TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192481.2.2
(1053 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM330523.1|BM330523 PIC1_53_B04.g1_A002 Pathogen-infecte... 269 7e-071
gb|CN130792.1|CN130792 RHOH1_43_G08.g1_A002 Acid- and alkal... 130 3e-050
gb|CN130047.1|CN130047 RHOH1_39_A09.b1_A002 Acid- and alkal... 130 4e-050
gb|CN130716.1|CN130716 RHOH1_43_G08.b1_A002 Acid- and alkal... 130 1e-048
gb|CN130219.1|CN130219 RHOH1_40_B11.b1_A002 Acid- and alkal... 141 2e-048
gb|CF429294.1|CF429294 PH1_21_H01.b1_A002 Phosphorous-defic... 141 3e-047
gb|CN133296.1|CN133296 OX1_11_G10.b1_A002 Oxidatively-stres... 141 2e-046
gb|BG047905.1|BG047905 OV1_25_C04.g1_A002 Ovary 1 (OV1) Sor... 130 2e-046
gb|CN133376.1|CN133376 OX1_11_G10.g1_A002 Oxidatively-stres... 110 2e-044
gb|AW283451.2|AW283451 LG1_272_D11.g1_A002 Light Grown 1 (L... 130 4e-044
gb|CF761429.1|CF761429 DSAF1_75_A09.b1_A011 Drought-stresse... 104 6e-041
gb|CD462067.1|CD462067 SA1_36_C09.g1_A002 Salicylic acid-tr... 141 2e-039
gb|BE594824.1|BE594824 PI1_45_H08.g1_A002 Pathogen induced ... 130 2e-039
gb|CN143319.1|CN143319 WOUND1_15_B10.g1_A002 Wounded leaves... 94 2e-039
gb|CN139626.1|CN139626 OX1_23_D12.b1_A002 Oxidatively-stres... 141 2e-039
gb|CF489054.1|CF489054 POL1_54_C11.b1_A002 Pollen Sorghum b... 140 4e-039
gb|CN129627.1|CN129627 RHOH1_36_B01.g1_A002 Acid- and alkal... 98 8e-039
gb|AW680813.1|AW680813 WS1_7_G03.b1_A002 Water-stressed 1 (... 110 3e-037
gb|BM325815.1|BM325815 PIC1_53_B04.b1_A002 Pathogen-infecte... 157 3e-037
gb|CD427810.1|CD427810 ETH1_34_D09.g1_A002 Ethylene-treated... 84 6e-036
gb|BE595024.1|BE595024 PI1_48_G07.g1_A002 Pathogen induced ... 130 2e-033
gb|BE595333.1|BE595333 PI1_48_G07.b1_A002 Pathogen induced ... 130 2e-033
gb|AW677902.1|AW677902 WS1_11_B03.g1_A002 Water-stressed 1 ... 141 1e-032
gb|BG464406.1|BG464406 EM1_69_D03.g1_A002 Embryo 1 (EM1) So... 141 1e-032
gb|BG557625.1|BG557625 EM1_54_B11.g1_A002 Embryo 1 (EM1) So... 141 1e-032
gb|CF481150.1|CF481150 POL1_70_F10.b1_A002 Pollen Sorghum b... 141 1e-032
gb|CF772096.1|CF772096 DSBF1_29_B05.g9_A010 Drought-stresse... 141 1e-032
gb|CN143248.1|CN143248 WOUND1_15_B10.b1_A002 Wounded leaves... 141 1e-032
gb|AW678421.1|AW678421 WS1_15_E10.g1_A002 Water-stressed 1 ... 141 2e-032
gb|BE363656.1|BE363656 WS1_64_G03.g1_A002 Water-stressed 1 ... 141 2e-032
gb|CF486549.1|CF486549 POL1_38_H02.b1_A002 Pollen Sorghum b... 140 3e-032
gb|CF430843.1|CF430843 NIT1_1_B05.b1_A002 Nitrogen-deficien... 138 1e-031
gb|CN133291.1|CN133291 OX1_11_G05.b1_A002 Oxidatively-stres... 138 1e-031
gb|CW495753.1|CW495753 fsbb001f287k16k0 Sorghum methylation... 62 9e-031
gb|CW236913.1|CW236913 104_693_11215874_148_37518_013 Sorgh... 68 1e-027
gb|CL148399.1|CL148399 104_328_10593060_116_31783_184 Sorgh... 63 3e-026
gb|AW677812.1|AW677812 WS1_11_B03.b1_A002 Water-stressed 1 ... 66 1e-024
gb|BE595124.1|BE595124 PI1_45_H08.b1_A002 Pathogen induced ... 62 2e-024
gb|AW563879.1|AW563879 LG1_272_D11.b1_A002 Light Grown 1 (L... 62 4e-024
gb|AW924644.1|AW924644 WS1_71_G10.b1_A002 Water-stressed 1 ... 104 2e-021
gb|AW924736.1|AW924736 WS1_71_G10.g1_A002 Water-stressed 1 ... 104 2e-021
gb|BE363835.1|BE363835 WS1_71_G10.g2_A002 Water-stressed 1 ... 104 2e-021
gb|CL148400.1|CL148400 104_328_10593060_148_31782_184 Sorgh... 68 4e-021
>gb|BM330523.1|BM330523 PIC1_53_B04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 543
Score = 269 bits (581), Expect = 7e-071
Identities = 104/139 (74%), Positives = 122/139 (87%)
Frame = -2 / +2
Query: 626 KAAEDAKPLFAALKKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEV 447
KAA+D KPLFAALKKEGKS+AVGGYCWGGK E+ KT+D+K VCLSHP +VTA+DMKE+
Sbjct: 2 KAAKDTKPLFAALKKEGKSIAVGGYCWGGKFGAEIAKTNDIKVVCLSHPSTVTAEDMKEI 181
Query: 446 KWPIEILGAQNDTTTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVK 267
K PIEILGAQNDT+TPPK VY+FV LR+R+E+PY+AKIF GV HGFACRYNTTDP AV+
Sbjct: 182 KCPIEILGAQNDTSTPPKLVYQFVSALRQRNEIPYFAKIFPGVAHGFACRYNTTDPLAVR 361
Query: 266 TAETALAYMVNWFNKHLN* 210
TAE ALAYM++WF K+L *
Sbjct: 362 TAEEALAYMLDWFKKYLK* 418
Score = 203 bits (437), Expect = 5e-051
Identities = 98/140 (70%), Positives = 105/140 (75%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ + LNQ +M*ARA SAVLTAKGSVVLYLQANPC+TP KILA G S L R TN Y
Sbjct: 420 LHFKYFLNQSSM*ARASSAVLTAKGSVVLYLQANPCATPGKILAKYGISFL*RKALTNWY 241
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
TSFGGV VSF APRISIGH SF+SSAVT+ G ER T SLVF S +FPPQQ*PPTA
Sbjct: 240 TSFGGVDVSF*APRISIGHLISFISSAVTVDG*ERQTTFISLVFAISAPNFPPQQ*PPTA 61
Query: 568 TDFPSFFKAANSGLASSAAF 627
FPSFFKAA SGL S AAF
Sbjct: 60 MLFPSFFKAAKSGLVSLAAF 1
Score = 126 bits (269), Expect = 7e-028
Identities = 53/139 (38%), Positives = 85/139 (61%)
Frame = +3 / -3
Query: 210 SVEVLVEPVDHVGEGRLCGLDGERVGGVVPAGEPVLDSLEDLGVVGNLVSFTQHMHEPVH 389
S+++ +EP+ HV + G DG+ + G++ A + + +S +DLG V NL+S TQ H+ VH
Sbjct: 418 SLQIFLEPIKHVSKSFFSGSDGQGISGIISASKSMCNSRKDLGEVWNLISLTQSTHKLVH 239
Query: 390 FFRRRGRVVLGPQDLDRPFHLFHVVGSDAVRVRKAHSFDVAGLPHLHAQLPSPAVASHRD 569
F GRV+L +DL+ F LFH+ +RKA+ F + +L + +PA+ ++ +
Sbjct: 238 *FWWCGRVILSTKDLNWAFDLFHIFSRHC*WMRKANYFYIVSFCYLGTKFSTPAITANSN 59
Query: 570 GLPFLLQSGEQWLSVFRSF 626
L FLLQS ++WL VF SF
Sbjct: 58 ALSFLLQSSKEWLGVFGSF 2
>gb|CN130792.1|CN130792 RHOH1_43_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_G08_A002 5', mRNA sequence
Length = 831
Score = 130 bits (279), Expect(3) = 3e-050
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +1
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 388 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 567
