHFWFLCCHGWLPGYIYKDHLGRVPAPWIQI*Q 594
Score = 300 bits (649), Expect = 4e-080
Identities = 138/169 (81%), Positives = 141/169 (83%)
Frame = +2 / -2
Query: 665 IHGVGTLPRWSL*T*PGSQPWQHRNRKC*S*ALSPKSGVFRQL*GPAKPICATRNACSRL 844
IHG GTLPRWSL* *PGSQPWQH+N+KC*S*ALSPKSGVF QL G AKPICATRNA SRL
Sbjct: 581 IHGAGTLPRWSL*M*PGSQPWQHKNQKC*S*ALSPKSGVFPQLWGRAKPICATRNAYSRL 402
Query: 845 ATAE*LWLQE*KI*LSA*RRLGCSAS*HFPAQCLCRRRRTLEISFSSGPPVQLESGVSP* 1024
A AE*LWLQE*KI*LSA*RRL CSA HFPAQCLCRRR TLEIS SSGPPVQLES VSP*
Sbjct: 401 AIAE*LWLQE*KI*LSA*RRLECSAGSHFPAQCLCRRRTTLEISASSGPPVQLESAVSP* 222
Query: 1025 GHGLQCKLQWKXXXXXXXXXXXXX*NPVSGRSTCS***Q*R*SPTTGGW 1171
HGLQCKLQ K *NPVSGRSTCS***+*R*SPTTGGW
Sbjct: 221 AHGLQCKLQLKSR*SGHRTR*EET*NPVSGRSTCS***R*R*SPTTGGW 75
Score = 225 bits (486), Expect = 1e-057
Identities = 104/132 (78%), Positives = 105/132 (79%)
Frame = -1 / +3
Query: 1048 ELTLQSMSSRRNP*FKLNRRTAGKGYFQCPSSSA*TLCWEMSACATSQSPSCRQSNLSLL 869
ELTLQSM RRN *FKLNRRTAG GYFQC SSSA*TLCWEM ACAT QSPSCRQSNLSLL
Sbjct: 198 ELTLQSMCLRRNR*FKLNRRTAGSGYFQCRSSSA*TLCWEM*ACATFQSPSCRQSNLSLL 377
Query: 868 QPQLFCXXXXXXXXXXXXXGLRWSL*LAEYS*LR*QSLASTFSVSVLPWLAAWLRLQRPS 689
QPQLFC GLR S *L EYS*LR*QSLASTF V VLPWLAAWL LQRPS
Sbjct: 378 QPQLFCNG*SGISISSGAYGLRSSP*LGEYS*LR*QSLASTFLVFVLPWLAAWLHLQRPS 557
Query: 688 WQSPYSMDTSLT 653
WQSP SMDT+LT
Sbjct: 558 WQSPCSMDTNLT 593
>gb|CD222877.1|CD222877 CCC1_24_C07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_24_C07_A007 5', mRNA sequence
Length = 663
Score = 405 bits (879), Expect = e-112
Identities = 164/178 (92%), Positives = 172/178 (96%)
Frame = -3 / +3
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKP 1011
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSSIGAYIAI VLK KP
Sbjct: 129 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKVLKTKP 308
Query: 1010 LIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSK 831
LI+V EDRW+RIFPMSFVFCINIVLGNVSLRYIPVSFMQT+KSFTPATTVILQWLVW K
Sbjct: 309 LIEVATEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTVKSFTPATTVILQWLVWRK 488
Query: 830 HFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAESLLHGYKF 657
+FEWRIWASL+PIVGGILLTSVTELSFN FGFCAAMVGCLATSTKTILAESLLHGYKF
Sbjct: 489 YFEWRIWASLIPIVGGILLTSVTELSFNTFGFCAAMVGCLATSTKTILAESLLHGYKF 662
Score = 336 bits (727), Expect = 6e-091
Identities = 144/178 (80%), Positives = 149/178 (83%)
Frame = +1 / -3
Query: 658 NLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRHSKCLL 837
NLYPWS DSAKMVFVDVARQPTMAAQKP +LKLSSVTEVR +PPTIG EA MRHSK L
Sbjct: 661 NLYPWSSDSAKMVFVDVARQPTMAAQKPNVLKLSSVTEVRRMPPTIGIKEAQMRHSKYFL 482
Query: 838 QTSHCRITVVAGVKDLIVCMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGF 1017
T+H RITVVAGVKD VCMKETGM RKLTFPSTMFMQ T DIGNIL RSS +T I GF
Sbjct: 481 HTNH*RITVVAGVKDFTVCMKETGMYRKLTFPSTMFMQNTNDIGNILLHRSSVATSISGF 302
Query: 1018 ALRTWIAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
RT IAM*AP+EE MKWT DTVRGNL SSFWKIHL MMMTVTL PHHWRMASTAR V
Sbjct: 301 VFRTLIAM*APIEEHMKWTHDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMASTARMV 128
Score = 260 bits (562), Expect = 4e-068
Identities = 101/168 (60%), Positives = 127/168 (75%)
Frame = -2 / +2
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVG+QRH HHH+QVDLPETG QVPS V+RPLH+LF+ SLH N + + D GGP+
Sbjct: 158 VVGIQRHRHHHQQVDLPETGVQVPSDGVVRPLHMLFYRSLHRNQSSENKATDRGCHGGPM 337
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLHADNQIFHSCNHSYSAVASLEQAFRVAHMGFA 802
EKDI NV+R+LHKHCAG+C+LA+H LLHAD +IFHSCNHS S+V +E+ R+AH+GF
Sbjct: 338 EKDIPNVIRVLHKHCAGECELAVHSGLLHADRKIFHSCNHSDSSVVGVEEILRMAHLGFF 517
Query: 801 GPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGRVPTPWIQV 658
PY R++ DFG+ A LQH L HG LPG+++KDH GRV PWIQ+
Sbjct: 518 DPYCGRHSSDFGN*AELQHVWLLRRHGGLPGHIHKDHFGRVTAPWIQI 661
Score = 259 bits (561), Expect = 5e-068
Identities = 109/174 (62%), Positives = 133/174 (76%)
Frame = +3 / -2
Query: 657 KLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEMLA 836
+ VSME LCQ+GLC QAA+HG E + VEA+L +RSQ+ +++ RDQRSP AP E+
Sbjct: 662 EFVSMEQ*LCQNGLCGCGQAAHHGGAEAKRVEAQLSYRSQKNASHNRDQRSPDAPFEVFP 483
Query: 837 PD*PLQNNCGCRSERFDCLHEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGF 1016
P PL+N+CGCRSERF LHEGD +V QA I QHNVYAE E HW+YP P+VLR NL+Q
Sbjct: 482 PHQPLKNHCGCRSERFYGLHEGDRNVPQAHIPQHNVYAEHE*HWEYPSPSVLRGNLDQWL 303
Query: 1017 RLEDMDCNVSSNGRADEVDAGHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEH 1178
++ DC+V S+ RA EVDA H +RELE+QFLEDPLV DDD DVE+PPLEDGEH
Sbjct: 302 CFQNFDCDVGSDRRAYEVDARHRQRELELQFLEDPLVDDDDGDVESPPLEDGEH 141
Score = 137 bits (293), Expect(2) = 8e-040
Identities = 68/115 (59%), Positives = 74/115 (64%)
Frame = +2 / -1
Query: 665 IHGVGTLPRWSL*T*PGSQPWQHRNRKC*S*ALSPKSGVFRQL*GPAKPICATRNACSRL 844
IHG TLP+WSL PGS PW+ R++ C*S A PKS *G KP CA R+ S
Sbjct: 654 IHGAVTLPKWSLWMWPGSPPWRRRSQTC*SSAQLPKSEECLPQ*GSKKPRCAIRSISSTP 475
Query: 845 ATAE*LWLQE*KI*LSA*RRLGCSAS*HFPAQCLCRRRRTLEISFSSGPPVQLES 1009
T E LWLQE*KI SA*RR C+AS H PAQCLCR R TL ISFS GPP Q S
Sbjct: 474 TTEESLWLQE*KILRSA*RRPECTASSHSPAQCLCRTRMTLGISFSIGPPWQPRS 310
Score = 122 bits (262), Expect = 8e-027
Identities = 68/130 (52%), Positives = 76/130 (58%)
Frame = -1 / +1
Query: 1048 ELTLQSMSSRRNP*FKLNRRTAGKGYFQCPSSSA*TLCWEMSACATSQSPSCRQSNLSLL 869
E T QS +++ * +L RRT G+GY QC S SA*TLCW M AC T +SPSCR NLSLL
Sbjct: 271 EPTSQSKF*KQSH*SRLPRRTDGEGYSQCHSCSA*TLCWGM*ACGTFRSPSCRP*NLSLL 450
Query: 868 QPQLFCXXXXXXXXXXXXXGLRWSL*LAEYS*LR*QSLASTFSVSVLPWLAAWLRLQRPS 689
QPQ F GL SL + *LR* S AST S PW AAW QRP
Sbjct: 451 QPQ*FFSGWCGGNTSNGASGLL*SLLWEAFF*LR*LS*ASTRLASAPPWWAAWPHPQRPF 630
Query: 688 WQSPYSMDTS 659
WQS SMDT+
Sbjct: 631 WQSHCSMDTN 660
Score = 49.2 bits (101), Expect(2) = 8e-040
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2 / -1
Query: 1034 LQCKLQWKXXXXXXXXXXXXX*NPVSGRSTCS***Q*R*SPTTGGW 1171
L+C+L+ K * PVSGRSTC ***+*R* PTTGGW
Sbjct: 285 LRCRLR*KSI*SGRTTPSEGT*TPVSGRSTC****R*R*IPTTGGW 148
>gb|CW276614.1|CW276614 104_750_11405585_148_35398_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405585, DNA
sequence
Length = 693
Score = 259 bits (561), Expect(2) = e-108
Identities = 106/124 (85%), Positives = 116/124 (93%)
Frame = -3 / +3
Query: 653 SINTVYYMAPFATMILALPAMVLEGGGVMNWFYTHDSIVPALTIILGSGVLAFCLNFSIF 474
SINTVYYMAPFATMIL++PAMVLEG GV++W YT++S+ PAL II+ SGVLAFCLNFSIF
Sbjct: 309 SINTVYYMAPFATMILSVPAMVLEGSGVVSWLYTYESVGPALAIIVTSGVLAFCLNFSIF 488
Query: 473 YVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHLIS 294
YVIHSTTAVTFNVAGNLKVAVAVLVSW IFRNPISAMNA+GC +TLVGCTFYGYVRHLIS
Sbjct: 489 YVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAVTLVGCTFYGYVRHLIS 668
Query: 293 QRQA 282
Q QA
Sbjct: 669 QHQA 680
Score = 171 bits (369), Expect(2) = 4e-073
Identities = 79/121 (65%), Positives = 88/121 (72%)
Frame = +1 / -3
Query: 292 CEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXXXXXXNVTAVVEWMT 471
CE+RCLT*P*KVQPT V P AF+AE+GFRKI HD NVTAVVEW+T
Sbjct: 670 CEMRCLT*P*KVQPTSVTAQPTAFMAEMGFRKIIHDTSTATATLRLPATLNVTAVVEWIT 491
Query: 472 *KMEKLRQNASTPEPRMIVSAGTMESCV*NQFITPPPSSTIAGRASIMVAKGAM*YTVLM 651
*KMEKLRQ ASTP+ MI SAG +S V*+Q TP PSST+AG I+VAKGAM*YTVLM
Sbjct: 490 *KMEKLRQKASTPDVTMIASAGPTDSYV*SQLTTPLPSSTMAGTDRIIVAKGAM*YTVLM 311
Query: 652 L 654
L
Sbjct: 310 L 308
Score = 154 bits (330), Expect(2) = 6e-054
Identities = 64/125 (51%), Positives = 85/125 (68%)
