TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCK13d03.yg.3.1
(2611 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR024240.1|DR024240 STRS1_63_B11.g1_A034 Shoot tip pitch... 329 e-120
gb|CF475218.1|CF475218 RTWW2_14_H06.g1_A021 Well-watered lo... 226 e-119
gb|DR683953.1|DR683953 EST1074029 Normalized pine embryo li... 338 e-119
gb|DR694469.1|DR694469 EST1084561 Normalized pine embryo li... 417 e-118
gb|DR068751.1|DR068751 RTDK1_2_E04.g1_A029 Roots, dark Pinu... 417 e-115
gb|DT638708.1|DT638708 EST1153639 Normalized pine embryo li... 401 e-115
gb|CF666460.1|CF666460 RTCNT1_23_A10.g1_A029 Root control P... 411 e-113
gb|CF671079.1|CF671079 RTCNT1_54_C10.g1_A029 Root control P... 228 e-109
gb|DR682125.1|DR682125 EST1072200 Normalized pine embryo li... 237 e-108
gb|DR024206.1|DR024206 STRS1_63_B11.b1_A034 Shoot tip pitch... 242 e-107
gb|DT631864.1|DT631864 EST1146795 Normalized pine embryo li... 338 e-105
gb|DR099434.1|DR099434 STRR1_55_C05.g1_A033 Stem Response R... 227 e-100
gb|DR099170.1|DR099170 STRR1_53_D05.g1_A033 Stem Response R... 228 1e-094
gb|DR018410.1|DR018410 STRS1_22_G03.g1_A034 Shoot tip pitch... 303 2e-094
gb|CO363132.1|CO363132 RTK1_7_G05.g1_A029 Roots minus potas... 240 4e-092
gb|DR056258.1|DR056258 RTCA1_29_C09.b1_A029 Roots minus cal... 238 7e-090
gb|BX680507.1|BX680507 BX680507 RS Pinus pinaster cDNA clon... 329 5e-089
gb|DR056330.1|DR056330 RTCA1_29_C09.g1_A029 Roots minus cal... 326 3e-088
gb|DR013884.1|DR013884 HEAT1_22_D06.b1_A029 Root at 37 C fo... 323 4e-087
gb|CO162180.1|CO162180 FLD1_33_D11.g1_A029 Root flooded Pin... 238 4e-084
gb|CF671009.1|CF671009 RTCNT1_54_C10.b1_A029 Root control P... 240 3e-082
gb|DR055806.1|DR055806 RTCA1_26_B12.b1_A029 Roots minus cal... 243 1e-076
gb|DR018345.1|DR018345 STRS1_22_G03.b1_A034 Shoot tip pitch... 281 2e-074
gb|DR169238.1|DR169238 RTPHOS1_31_B02.b1_A029 Roots minus p... 240 1e-073
dbj|BD224350.1| Materials and methods for the modification ... 172 1e-068
dbj|BD224413.1| Materials and methods for the modification ... 172 1e-068
gb|DR100370.1|DR100370 STRR1_63_D08.g1_A033 Stem Response R... 199 6e-068
gb|AW754572.1|AW754572 PC03H01 Pine TriplEx pollen cone lib... 243 4e-063
gb|DR099363.1|DR099363 STRR1_55_C05.b1_A033 Stem Response R... 231 2e-059
gb|BE431385.1|BE431385 NXNV_181_F03_F Nsf Xylem Normal wood... 229 6e-059
gb|DR099098.1|DR099098 STRR1_53_D05.b1_A033 Stem Response R... 229 8e-059
gb|AW290744.1|AW290744 NXNV046D07F Nsf Xylem Normal wood Ve... 222 1e-056
gb|CD027404.1|CD027404 NXNV046D07 Nsf Xylem Normal wood Ver... 222 1e-056
dbj|BD224352.1| Materials and methods for the modification ... 176 4e-056
dbj|BD224415.1| Materials and methods for the modification ... 174 1e-055
