TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCT19a08.yg.2.1
         (645 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BD267264.1|  Compositions isolated from plant cells and ...   140   2e-043

>dbj|BD267264.1| Compositions isolated from plant cells and utilization of the same
           in modifying plant cell signal transduction
          Length = 551

 Score =  140 bits (300), Expect(2) = 2e-043
 Identities = 52/84 (61%), Positives = 65/84 (77%)
 Frame = +2 / +3

                                                                       
Query: 11  INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
           +NN L +C+P E+GLL+ +TVFD SFN LVGPLP  +  M  +EQLDVAHN L+G +P++
Sbjct: 141 LNNNLSACLPSEIGLLKNLTVFDASFNKLVGPLPDSIGQMDSLEQLDVAHNMLTGKIPQS 320

                                   
Query: 191 ICALPRLKNLTISYNFFTGEPPSC 262
           ICALP L N T SYNFFTGE P+C
Sbjct: 321 ICALPNLDNFTYSYNFFTGEAPNC 392




 Score = 55.6 bits (115), Expect(2) = 2e-043
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +2 / +3

                                         
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
           D+RNC+P+RP QRT QQC+AF S+P V+C+
Sbjct: 426 DKRNCIPSRPLQRTLQQCSAFLSRPGVNCS 515



  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 218,907,630
Number of Sequences: 355925
Number of extensions: 2670719
Number of successful extensions: 33850
Number of sequences better than 1.0e-020: 1
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8734658490
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)