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 568 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 747
Score = 61.6 bits (128), Expect(3) = 3e-050
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -2 / +1
Query: 842 GGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
GGL+ +FG+EAP LR+IAD VA +GY VVVPDFL GD D
Sbjct: 106 GGLKAYVAGLAEAKAAVILVSDIFGFEAPKLRKIADNVALSGYLVVVPDFLHGDPFD 276
Score = 61.1 bits (127), Expect(3) = 2e-021
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1 / -2
Query: 373 CTNRYTSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ 552
C+N + GG +S AP I +GH S MSS V+ GC A S F +ST +F PQQ
Sbjct: 584 CSNSSNNSGGDALSISAPSIEMGHLISLMSSTVSKDGCNNTAAWIS*TFASSTTTFAPQQ 405
Query: 553 *P 558
*P
Sbjct: 404 *P 399
Score = 50.1 bits (103), Expect(3) = 2e-021
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1 / -2
Query: 217 RCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKIL 336
R LLNQ M RA +A+LTA S LYL A+PC+TP KIL
Sbjct: 740 RYLLNQWVMSCRASAALLTAATSSSLYLTAHPCATPGKIL 621
Score = 46.9 bits (96), Expect(3) = 3e-050
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +1
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 304 WLQAHSPKKAFEEAKPVIAALKEKGVAI 387
Score = 35.4 bits (71), Expect(3) = 2e-021
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 681 VSLQEIGHDDEVPCLGDLVCYLSEQWRLVP 770
+ +QEI H ++V +++CYL + WRL P
Sbjct: 267 IPMQEIWHYNQVT*QSNIICYLPQLWRLKP 178
>gb|CN130047.1|CN130047 RHOH1_39_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_39_A09_A002 3', mRNA sequence
Length = 842
Score = 130 bits (279), Expect(3) = 4e-050
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +1
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 391 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEVDKASPPEL 570
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 571 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 750
Score = 61.6 bits (128), Expect(3) = 4e-050
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -2 / +1
Query: 842 GGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
GGL+ +FG+EAP LR+IAD VA +GY VVVPDFL GD D
Sbjct: 109 GGLKAYVAGLAEAKAAVILVSDIFGFEAPKLRKIADNVALSGYLVVVPDFLHGDPFD 279
Score = 60.2 bits (125), Expect(3) = 3e-021
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1 / -1
Query: 373 CTNRYTSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ 552
C+N + GG +S AP I +GH S MSS V+ GC A S F +ST +F PQQ
Sbjct: 587 CSNSSNNSGGDALSTSAPSIEMGHLISLMSSTVSKDGCNNTAAWIS*TFASSTTTFAPQQ 408
Query: 553 *P 558
*P
Sbjct: 407 *P 402
Score = 50.1 bits (103), Expect(3) = 3e-021
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1 / -1
Query: 217 RCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKIL 336
R LLNQ M RA +A+LTA S LYL A+PC+TP KIL
Sbjct: 743 RYLLNQWVMSCRASAALLTAATSSSLYLTAHPCATPGKIL 624
Score = 46.4 bits (95), Expect(3) = 4e-050
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +1
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 307 WLQAHSPRKAFEEAKPVIAALKEKGVAI 390
Score = 35.4 bits (71), Expect(3) = 3e-021
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3 / -3
Query: 681 VSLQEIGHDDEVPCLGDLVCYLSEQWRLVP 770
+ +QEI H ++V +++CYL + WRL P
Sbjct: 270 IPMQEIWHYNQVT*QSNIICYLPQLWRLKP 181
>gb|CN130716.1|CN130716 RHOH1_43_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_43_G08_A002 3', mRNA sequence
Length = 775
Score = 130 bits (279), Expect(3) = 1e-048
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 212 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 391
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 392 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 571
Score = 61.1 bits (127), Expect(3) = 1e-021
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1 / -2
Query: 373 CTNRYTSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ 552
C+N + GG +S AP I +GH S MSS V+ GC A S F +ST +F PQQ
Sbjct: 408 CSNSSNNSGGDALSISAPSIEMGHLISLMSSTVSKDGCNNTAAWIS*TFASSTTTFAPQQ 229
Query: 553 *P 558
*P
Sbjct: 228 *P 223
Score = 56.1 bits (116), Expect(3) = 1e-048
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 770 GYEAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
G+EAP LR+IAD VA +GY VVVPDFL GD D
Sbjct: 2 GFEAPKLRKIADNVALSGYLVVVPDFLHGDPFD 100
Score = 50.1 bits (103), Expect(3) = 1e-021
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1 / -2
Query: 217 RCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKIL 336
R LLNQ M RA +A+LTA S LYL A+PC+TP KIL
Sbjct: 564 RYLLNQWVMSCRASAALLTAATSSSLYLTAHPCATPGKIL 445
Score = 46.9 bits (96), Expect(3) = 1e-048
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 128 WLQAHSPKKAFEEAKPVIAALKEKGVAI 211
Score = 35.4 bits (71), Expect(3) = 1e-021
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 681 VSLQEIGHDDEVPCLGDLVCYLSEQWRLVP 770
+ +QEI H ++V +++CYL + WRL P
Sbjct: 91 IPMQEIWHYNQVT*QSNIICYLPQLWRLKP 2
>gb|CN130219.1|CN130219 RHOH1_40_B11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_B11_A002 3', mRNA sequence
Length = 746
Score = 141 bits (303), Expect(3) = 2e-048
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 173 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 352
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 353 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 532
Query: 227 NKHLN* 210
NK+L *
Sbjct: 533 NKNLK* 550
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 552 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 373