gb|DR169308.1|DR169308 RTPHOS1_31_B02.g1_A029 Roots minus p... 171 2e-055
gb|BE762088.1|BE762088 NXCI_076_H01_F NXCI (Nsf Xylem Compr... 199 8e-050
gb|DR068670.1|DR068670 RTDK1_2_E04.b1_A029 Roots, dark Pinu... 195 1e-048
gb|CF666393.1|CF666393 RTCNT1_23_A10.b1_A029 Root control P... 194 3e-048
gb|BF518339.1|BF518339 NXSI_038_B12_F NXSI (Nsf Xylem Side ... 172 8e-042
gb|CO162092.1|CO162092 FLD1_33_D11.b1_A029 Root flooded Pin... 170 4e-041
gb|BF516660.1|BF516660 NXSI_001_G06_F NXSI (Nsf Xylem Side ... 168 2e-040
gb|AW064907.1|AW064907 ST37C08 Pine TriplEx shoot tip libra... 144 3e-033
gb|AW064668.1|AW064668 ST34C05 Pine TriplEx shoot tip libra... 105 2e-028
>gb|DR024240.1|DR024240 STRS1_63_B11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_B11_A034 5', mRNA sequence
Length = 864
Score = 329 bits (713), Expect(2) = e-120
Identities = 139/214 (64%), Positives = 167/214 (78%)
Frame = +2 / +2
Query: 1229 MHANHFLVTDFLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFR 1408
MHAN FL++ LK +L F+GFVISDWEGIDRIT+PP ANYS SI VGAGIDM+M+P+
Sbjct: 2 MHANRFLISHVLKKQLGFKGFVISDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYN 181
Query: 1409 YTEFIDDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHREL 1588
+T F+ +LT+QV+ I MSRI+DAV RILRVKF MGLFE P + SLA +LG +EHREL
Sbjct: 182 FTYFMGNLTSQVKGGFISMSRINDAVRRILRVKFAMGLFEQPLANPSLANQLGSKEHREL 361
Query: 1589 AREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNT 1768
AREAVRKSLVLLKNGKS+ PLLPL K A KILV G+HA++LG QCGGWTI WQG SGN+
Sbjct: 362 AREAVRKSLVLLKNGKSTNNPLLPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNS 541
Query: 1769 TAGTTILSGIEATVDPSTQVVYSESPDSGVLADK 1870
T GTT L I+ V ST+VVY ++PD+ + K
Sbjct: 542 TIGTTFLEAIKLAVSSSTKVVYKKNPDADYVKGK 643
Score = 189 bits (408), Expect(2) = 9e-063
Identities = 99/174 (56%), Positives = 111/174 (63%)
Frame = -2 / -1
Query: 1749 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 1570
CH IVHPPH PR A +P TRIL AF +GS G D PFF TRDFLTAS A+S CS
Sbjct: 522 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFVDFPFFNNTRDFLTASLANSLCSL 343
Query: 1569 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNGTMI 1390
PS ARL G S P+ N T +IL TAS ILLM M TC VR + V L G++
Sbjct: 342 LPSWLARLGLARGCSKSPIANFTLKILRTASFILLMEMKPPLTCEVRLPIKYVKL*GSIT 163
Query: 1389 MSIPAPTPASIE*E*LA*GGVVIRSMPSQSEITKPLNLSLFLRKSVTRKWFACI 1228
MSIPAPT + I+ E*LA GG+VI S+PSQSEITKPL S FLR R ACI
Sbjct: 162 MSIPAPTLSKIDKE*LASGGLVILSIPSQSEITKPLKPSCFLRT*EMRNRLACI 1
Score = 124 bits (266), Expect(2) = e-120
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVV+GE PYAE +GDNLNLTIP G I++VCG+ KC+V+LISGRPLV++PYL
