TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521641.2.1
(594 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN499693.1|DN499693 T078C12.5pR Populus shoot meristem c... 192 2e-048
gb|CA932223.1|CA932223 MTU5CS.P10.B12 Aspen stem cDNA Libra... 190 7e-048
gb|CA932541.1|CA932541 MTU5CS.P14.D02 Aspen stem cDNA Libra... 188 4e-047
gb|BU825887.1|BU825887 UK114TC05 Populus apical shoot cDNA ... 182 1e-045
gb|DN489777.1|DN489777 T078C12.3pR Populus shoot meristem c... 168 2e-041
gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Po... 155 2e-037
dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta... 155 2e-037
dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta... 155 2e-037
gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Popul... 153 8e-037
gb|CX655021.1|CX655021 PO01003H07 Poplar SC cDNA library Po... 153 8e-037
gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Po... 153 8e-037
dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta... 153 8e-037
gb|CV253621.1|CV253621 WS0222.B21_I01 PTxD-ICC-A-12 Populus... 153 1e-036
gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Po... 153 1e-036
gb|CV270811.1|CV270811 WS0153.B21_A01 PTxN-IB-A-6 Populus t... 152 2e-036
gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Po... 152 2e-036
gb|CX657138.1|CX657138 PO02030F03 Poplar SC cDNA library Po... 152 2e-036
gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus t... 143 9e-034
gb|BI119713.1|BI119713 F003P95Y Populus flower cDNA library... 142 2e-033
gb|CK090420.1|CK090420 F003P95.3pR Populus flower cDNA libr... 142 2e-033
gb|CK100862.1|CK100862 F003P95.5pR Populus flower cDNA libr... 142 2e-033
gb|CN523596.1|CN523596 GQ015M07.T3_C08 GQ015 Populus tricho... 142 2e-033
gb|CV252315.1|CV252315 PX0011.B21_E13 PT-X-FL-A-1 Populus t... 142 2e-033
gb|CV256402.1|CV256402 WS0243.B21_L24 PTxD-ICC-N-A-14 Popul... 142 2e-033
gb|DT470365.1|DT470365 WS01920.C21_K15 PT-DX-N-A-10 Populus... 142 2e-033
gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Popu... 142 2e-033
gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Popul... 142 2e-033
gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Po... 106 3e-033
dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1... 138 3e-032
gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B ... 88 4e-032
gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus t... 88 4e-032
gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Popu... 88 4e-032
gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid lib... 88 4e-032
gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Popul... 88 4e-032
gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Popu... 88 4e-032
gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Po... 88 4e-032
gb|CV270845.1|CV270845 WS0153.B21_B14 PTxN-IB-A-6 Populus t... 88 4e-032
gb|BI129393.1|BI129393 G090P13Y Populus cambium cDNA librar... 88 4e-032
gb|DT508961.1|DT508961 WS02422.BR_G12 PTxD-ICC-N-A-14 Popul... 137 7e-032
gb|DT513569.1|DT513569 WS02422.B21_G12 PTxD-ICC-N-A-14 Popu... 137 7e-032
gb|CV228635.1|CV228635 WS01910.B21_M09 PT-DX-N-A-10 Populus... 88 3e-031
gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus tri... 84 5e-031
gb|DN491984.1|DN491984 V038E02.3pR Populus male catkins cDN... 133 7e-031
gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichoca... 83 1e-030
gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Libra... 132 2e-030
gb|CV264808.1|CV264808 WS02025.B21_I19 PTxN-IB-N-A-11 Popul... 88 6e-030
gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Po... 78 4e-029
gb|DT520699.1|DT520699 WS02448.B21_E15 PTxD-ICC-N-A-14 Popu... 125 2e-028
gb|CX657952.1|CX657952 PO01007D06 Poplar SC cDNA library Po... 90 8e-027
gb|DN491846.1|DN491846 V031G10.3pR Populus male catkins cDN... 70 4e-026
gb|DV464578.1|DV464578 MTUNUL1.P29.C07 NUL Populus fremonti... 83 9e-026
gb|CF119547.1|CF119547 MTU10CS.P3.C05 Aspen stem cDNA Libra... 70 5e-025
gb|CF119849.1|CF119849 MTU10CS.P7.B01 Aspen stem cDNA Libra... 70 5e-025
gb|CF119223.1|CF119223 MTU10CS.P15.B01 Aspen stem cDNA Libr... 70 2e-024
gb|CX655743.1|CX655743 PO02039D08 Poplar SC cDNA library Po... 70 4e-024
gb|CX657836.1|CX657836 PO01005H03 Poplar SC cDNA library Po... 110 7e-024
gb|CA925970.1|CA925970 MTU7TL.P8.D02 Aspen leaf cDNA Librar... 108 3e-023
gb|CV236049.1|CV236049 WS01222.B21_K05 PT-GT-FL-A-3 Populus... 72 4e-023
gb|CX655044.1|CX655044 PO01004B07 Poplar SC cDNA library Po... 90 9e-023
gb|DT475971.1|DT475971 WS0128.BR_N04 PT-GT-FL-A-3 Populus t... 73 9e-023
gb|CX657081.1|CX657081 PO02059C06 Poplar SC cDNA library Po... 67 2e-021