Frame = +3 / -2
Query: 285 LALRDQMPHIAIESATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKVACNVERHCCC*M 464
L LRD++PH+A+E A ++ DS D +H RD +PED PRH H H +VA +VERH +
Sbjct: 677 LMLRDEVPHVAVEGAADERDSAADGVHGRDGVPEDHPRHQHRHGHLEVAGHVERHGRRRV 498
Query: 465 DDVEDGEVKAERKHPRT*DDSQRRNDGIMCVEPVHYTSSFKHHRW*SQYHGGKGCHVVHR 644
D VEDGEV+AE +HPR DD QR G++ VEP H+ ++ +HH W Q H KG HVVHR
Sbjct: 497 DHVEDGEVEAEGQHPRRDDDRQRWPHGLVRVEPAHHAAALQHHGWH*QDHRRKGSHVVHR 318
Query: 645 VNAVK 659
V+A +
Sbjct: 317 VDAAQ 303
Score = 153 bits (329), Expect(2) = e-108
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = -3 / +3
Query: 839 WSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAESLLHGYK 660
W K+FEWRIWASL+PIVGGILLTSVTELSFN FGFCAAMVGCLATSTKTILAESLLHGYK
Sbjct: 3 WRKYFEWRIWASLIPIVGGILLTSVTELSFNTFGFCAAMVGCLATSTKTILAESLLHGYK 182
Query: 659 FDSINTVYY 633
FD +T YY
Sbjct: 183 FDRYSTSYY 209
Score = 125 bits (268), Expect(2) = 4e-073
Identities = 54/65 (83%), Positives = 56/65 (86%)
Frame = +1 / -3
Query: 643 VLMLSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRH 822
VL LSNLYPWS DSAKMVFVDVARQPTMAAQKP +LKLSSVTEVR +PPTIG EA MRH
Sbjct: 199 VLYLSNLYPWSSDSAKMVFVDVARQPTMAAQKPNVLKLSSVTEVRRMPPTIGIKEAQMRH 20
Query: 823 SKCLL 837
SK L
Sbjct: 19 SKYFL 5
Score = 86.3 bits (182), Expect(2) = 1e-035
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -2 / +2
Query: 840 LEQAFRVAHMGFAGPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGRVPTPWIQ 661
+E+ R+AH+GF PY R++ DFG+ A LQH L HG LPG+++KDH GRV PWIQ
Sbjct: 2 VEEILRMAHLGFFDPYCGRHSSDFGN*AELQHVWLLRRHGGLPGHIHKDHFGRVTAPWIQ 181
Query: 660 V*QH*HGVL 634
+ Q *+ +L
Sbjct: 182 IRQV*YKLL 208
Score = 85.8 bits (181), Expect(2) = 1e-035
Identities = 51/124 (41%), Positives = 60/124 (48%)
Frame = -2 / +2
Query: 654 QH*HGVLHGTLCHHDTGSTSDGA*RRRCNELVLHT*FHRSCADYHPRFGGACVXXXXXXX 475
QH HGVLHG+LC D S S GA +R EL LH + A H GGA +
Sbjct: 308 QHQHGVLHGSLCDDDPVSASHGAGGQRRGELALHVRVRGASAGDHRHVGGAGLLPQLLHL 487
Query: 474 XXXPFNNSSDVQRCRQP*SRXXXXXXXVDLPESNLCNECNRVWNHPGWLHFLWLCEASDL 295
P ++ DVQR RQP DLPE +L +E R+ H LH L L EA L
Sbjct: 488 LRDPLDDGRDVQRGRQPQGGRGGAGVVDDLPEPHLGHERRRLRCHARRLHLLRLREAPHL 667
Query: 294 AAPG 283
AA G
Sbjct: 668 AASG 679
Score = 79.4 bits (167), Expect(2) = 6e-054
Identities = 34/62 (54%), Positives = 45/62 (72%)
Frame = +3 / -2
Query: 654 VKLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEML 833
V+ VSME LCQ+GLC QAA+HG E + VEA+L +RSQ+ +++ RDQRSP AP E+
Sbjct: 188 VEFVSMEQ*LCQNGLCGCGQAAHHGGAEAKRVEAQLSYRSQKNASHNRDQRSPDAPFEVF 9
Query: 834 AP 839
P
Sbjct: 8 PP 3
>gb|CW203847.1|CW203847 104_631_11186229_116_37092_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186229, DNA
sequence
Length = 671
Score = 226 bits (487), Expect(2) = e-102
Identities = 92/109 (84%), Positives = 102/109 (93%)
Frame = -3 / +3
Query: 653 SINTVYYMAPFATMILALPAMVLEGGGVMNWFYTHDSIVPALTIILGSGVLAFCLNFSIF 474
SINTVYYMAPFATMIL++PAMVLEG GV++W YT++S+ PAL II+ SGVLAFCLNFSIF
Sbjct: 345 SINTVYYMAPFATMILSVPAMVLEGSGVVSWLYTYESVGPALAIIVTSGVLAFCLNFSIF 524
Query: 473 YVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGC 327
YVIHSTTAVTFNVAGNLKVAVAVLVSW IFRNPISAMNA+GC +TLVGC
Sbjct: 525 YVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAVTLVGC 671
Score = 170 bits (365), Expect(2) = e-102
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -3 / +3
Query: 860 VILQWLVWSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAE 681
VILQWLVW K+FEWRIWASL+PIVGGILLTSVTELSFN FGFCAAMVGCLATSTKTILAE
Sbjct: 18 VILQWLVWRKYFEWRIWASLIPIVGGILLTSVTELSFNTFGFCAAMVGCLATSTKTILAE 197
Query: 680 SLLHGYKFDSINTVYY 633
SLLHGYKFD +T YY
Sbjct: 198 SLLHGYKFDRYSTSYY 245
Score = 146 bits (313), Expect(2) = 1e-068
Identities = 68/109 (62%), Positives = 76/109 (69%)
Frame = +1 / -2
Query: 328 QPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXXXXXXNVTAVVEWMT*KMEKLRQNAST 507
QPT V P AF+AE+GFRKI HD NVTAVVEW+T*KMEKLRQ AST
Sbjct: 670 QPTSVTAQPTAFMAEMGFRKIIHDTSTATATLRLPATLNVTAVVEWIT*KMEKLRQKAST 491
Query: 508 PEPRMIVSAGTMESCV*NQFITPPPSSTIAGRASIMVAKGAM*YTVLML 654
P+ MI SAG +S V*+Q TP PSST+AG I+VAKGAM*YTVLML
Sbjct: 490 PDVTMIASAGPTDSYV*SQLTTPLPSSTMAGTDRIIVAKGAM*YTVLML 344
Score = 136 bits (292), Expect(2) = 1e-068
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = +1 / -2
Query: 643 VLMLSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRH 822
VL LSNLYPWS DSAKMVFVDVARQPTMAAQKP +LKLSSVTEVR +PPTIG EA MRH
Sbjct: 235 VLYLSNLYPWSSDSAKMVFVDVARQPTMAAQKPNVLKLSSVTEVRRMPPTIGIKEAQMRH 56
Query: 823 SKCLLQTSHCRIT 861
SK L T+H RIT
Sbjct: 55 SKYFLHTNH*RIT 17
Score = 130 bits (279), Expect(2) = 4e-050
Identities = 56/111 (50%), Positives = 73/111 (65%)
Frame = +3 / -1
Query: 327 ATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKVACNVERHCCC*MDDVEDGEVKAERKH 506
A ++ DS D +H RD +PED PRH H H +VA +VERH +D VEDGEV+AE +H
Sbjct: 671 AADERDSAADGVHGRDGVPEDHPRHQHRHGHLEVAGHVERHGRRRVDHVEDGEVEAEGQH 492
Query: 507 PRT*DDSQRRNDGIMCVEPVHYTSSFKHHRW*SQYHGGKGCHVVHRVNAVK 659
PR DD QR G++ VEP H+ ++ +HH W Q H KG HVVHRV+A +
Sbjct: 491 PRRDDDRQRWPHGLVRVEPAHHAAALQHHGWH*QDHRRKGSHVVHRVDAAQ 339
Score = 90.9 bits (192), Expect(2) = 1e-032
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / +2
Query: 861 SYSAVASLEQAFRVAHMGFAGPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGR 682
S S+V +E+ R+AH+GF PY R++ DFG+ A LQH L HG LPG+++KDH GR
Sbjct: 17 SDSSVVGVEEILRMAHLGFFDPYCGRHSSDFGN*AELQHVWLLRRHGGLPGHIHKDHFGR 196
Query: 681 VPTPWIQV*QH*HGVL 634
V PWIQ+ Q *+ +L
Sbjct: 197 VTAPWIQIRQV*YKLL 244
Score = 90.0 bits (190), Expect(2) = 4e-050
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3 / -1
Query: 654 VKLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEML 833
V+ VSME LCQ+GLC QAA+HG E + VEA+L +RSQ+ +++ RDQRSP AP E+
Sbjct: 224 VEFVSMEQ*LCQNGLCGCGQAAHHGGAEAKRVEAQLSYRSQKNASHNRDQRSPDAPFEVF 45
Query: 834 APD*PLQNNC 863
P PL+N+C
Sbjct: 44 PPHQPLKNHC 15
Score = 71.2 bits (149), Expect(2) = 1e-032
Identities = 41/105 (39%), Positives = 50/105 (47%)
Frame = -2 / +2
Query: 654 QH*HGVLHGTLCHHDTGSTSDGA*RRRCNELVLHT*FHRSCADYHPRFGGACVXXXXXXX 475
QH HGVLHG+LC D S S GA +R EL LH + A H GGA +
Sbjct: 344 QHQHGVLHGSLCDDDPVSASHGAGGQRRGELALHVRVRGASAGDHRHVGGAGLLPQLLHL 523
Query: 474 XXXPFNNSSDVQRCRQP*SRXXXXXXXVDLPESNLCNECNRVWNH 340
P ++ DVQR RQP DLPE +L +E R+ H
Sbjct: 524 LRDPLDDGRDVQRGRQPQGGRGGAGVVDDLPEPHLGHERRRLRCH 658
>gb|CW378949.1|CW378949 fsbb001f057p05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057p05, DNA
sequence
Length = 769
Score = 188 bits (406), Expect(2) = 2e-091
Identities = 78/86 (90%), Positives = 81/86 (94%)
Frame = -3 / -1
Query: 1118 IFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINI 939
I QKL+FKFPLTVSCVHFICSSIGAYIAI VLK KPLI+V EDRW+RIFPMSFVFCINI
Sbjct: 664 ILQKLEFKFPLTVSCVHFICSSIGAYIAIKVLKTKPLIEVATEDRWRRIFPMSFVFCINI 485
Query: 938 VLGNVSLRYIPVSFMQTIKSFTPATT 861
VLGNVSLRYIPVSFMQTIKSFTPATT
Sbjct: 484 VLGNVSLRYIPVSFMQTIKSFTPATT 407
Score = 170 bits (365), Expect(2) = 2e-091
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -3 / -2
Query: 860 VILQWLVWSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAE 681
VILQWLVW K+FEWRIWASL+PIVGGILLTSVTELSFN FGFCAAMVGCLATSTKTILAE
Sbjct: 291 VILQWLVWRKYFEWRIWASLIPIVGGILLTSVTELSFNTFGFCAAMVGCLATSTKTILAE 112
Query: 680 SLLHGYKFDSINTVYY 633
SLLHGYKFD +T YY