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 372 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 193
Query: 568 T 570
T
Sbjct: 192 T 190
Score = 46.4 bits (95), Expect(3) = 2e-048
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 749 RQIADKVAKAGYFVVVPDFLKGD 681
R+IADKVA +GYFVVVPDF GD
Sbjct: 2 RKIADKVASSGYFVVVPDFFHGD 70
Score = 45.1 bits (92), Expect(3) = 2e-048
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -2 / +2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K +EWL++H+P K E+AKP+ A LK++G S
Sbjct: 83 ENGKPILEWLKSHTPEKGFEEAKPVIATLKEKGVS 187
>gb|CF429294.1|CF429294 PH1_21_H01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_21_H01_A002 3', mRNA sequence
Length = 725
Score = 141 bits (302), Expect(3) = 3e-047
Identities = 60/121 (49%), Positives = 80/121 (66%)
Frame = -2 / +2
Query: 572 SVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPK 393
+V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+
Sbjct: 188 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDKMSPPE 367
Query: 392 EVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN 213
V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WFNK+L
Sbjct: 368 LVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK 547
Query: 212 * 210
*
Sbjct: 548 * 550
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 552 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 373
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 372 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 193
Query: 568 T 570
T
Sbjct: 192 T 190
Score = 45.1 bits (92), Expect(3) = 3e-047
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK+EG S
Sbjct: 83 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEEGVS 187
Score = 42.8 bits (87), Expect(3) = 3e-047
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 749 RQIADKVAKAGYFVVVPDFLKGD 681
R+IADKVA +GYFVVVPD GD
Sbjct: 2 RKIADKVASSGYFVVVPDSFHGD 70
>gb|CN133296.1|CN133296 OX1_11_G10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_G10_A002 3', mRNA sequence
Length = 767
Score = 141 bits (303), Expect(3) = 2e-046
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 163 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 342
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 343 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 522
Query: 227 NKHLN* 210
NK+L *
Sbjct: 523 NKNLK* 540
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 542 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 363
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 362 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 183
Query: 568 T 570
T
Sbjct: 182 T 180
Score = 43.2 bits (88), Expect(3) = 2e-046
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 73 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 177
Score = 41.8 bits (85), Expect(3) = 2e-046
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 740 ADKVAKAGYFVVVPDFLKGD 681
ADKVA +GYFVVVPDF GD
Sbjct: 1 ADKVASSGYFVVVPDFFHGD 60
>gb|BG047905.1|BG047905 OV1_25_C04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 130 bits (279), Expect(3) = 2e-046
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 206 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 385
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 386 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 565
Score = 48.7 bits (100), Expect(3) = 2e-046
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / +2
Query: 764 EAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
EAP LR+IAD VA +GY VVVPD L GD D
Sbjct: 2 EAPKLRKIADNVALSGYLVVVPDXLHGDPFD 94
Score = 46.9 bits (96), Expect(3) = 2e-046
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 122 WLQAHSPKKAFEEAKPVIAALKEKGVAI 205
>gb|CN133376.1|CN133376 OX1_11_G10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_G10_A002 5', mRNA sequence
Length = 714
Score = 110 bits (235), Expect(3) = 2e-044
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 418 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 597
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYN 291
+PP+ V +F VL V ++ KIF GV HG++ RY+
Sbjct: 598 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYS 714
Score = 65.7 bits (137), Expect(3) = 2e-044
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -2 / +1
Query: 857 VHDLPGGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
V D GGL+ VFG+EAP+LR+IADKVA +GYFVVVPDF GD
Sbjct: 139 VVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPILRKIADKVASSGYFVVVPDFFHGD 315
Score = 43.2 bits (88), Expect(3) = 2e-044
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 328 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 432
>gb|AW283451.2|AW283451 LG1_272_D11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 130 bits (279), Expect(3) = 4e-044
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +1
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 184 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 363
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 364 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 543
Score = 46.9 bits (96), Expect(3) = 4e-044
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +1
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 100 WLQAHSPKKAFEEAKPVIAALKEKGVAI 183
Score = 40.9 bits (83), Expect(3) = 4e-044
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 743 IADKVAKAGYFVVVPDFLKGDYLD 672
IAD VA +GY VVVPDFL GD D
Sbjct: 1 IADNVALSGYLVVVPDFLHGDPFD 72
>gb|CF761429.1|CF761429 DSAF1_75_A09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_75_A09_A011 5', mRNA sequence