gb|CV262394.1|CV262394 WS02019.B21_H03 PTxN-IB-N-A-11 Popul... 88 3e-021
gb|DT514739.1|DT514739 WS02425.B21_K09 PTxD-ICC-N-A-14 Popu... 100 8e-021
>gb|DN499693.1|DN499693 T078C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T078C12 5', mRNA sequence
Length = 754
Score = 192 bits (413), Expect = 2e-048
Identities = 75/99 (75%), Positives = 87/99 (87%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP+RIHHR SSLPS+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD
Sbjct: 133 YMVGYGPRYPQRIHHRGSSLPSMAAHPAKIQCSSGFSVMKSQSPNPNILVGAIVGGPDEH 312
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLAHSYGQL*A 298
DRFPDER+D+E SEPATY+NAPLVGALAYLAHSYGQL*A
Sbjct: 313 DRFPDERSDYEQSEPATYMNAPLVGALAYLAHSYGQL*A 429
Score = 129 bits (277), Expect = 1e-029
Identities = 61/96 (63%), Positives = 65/96 (67%)
Frame = +2 / -3
Query: 305 SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAYSA 484
SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 422 SWPYE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*DFIT 243
Query: 485 VNPCEQPILAGCAATDGSDEARWWMRRGYLAP*PTM 592
+ P E I AGCAA DGSDE W + GYL P PTM
Sbjct: 242 LKPEEHWIFAGCAAIDGSDEPLW*ILCGYLGPYPTM 135
>gb|CA932223.1|CA932223 MTU5CS.P10.B12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 663
Score = 190 bits (409), Expect = 7e-048
Identities = 74/99 (74%), Positives = 87/99 (87%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP+RIHHR SSLPS+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD
Sbjct: 121 YMVGYGPRYPQRIHHRGSSLPSMAAHPAKIQCSSGFSVMKSQSPNPNILVGAIVGGPDEH 300
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLAHSYGQL*A 298
DRFPDER+D+E SEPATY+NAPLVGALAYLAHS+GQL*A
Sbjct: 301 DRFPDERSDYEQSEPATYMNAPLVGALAYLAHSFGQL*A 417
Score = 129 bits (277), Expect = 1e-029
Identities = 61/96 (63%), Positives = 65/96 (67%)
Frame = +2 / -2
Query: 305 SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAYSA 484
SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 410 SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*DFIT 231
Query: 485 VNPCEQPILAGCAATDGSDEARWWMRRGYLAP*PTM 592
+ P E I AGCAA DGSDE W + GYL P PTM
Sbjct: 230 LKPEEHWIFAGCAAIDGSDEPLW*ILCGYLGPYPTM 123
>gb|CA932541.1|CA932541 MTU5CS.P14.D02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 677
Score = 188 bits (404), Expect = 4e-047
Identities = 73/99 (73%), Positives = 87/99 (87%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP+RIHHR SSLPS+AAHPA+I CS GF+ + + +PN+LVGA+VGGPD
Sbjct: 121 YMVGYGPRYPQRIHHRGSSLPSMAAHPAKIQCSSGFSVMKSQSPDPNILVGAIVGGPDEH 300
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLAHSYGQL*A 298
DRFPDER+D+E SEPATY+NAPLVGALAYLAHS+GQL*A
Sbjct: 301 DRFPDERSDYEQSEPATYMNAPLVGALAYLAHSFGQL*A 417
Score = 127 bits (271), Expect = 8e-029
Identities = 60/96 (62%), Positives = 64/96 (66%)
Frame = +2 / -1
Query: 305 SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAYSA 484
SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT G +
Sbjct: 410 SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGSGD*DFIT 231
Query: 485 VNPCEQPILAGCAATDGSDEARWWMRRGYLAP*PTM 592
+ P E I AGCAA DGSDE W + GYL P PTM
Sbjct: 230 LKPEEHWIFAGCAAIDGSDEPLW*ILCGYLGPYPTM 123
>gb|BU825887.1|BU825887 UK114TC05 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 573
Score = 182 bits (393), Expect = 1e-045
Identities = 71/96 (73%), Positives = 84/96 (87%)
Frame = -1 / +2
Query: 585 GYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRF 406
GYG +YP+RIHHR SSLPS+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD DRF
Sbjct: 2 GYGPRYPQRIHHRGSSLPSMAAHPAKIQCSSGFSVMKSQSPNPNILVGAIVGGPDEHDRF 181
Query: 405 PDERNDHEHSEPATYINAPLVGALAYLAHSYGQL*A 298
PDER+D+E SEPATY+NAPLVGALAYLAHS+GQL*A
Sbjct: 182 PDERSDYEQSEPATYMNAPLVGALAYLAHSFGQL*A 289
Score = 125 bits (267), Expect = 3e-028
Identities = 59/94 (62%), Positives = 63/94 (67%)
Frame = +2 / -1
Query: 305 SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAYSA 484
SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 282 SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*DFIT 103
Query: 485 VNPCEQPILAGCAATDGSDEARWWMRRGYLAP*P 586
+ P E I AGCAA DGSDE W + GYL P P
Sbjct: 102 LKPEEHWIFAGCAAIDGSDEPLW*ILCGYLGPYP 1
>gb|DN489777.1|DN489777 T078C12.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T078C12 3', mRNA sequence
Length = 902
Score = 168 bits (362), Expect = 2e-041
Identities = 67/91 (73%), Positives = 77/91 (84%)
Frame = -1 / -2
Query: 570 YPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDERN 391
YP+RIHHR SSLP + AHPA+I CS GF+ + NPN+LVGA+VGGPD DRFPDER+
Sbjct: 655 YPQRIHHRGSSLP*MGAHPAKIQCSSGFSVMKFQSPNPNILVGAIVGGPDEHDRFPDERS 476
Query: 390 DHEHSEPATYINAPLVGALAYLAHSYGQL*A 298