Sbjct: 111 SLLHGYKFDRYSTSYY 64
Score = 151 bits (325), Expect(2) = 2e-070
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +1 / +3
Query: 862 VVAGVKDLIVCMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGFALRTWIAM 1041
VVAGVKD +VCMKETGM RKLTFPSTMFMQ T DIGNIL RSS +T I GF RT IAM
Sbjct: 408 VVAGVKDFMVCMKETGMYRKLTFPSTMFMQNTNDIGNILLHRSSVATSISGFVFRTLIAM 587
Query: 1042 *APMEEQMKWTQDTVRGNLKSSFWKI 1119
*AP+EE MKWT DTVRGNL SSF KI
Sbjct: 588 *APIEEHMKWTHDTVRGNLNSSFCKI 665
Score = 136 bits (292), Expect(2) = 4e-052
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = -2 / -3
Query: 1110 ETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPLEKDISNVLRLLHKHCAG 931
ETG QVPS V+RPLH+LF+ SLH N + + D GGP+EKDI NV+R+LHKHCAG
Sbjct: 656 ETGVQVPSDGVVRPLHMLFYRSLHRNQSSENKATDRGCHGGPMEKDIPNVIRVLHKHCAG 477
Query: 930 KCQLALHPSLLHADNQIFHSCNH 862
+C+LA+H LLHAD++IFHSCNH
Sbjct: 476 ECELAVHSGLLHADHKIFHSCNH 408
Score = 136 bits (292), Expect(2) = 2e-070
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = +1 / +2
Query: 643 VLMLSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRH 822
VL LSNLYPWS DSAKMVFVDVARQPTMAAQKP +LKLSSVTEVR +PPTIG EA MRH
Sbjct: 74 VLYLSNLYPWSSDSAKMVFVDVARQPTMAAQKPNVLKLSSVTEVRRMPPTIGIKEAQMRH 253
Query: 823 SKCLLQTSHCRIT 861
SK L T+H RIT
Sbjct: 254 SKYFLHTNH*RIT 292
Score = 131 bits (280), Expect(2) = 3e-050
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +3 / +2
Query: 861 CGCRSERFDCLHEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGFRLEDMDCN 1040
CGCRSERF LHEGD +V QA I QHNVYAE E HW+YP P+VLR NL+Q ++ DC+
Sbjct: 407 CGCRSERFYGLHEGDRNVPQAHIPQHNVYAEHE*HWEYPSPSVLRGNLDQWLCFQNFDCD 586
Query: 1041 VSSNGRADEVDAGHGERELEIQFLED 1118
V S+ RA EVDA H +RELE+QFL++
Sbjct: 587 VGSDRRAYEVDARHRQRELELQFLQN 664
Score = 90.9 bits (192), Expect(2) = 4e-052
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / -1
Query: 861 SYSAVASLEQAFRVAHMGFAGPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGR 682
S S+V +E+ R+AH+GF PY R++ DFG+ A LQH L HG LPG+++KDH GR
Sbjct: 292 SDSSVVGVEEILRMAHLGFFDPYCGRHSSDFGN*AELQHVWLLRRHGGLPGHIHKDHFGR 113
Query: 681 VPTPWIQV*QH*HGVL 634
V PWIQ+ Q *+ +L
Sbjct: 112 VTAPWIQIRQV*YKLL 65
Score = 90.0 bits (190), Expect(2) = 3e-050
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3 / +1
Query: 654 VKLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEML 833
V+ VSME LCQ+GLC QAA+HG E + VEA+L +RSQ+ +++ RDQRSP AP E+
Sbjct: 85 VEFVSMEQ*LCQNGLCGCGQAAHHGGAEAKRVEAQLSYRSQKNASHNRDQRSPDAPFEVF 264
Query: 834 APD*PLQNNC 863
P PL+N+C
Sbjct: 265 PPHQPLKNHC 294
Score = 83.5 bits (176), Expect(2) = 4e-024
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = -1 / -2
Query: 1048 ELTLQSMSSRRNP*FKLNRRTAGKGYFQCPSSSA*TLCWEMSACATSQSPSCRQSNLSLL 869
E T QS +++ * +L RRT G+GY QC S SA*TLCW M AC T +SPSCR NLSLL
Sbjct: 594 EPTSQSKF*KQSH*SRLPRRTDGEGYSQCHSCSA*TLCWGM*ACGTFRSPSCRP*NLSLL 415
Query: 868 QPQL 857
QPQ+
Sbjct: 414 QPQV 403
Score = 75.8 bits (159), Expect(2) = 1e-026
Identities = 36/50 (72%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 860 LWLQE*KI*LSA*RRLGCSAS*HFPAQCLCRRRRTLEISFSSGPPVQLES 1009
LWLQE*KI SA*RR C+AS H PAQCLCR R TL ISFS GPP Q S
Sbjct: 406 LWLQE*KILWSA*RRPECTASSHSPAQCLCRTRMTLGISFSIGPPWQPRS 555
Score = 66.6 bits (139), Expect(2) = 1e-026
Identities = 34/68 (50%), Positives = 39/68 (57%)
Frame = +2 / +3
Query: 665 IHGVGTLPRWSL*T*PGSQPWQHRNRKC*S*ALSPKSGVFRQL*GPAKPICATRNACSRL 844
IHG TLP+WSL PGS PW+ R++ C*S A PKS *G KP CA R+ S
Sbjct: 96 IHGAVTLPKWSLWMWPGSPPWRRRSQTC*SSAQLPKSEECLPQ*GSKKPRCAIRSISSTP 275
Query: 845 ATAE*LWL 868
T E L L
Sbjct: 276 TTEESLRL 299
Score = 53.3 bits (110), Expect(2) = 4e-024
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 781 YS*LR*QSLASTFSVSVLPWLAAWLRLQRPSWQSPYSMDTSLTALTRCT 635
+ *LR* S AST S PW AAW QRP WQS SMDT+ T + + T
Sbjct: 212 FF*LR*LS*ASTRLASAPPWWAAWPHPQRPFWQSHCSMDTNSTGIVQVT 66
>gb|CW232895.1|CW232895 104_685_11213064_148_37363_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213064, DNA
sequence
Length = 642
Score = 180 bits (387), Expect(2) = 6e-089
Identities = 75/89 (84%), Positives = 83/89 (93%)
Frame = -3 / +3
Query: 653 SINTVYYMAPFATMILALPAMVLEGGGVMNWFYTHDSIVPALTIILGSGVLAFCLNFSIF 474
SINTVYYMAPFATMIL++PAMVLEG GV++W YT++S+ PAL II+ SGVLAFCLNFSIF
Sbjct: 375 SINTVYYMAPFATMILSVPAMVLEGSGVVSWLYTYESVGPALAIIVTSGVLAFCLNFSIF 554
Query: 473 YVIHSTTAVTFNVAGNLKVAVAVLVSWSI 387
YVIHSTTAVTFNVAGNLKVAVAVLVSW I
Sbjct: 555 YVIHSTTAVTFNVAGNLKVAVAVLVSWMI 641
Score = 170 bits (365), Expect(2) = 6e-089
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -3 / +3
Query: 860 VILQWLVWSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAE 681
VILQWLVW K+FEWRIWASL+PIVGGILLTSVTELSFN FGFCAAMVGCLATSTKTILAE
Sbjct: 48 VILQWLVWRKYFEWRIWASLIPIVGGILLTSVTELSFNTFGFCAAMVGCLATSTKTILAE 227
Query: 680 SLLHGYKFDSINTVYY 633
SLLHGYKFD +T YY
Sbjct: 228 SLLHGYKFDRYSTSYY 275
Score = 136 bits (292), Expect(2) = 1e-059
Identities = 59/73 (80%), Positives = 62/73 (84%)
Frame = +1 / -3
Query: 643 VLMLSNLYPWSRDSAKMVFVDVARQPTMAAQKPKMLKLSSVTEVRSIPPTIGTSEAHMRH 822
VL LSNLYPWS DSAKMVFVDVARQPTMAAQKP +LKLSSVTEVR +PPTIG EA MRH
Sbjct: 265 VLYLSNLYPWSSDSAKMVFVDVARQPTMAAQKPNVLKLSSVTEVRRMPPTIGIKEAQMRH 86
Query: 823 SKCLLQTSHCRIT 861
SK L T+H RIT
Sbjct: 85 SKYFLHTNH*RIT 47
Score = 115 bits (246), Expect(2) = 1e-059
Identities = 55/89 (61%), Positives = 61/89 (68%)
Frame = +1 / -3
Query: 388 IDHDXXXXXXXXXXXXXXNVTAVVEWMT*KMEKLRQNASTPEPRMIVSAGTMESCV*NQF 567
I HD NVTAVVEW+T*KMEKLRQ ASTP+ MI SAG +S V*+Q
Sbjct: 640 IIHDTSTATATLRLPATLNVTAVVEWIT*KMEKLRQKASTPDVTMIASAGPTDSYV*SQL 461
Query: 568 ITPPPSSTIAGRASIMVAKGAM*YTVLML 654
TP PSST+AG I+VAKGAM*YTVLML
Sbjct: 460 TTPLPSSTMAGTDRIIVAKGAM*YTVLML 374
Score = 108 bits (230), Expect(2) = 2e-043
Identities = 47/91 (51%), Positives = 60/91 (65%)
Frame = +3 / -2
Query: 387 DRPRH*HCHRDFKVACNVERHCCC*MDDVEDGEVKAERKHPRT*DDSQRRNDGIMCVEPV 566
D PRH H H +VA +VERH +D VEDGEV+AE +HPR DD QR G++ VEP
Sbjct: 641 DHPRHQHRHGHLEVAGHVERHGRRRVDHVEDGEVEAEGQHPRRDDDRQRWPHGLVRVEPA 462
Query: 567 HYTSSFKHHRW*SQYHGGKGCHVVHRVNAVK 659
H+ ++ +HH W Q H KG HVVHRV+A +
Sbjct: 461 HHAAALQHHGWH*QDHRRKGSHVVHRVDAAQ 369
Score = 90.9 bits (192), Expect(2) = 1e-029
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = -2 / +2
Query: 861 SYSAVASLEQAFRVAHMGFAGPYSWRNTPDFGDRA*LQHFRFLCCHGWLPGYVYKDHLGR 682
S S+V +E+ R+AH+GF PY R++ DFG+ A LQH L HG LPG+++KDH GR
Sbjct: 47 SDSSVVGVEEILRMAHLGFFDPYCGRHSSDFGN*AELQHVWLLRRHGGLPGHIHKDHFGR 226
Query: 681 VPTPWIQV*QH*HGVL 634
V PWIQ+ Q *+ +L
Sbjct: 227 VTAPWIQIRQV*YKLL 274
Score = 90.0 bits (190), Expect(2) = 2e-043
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3 / -2
Query: 654 VKLVSME*GLCQDGLCRRSQAANHGSTETENVEAKLCHRSQEYSANYRDQRSPYAPLEML 833
V+ VSME LCQ+GLC QAA+HG E + VEA+L +RSQ+ +++ RDQRSP AP E+
Sbjct: 254 VEFVSMEQ*LCQNGLCGCGQAAHHGGAEAKRVEAQLSYRSQKNASHNRDQRSPDAPFEVF 75
Query: 834 APD*PLQNNC 863
P PL+N+C
Sbjct: 74 PPHQPLKNHC 45
Score = 61.6 bits (128), Expect(2) = 1e-029
Identities = 33/77 (42%), Positives = 39/77 (50%)
Frame = -2 / +2
Query: 654 QH*HGVLHGTLCHHDTGSTSDGA*RRRCNELVLHT*FHRSCADYHPRFGGACVXXXXXXX 475
QH HGVLHG+LC D S S GA +R EL LH + A H GGA +
Sbjct: 374 QHQHGVLHGSLCDDDPVSASHGAGGQRRGELALHVRVRGASAGDHRHVGGAGLLPQLLHL 553
Query: 474 XXXPFNNSSDVQRCRQP 424
P ++ DVQR RQP
Sbjct: 554 LRDPLDDGRDVQRGRQP 604