Sbjct: 647 FSYAIVVIGEAPYAEYYGDNLNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIKPYLPL 826
Query: 2051 MDALVAAWLPGS 2086
+DA VAAWLPG+
Sbjct: 827 VDAFVAAWLPGT 862
Score = 77.6 bits (163), Expect(2) = 9e-063
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -2 / -1
Query: 2088 SDPGSHAATSASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSA 1909
S PGSHAAT AS + R G TSGLP+++ T H P T I P G+V+ RLSP SA
Sbjct: 864 SVPGSHAATKASTNGR*GLITSGLPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA 685
Query: 1908 YGGSPTTTIA 1879
G SP TTIA
Sbjct: 684 *GASPITTIA 655
>gb|CF475218.1|CF475218 RTWW2_14_H06.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_14_H06_A021 5', mRNA sequence
Length = 777
Score = 226 bits (489), Expect(2) = e-119
Identities = 96/133 (72%), Positives = 112/133 (84%)
Frame = +2 / +3
Query: 1454 VIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNG 1633
+I MSRI+DAV RILRVKFTMGLFE+P + SL +LG + HRELAREAVRKSLVLLKNG
Sbjct: 6 LISMSRINDAVRRILRVKFTMGLFEHPMANPSLVNQLGNKVHRELAREAVRKSLVLLKNG 185
Query: 1634 KSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVD 1813
KS+ PLLPL K A KILVAG+HA++LG QCGGWTITWQG SGN+T GTTIL I++TV
Sbjct: 186 KSASKPLLPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVS 365
Query: 1814 PSTQVVYSESPDS 1852
PST+VVY E+PD+
Sbjct: 366 PSTEVVYQENPDA 404
Score = 225 bits (486), Expect(2) = e-119
Identities = 88/116 (75%), Positives = 99/116 (85%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 426 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 605
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFP 2218
+DA VAAWLPG+ GQGV DV+FGD GF GKL RTWFKSVDQLPMNVGD HYDPLFP
Sbjct: 606 IDAFVAAWLPGTXGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFP 773
Score = 153 bits (329), Expect(2) = 2e-068
Identities = 70/113 (61%), Positives = 79/113 (69%)
Frame = -2 / -3
Query: 2217 GKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSASMSPRY 2038
G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT AS++ R
Sbjct: 772 GNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR* 593
Query: 2037 GSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 592 GSITSGLPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMA 434
Score = 128 bits (274), Expect(2) = 2e-068
Identities = 69/129 (53%), Positives = 74/129 (57%)
Frame = -2 / -3
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG S TT V G TV I RI PC VIVHPPH PR AW+PATRI AF
Sbjct: 400 SGFS**TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAF 221
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
+GS G D PFF TRDFLTAS A+S C+ PS RL G S PMVN T +IL
Sbjct: 220 LFKGSKGLLADFPFFNSTRDFLTASLANSLCTLLPSWLTRLGLAMGCSKSPMVNFTLKIL 41
Query: 1488 *TASSILLM 1462
TAS IL M
Sbjct: 40 RTASFILDM 14