D+E SEPATY+NAPLVGALAYLAHSYGQL*A
Sbjct: 475 DYEQSEPATYMNAPLVGALAYLAHSYGQL*A 383
Score = 112 bits (239), Expect = 2e-024
Identities = 54/89 (60%), Positives = 58/89 (65%)
Frame = +2 / +3
Query: 305 SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAYSA 484
SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 390 SWPYE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*NFIT 569
Query: 485 VNPCEQPILAGCAATDGSDEARWWMRRGY 571
+ P E I AGCA GSDE W + GY
Sbjct: 570 LKPEEHWIFAGCAPIYGSDEPLW*ILCGY 656
>gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004C07 5', mRNA sequence
Length = 638
Score = 155 bits (333), Expect = 2e-037
Identities = 57/91 (62%), Positives = 73/91 (80%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G KYP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA+VGGPD +
Sbjct: 199 YMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNR 378
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 379 DHFADDRNNYQQSEPATYINAPFVGALAFFS 471
>dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta glucanase, complete cds
Length = 1616
Score = 155 bits (333), Expect = 2e-037
Identities = 57/91 (62%), Positives = 73/91 (80%)
Frame = -1 / +2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G KYP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA+VGGPD +
Sbjct: 1223 YMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNR 1402
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 1403 DHFADDRNNYQQSEPATYINAPFVGALAFFS 1495
>dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta-glucanase, complete cds
Length = 4603
Score = 155 bits (333), Expect = 2e-037
Identities = 57/91 (62%), Positives = 73/91 (80%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G KYP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA+VGGPD +
Sbjct: 4131 YMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNR 4310
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 4311 DHFADDRNNYQQSEPATYINAPFVGALAFFS 4403
>gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_K22 3', mRNA sequence
Length = 946
Score = 153 bits (329), Expect = 8e-037
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 490 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 311
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 310 DNFADDRNNYQQSEPATYINAPFVGALAFFS 218
>gb|CX655021.1|CX655021 PO01003H07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01003H07 5', mRNA sequence
Length = 572
Score = 153 bits (329), Expect = 8e-037
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 102 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 281
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 282 DNFADDRNNYQQSEPATYINAPFVGALAFFS 374
>gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_F19 3', mRNA sequence
Length = 944
Score = 153 bits (329), Expect = 8e-037
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 409 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 230
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 229 DNFADDRNNYQQSEPATYINAPFVGALAFFS 137
>dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta glucanase, complete cds
Length = 4247
Score = 153 bits (329), Expect = 8e-037
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 3889 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 4068
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 4069 DNFADDRNNYQQSEPATYINAPFVGALAFFS 4161
>gb|CV253621.1|CV253621 WS0222.B21_I01 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0222_I01 3', mRNA sequence
Length = 417
Score = 153 bits (328), Expect = 1e-036
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 410 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 231
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 230 DNFVDDRNNYQQSEPATYINAPFVGALAFFS 138
>gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048A07 5', mRNA sequence
Length = 594
Score = 153 bits (328), Expect = 1e-036
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 283 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 462
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 463 DXFADDRNNYQQSEPATYINAPFVGALAFFS 555
>gb|CV270811.1|CV270811 WS0153.B21_A01 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_A01 3', mRNA sequence
Length = 519
Score = 152 bits (327), Expect = 2e-036
Identities = 55/91 (60%), Positives = 73/91 (80%)
Frame = -1 / -3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 382 YMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 203
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPATYINAP VGALA+ +
Sbjct: 202 DDFADDRNNYQRSEPATYINAPFVGALAFFS 110
>gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01036G06 5', mRNA sequence