>gb|CX615573.1|CX615573 GABR1_21_A01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_21_A01_A002 3', mRNA sequence
Length = 709
Score = 285 bits (616), Expect(5) = 1e-088
Identities = 121/128 (94%), Positives = 123/128 (96%)
Frame = -3 / +3
Query: 632 MAPFATMILALPAMVLEGGGVMNWFYTHDSIVPALTIILGSGVLAFCLNFSIFYVIHSTT 453
MAPFATMILALPAM+LEGGGV+NWFYTHDSIV AL IILGSGVLAFCLNFSIFYVIHSTT
Sbjct: 3 MAPFATMILALPAMLLEGGGVINWFYTHDSIVSALIIILGSGVLAFCLNFSIFYVIHSTT 182
Query: 452 AVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAP 273
AVTFNVAGNLKVAVAVLVSW IFRNPISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAP
Sbjct: 183 AVTFNVAGNLKVAVAVLVSWLIFRNPISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAP 362
Query: 272 GSLGTAQA 249
GS GTA A
Sbjct: 363 GSPGTAPA 386
Score = 273 bits (590), Expect(4) = 4e-081
Identities = 105/126 (83%), Positives = 113/126 (89%)
Frame = +3 / -3
Query: 255 RCS*TPWGCSLALRDQMPHIAIESATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKVAC 434
RCS TPWGCSL L DQMPH+AIESATNQGDST +CIHCRDWIPED+P H*H HR+FKVA
Sbjct: 380 RCSWTPWGCSLPL*DQMPHVAIESATNQGDSTSNCIHCRDWIPEDQP*H*HSHRNFKVAS 201
Query: 435 NVERHCCC*MDDVEDGEVKAERKHPRT*DDSQRRNDGIMCVEPVHYTSSFKHHRW*SQYH 614
NVE HCC *MDD+EDGEVKA+RKHP T*DD+QRRNDGIMCVEPV YT+SFK H W*SQYH
Sbjct: 200 NVESHCCR*MDDIEDGEVKAKRKHP*T*DDNQRRNDGIMCVEPVDYTTSFKQHCW*SQYH 21
Query: 615 GGKGCH 632
GGKGCH
Sbjct: 20 GGKGCH 3
Score = 235 bits (508), Expect(3) = 3e-067
Identities = 104/128 (81%), Positives = 107/128 (83%)
Frame = +1 / -1
Query: 250 ACAVPRLPGAAAWRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXX 429
A AVP LPGAAA RCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKI+HD
Sbjct: 385 AGAVPGLPGAAACRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKINHDTNTATATLRL 206
Query: 430 XXXXNVTAVVEWMT*KMEKLRQNASTPEPRMIVSAGTMESCV*NQFITPPPSSTIAGRAS 609
VTAVVEWMT*KMEKLRQNASTPEPRMI++A TMESCV*NQ ITPPPSS IAGRAS
Sbjct: 205 PATLKVTAVVEWMT*KMEKLRQNASTPEPRMIINAETMESCV*NQLITPPPSSNIAGRAS 26
Query: 610 IMVAKGAM 633
IMVAKGAM
Sbjct: 25 IMVAKGAM 2
Score = 131 bits (281), Expect(5) = 6e-064
Identities = 53/70 (75%), Positives = 55/70 (78%)
Frame = -2 / +2
Query: 462 FNNSSDVQRCRQP*SRXXXXXXXVDLPESNLCNECNRVWNHPGWLHFLWLCEASDLAAPG 283
FN+SSD QRC QP*S VDLPESNLCNECN +WNHPGWLHFLWL EASDL G
Sbjct: 173 FNDSSDFQRCWQP*SCGGCVSVMVDLPESNLCNECNWMWNHPGWLHFLWLREASDLTTAG 352
Query: 282 CSPRESRNSA 253
CSPRESRNSA
Sbjct: 353 CSPRESRNSA 382
Score = 102 bits (217), Expect(5) = 6e-064
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -2 / +2
Query: 633 HGTLCHHDTGSTSDGA*RRRCNELVLHT*FHRSCADYHPRFGGACV 496
HGTLCHHDTGSTS+ A*RR CN+LVLHT*FHR C DYHPRF GACV
Sbjct: 2 HGTLCHHDTGSTSNVA*RRWCNQLVLHT*FHRFCVDYHPRFRGACV 139
Score = 96.8 bits (205), Expect(5) = 2e-049
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = -1 / +1
Query: 421 KSRWQC*CRGRSSGIQSLQ*MQSGVESPWLVALSMAM*GI*SRSARLQPQGV*EQR 254
K RW C*C G SSGIQSLQ*MQ VESPWLVALSMA *GI*S + RLQPQGV EQR
Sbjct: 214 KLRWLC*CHG*SSGIQSLQ*MQLDVESPWLVALSMAT*GI*SHNGRLQPQGVQEQR 381
Score = 95.5 bits (202), Expect(5) = 2e-049
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -1 / +1
Query: 634 TWHPLPP*YWLYQRWCLKEEV**TGSTHMIPSFLR*LSS*VRGC 503
TWHPLPP*YWLYQ+ CLKE V* TGSTHMIPSFLR*LSS*V+GC
Sbjct: 1 TWHPLPP*YWLYQQCCLKEVV*STGSTHMIPSFLR*LSS*VQGC 132
Score = 85.8 bits (181), Expect(4) = 1e-036
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +2 / -2
Query: 500 QAPPNLG**SAQERWNHVCRTSSLHLLLQAPSLVEPVSWWQRV 628
QAP NLG**S Q+RWNHVCRTS LH LLQA LVEPVSWWQRV
Sbjct: 135 QAPLNLG**STQKRWNHVCRTS*LHHLLQATLLVEPVSWWQRV 7
Score = 69.3 bits (145), Expect(4) = 1e-036
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 281 QPGAARSDASHSHRKCNQPG*FHTRLHSLQRLD 379
QP RSDAS SHRKCNQPG*FH +LHSLQRLD
Sbjct: 354 QPAVVRSDASRSHRKCNQPG*FHIQLHSLQRLD 256
Score = 36.3 bits (73), Expect(5) = 1e-088
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 187 GARPSLHLLKRELYMYSCV 131
G++ LH LKRELYMYSCV
Sbjct: 559 GSQ*FLHFLKRELYMYSCV 615
Score = 35.0 bits (70), Expect(4) = 4e-081
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 117 PHHTRTHEYIYNSLFNK*R 173
P THEYIYNSLF K*R
Sbjct: 629 PTSPHTHEYIYNSLFKK*R 573
Score = 34.5 bits (69), Expect(5) = 6e-064
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 171 FTC*RENYICTRACV 127
FT *RENYICT ACV
Sbjct: 575 FTS*RENYICTHACV 619
Score = 34.5 bits (69), Expect(3) = 3e-067
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -1
Query: 46 F*CWRLVSQMEGGNDA 93
F* WRL+SQMEGG DA
Sbjct: 706 F*YWRLISQMEGGKDA 659
Score = 34.5 bits (69), Expect(4) = 4e-081
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 44 HSDAGD*CHKWKEETML 94
+SD GD* HKWKEE ML
Sbjct: 708 NSDTGD*YHKWKEEKML 658
Score = 33.6 bits (67), Expect(5) = 1e-088
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / +3
Query: 92 ASFPPSICDTNRQHQN 45
ASFPPSICD + Q+QN
Sbjct: 660 ASFPPSICDISLQYQN 707
Score = 31.3 bits (62), Expect(3) = 3e-067
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 128 THARVHI*FSLQQVKR 175
THA VHI*FSLQ+VK+
Sbjct: 618 THA*VHI*FSLQEVKK 571
Score = 30.9 bits (61), Expect(4) = 1e-036
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 127 HARTSTYIILSSTSEE 174
H R STYIILSS SEE
Sbjct: 619 HTRMSTYIILSSRSEE 572
Score = 30.9 bits (61), Expect(4) = 1e-036
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / -3
Query: 45 ILMLAISVTNGRRKRC 92
IL+L ++TNGRRKRC
Sbjct: 707 ILILETNITNGRRKRC 660
Score = 29.5 bits (58), Expect(5) = 6e-064
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 91 HRFLLPFVTLIASIRM 44
H FLLPFV L++SIR+
Sbjct: 661 HLFLLPFVILVSSIRI 708
Score = 29.0 bits (57), Expect(5) = 2e-049
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 93 SIVSSFHL*H*SPASE 46
SI SSFHL*+*SP SE
Sbjct: 659 SIFSSFHL*Y*SPVSE 706
Score = 28.6 bits (56), Expect(5) = 2e-049
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 278 APGSLGTAQARNQTEMLPLVVDEKQE 201
+PG+ +RNQ EMLPLV +++++
Sbjct: 366 SPGTAPANLSRNQMEMLPLVDNKQEK 443
Score = 25.4 bits (49), Expect(5) = 1e-088
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 273 RESRNSASKESDGDASPC 220
R S K+SDG+ASPC
Sbjct: 371 RNSACEPFKKSDGNASPC 424
Score = 24.9 bits (48), Expect(5) = 1e-088
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 220 LWTRSKKRFS 191
LWT SKKRFS
Sbjct: 421 LWTTSKKRFS 450
Score = 24.9 bits (48), Expect(4) = 4e-081
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 217 TTRGSISV*FLACAVPRLPG 276
+TRGSIS+*FL +PG
Sbjct: 427 STRGSISI*FLERFAGAVPG 368
Score = 24.0 bits (46), Expect(5) = 6e-064
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 219 CGREARKGLA 190
CG++ARKGLA
Sbjct: 422 CGQQARKGLA 451
Score = 22.6 bits (43), Expect(5) = 2e-049
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 173 SSLVEERIIY 144
SSL+EERIIY
Sbjct: 573 SSLLEERIIY 602
>gb|CF489987.1|CF489987 POL1_61_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_G01_A002 5', mRNA sequence
Length = 592
Score = 262 bits (566), Expect(2) = 2e-088
Identities = 106/116 (91%), Positives = 112/116 (96%)
Frame = -3 / +2
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKP 1011
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSSIGAYIAI VLK KP
Sbjct: 131 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKVLKTKP 310
Query: 1010 LIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWL 843
LI+V EDRW+RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQW+