>gb|DR683953.1|DR683953 EST1074029 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAN27 3' end, mRNA sequence
Length = 896
Score = 338 bits (732), Expect(2) = e-119
Identities = 137/186 (73%), Positives = 155/186 (83%)
Frame = +2 / +3
Query: 449 AEYLKYKDPKQPVAVRIKDLLGRMTLAEKIGQMTQIERENATADALAKYFIGSVLSGGGS 628
++YLKYKDP QP+ R++DLL RMTLAEKIGQMTQIER ATAD + Y+IGSVLSGGGS
Sbjct: 138 SKYLKYKDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGS 317
Query: 629 VXXXXXXXXXXXXMVTEMQKGALSTRLGIPIIYGIDAVHGHNNVYKATIFPHNVGLGATR 808
V +V +QKGALSTRL IP++YGIDAVHGHNNVY ATIFPHNVGLGATR
Sbjct: 318 VPAPKASPDTWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATR 497
Query: 809 DPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSLTSLISG 988
DPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESYSEDPK+V+++T +ISG
Sbjct: 498 DPDLARRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISG 677
Query: 989 LQGDAP 1006
LQG AP
Sbjct: 678 LQGQAP 695
Score = 225 bits (486), Expect(2) = 2e-073
Identities = 116/184 (63%), Positives = 126/184 (68%)
Frame = -2 / -2
Query: 1005 GASPCRPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVASPIL 826
GA PCRPE+ V T FGSSL*LS*QRPH GSLQTA GA +PVALTS+AVA+PIL
Sbjct: 694 GACPCRPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVAAPIL 515
Query: 825 LTRSGSLVAPSPTL*GKIVAL*TLLCPCTASIP*MIGIPRRVERAPFCISVTMXXXXXXX 646
L +SGSLVAPSPTL*GK+VA *TLL PCTASIP ++GI RRV+RAPF T
Sbjct: 514 LAKSGSLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIHVSGD 335
Query: 645 XXXXGTLPPPLSTLPMKYXXXXXXXXXXXSICVIWPIFSARVIRPSRSLMRTATGCFGSL 466
GTLPPPLSTLPM SI VI PIFSARVIR S+S R G GSL
Sbjct: 334 ALGAGTLPPPLSTLPM**FFITSAVATDLSIWVICPIFSARVIRASKSSTRALMG*DGSL 155
Query: 465 YLRY 454
YLRY
Sbjct: 154 YLRY 143
Score = 113 bits (242), Expect(2) = e-119
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = +2 / +3
Query: 1007 ADSAGRPYVGGSKKVAACAKHYVGDGGTHNGINENNTIIDTHGLLSIHMPPYYNSIIRGV 1186
A + G P++ G VAACAKH+VGDGGT +GINENNT+I+ GL+ IHM PY+++I RGV
Sbjct: 690 APTKGIPFMAGQSNVAACAKHFVGDGGTTDGINENNTVINYKGLVKIHMAPYFDAIARGV 869
Query: 1187 STVMVSYSS 1213
ST+M+SYSS
Sbjct: 870 STIMISYSS 896
Score = 92.7 bits (196), Expect(3) = 7e-031
Identities = 42/106 (39%), Positives = 62/106 (58%)
Frame = -1 / -1
Query: 1012 IRRSVTLQARDE*SQ*LDNLWILTVALIAASPSWISTDRYTGSKGVRXXXXXXXXXXXXX 833
+RRS+ LQ RD LDN WIL +ALIAA+PS IS + T SK V
Sbjct: 701 LRRSLPLQTRDNLCHGLDNFWILAIALIAAAPSRISANSNTRSKHVLNASSSNFQSCSSS 522
Query: 832 XXXNEVRVPGSSKPDVVRENSSFVDVVVPMHCIDTVDDRYTQTRRK 695
+++R+ GSSKP++VRE+ S +D++V M+ I+ + +T R+
Sbjct: 521 NSSSQIRISGSSKPNIVREDGSPIDIIVAMYSINPIHHGDLKTSRQ 384
Score = 85.4 bits (180), Expect(3) = 1e-021
Identities = 52/143 (36%), Positives = 66/143 (46%)