Length = 474
Score = 104 bits (221), Expect(3) = 6e-041
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = -2 / +3
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 195 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 374
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHG 309
+PP+ V +F VL V ++ KIF GV HG
Sbjct: 375 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHG 473
Score = 60.6 bits (126), Expect(3) = 6e-041
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2 / +3
Query: 770 GYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
G+EAP+LR+IADKVA +GYFVVVPDF GD
Sbjct: 3 GFEAPILRKIADKVASSGYFVVVPDFFHGD 92
Score = 43.2 bits (88), Expect(3) = 6e-041
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +3
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 105 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 209
>gb|CD462067.1|CD462067 SA1_36_C09.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_36_C09_A002 5', mRNA sequence
Length = 722
Score = 141 bits (303), Expect(2) = 2e-039
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / -2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 598 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 419
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 418 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 239
Query: 227 NKHLN* 210
NK+L *
Sbjct: 238 NKNLK* 221
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / +3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 219 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 398
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 399 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 578
Query: 568 T 570
T
Sbjct: 579 T 581
Score = 43.2 bits (88), Expect(2) = 2e-039
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / -2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 688 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 584
>gb|BE594824.1|BE594824 PI1_45_H08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 735
Score = 130 bits (279), Expect(3) = 2e-039
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 155 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 334
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 335 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 514
Score = 46.9 bits (96), Expect(3) = 2e-039
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 71 WLQAHSPKKAFEEAKPVIAALKEKGVAI 154
Score = 25.4 bits (49), Expect(3) = 2e-039
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 710 VVVPDFLKGDYLD 672
VVVPDFL GD D
Sbjct: 5 VVVPDFLHGDPFD 43
>gb|CN143319.1|CN143319 WOUND1_15_B10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_15_B10_A002 5', mRNA sequence
Length = 700
Score = 94.1 bits (199), Expect(3) = 2e-039
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 439 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 618
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIF 327
+PP+ V +F VL V ++ KIF
Sbjct: 619 MSPPELVKQFEQVLSVNSGVGHFVKIF 699
Score = 65.7 bits (137), Expect(3) = 2e-039
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -2 / +1
Query: 857 VHDLPGGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
V D GGL+ VFG+EAP+LR+IADKVA +GYFVVVPDF GD
Sbjct: 160 VVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPILRKIADKVASSGYFVVVPDFFHGD 336
Score = 43.2 bits (88), Expect(3) = 2e-039
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 349 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 453
>gb|CN139626.1|CN139626 OX1_23_D12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_23_D12_A002 3', mRNA sequence
Length = 728
Score = 141 bits (303), Expect(2) = 2e-039
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 89 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 268
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 269 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 448
Query: 227 NKHLN* 210
NK+L *
Sbjct: 449 NKNLK* 466
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 468 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 289
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 288 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 109
Query: 568 T 570
T
Sbjct: 108 T 106
Score = 42.8 bits (87), Expect(2) = 2e-039
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -2 / +2
Query: 665 KNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 8 KPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 103
>gb|CF489054.1|CF489054 POL1_54_C11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_C11_A002 3', mRNA sequence
Length = 689
Score = 140 bits (300), Expect(2) = 4e-039
Identities = 61/126 (48%), Positives = 81/126 (64%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 92 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 271
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 272 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 451
Query: 227 NKHLN* 210
NK L *
Sbjct: 452 NKTLK* 469
Score = 114 bits (243), Expect = 3e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 471 VHFRVLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 292
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 291 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 112
Query: 568 T 570
T
Sbjct: 111 T 109
Score = 43.2 bits (88), Expect(2) = 4e-039
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 2 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 106
>gb|CN129627.1|CN129627 RHOH1_36_B01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_B01_A002 5', mRNA sequence