Length = 735
Score = 152 bits (327), Expect = 2e-036
Identities = 56/91 (61%), Positives = 72/91 (79%)
Frame = -1 / +2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G KYP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA+VGGPD +
Sbjct: 413 YMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNR 592
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+RN+++ SEPA YINAP VGALA+ +
Sbjct: 593 DHFADDRNNYQQSEPAIYINAPFVGALAFFS 685
>gb|CX657138.1|CX657138 PO02030F03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030F03 5', mRNA sequence
Length = 583
Score = 152 bits (326), Expect = 2e-036
Identities = 56/91 (61%), Positives = 72/91 (79%)
Frame = -1 / +2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G KYP+ +HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA+VGGPD +
Sbjct: 176 YMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNR 355
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D+R +++ SEPATYINAP VGALA+ +
Sbjct: 356 DHFADDRXNYQQSEPATYINAPFVGALAFFS 448
>gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0152_M22 3', mRNA sequence
Length = 904
Score = 143 bits (307), Expect = 9e-034
Identities = 60/100 (60%), Positives = 67/100 (67%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG+K+PR+IHHR SSLPSV HPA I C G + NPNLL+GAVVGGPD
Sbjct: 396 YMVGYGSKFPRKIHHRGSSLPSVDQHPASINCQGGTPYFQSNDPNPNLLIGAVVGGPDKG 217
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLAHSYGQL*AP 295
D + D R D H+EP TYINAPLVG LAY L* P
Sbjct: 216 DSYSDSRADFVHTEPTTYINAPLVGLLAYFRSHPPPL*NP 97
>gb|BI119713.1|BI119713 F003P95Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 307
Score = 142 bits (305), Expect = 2e-033
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -1 / +3
Query: 528 VAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAP 349
+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD DRFPDER+D+E SEPATY+NAP
Sbjct: 9 MAAHPAKIQCSSGFSVMNSQSPNPNILVGAIVGGPDEHDRFPDERSDYEQSEPATYMNAP 188
Query: 348 LVGALAYLAHSYGQL*A 298
LVGALAYLAHS+GQL*A
Sbjct: 189 LVGALAYLAHSFGQL*A 239
Score = 103 bits (220), Expect = 9e-022
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = +2 / -1
Query: 299 A*SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAY 478
A*SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 238 A*SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*EF 59
Query: 479 SAVNPCEQPILAGCAA 526
+ P E I AGCAA
Sbjct: 58 ITLKPEEHWIFAGCAA 11
>gb|CK090420.1|CK090420 F003P95.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F003P95 3', mRNA sequence
Length = 371
Score = 142 bits (305), Expect = 2e-033
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -1 / -2
Query: 528 VAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAP 349
+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD DRFPDER+D+E SEPATY+NAP
Sbjct: 355 MAAHPAKIQCSSGFSVMNSQSPNPNILVGAIVGGPDEHDRFPDERSDYEQSEPATYMNAP 176
Query: 348 LVGALAYLAHSYGQL*A 298
LVGALAYLAHS+GQL*A
Sbjct: 175 LVGALAYLAHSFGQL*A 125
Score = 103 bits (220), Expect = 9e-022
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = +2 / +3
Query: 299 A*SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAY 478
A*SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 126 A*SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*EF 305
Query: 479 SAVNPCEQPILAGCAA 526
+ P E I AGCAA
Sbjct: 306 ITLKPEEHWIFAGCAA 353
>gb|CK100862.1|CK100862 F003P95.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F003P95 5', mRNA sequence
Length = 371
Score = 142 bits (305), Expect = 2e-033
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -1 / +2
Query: 528 VAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAP 349
+AAHPA+I CS GF+ + + NPN+LVGA+VGGPD DRFPDER+D+E SEPATY+NAP
Sbjct: 17 MAAHPAKIQCSSGFSVMNSQSPNPNILVGAIVGGPDEHDRFPDERSDYEQSEPATYMNAP 196
Query: 348 LVGALAYLAHSYGQL*A 298
LVGALAYLAHS+GQL*A
Sbjct: 197 LVGALAYLAHSFGQL*A 247
Score = 103 bits (220), Expect = 9e-022
Identities = 50/76 (65%), Positives = 53/76 (69%)
Frame = +2 / -3
Query: 299 A*SWP*ECAR*ASAPTSGALM*VAGSECSWSFRSSGNLSCMSGPPTTAPTSRLGLAPPAY 478
A*SWP E AR*ASAPT GA M*VAGS+CS S SSGNLSC SGPPT APT GL +
Sbjct: 246 A*SWPNE*AR*ASAPTRGAFM*VAGSDCS*SDLSSGNLSCSSGPPTIAPTRMFGLGD*EF 67
Query: 479 SAVNPCEQPILAGCAA 526
+ P E I AGCAA
Sbjct: 66 ITLKPEEHWIFAGCAA 19
>gb|CN523596.1|CN523596 GQ015M07.T3_C08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_C08 5', mRNA sequence
Length = 582
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 25 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 204
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 205 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 297