Sbjct: 311 LIEVATEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWV 478
Score = 218 bits (471), Expect(2) = 6e-068
Identities = 93/116 (80%), Positives = 97/116 (83%)
Frame = +1 / -2
Query: 844 SHCRITVVAGVKDLIVCMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGFAL 1023
+H RITVVAGVKD +VCMKETGM RKLTFPSTMFMQ T DIGNIL RSS +T I GF
Sbjct: 477 TH*RITVVAGVKDFMVCMKETGMYRKLTFPSTMFMQNTNDIGNILLHRSSVATSISGFVF 298
Query: 1024 RTWIAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
RT IAM*AP+EE MKWT DTVRGNL SSFWKIHL MMMTVTL PHHWRMASTAR V
Sbjct: 297 RTLIAM*APIEEHMKWTHDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMASTARMV 130
Score = 187 bits (403), Expect(2) = 2e-053
Identities = 76/111 (68%), Positives = 89/111 (80%)
Frame = +3 / -1
Query: 846 PLQNNCGCRSERFDCLHEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGFRLE 1025
PL+N+CGCRSERF LHEGD +V QA I QHNVYAE E HW+YP P+VLR NL+Q +
Sbjct: 475 PLKNHCGCRSERFYGLHEGDRNVPQAHIPQHNVYAEHE*HWEYPSPSVLRGNLDQWLCFQ 296
Query: 1026 DMDCNVSSNGRADEVDAGHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEH 1178
+ DC+V S+ RA EVDA H +RELE+QFLEDPLV DDD DVE+PPLEDGEH
Sbjct: 295 NFDCDVGSDRRAYEVDARHRQRELELQFLEDPLVDDDDGDVESPPLEDGEH 143
Score = 179 bits (385), Expect(2) = 4e-049
Identities = 69/105 (65%), Positives = 85/105 (80%)
Frame = -2 / +1
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVG+QRH HHH+QVDLPETG QVPS V+RPLH+LF+ SLH N + + D GGP+
Sbjct: 160 VVGIQRHRHHHQQVDLPETGVQVPSDGVVRPLHMLFYRSLHRNQSSENKATDRGCHGGPM 339
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLHADNQIFHSCNHSYSAV 847
EKDI NV+R+LHKHCAG+C+LA+H LLHAD++IFHSCNHS S+V
Sbjct: 340 EKDIPNVIRVLHKHCAGECELAVHSGLLHADHKIFHSCNHSDSSV 474
Score = 86.3 bits (182), Expect(2) = 2e-088
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = -3 / +1
Query: 839 WSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFC 732
W K+FEWRIWASL+PIVGGILLTSVTELSFN FGFC
Sbjct: 484 WRKYFEWRIWASLIPIVGGILLTSVTELSFNTFGFC 591
Score = 78.0 bits (164), Expect(3) = 1e-025
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +2 / -3
Query: 848 TAE*LWLQE*KI*LSA*RRLGCSAS*HFPAQCLCRRRRTLEISFSSGPPVQLES 1009
T E LWLQE*KI SA*RR C+AS H PAQCLCR R TL ISFS GPP Q S
Sbjct: 473 TEESLWLQE*KILWSA*RRPECTASSHSPAQCLCRTRMTLGISFSIGPPWQPRS 312
Score = 61.6 bits (128), Expect(2) = 6e-068
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +1 / -3
Query: 733 QKPKMLKLSSVTEVRSIPPTIGTSEAHMRHSKCLL 837
QKP +LKLSSVTEVR +PPTIG EA MRHSK L
Sbjct: 590 QKPNVLKLSSVTEVRRMPPTIGIKEAQMRHSKYFL 486
Score = 49.2 bits (101), Expect(3) = 1e-025
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2 / -3
Query: 1034 LQCKLQWKXXXXXXXXXXXXX*NPVSGRSTCS***Q*R*SPTTGGW 1171
L+C+L+ K * PVSGRSTC ***+*R* PTTGGW
Sbjct: 287 LRCRLR*KSI*SGRTTPSEGT*TPVSGRSTC****R*R*IPTTGGW 150
Score = 44.1 bits (90), Expect(2) = 2e-053
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3 / -2
Query: 735 ETENVEAKLCHRSQEYSANYRDQRSPYAPLEMLAP 839
E + VEA+L +RSQ+ + + RDQRSP AP E+ P
Sbjct: 588 EAKRVEAQLSYRSQKNATHNRDQRSPDAPFEVFPP 484
Score = 38.2 bits (77), Expect(2) = 4e-049
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -2 / +3
Query: 840 LEQAFRVAHMGFAGPYSWRNTPDFGDRA*LQH 745
+E+ R+AH+GF PY ++ DFG+ A LQH
Sbjct: 483 VEEILRMAHLGFFDPYCGWHSSDFGN*AELQH 578
Score = 29.0 bits (57), Expect(3) = 1e-025
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 734 RNRKC*S*ALSPKSGVFRQL*GPAKPICATRNACS 838
R++ C*S A PKS *G KP CA R+ S
Sbjct: 589 RSQTC*SSAQLPKSEECHPQ*GSKKPRCAIRSISS 485
>gb|BI246029.1|BI246029 IP1_66_G09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 301 bits (652), Expect = 1e-080
Identities = 127/140 (90%), Positives = 129/140 (92%)
Frame = -3 / +1
Query: 1274 HLRHLAHEYNTLVLVEMEDGGKAPAGLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFK 1095
HL + + L EMEDGGKAPA LGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFK
Sbjct: 79 HLLFFSSTIH*LWKEEMEDGGKAPASLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFK 258
Query: 1094 FPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLR 915
FPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLR
Sbjct: 259 FPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLR 438
Query: 914 YIPVSFMQTIKSFTPATTVI 855
YIPVSFMQTIKSFTPATTVI
Sbjct: 439 YIPVSFMQTIKSFTPATTVI 498
Score = 284 bits (614), Expect = 2e-075
Identities = 123/141 (87%), Positives = 127/141 (90%)
Frame = +1 / -1
Query: 853 RITVVAGVKDLIVCMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGFALRTW 1032
RITVVAGVKDLIVCMKETGM*R+LTFPSTMFMQKT DIGNI FQRSSGST*I GFAL TW
Sbjct: 500 RITVVAGVKDLIVCMKETGM*RRLTFPSTMFMQKTNDIGNIRFQRSSGST*ISGFALSTW 321
Query: 1033 IAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRVPRPAGAL 1212
IAM*AP+EEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRVPR AGAL
Sbjct: 320 IAM*APIEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRVPRLAGAL 141
Query: 1213 PPSSISTKTSVLYSCARWRRW 1275
PPSSIS+ S + RRW
Sbjct: 140 PPSSISSFHS*CIVDEKKRRW 78
Score = 256 bits (554), Expect = 4e-067
Identities = 101/126 (80%), Positives = 105/126 (83%)
Frame = +3 / -3
Query: 855 NNCGCRSERFDCLHEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGFRLEDMD 1034
NNCGCRSERFDCLHEGDW+VAQA ISQHNVYAEDE HWKYP PAVLRFNLNQ FRL+ MD
Sbjct: 498 NNCGCRSERFDCLHEGDWNVAQAHISQHNVYAEDERHWKYPLPAVLRFNLNQRFRLKHMD 319
Query: 1035 CNVSSNGRADEVDAGHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEHXXXXXXXXXXXX 1214
CNVSSN RADEVD GHGER+LEIQFLEDPLVHDDD DVEAPPLEDGEH
Sbjct: 318 CNVSSN*RADEVDTGHGERKLEIQFLEDPLVHDDDGDVEAPPLEDGEHRAQGAQAGRRLA 139
Query: 1215 XVLHLY 1232
VLHL+
Sbjct: 138 AVLHLF 121
Score = 230 bits (496), Expect = 4e-059
Identities = 91/103 (88%), Positives = 94/103 (91%)
Frame = -2 / +3
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVGLQRH HHHEQVDLPETGFQV SHRVL PLHLLF+WSLHCNPC GET DSS*TGGPL
Sbjct: 192 VVGLQRHRHHHEQVDLPETGFQVSSHRVLCPLHLLFNWSLHCNPCA*GETADSS*TGGPL 371
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLHADNQIFHSCNHSYS 853
E DISNV+RLLHKHCAGKC+ ALH SLLHADNQIFHSCNHSYS
Sbjct: 372 EADISNVVRLLHKHCAGKCEPALHSSLLHADNQIFHSCNHSYS 500
Score = 177 bits (380), Expect = 4e-043
Identities = 84/106 (79%), Positives = 85/106 (80%)
Frame = +2 / -2
Query: 854 E*LWLQE*KI*LSA*RRLGCSAS*HFPAQCLCRRRRTLEISFSSGPPVQLESGVSP*GHG 1033
E*LWLQE*KI*LSA*RRL CSA HFPAQCLCRRR TLEIS SSGPPVQLES VSP* HG
Sbjct: 499 E*LWLQE*KI*LSA*RRLECSAGSHFPAQCLCRRRTTLEISASSGPPVQLESAVSP*AHG 320
Query: 1034 LQCKLQWKXXXXXXXXXXXXX*NPVSGRSTCS***Q*R*SPTTGGW 1171
LQCKLQ K *NPVSGRSTCS***+*R*SPTTGGW
Sbjct: 319 LQCKLQLKSR*SGHRTR*EET*NPVSGRSTCS***R*R*SPTTGGW 182
Score = 133 bits (285), Expect = 6e-030
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = -1 / +2
Query: 1048 ELTLQSMSSRRNP*FKLNRRTAGKGYFQCPSSSA*TLCWEMSACATSQSPSCRQSNLSLL 869
ELTLQSM RRN *FKLNRRTAG GYFQC SSSA*TLCWEM ACAT QSPSCRQSNLSLL
Sbjct: 305 ELTLQSMCLRRNR*FKLNRRTAGSGYFQCRSSSA*TLCWEM*ACATFQSPSCRQSNLSLL 484
Query: 868 QPQLF 854
QPQLF
Sbjct: 485 QPQLF 499
>gb|BF587512.1|BF587512 FM1_37_C12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 644
Score = 228 bits (492), Expect(5) = 3e-068
Identities = 98/103 (95%), Positives = 98/103 (95%)
Frame = -3 / +2
Query: 557 YTHDSIVPALTIILGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRN 378
YTHDSIV AL IILGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSW IFRN