Length = 656
Score = 97.7 bits (207), Expect(3) = 8e-039
Identities = 39/93 (41%), Positives = 58/93 (62%)
Frame = -2 / +2
Query: 596 AALKKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQ 417
A +K + GYCWG K+ VE+ K +++A L HP +T DD+KEVK PI ILGA+
Sbjct: 374 AIKEKGVSRIGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTDDDIKEVKCPISILGAE 553
Query: 416 NDTTTPPKEVYRFVHVLRERHEVPYYAKIFQGV 318
D ++PP+ + +F +L E+ ++ KIF GV
Sbjct: 554 IDRSSPPELLKQFGQILSANSEIDHFVKIFPGV 652
Score = 65.2 bits (136), Expect(3) = 8e-039
Identities = 31/68 (45%), Positives = 36/68 (52%)
Frame = -2 / +2
Query: 875 AEAGEVVHDLPGGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPD 696
A G V D GG + FG+EAP LR+IAD+VA +GYFVVVPD
Sbjct: 89 ASGGGEVVDDFGGQKAYITGSAGSKAAVVLISDAFGFEAPNLRKIADQVASSGYFVVVPD 268
Query: 695 FLKGDYLD 672
FL GD D
Sbjct: 269 FLHGDPYD 292
Score = 37.7 bits (76), Expect(3) = 8e-039
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKS 570
W++AH+P ++AKP+ AA+K++G S
Sbjct: 317 WIQAHNPQNTFKEAKPVIAAIKEKGVS 397
>gb|AW680813.1|AW680813 WS1_7_G03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 110 bits (235), Expect(3) = 3e-037
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 172 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 351
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYN 291
+PP+ V +F VL V ++ KIF GV HG++ RY+
Sbjct: 352 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYS 468
Score = 43.2 bits (88), Expect(3) = 3e-037
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 82 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 186
Score = 41.8 bits (85), Expect(3) = 3e-037
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 740 ADKVAKAGYFVVVPDFLKGD 681
ADKVA +GYFVVVPDF GD
Sbjct: 10 ADKVASSGYFVVVPDFFHGD 69
>gb|BM325815.1|BM325815 PIC1_53_B04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 474
Score = 157 bits (337), Expect = 3e-037
Identities = 66/108 (61%), Positives = 75/108 (69%)
Frame = -2 / +2
Query: 872 EAGEVVHDLPGGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDF 693
E+G VV DLPGG + VFG+EAP+LR IADKVA+AGYFVVVPDF
Sbjct: 149 ESGVVVGDLPGGFKAYVTGPSESSRAVVLASDVFGFEAPILRTIADKVAEAGYFVVVPDF 328
Query: 692 LKGDYLDDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKSVAVGGYC 549
GD D KN W++ HSPVKAA+D KPLFAALKKEGKS+AVGGYC
Sbjct: 329 FNGDPYDTSKNITVWIKFHSPVKAAKDTKPLFAALKKEGKSIAVGGYC 472
>gb|CD427810.1|CD427810 ETH1_34_D09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_D09_A002 5', mRNA sequence
Length = 535
Score = 84.5 bits (178), Expect(3) = 6e-036
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 326 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 505
Query: 407 TTPPKEVYRF 378
+PP+ V +F
Sbjct: 506 MSPPELVQQF 535
Score = 63.4 bits (132), Expect(3) = 6e-036
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -2 / +2
Query: 773 FGYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
FG+EAP+LR+IADKVA +GYFVVVPDF GD
Sbjct: 131 FGFEAPILRKIADKVASSGYFVVVPDFFHGD 223
Score = 43.2 bits (88), Expect(3) = 6e-036
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 236 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 340
>gb|BE595024.1|BE595024 PI1_48_G07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 633
Score = 130 bits (279), Expect(2) = 2e-033
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 80 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 259
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 260 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 439
Score = 33.6 bits (67), Expect(2) = 2e-033
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 635 SPVKAAEDAKPLFAALKKEGKSV 567
SP KA E+AKP+ AALK++G ++
Sbjct: 11 SPKKAFEEAKPVIAALKEKGVAI 79
>gb|BE595333.1|BE595333 PI1_48_G07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 518
Score = 130 bits (279), Expect(2) = 2e-033
Identities = 53/120 (44%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 390
+ GYCWG K+ VE+ K +++A L HP +T DD+KE+K PI ILGA+ D +PP+
Sbjct: 80 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLTVDDIKEIKCPISILGAEIDKASPPEL 259
Query: 389 VYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
+ F +L + + KIF GV HG+A RY+ D AV +A AL M +WFNK+L *
Sbjct: 260 LEEFEQILSANSGIEHSVKIFPGVAHGWAVRYSDDDVAAVSSAAEALHDMTHWFNKYLK* 439
Score = 33.6 bits (67), Expect(2) = 2e-033
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -2 / +2
Query: 635 SPVKAAEDAKPLFAALKKEGKSV 567
SP KA E+AKP+ AALK++G ++
Sbjct: 11 SPKKAFEEAKPVIAALKEKGVAI 79
>gb|AW677902.1|AW677902 WS1_11_B03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 603
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 28 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 207
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 208 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 387
Query: 227 NKHLN* 210
NK+L *
Sbjct: 388 NKNLK* 405
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -2
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 407 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 228
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 227 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 48
Query: 568 T 570
T
Sbjct: 47 T 45
>gb|BG464406.1|BG464406 EM1_69_D03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 609
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +3
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 21 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 200