>gb|CV252315.1|CV252315 PX0011.B21_E13 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_E13 3', mRNA sequence
Length = 583
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 574 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 395
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 394 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 302
>gb|CV256402.1|CV256402 WS0243.B21_L24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_L24 3', mRNA sequence
Length = 481
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 391 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 212
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 211 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 119
>gb|DT470365.1|DT470365 WS01920.C21_K15 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_K15 3', mRNA sequence
Length = 519
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 416 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 237
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 236 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 144
>gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_K01 3', mRNA sequence
Length = 888
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 426 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 247
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 246 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 154
>gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02045_K07 3', mRNA sequence
Length = 897
Score = 142 bits (305), Expect = 2e-033
Identities = 58/91 (63%), Positives = 66/91 (72%)
Frame = -1 / -3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP RIHHR SSLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 532 YMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 353
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 352 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 260
>gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030C08 5', mRNA sequence
Length = 644
Score = 106 bits (227), Expect(2) = 3e-033
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +2
Query: 516 PARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGA 337
P RI C+ GF LY+ NPN+LVGA+VGGPD +D F D+RN+++ SEPATYINAP VGA
Sbjct: 278 PNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNRDHFADDRNNYQQSEPATYINAPFVGA 457
Query: 336 LAYLA 322
LA+ +
Sbjct: 458 LAFFS 472
Score = 54.7 bits (113), Expect(2) = 3e-033
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHP 514
YMVG+G KYP+ +HHR SS+PS+ AHP
Sbjct: 199 YMVGFGNKYPQHVHHRGSSVPSIHAHP 279
>dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1,4-beta-glucanase), complete
cds
Length = 1580
Score = 138 bits (296), Expect = 3e-032
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVG+G +YP+ +HHR SS+PS+ I C+ GF LY+ NPN+LVGA++GGPD +
Sbjct: 1215 YMVGFGNRYPQHVHHRGSSVPSIHDTRIGISCNDGFQFLYSSSPNPNVLVGAIIGGPDNR 1394
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D F D RN+++ SEPATYINAP VGALA+ +
Sbjct: 1395 DNFADSRNNYQQSEPATYINAPFVGALAFFS 1487
>gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B mRNA, complete cds
Length = 1461
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / +1
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 1291 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 1446
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 1171 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 1290
>gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_J18 3', mRNA sequence
Length = 917
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -2
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 340 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 185
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 460 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 341
>gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_K05 3', mRNA sequence
Length = 840
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -1
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 405 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 250
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 525 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 406
>gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A016P51 3', mRNA sequence
Length = 835
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 338 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 183
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 458 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 339
>gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 5', mRNA sequence
Length = 725