Sbjct: 2 YTHDSIVSALIIILGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRN 181
Query: 377 PISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAPGSLGTAQA 249
PISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAPGS GTA A
Sbjct: 182 PISAMNAIGCGITLVGCTFYGYVRHLISQRQAAAPGSPGTAPA 310
Score = 221 bits (478), Expect(4) = 1e-064
Identities = 86/103 (83%), Positives = 92/103 (89%)
Frame = +3 / -2
Query: 249 CLRCS*TPWGCSLALRDQMPHIAIESATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKV 428
C RCS TPWGCSL L DQMPH+AIESATNQGDST +CIHCRDWIPED+P H*H HRDFKV
Sbjct: 310 CRRCSWTPWGCSLPL*DQMPHVAIESATNQGDSTSNCIHCRDWIPEDQP*H*HSHRDFKV 131
Query: 429 ACNVERHCCC*MDDVEDGEVKAERKHPRT*DDSQRRNDGIMCV 557
A NVE HCC *MDD+EDGEVKA+RKHP T*DD+QRRNDGIMCV
Sbjct: 130 ASNVESHCCR*MDDIEDGEVKAKRKHP*T*DDNQRRNDGIMCV 2
Score = 183 bits (395), Expect(5) = 1e-054
Identities = 81/103 (78%), Positives = 84/103 (81%)
Frame = +1 / -3
Query: 250 ACAVPRLPGAAAWRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXX 429
A AVP LPGAAA RCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKI+HD
Sbjct: 309 AGAVPGLPGAAACRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKINHDTNTATATLRL 130
Query: 430 XXXXNVTAVVEWMT*KMEKLRQNASTPEPRMIVSAGTMESCV* 558
VTAVVEWMT*KMEKLRQNASTPEPRMI++A TMESCV*
Sbjct: 129 PATLKVTAVVEWMT*KMEKLRQNASTPEPRMIINAETMESCV* 1
Score = 137 bits (293), Expect(4) = 6e-047
Identities = 55/72 (76%), Positives = 57/72 (79%)
Frame = -2 / +1
Query: 462 FNNSSDVQRCRQP*SRXXXXXXXVDLPESNLCNECNRVWNHPGWLHFLWLCEASDLAAPG 283
FN+SSD QRC QP*SR VDLPESNLCNECN +WNHPGWLHFLWL EASDL G
Sbjct: 97 FNDSSDFQRCWQP*SRGGCVSVMVDLPESNLCNECNWMWNHPGWLHFLWLREASDLTTAG 276
Query: 282 CSPRESRNSASK 247
CSPRESRNSA K
Sbjct: 277 CSPRESRNSACK 312
Score = 100 bits (214), Expect(4) = 2e-029
Identities = 47/58 (81%), Positives = 48/58 (82%)
Frame = -1 / +3
Query: 421 KSRWQC*CRGRSSGIQSLQ*MQSGVESPWLVALSMAM*GI*SRSARLQPQGV*EQRKQ 248
KSRW C*C G SSGIQSLQ*MQ VESPWLVALSMA *GI*S + RLQPQGV EQR Q
Sbjct: 138 KSRWLC*CHG*SSGIQSLQ*MQLDVESPWLVALSMAT*GI*SHNGRLQPQGVQEQRLQ 311
Score = 50.6 bits (104), Expect(4) = 6e-047
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 558 LHT*FHRSCADYHPRFGGACV 496
LHT*FHR C DYHPRF GACV
Sbjct: 1 LHT*FHRFCVDYHPRFRGACV 63
Score = 40.5 bits (82), Expect(4) = 2e-029
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -1 / +3
Query: 556 THMIPSFLR*LSS*VRGC 503
THMIPSFLR*LSS*V+GC
Sbjct: 3 THMIPSFLR*LSS*VQGC 56
Score = 33.6 bits (67), Expect(4) = 6e-047
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 171 FTC*RENYICTRACV 127
FT *RENYICT ACV
Sbjct: 500 FTS*RENYICTYACV 544
Score = 33.6 bits (67), Expect(5) = 3e-068
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1 / +1
Query: 187 GARPSLHLLKRELYMYSCV 131
G++ LH LKRELYMY CV
Sbjct: 484 GSQ*FLHFLKRELYMYLCV 540
Score = 33.1 bits (66), Expect(4) = 1e-064
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 117 PHHTRTHEYIYNSLFNK*R 173
P TH+YIYNSLF K*R
Sbjct: 554 PTSPHTHKYIYNSLFKK*R 498
Score = 31.3 bits (62), Expect(5) = 1e-054
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 128 THARVHI*FSLQQVKR 175
THA VHI*FSLQ+VK+
Sbjct: 543 THA*VHI*FSLQEVKK 496
Score = 26.7 bits (52), Expect(5) = 1e-054
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 214 STTRGSISV*FLACAVPRLPG 276
S+TRGSIS+*FL +PG
Sbjct: 354 SSTRGSISI*FLERFAGAVPG 292
Score = 25.8 bits (50), Expect(5) = 3e-068
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 219 CGREARKGLA 190
CGR+ARKGLA
Sbjct: 346 CGRQARKGLA 375
Score = 25.8 bits (50), Expect(4) = 1e-064
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 56 GD*CHKWKEETML 94
GD* KWKEE ML
Sbjct: 621 GD*YQKWKEEKML 583
Score = 25.4 bits (49), Expect(5) = 3e-068
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 273 RESRNSASKESDGDASPC 220
R S K+SDG+ASPC
Sbjct: 295 RNSACKPFKKSDGNASPC 348
Score = 25.4 bits (49), Expect(4) = 1e-064
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1 / -3
Query: 148 IILSSTSEEKA*HHC*TFSCFSST 219
I L TS C*TFSC SST
Sbjct: 417 ICLYCTSSTAEMPTC*TFSCLSST 346
Score = 24.9 bits (48), Expect(4) = 6e-047
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 220 LWTRSKKRFS 191
LWT SKKRFS
Sbjct: 345 LWTTSKKRFS 374
Score = 24.9 bits (48), Expect(5) = 1e-054
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 188 IAKPFLASRPQ 220
+AKPFLA RPQ
Sbjct: 377 LAKPFLACRPQ 345
Score = 23.5 bits (45), Expect(5) = 3e-068
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 93 SIVSSFHL*H*SPA 52
SI SSFH *+*SP+
Sbjct: 584 SIFSSFHF*Y*SPS 625
Score = 23.1 bits (44), Expect(5) = 1e-054
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / -1
Query: 63 SVTNGRRKRC 92
++ NGRRKRC
Sbjct: 614 NIKNGRRKRC 585
Score = 22.6 bits (43), Expect(4) = 2e-029
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 173 SSLVEERIIY 144
SSL+EERIIY
Sbjct: 498 SSLLEERIIY 527
Score = 22.6 bits (43), Expect(4) = 2e-029
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 221 VVDEKQEKV*Q 189
+VD+KQEKV*Q
Sbjct: 344 LVDDKQEKV*Q 376
>gb|BI245542.1|BI245542 IP1_66_G09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 189 bits (408), Expect(5) = 2e-060
Identities = 80/83 (96%), Positives = 80/83 (96%)
Frame = -3 / +3
Query: 497 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFY 318
FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSW IFRNPISAMNAIGCGITLVGCTFY
Sbjct: 3 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISAMNAIGCGITLVGCTFY 182
Query: 317 GYVRHLISQRQAAAPGSLGTAQA 249
GYVRHLISQRQAAAPGS GTA A
Sbjct: 183 GYVRHLISQRQAAAPGSPGTAPA 251
Score = 172 bits (371), Expect(4) = 1e-051
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +3 / -3
Query: 255 RCS*TPWGCSLALRDQMPHIAIESATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKVAC 434
RCS TPWGCSL L DQMPH+AIESATNQGDST +CIHCRDWIPED+P H*H HR+FKVA
Sbjct: 245 RCSWTPWGCSLPL*DQMPHVAIESATNQGDSTSNCIHCRDWIPEDQP*H*HSHRNFKVAS 66
Query: 435 NVERHCCC*MDDVEDGEVKAE 497
NVE HCC *MDD+EDGEVKA+
Sbjct: 65 NVESHCCR*MDDIEDGEVKAK 3
Score = 144 bits (310), Expect(3) = 2e-040
Identities = 64/83 (77%), Positives = 65/83 (78%)
Frame = +1 / -1
Query: 250 ACAVPRLPGAAAWRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXX 429
A AVP LPGAAA RCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKI+HD
Sbjct: 250 AGAVPGLPGAAACRCEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKINHDTNTATATLRL 71
Query: 430 XXXXNVTAVVEWMT*KMEKLRQN 498
VTAVVEWMT*KMEKLRQN
Sbjct: 70 PATLKVTAVVEWMT*KMEKLRQN 2
Score = 131 bits (281), Expect(4) = 4e-039
Identities = 53/70 (75%), Positives = 55/70 (78%)
Frame = -2 / +2
Query: 462 FNNSSDVQRCRQP*SRXXXXXXXVDLPESNLCNECNRVWNHPGWLHFLWLCEASDLAAPG 283
FN+SSD QRC QP*S VDLPESNLCNECN +WNHPGWLHFLWL EASDL G
Sbjct: 38 FNDSSDFQRCWQP*SCGGCVSVMVDLPESNLCNECNWMWNHPGWLHFLWLREASDLTTAG 217
Query: 282 CSPRESRNSA 253
CSPRESRNSA
Sbjct: 218 CSPRESRNSA 247
Score = 96.8 bits (205), Expect(4) = 1e-026
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = -1 / +1
Query: 421 KSRWQC*CRGRSSGIQSLQ*MQSGVESPWLVALSMAM*GI*SRSARLQPQGV*EQR 254
K RW C*C G SSGIQSLQ*MQ VESPWLVALSMA *GI*S + RLQPQGV EQR
Sbjct: 79 KLRWLC*CHG*SSGIQSLQ*MQLDVESPWLVALSMAT*GI*SHNGRLQPQGVQEQR 246
Score = 36.3 bits (73), Expect(5) = 2e-060
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 187 GARPSLHLLKRELYMYSCV 131
G++ LH LKRELYMYSCV
Sbjct: 424 GSQ*FLHFLKRELYMYSCV 480