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 201 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 380
Query: 227 NKHLN* 210
NK+L *
Sbjct: 381 NKNLK* 398
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 400 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 221
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 220 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 41
Query: 568 T 570
T
Sbjct: 40 T 38
>gb|BG557625.1|BG557625 EM1_54_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 614
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +1
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 25 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 204
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 205 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 384
Query: 227 NKHLN* 210
NK+L *
Sbjct: 385 NKNLK* 402
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 404 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 225
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 224 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 45
Query: 568 T 570
T
Sbjct: 44 T 42
>gb|CF481150.1|CF481150 POL1_70_F10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_F10_A002 3', mRNA sequence
Length = 549
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +3
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 3 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 182
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 183 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 362
Query: 227 NKHLN* 210
NK+L *
Sbjct: 363 NKNLK* 380
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 382 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 203
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 202 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 23
Query: 568 T 570
T
Sbjct: 22 T 20
>gb|CF772096.1|CF772096 DSBF1_29_B05.g9_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_29_B05_A010 3', mRNA sequence
Length = 607
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +3
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 54 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 233
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 234 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 413
Query: 227 NKHLN* 210
NK+L *
Sbjct: 414 NKNLK* 431
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 433 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 254
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 253 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 74
Query: 568 T 570
T
Sbjct: 73 T 71
>gb|CN143248.1|CN143248 WOUND1_15_B10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_15_B10_A002 3', mRNA sequence
Length = 641
Score = 141 bits (303), Expect = 1e-032
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDT 408
+K +V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D
Sbjct: 44 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDK 223
Query: 407 TTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWF 228
+PP+ V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WF
Sbjct: 224 MSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWF 403
Query: 227 NKHLN* 210
NK+L *
Sbjct: 404 NKNLK* 421
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -3
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 423 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 244
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 243 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 64
Query: 568 T 570
T
Sbjct: 63 T 61
>gb|AW678421.1|AW678421 WS1_15_E10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 535
Score = 141 bits (302), Expect = 2e-032
Identities = 60/121 (49%), Positives = 80/121 (66%)
Frame = -2 / +3
Query: 572 SVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPK 393
+V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+
Sbjct: 6 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDKMSPPE 185
Query: 392 EVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN 213
V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WFNK+L
Sbjct: 186 LVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK 365
Query: 212 * 210
*
Sbjct: 366 * 368
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 370 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 191
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 190 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 11
Query: 568 T 570
T
Sbjct: 10 T 8
>gb|BE363656.1|BE363656 WS1_64_G03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 409
Score = 141 bits (302), Expect = 2e-032
Identities = 60/121 (49%), Positives = 80/121 (66%)
Frame = -2 / +3
Query: 572 SVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPK 393
+V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+
Sbjct: 3 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDKMSPPE 182
Query: 392 EVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN 213
V +F VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WFNK+L
Sbjct: 183 LVKQFEQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK 362
Query: 212 * 210
*
Sbjct: 363 * 365
Score = 113 bits (242), Expect = 4e-024
Identities = 57/121 (47%), Positives = 70/121 (57%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 367 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 188
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 187 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAP 8
Query: 568 T 570
T
Sbjct: 7 T 5
>gb|CF486549.1|CF486549 POL1_38_H02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_H02_A002 3', mRNA sequence