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / +2
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 320 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 475
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 200 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 319
>gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 3', mRNA sequence
Length = 725
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -2
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 406 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 251
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 526 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 407
>gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01029H05 5', mRNA sequence
Length = 698
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / +3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 543 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 698
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 423 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 542
>gb|CV270845.1|CV270845 WS0153.B21_B14 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_B14 3', mRNA sequence
Length = 550
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -1
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 406 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 251
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 526 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 407
>gb|BI129393.1|BI129393 G090P13Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 517
Score = 88.1 bits (186), Expect(2) = 4e-032
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / +3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 186 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 341
Score = 69.8 bits (146), Expect(2) = 4e-032
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 66 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 185
>gb|DT508961.1|DT508961 WS02422.BR_G12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_G12 5', mRNA sequence
Length = 364
Score = 137 bits (293), Expect = 7e-032
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = -1 / +2
Query: 576 AKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDE 397
A++ R+HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +D F D+
Sbjct: 2 AEFGTRVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNRDNFADD 181
Query: 396 RNDHEHSEPATYINAPLVGALAYLA 322
RN+++ SEPATYINAP VGALA+ +
Sbjct: 182 RNNYQQSEPATYINAPFVGALAFFS 256
>gb|DT513569.1|DT513569 WS02422.B21_G12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_G12 3', mRNA sequence
Length = 364
Score = 137 bits (293), Expect = 7e-032
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = -1 / -2
Query: 576 AKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQDRFPDE 397
A++ R+HHR SS+PS+ AHP RI C+ GF LY+ NPN+LVGA++GGPD +D F D+
Sbjct: 363 AEFGTRVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGAIIGGPDNRDNFADD 184
Query: 396 RNDHEHSEPATYINAPLVGALAYLA 322
RN+++ SEPATYINAP VGALA+ +
Sbjct: 183 RNNYQQSEPATYINAPFVGALAFFS 109
>gb|CV228635.1|CV228635 WS01910.B21_M09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01910_M09 3', mRNA sequence
Length = 524
Score = 88.1 bits (186), Expect(2) = 3e-031
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -2
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 406 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 251
Score = 66.6 bits (139), Expect(2) = 3e-031
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -1 / -2
Query: 591 MVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
MVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 523 MVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 407
>gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_K23
3', mRNA sequence
Length = 714
Score = 84.5 bits (178), Expect(2) = 5e-031
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = -1 / -3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +V LAY A
Sbjct: 403 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVEPLAYFA 248
Score = 69.8 bits (146), Expect(2) = 5e-031
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 523 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 404
>gb|DN491984.1|DN491984 V038E02.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V038E02 3', mRNA sequence
Length = 550
Score = 133 bits (286), Expect = 7e-031
Identities = 55/91 (60%), Positives = 64/91 (70%)
Frame = -1 / -3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
+MV YG +YP RIHHR SLPSV AHPARI C +G + NPN+ VGAVVGGP++
Sbjct: 539 HMVVYGPRYPLRIHHRGRSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGAVVGGPNIT 360