Score = 35.0 bits (70), Expect(4) = 1e-051
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 117 PHHTRTHEYIYNSLFNK*R 173
P THEYIYNSLF K*R
Sbjct: 494 PTSPHTHEYIYNSLFKK*R 438
Score = 34.5 bits (69), Expect(4) = 4e-039
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 171 FTC*RENYICTRACV 127
FT *RENYICT ACV
Sbjct: 440 FTS*RENYICTHACV 484
Score = 34.5 bits (69), Expect(3) = 2e-040
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / -1
Query: 46 F*CWRLVSQMEGGNDA 93
F* WRL+SQMEGG DA
Sbjct: 571 F*YWRLISQMEGGKDA 524
Score = 34.5 bits (69), Expect(4) = 1e-051
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 44 HSDAGD*CHKWKEETML 94
+SD GD* HKWKEE ML
Sbjct: 573 NSDTGD*YHKWKEEKML 523
Score = 33.6 bits (67), Expect(5) = 2e-060
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / +3
Query: 92 ASFPPSICDTNRQHQN 45
ASFPPSICD + Q+QN
Sbjct: 525 ASFPPSICDISLQYQN 572
Score = 31.3 bits (62), Expect(3) = 2e-040
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 128 THARVHI*FSLQQVKR 175
THA VHI*FSLQ+VK+
Sbjct: 483 THA*VHI*FSLQEVKK 436
Score = 29.5 bits (58), Expect(4) = 4e-039
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 91 HRFLLPFVTLIASIRM 44
H FLLPFV L++SIR+
Sbjct: 526 HLFLLPFVILVSSIRI 573
Score = 29.0 bits (57), Expect(4) = 1e-026
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 93 SIVSSFHL*H*SPASE 46
SI SSFHL*+*SP SE
Sbjct: 524 SIFSSFHL*Y*SPVSE 571
Score = 28.6 bits (56), Expect(4) = 1e-026
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 278 APGSLGTAQARNQTEMLPLVVDEKQE 201
+PG+ +RNQ EMLPLV +++++
Sbjct: 231 SPGTAPANLSRNQMEMLPLVDNKQEK 308
Score = 25.4 bits (49), Expect(5) = 2e-060
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 273 RESRNSASKESDGDASPC 220
R S K+SDG+ASPC
Sbjct: 236 RNSACEPFKKSDGNASPC 289
Score = 24.9 bits (48), Expect(4) = 1e-051
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 217 TTRGSISV*FLACAVPRLPG 276
+TRGSIS+*FL +PG
Sbjct: 292 STRGSISI*FLERFAGAVPG 233
Score = 24.9 bits (48), Expect(5) = 2e-060
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 220 LWTRSKKRFS 191
LWT SKKRFS
Sbjct: 286 LWTTSKKRFS 315
Score = 24.0 bits (46), Expect(4) = 4e-039
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 219 CGREARKGLA 190
CG++ARKGLA
Sbjct: 287 CGQQARKGLA 316
Score = 22.6 bits (43), Expect(4) = 1e-026
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 173 SSLVEERIIY 144
SSL+EERIIY
Sbjct: 438 SSLLEERIIY 467
>gb|BG357722.1|BG357722 OV2_29_E09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 602
Score = 223 bits (482), Expect = 4e-057
Identities = 90/99 (90%), Positives = 95/99 (95%)
Frame = -3 / +1
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKP 1011
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSSIGAYIAI VLK KP
Sbjct: 304 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKVLKTKP 483
Query: 1010 LIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFM 894
LI+V EDRW+RIFPMSFVFCINIVLGNVSLRYIPVSFM
Sbjct: 484 LIEVATEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFM 600
Score = 192 bits (414), Expect = 9e-048
Identities = 81/100 (81%), Positives = 83/100 (83%)
Frame = +1 / -1
Query: 892 CMKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGFALRTWIAM*APMEEQMKW 1071
CMKETGM RKLTFPSTMFMQ T DIGNIL RSS +T I GF RT IAM*AP+EE MKW
Sbjct: 602 CMKETGMYRKLTFPSTMFMQNTNDIGNILLHRSSVATSISGFVFRTLIAM*APIEEHMKW 423
Query: 1072 TQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
T DTVRGNL SSFWKIHL MMMTVTL PHHWRMASTAR V
Sbjct: 422 THDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMASTARMV 303
Score = 157 bits (337), Expect = 4e-037
Identities = 64/95 (67%), Positives = 75/95 (78%)
Frame = +3 / -3
Query: 894 HEGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGFRLEDMDCNVSSNGRADEVD 1073
HEGD +V QA I QHNVYAE E HW+YP P+VLR NL+Q ++ DC+V S+ RA EVD
Sbjct: 600 HEGDRNVPQAHIPQHNVYAEHE*HWEYPSPSVLRGNLDQWLCFQNFDCDVGSDRRAYEVD 421
Query: 1074 AGHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEH 1178
A H +RELE+QFLEDPLV DDD DVE+PPLEDGEH
Sbjct: 420 ARHRQRELELQFLEDPLVDDDDGDVESPPLEDGEH 316
Score = 150 bits (322), Expect = 4e-035
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = -2 / +3
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVG+QRH HHH+QVDLPETG QVPS V+RPLH+LF+ SLH N + + D GGP+
Sbjct: 333 VVGIQRHRHHHQQVDLPETGVQVPSDGVVRPLHMLFYRSLHRNQSSENKATDRGCHGGPM 512
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLHA 892
EKDI NV+R+LHKHCAG+C+LA+H LLHA
Sbjct: 513 EKDIPNVIRVLHKHCAGECELAVHSGLLHA 602
>gb|CF485313.1|CF485313 POL1_30_F07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_F07_A002 5', mRNA sequence
Length = 647
Score = 218 bits (471), Expect = 1e-055
Identities = 88/98 (89%), Positives = 93/98 (94%)
Frame = -3 / +1
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKP 1011
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSSIGAYIAI V K KP
Sbjct: 352 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKVQKTKP 531
Query: 1010 LIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSF 897
LI+V EDRW+RIFPMSFVFCINIVLGNVSLRYIPVSF
Sbjct: 532 LIEVATEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSF 645
Score = 184 bits (396), Expect = 3e-045
Identities = 79/99 (79%), Positives = 81/99 (81%)
Frame = +1 / -1
Query: 895 MKETGM*RKLTFPSTMFMQKTKDIGNILFQRSSGST*IRGFALRTWIAM*APMEEQMKWT 1074
MKETGM RKLTFPSTMFMQ T DIGNIL RSS +T I GF T IAM*AP+EE MKWT
Sbjct: 647 MKETGMYRKLTFPSTMFMQNTNDIGNILLHRSSVATSISGFVF*TLIAM*APIEEHMKWT 468
Query: 1075 QDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
DTVRGNL SSFWKIHL MMMTVTL PHHWRMASTAR V
Sbjct: 467 HDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMASTARMV 351
Score = 151 bits (324), Expect = 2e-035
Identities = 63/94 (67%), Positives = 73/94 (77%)
Frame = +3 / -3
Query: 897 EGDWDVAQADISQHNVYAEDEGHWKYPFPAVLRFNLNQGFRLEDMDCNVSSNGRADEVDA 1076
EGD +V QA I QHNVYAE E HW+YP P+VLR NL+Q + DC+V S+ RA EVDA
Sbjct: 645 EGDRNVPQAHIPQHNVYAEHE*HWEYPSPSVLRGNLDQWLCFLNFDCDVGSDRRAYEVDA 466
Query: 1077 GHGERELEIQFLEDPLVHDDDSDVEAPPLEDGEH 1178
H +RELE+QFLEDPLV DDD DVE+PPLEDGEH
Sbjct: 465 RHRQRELELQFLEDPLVDDDDGDVESPPLEDGEH 364
Score = 148 bits (318), Expect = 2e-034
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = -2 / +3
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TGGPL 982
VVG+QRH HHH+QVDLPETG QVPS V+RPLH+LF+ SLH N + + D GGP+
Sbjct: 381 VVGIQRHRHHHQQVDLPETGVQVPSDGVVRPLHMLFYRSLHRNQSSENKATDRGCHGGPM 560
Query: 981 EKDISNVLRLLHKHCAGKCQLALHPSLLH 895
EKDI NV+R+LHKHCAG+C+LA+H LLH
Sbjct: 561 EKDIPNVIRVLHKHCAGECELAVHSGLLH 647
>gb|CW203848.1|CW203848 104_631_11186229_148_37093_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186229, DNA
sequence
Length = 676
Score = 213 bits (459), Expect = 6e-054
Identities = 88/111 (79%), Positives = 100/111 (90%)
Frame = -3 / -1
Query: 614 MILALPAMVLEGGGVMNWFYTHDSIVPALTIILGSGVLAFCLNFSIFYVIHSTTAVTFNV 435
MIL++PAM+L GV++W YT++S+ PAL II+ SGVLAFCLNFSIFYVIHSTTAVTFNV
Sbjct: 676 MILSVPAMLLRCSGVVSWLYTYESVGPALAIIVTSGVLAFCLNFSIFYVIHSTTAVTFNV 497
Query: 434 AGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHLISQRQA 282
AGNLKVAVAVLVSW IFRNPISAMNA+G +TLVGC+FYGYVRHLISQ QA
Sbjct: 496 AGNLKVAVAVLVSWMIFRNPISAMNAVG*AVTLVGCSFYGYVRHLISQHQA 344
Score = 133 bits (285), Expect = 6e-030
Identities = 61/103 (59%), Positives = 70/103 (67%)
Frame = +1 / +3