Length = 621
Score = 140 bits (301), Expect = 3e-032
Identities = 59/121 (48%), Positives = 80/121 (66%)
Frame = -2 / +1
Query: 572 SVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPK 393
+V GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+
Sbjct: 1 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEVDKMSPPE 180
Query: 392 EVYRFVHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN 213
V +F VL V ++ K+F GV HG++ RY+ D AVK+AE A A M++WFNK+L
Sbjct: 181 LVKQFEQVLSVNSGVGHFVKVFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK 360
Query: 212 * 210
*
Sbjct: 361 * 363
Score = 111 bits (237), Expect = 2e-023
Identities = 56/121 (46%), Positives = 69/121 (57%)
Frame = +1 / -2
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP K L * T + TC+N
Sbjct: 365 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKTLTK*PTPEFTERTCSNCL 186
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*PPTA 567
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 185 TNSGGDILSTSAPSIEIGHLTSLISSMVTKEGCNSTAAWISWAFANSTTTFAPQQYPAAP 6
Query: 568 T 570
T
Sbjct: 5 T 3
>gb|CF430843.1|CF430843 NIT1_1_B05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_1_B05_A002 3', mRNA sequence
Length = 612
Score = 138 bits (297), Expect = 1e-031
Identities = 59/116 (50%), Positives = 78/116 (67%)
Frame = -2 / +1
Query: 557 GYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRF 378
GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+ V +F
Sbjct: 7 GYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDKMSPPELVKQF 186
Query: 377 VHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WFNK+L *
Sbjct: 187 EQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK* 354
Score = 112 bits (239), Expect = 1e-023
Identities = 56/117 (47%), Positives = 69/117 (58%)
Frame = +1 / -2
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 356 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 177
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*P 558
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 176 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYP 6
>gb|CN133291.1|CN133291 OX1_11_G05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_G05_A002 3', mRNA sequence
Length = 647
Score = 138 bits (297), Expect = 1e-031
Identities = 59/116 (50%), Positives = 78/116 (67%)
Frame = -2 / +1
Query: 557 GYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRF 378
GYCWG K+ VE+ K +++A L HP VT DD+KEVK PI ILGA+ D +PP+ V +F
Sbjct: 7 GYCWGAKVVVELAKAHEIQAAVLLHPSFVTIDDIKEVKCPISILGAEIDKMSPPELVKQF 186
Query: 377 VHVLRERHEVPYYAKIFQGVEHGFACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
VL V ++ KIF GV HG++ RY+ D AVK+AE A A M++WFNK+L *
Sbjct: 187 EQVLSVNSGVGHFVKIFPGVAHGWSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK* 354
Score = 112 bits (239), Expect = 1e-023
Identities = 56/117 (47%), Positives = 69/117 (58%)
Frame = +1 / -1
Query: 208 IQLRCLLNQLTM*ARAVSAVLTAKGSVVLYLQANPCSTPWKILA**GTSCLSRSTCTNRY 387
+ R LLNQ +M A+A SA+ TA S LYL +PC+TP KIL * T + TC+N
Sbjct: 356 VHFRFLLNQSSMSAKASSALFTAAASSWLYLTLHPCATPGKILTK*PTPEFTERTCSNCL 177
Query: 388 TSFGGVVVSFWAPRISIGHFTSFMSSAVTLYGCERHTALTSLVFPTSTLSFPPQQ*P 558
T+ GG ++S AP I IGH TS +SS VT GC A S F ST +F PQQ P
Sbjct: 176 TNSGGDILSISAPSIEIGHLTSLISSMVTKEGCNSTAAWIS*AFANSTTTFAPQQYP 6
>gb|CW495753.1|CW495753 fsbb001f287k16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f287k16, DNA
sequence
Length = 717
Score = 62.0 bits (129), Expect(4) = 9e-031
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 740 ADKVAKAGYFVVVPDFLKGDYLDDKKNFMEWLEAHSPV 627
+DKV GY+VVVPDF GD +D KN EW+++HSPV
Sbjct: 715 SDKVGMIGYYVVVPDFFNGDPYNDSKNLSEWIKSHSPV 602
Score = 61.1 bits (127), Expect(4) = 9e-031
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2 / -1
Query: 629 VKAAEDAKPLFAALKKEGKSVAVGGYCWGGK 537
V AA+DAKPLF L++EGKSV VGGYCWGG+
Sbjct: 468 VTAAQDAKPLFDYLRQEGKSVRVGGYCWGGE 376
Score = 42.8 bits (87), Expect(4) = 9e-031
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 542 GKLSVEVGKTSDVKAVCLSHPYSVTADDMKEV 447
GK + E+ KT +++ LSHP +VT DDMK V
Sbjct: 261 GKFATEMAKTDNIEVAVLSHPANVTVDDMKGV 166
Score = 29.9 bits (59), Expect(4) = 9e-031
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / -3
Query: 452 EVKWPIEILGA 420
EVKWPIEILGA
Sbjct: 34 EVKWPIEILGA 2
>gb|CW236913.1|CW236913 104_693_11215874_148_37518_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215874, DNA
sequence
Length = 727
Score = 68.0 bits (142), Expect(3) = 1e-027
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2 / -3
Query: 749 RQIADKVAKAGYFVVVPDFLKGDYLDDKKNFMEWLEAHSPV 627
R+IADKV GY+VVVPDF GD +D KN EW+++HSPV
Sbjct: 656 RKIADKVGMIGYYVVVPDFFNGDPYNDSKNLSEWIKSHSPV 534
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 629 VKAAEDAKPLFAALKKEGKSVAVGGYCWGGK 537
V AA+DAKPLF L++E KSV VGGYCWGG+
Sbjct: 400 VTAAQDAKPLFDYLRQERKSVGVGGYCWGGE 308
Score = 41.4 bits (84), Expect(3) = 1e-027
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 542 GKLSVEVGKTSDVKAVCLSHPYSVTADDMKEV 447
GK + E+ KT +++ LSHP VT DDMK V
Sbjct: 194 GKFATEMAKTDNIEVAVLSHPAYVTVDDMKGV 99
>gb|CL148399.1|CL148399 104_328_10593060_116_31783_184 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593060, DNA
sequence
Length = 727
Score = 62.9 bits (131), Expect(3) = 3e-026
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -2 / -2
Query: 452 EVKWPIEILGAQNDTTTPPKEVYRFVHVLRERHE 351
EVKWPIEILGAQNDT TPP++V++F VL ER +
Sbjct: 234 EVKWPIEILGAQNDTITPPEQVHQFEQVLSERKD 133
Score = 57.9 bits (120), Expect(3) = 3e-026