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 359 DAFPDSRPFFQESEPTTYINAPLVGLLAYFS 267
>gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0091_F12 5', mRNA sequence
Length = 506
Score = 83.1 bits (175), Expect(2) = 1e-030
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = -1 / +1
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA + LAY A
Sbjct: 298 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMXXXLAYFA 453
Score = 69.8 bits (146), Expect(2) = 1e-030
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 178 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 297
>gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 585
Score = 132 bits (282), Expect = 2e-030
Identities = 52/91 (57%), Positives = 60/91 (65%)
Frame = -1 / +1
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGY +YP+RIHHR SSLPSV HP I C +G + NPN+ VGA+VGGP
Sbjct: 277 YMVGYSDRYPQRIHHRGSSLPSVKDHPEFIACKEGSVYFNSSNPNPNVHVGAIVGGPSQD 456
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D + D R+D SEP TYINAP VG LAY A
Sbjct: 457 DSYDDNRDDFRKSEPTTYINAPFVGVLAYFA 549
>gb|CV264808.1|CV264808 WS02025.B21_I19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02025_I19 3', mRNA sequence
Length = 516
Score = 88.1 bits (186), Expect(2) = 6e-030
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -1 / -1
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D +PDER+D+ HSEPATYINA +VG LAY A
Sbjct: 405 HSANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 250
Score = 62.5 bits (130), Expect(2) = 6e-030
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -1 / -1
Query: 585 GYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
G+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 516 GFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 406
>gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004D08 5', mRNA sequence
Length = 603
Score = 78.0 bits (164), Expect(2) = 4e-029
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = -1 / +3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVG 340
++ NPN+L GA+VGGP+ D +PD+R+D+ HSEPATYINA +VG
Sbjct: 462 HSANPNPNILTGAIVGGPNQNDGYPDKRSDYSHSEPATYINAAMVG 599
Score = 69.8 bits (146), Expect(2) = 4e-029
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +3
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G +P+RIHHR SSLPS+A+HP IGC GF +
Sbjct: 342 YMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFF 461
>gb|DT520699.1|DT520699 WS02448.B21_E15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_E15 3', mRNA sequence
Length = 629
Score = 125 bits (268), Expect = 2e-028
Identities = 54/91 (59%), Positives = 62/91 (68%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALYAGGANPNLLVGAVVGGPDMQ 415
YMVGYG +YP I R SSLPSV AHPARI C +G + NPN+ GAVVGGP++
Sbjct: 412 YMVGYGPRYPLGIPPRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHGGAVVGGPNIP 233
Query: 414 DRFPDERNDHEHSEPATYINAPLVGALAYLA 322
D FPD R + SEP TYINAPLVG LAY +
Sbjct: 232 DVFPDSRPFFQESEPPTYINAPLVGLLAYFS 140
>gb|CX657952.1|CX657952 PO01007D06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01007D06 5', mRNA sequence
Length = 465
Score = 89.5 bits (189), Expect(2) = 8e-027
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -1 / +3
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYLA 322
++ NPN+L GA+VGGP+ D FPDER+D+ HSEPATYINA +VG LAY A
Sbjct: 90 HSANPNPNILTGAIVGGPNQNDGFPDERSDYSHSEPATYINAAMVGPLAYFA 245
Score = 50.6 bits (104), Expect(2) = 8e-027
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1 / +3
Query: 561 RIHHRASSLPSVAAHPARIGCSQGFTALY 475
RIHHR SSLPS+A+HP IGC GF +
Sbjct: 3 RIHHRGSSLPSLASHPQAIGCDSGFEPFF 89
>gb|DN491846.1|DN491846 V031G10.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V031G10 3', mRNA sequence
Length = 750
Score = 70.3 bits (147), Expect(2) = 4e-026
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -1 / -2
Query: 477 YAGGANPNLLVGAVVGGPDMQDRFPDERNDHEHSEPATYINAPLVGALAYL 325
++ NPN VGA++GGPD D++ D R+D+ H+EP TY+NA VG++A L
Sbjct: 362 FSSQPNPNTHVGAIIGGPDSNDQYKDLRSDYSHAEPTTYMNAAFVGSVAAL 210
Score = 67.5 bits (141), Expect(2) = 4e-026
Identities = 21/40 (52%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 594 YMVGYGAKYPRRIHHRASSLPSVAAHPARIGCSQGFTALY 475
YMVG+G+KYP ++HHR +S+PSV A P+++GC+ G+++ Y
Sbjct: 482 YMVGFGSKYPTQMHHRGASIPSVQALPSKVGCNDGYSSYY 363
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 268,814,558
Number of Sequences: 369679
Number of extensions: 3502748
Number of successful extensions: 78659
Number of sequences better than 1.0e-020: 70
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7146591814
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)