Query: 292 CEIRCLT*P*KVQPTRVIPHPIAFIAEIGFRKIDHDXXXXXXXXXXXXXXNVTAVVEWMT 471
CE+RCLT*P*K QPT V P AF+AE+GFRKI HD NVTAVVEW+T
Sbjct: 354 CEMRCLT*P*KEQPTSVTAQPTAFMAEMGFRKIIHDTSTATATLRLPATLNVTAVVEWIT 533
Query: 472 *KMEKLRQNASTPEPRMIVSAGTMESCV*NQFITPPPSSTIAG 600
*KMEKLRQ ASTP+ MI SAG +S V*+Q TP S++AG
Sbjct: 534 *KMEKLRQKASTPDVTMIASAGPTDSYV*SQLTTPLHLSSMAG 662
Score = 128 bits (274), Expect = 2e-028
Identities = 54/110 (49%), Positives = 74/110 (67%)
Frame = +3 / +2
Query: 285 LALRDQMPHIAIESATNQGDSTPDCIHCRDWIPEDRPRH*HCHRDFKVACNVERHCCC*M 464
L LRD++PH+A+E A ++ DS+ D +H RD +PED PRH H H +VA +VERH +
Sbjct: 347 LMLRDEVPHVAVEGAADERDSSADGVHGRDGVPEDHPRHQHRHGHLEVAGHVERHGRRRV 526
Query: 465 DDVEDGEVKAERKHPRT*DDSQRRNDGIMCVEPVHYTSSFKHHRW*SQYH 614
D VEDGEV+AE +HPR DD QR G++ VEP H+ ++ + H W Q H
Sbjct: 527 DHVEDGEVEAEGQHPRRDDDRQRWPHGLVRVEPAHHAAAPQQHGWH*QDH 676
>gb|BG158765.1|BG158765 RHIZ2_44_A05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 376
Score = 191 bits (412), Expect = 2e-047
Identities = 78/79 (98%), Positives = 78/79 (98%)
Frame = -3 / +3
Query: 1229 EMEDGGKAPAGLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI 1050
EMEDGGKAPA LGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI
Sbjct: 138 EMEDGGKAPASLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSI 317
Query: 1049 GAYIAIHVLKAKPLIQVEP 993
GAYIAIHVLKAKPLIQVEP
Sbjct: 318 GAYIAIHVLKAKPLIQVEP 374
Score = 177 bits (381), Expect = 3e-043
Identities = 75/81 (92%), Positives = 77/81 (95%)
Frame = +1 / -1
Query: 991 SGST*IRGFALRTWIAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRM 1170
SGST*I GFAL TWIAM*AP+EEQMK TQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRM
Sbjct: 376 SGST*ISGFALSTWIAM*APIEEQMKCTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRM 197
Query: 1171 ASTARRVPRPAGALPPSSIST 1233
ASTARRVPR AGALPPSSIS+
Sbjct: 196 ASTARRVPRLAGALPPSSISS 134
Score = 140 bits (301), Expect = 4e-032
Identities = 58/80 (72%), Positives = 61/80 (76%)
Frame = +3 / -3
Query: 993 RFNLNQGFRLEDMDCNVSSNGRADEVDAGHGERELEIQFLEDPLVHDDDSDVEAPPLEDG 1172
RFNLNQ FRL+ MDCNVSSN RADEV GHGER+LEIQFLEDPLVHDDD DVEAPPLEDG
Sbjct: 374 RFNLNQRFRLKHMDCNVSSN*RADEVHTGHGERKLEIQFLEDPLVHDDDGDVEAPPLEDG 195
Query: 1173 EHXXXXXXXXXXXXXVLHLY 1232
EH VLHL+
Sbjct: 194 EHRAQGAQAGRRLAAVLHLF 135
Score = 122 bits (260), Expect = 2e-026
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = -2 / +2
Query: 1161 VVGLQRHCHHHEQVDLPETGFQVPSHRVLRPLHLLFHWSLHCNPCPQGETPDSS*TG 991
VVGLQRH HHHEQVDLPETGFQV SHRVL LHLLF+WSLHCNPC GET DSS*TG
Sbjct: 206 VVGLQRHRHHHEQVDLPETGFQVSSHRVLCALHLLFNWSLHCNPCA*GETADSS*TG 376
>gb|CW446397.1|CW446397 fsbb001f179a13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179a13, DNA
sequence
Length = 611
Score = 149 bits (321), Expect = 6e-035
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = -3 / +3
Query: 479 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHL 300
IFYVIHSTTAVTFNVAGNLKVAVAVLVSW IFRNPISAMNA+GC +TLVGCTFYGYVRHL
Sbjct: 3 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAVTLVGCTFYGYVRHL 182
Query: 299 ISQRQA 282
ISQ QA
Sbjct: 183 ISQHQA 200
>gb|BG357409.1|BG357409 OV2_29_E09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 148 bits (317), Expect = 2e-034
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = -3 / +3
Query: 476 FYVIHSTTAVTFNVAGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHLI 297
FYVIHSTTAVTFNVAGNLKVAVAVLVSW IFRNPISAMNA+GC +TLVGCTFYGYVRHLI
Sbjct: 3 FYVIHSTTAVTFNVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAVTLVGCTFYGYVRHLI 182
Query: 296 SQRQA 282
SQ QA
Sbjct: 183 SQHQA 197
>gb|CB925815.1|CB925815 ABA1_23_D08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_D08_A012 5', mRNA sequence
Length = 610
Score = 145 bits (311), Expect = 1e-033
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3 / +3
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKP 1011
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSSIGAYIAI VLK KP
Sbjct: 414 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKVLKTKP 593
Query: 1010 LIQV 999
LI+V
Sbjct: 594 LIEV 605
Score = 127 bits (271), Expect = 5e-028
Identities = 52/65 (80%), Positives = 54/65 (83%)
Frame = +1 / -1
Query: 997 ST*IRGFALRTWIAM*APMEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMAS 1176
+T I GF RT IAM*AP+EE MKWT DTVRGNL SSFWKIHL MMMTVTL PHHWRMAS
Sbjct: 607 ATSISGFVFRTLIAM*APIEEHMKWTHDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMAS 428
Query: 1177 TARRV 1191
TAR V
Sbjct: 427 TARMV 413
>gb|CX615201.1|CX615201 GABR1_18_F03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_18_F03_A002 5', mRNA sequence
Length = 779
Score = 134 bits (287), Expect = 3e-030
Identities = 59/176 (33%), Positives = 99/176 (56%)
Frame = -3 / +1
Query: 1199 GLGTLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLK 1020
G G L V + W+ N+ V+++NK++ FK+P+ ++ H S+ +Y AI L+
Sbjct: 190 GKGRLFTVGLVTAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMSACSLFSYAAIAWLR 369
Query: 1019 AKPLIQVEPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLV 840
P+ + +I +S VFC ++V GN+SLRY+PVSF Q + + TP T + +L+
Sbjct: 370 IVPMQLPRSRLQLAKIAALSLVFCASVVSGNISLRYLPVSFNQAVGATTPFFTAVFAYLM 549
Query: 839 WSKHFEWRIWASLVPIVGGILLTSVTELSFNIFGFCAAMVGCLATSTKTILAESLL 672
K + + +LVP+V G+++ S E SFN+FGF + A + KT+L L+
Sbjct: 550 TVKRESFLTYLALVPVVTGVIIASGGEPSFNLFGFIMCVGATAARALKTVLQGILM 717
>gb|CW276613.1|CW276613 104_750_11405585_116_35394_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405585, DNA
sequence
Length = 658
Score = 115 bits (245), Expect = 2e-024
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -3 / -1
Query: 434 AGNLKVAVAVLVSWSIFRNPISAMNAIGCGITLVGCTFYGYVRHLISQRQA 282
AGNLKVAVAVLVSW IFRNPISAMNA+GC +TLVGCTFYGYVRHLISQ QA
Sbjct: 658 AGNLKVAVAVLVSWMIFRNPISAMNAVGCAVTLVGCTFYGYVRHLISQHQA 506
>gb|CB927535.1|CB927535 ABA1_26_H06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_26_H06_A012 5', mRNA sequence
Length = 624
Score = 112 bits (240), Expect = 9e-024
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = -3 / +2
Query: 1190 TLRAVLAILQWWGFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSS 1053
T+RAVLAILQWWGFNVTVII+NKWIFQKL+FKFPLTVSCVHFICSS
Sbjct: 485 TIRAVLAILQWWGFNVTVIIINKWIFQKLEFKFPLTVSCVHFICSS 622
Score = 104 bits (221), Expect = 4e-021
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +1 / -1
Query: 1051 MEEQMKWTQDTVRGNLKSSFWKIHLFMMMTVTLKPHHWRMASTARRV 1191
+EE MKWT DTVRGNL SSFWKIHL MMMTVTL PHHWRMASTAR V
Sbjct: 624 IEEHMKWTHDTVRGNLNSSFWKIHLLMMMTVTLNPHHWRMASTARMV 484
>gb|CW142191.1|CW142191 104_533_11136722_148_34941_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136722, DNA
sequence
Length = 712
Score = 103 bits (219), Expect = 7e-021
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = +1 / +2
Query: 1099 KSSFWKIHLFMMMTVTLKPHHWRMASTARRVPRPAGALPPSSISTKTSVLYSCARWRRW 1275
K WKIHLFMMMTVTLKPHHWRMASTARRVPR AGALPPSSIS+ S + RRW
Sbjct: 218 KEETWKIHLFMMMTVTLKPHHWRMASTARRVPRLAGALPPSSISSFHS*CIVDEKKRRW 394
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,693,218,861
Number of Sequences: 832831
Number of extensions: 27557250
Number of successful extensions: 161345
Number of sequences better than 1.0e-020: 23
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 43227619380
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)