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -2 / -1
Query: 629 VKAAEDAKPLFAALKKEGKSVAVGGYCWGGK 537
V AA+DAKPLF L++E KSV VGGYCWGG+
Sbjct: 667 VTAAQDAKPLFDYLRQERKSVGVGGYCWGGE 575
Score = 41.4 bits (84), Expect(3) = 3e-026
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 542 GKLSVEVGKTSDVKAVCLSHPYSVTADDMKEV 447
GK + E+ KT +++ LSHP VT DDMK V
Sbjct: 461 GKFATEMAKTDNIEVAVLSHPAYVTVDDMKGV 366
>gb|AW677812.1|AW677812 WS1_11_B03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 542
Score = 65.7 bits (137), Expect(3) = 1e-024
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -2 / +2
Query: 857 VHDLPGGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
V D GGL+ VFG+EAP+LR+IADKVA +GYFVVVPDF GD
Sbjct: 149 VVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPILRKIADKVASSGYFVVVPDFFHGD 325
Score = 43.7 bits (89), Expect(3) = 1e-024
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2 / +2
Query: 587 KKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHP 480
+K +V GYCWG K+ VE+ K +++A L HP
Sbjct: 428 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHP 535
Score = 43.2 bits (88), Expect(3) = 1e-024
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 674 DDKKNFMEWLEAHSPVKAAEDAKPLFAALKKEGKS 570
++ K EWL++H+P K E+AKP+ A LK++G S
Sbjct: 338 ENGKPIPEWLKSHTPEKGFEEAKPVIATLKEKGVS 442
>gb|BE595124.1|BE595124 PI1_45_H08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 61.6 bits (128), Expect(3) = 2e-024
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -2 / +2
Query: 842 GGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
GGL+ +FG+EAP LR+IAD VA +GY VVVPDFL GD D
Sbjct: 110 GGLKAYVAGLAEAKAAVILVSDIFGFEAPKLRKIADNVALSGYLVVVPDFLHGDPFD 280
Score = 46.9 bits (96), Expect(3) = 2e-024
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 308 WLQAHSPKKAFEEAKPVIAALKEKGVAI 391
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVT 468
+ GYCWG K+ VE+ K +++A L HP +T
Sbjct: 392 IGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLT 493
>gb|AW563879.1|AW563879 LG1_272_D11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 61.6 bits (128), Expect(3) = 4e-024
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -2 / +2
Query: 842 GGLRXXXXXXXXXXXXXXXXXXVFGYEAPLLRQIADKVAKAGYFVVVPDFLKGDYLD 672
GGL+ +FG+EAP LR+IAD VA +GY VVVPDFL GD D
Sbjct: 203 GGLKAYVAGLAEAKAAVILVSDIFGFEAPKLRKIADNVALSGYLVVVPDFLHGDPFD 373
Score = 46.9 bits (96), Expect(3) = 4e-024
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKSV 567
WL+AHSP KA E+AKP+ AALK++G ++
Sbjct: 401 WLQAHSPKKAFEEAKPVIAALKEKGVAI 484
Score = 42.3 bits (86), Expect(3) = 4e-024
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / +2
Query: 569 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHP 480
+ GYCWG K+ VE+ K +++A L HP
Sbjct: 485 IGAAGYCWGAKVVVELAKVHEIQAAVLLHP 574
>gb|AW924644.1|AW924644 WS1_71_G10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 477
Score = 104 bits (222), Expect = 2e-021
Identities = 47/93 (50%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 488 SHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHG 309
+ P VT DD+KEVK PI ILGA+ D +PP+ V +F VL V ++ KIF GV HG
Sbjct: 3 TRPSFVTIDDIKEVKCPISILGAEIDKMSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHG 182
Query: 308 FACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
++ RY+ D AVK+AE A A M++WFNK+L *
Sbjct: 183 WSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK* 281
>gb|AW924736.1|AW924736 WS1_71_G10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 455
Score = 104 bits (222), Expect = 2e-021
Identities = 47/93 (50%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 488 SHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHG 309
+ P VT DD+KEVK PI ILGA+ D +PP+ V +F VL V ++ KIF GV HG
Sbjct: 3 TRPSFVTIDDIKEVKCPISILGAEIDKMSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHG 182
Query: 308 FACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
++ RY+ D AVK+AE A A M++WFNK+L *
Sbjct: 183 WSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK* 281
>gb|BE363835.1|BE363835 WS1_71_G10.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 426
Score = 104 bits (222), Expect = 2e-021
Identities = 47/93 (50%), Positives = 62/93 (66%)
Frame = -2 / +3
Query: 488 SHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVLRERHEVPYYAKIFQGVEHG 309
+ P VT DD+KEVK PI ILGA+ D +PP+ V +F VL V ++ KIF GV HG
Sbjct: 3 TRPSFVTIDDIKEVKCPISILGAEIDKMSPPELVKQFEQVLSVNSGVGHFVKIFPGVAHG 182
Query: 308 FACRYNTTDPFAVKTAETALAYMVNWFNKHLN* 210
++ RY+ D AVK+AE A A M++WFNK+L *
Sbjct: 183 WSVRYSHDDAAAVKSAEEAFADMLDWFNKNLK* 281
>gb|CL148400.1|CL148400 104_328_10593060_148_31782_184 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593060, DNA
sequence
Length = 752
Score = 68.0 bits (142), Expect(2) = 4e-021
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2 / +1
Query: 749 RQIADKVAKAGYFVVVPDFLKGDYLDDKKNFMEWLEAHSPV 627
R+IADKV GY+VVVPDF GD +D KN EW+++HSPV
Sbjct: 373 RKIADKVGMIGYYVVVPDFFNGDPYNDSKNLSEWIKSHSPV 495
Score = 57.9 bits (120), Expect(2) = 4e-021
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -2 / +2
Query: 629 VKAAEDAKPLFAALKKEGKSVAVGGYCWGGK 537
V AA+DAKPLF L++E KSV VGGYCWGG+
Sbjct: 629 VTAAQDAKPLFDYLRQERKSVGVGGYCWGGE 721
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,060,737,430
Number of Sequences: 832831
Number of extensions: 14121887
Number of successful extensions: 136447
Number of sequences better than 1.0e-020: 45
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 34804351045
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)