Frame = +1 / +2
Query: 568 RHGRRAGQILHXXXXXXXXXXXCSSGVCSGLGRHGDRDAEGRSFYASGYTDHLRYRCSAW 747
RH R ++LH C+ + + G EG Y+S + C W
Sbjct: 257 RHCRCYEKLLHWECTERRRERACA*SISGYMD*LGRWAPEGCPVYSSSDPHDVWD*CCTW 436
Query: 748 AQQRLQSYYFPSQRRAWSYQGP*PR*ENWRSNCXXXXXYWNSLRLCSLYSGL*RSKMGTL 927
Q L Y+ PSQ AWSYQ * *+NW YW+S+R+CS+ L RS MG L
Sbjct: 437 PQ*CLWGYHLPSQCWAWSYQRS*FG*KNWSCYSFGS*SYWHSIRVCSVCCCLQRSSMGPL 616
Query: 928 L*ELQ*GSKGCPVTDFTHLWPAR 996
L*EL GSK C D +L AR
Sbjct: 617 L*EL*RGSKNCQGHDKDYLGSAR 685
Score = 73.5 bits (154), Expect(2) = 2e-073
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = -2 / -2
Query: 1212 LE*ETMTVETPRMIEL**GGIWMLSSPCVSMIVLFSLIPLCVPPSPT*CFAHAATFLLPP 1033
LE*E + VETP + *G +W+ ++P M VLFSL+P VPPSPT C A AATF P
Sbjct: 895 LE*EIIMVETPLAMASK*GAMWIFTNPL*LMTVLFSLMPSVVPPSPTKCLAQAATFDCPA 716
Query: 1032 TYGLP 1018
G+P
Sbjct: 715 IKGIP 701
Score = 48.3 bits (99), Expect(3) = 7e-031
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -1 / -1
Query: 556 DLRHLADLFGESHPTQQVLDANSDGLLWVLVLEVL 452
+L HL++L +SHP QQVL + DGL WVLV ++L
Sbjct: 245 NLGHLSNLLCQSHPRQQVLHTSIDGLRWVLVFKIL 141
Score = 40.9 bits (83), Expect(3) = 7e-031
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = -1 / -1
Query: 1210 GVGDHDRGDTSDDRVVVRRHMDAQQPVCVDDRVVLVDSVMRSTITDIVLRARSDLLTSPN 1031
G+ +H+ GD S + + + H+D +DD V+L+D++ S IT VL ++ S +
Sbjct: 893 GIRNHNGGDASGNGIKIGGHVDFY*SFIIDDSVILIDAIGCSPITHKVLSTSCNI*LSSH 714
Query: 1030 IR 1025
R
Sbjct: 713 KR 708
Score = 33.1 bits (66), Expect(3) = 1e-021
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1 / +2
Query: 1066 ALCR*WWNA*RNQREQHDHRHTRAAEHPYASLLQLYHPRCLHGHGLLLQ 1212
ALC *W N +Q E H H+ R +++P+ L + R LH + L Q
Sbjct: 749 ALCG*WGNNRWHQ*E*HCHQL*RISKNPHGPLF*CHCQRRLHHYDFLFQ 895
Score = 24.0 bits (46), Expect(3) = 1e-021
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 463 VQGPKAARRCSHQGPAGS 516
+QGP +A +CS G AG+
Sbjct: 152 IQGPISAHQCSCGGLAGA 205
>gb|DR694469.1|DR694469 EST1084561 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC87 3' end, mRNA sequence
Length = 838
Score = 417 bits (905), Expect(2) = e-118
Identities = 171/265 (64%), Positives = 205/265 (77%)
Frame = +2 / +1
Query: 1076 GDGGTHNGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVKMHANHFLVT 1255
GDGGT GINENNT+ + L +HM PY +++ +GVST+M SYSSWNGVKMHA+H+L+T
Sbjct: 1 GDGGTTGGINENNTVASYYDLYRVHMLPYVDALAKGVSTIMASYSSWNGVKMHASHYLLT 180
Query: 1256 DFLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFRYTEFIDDLT 1435
LK+++ F+GF+ISDWE IDRIT+PP ANYSYSI A + AGIDM+MVPF + +ID+LT
Sbjct: 181 RILKDRMGFKGFIISDWEAIDRITSPPGANYSYSISASINAGIDMVMVPFNFQTYIDELT 360
Query: 1436 TQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSL 1615
V + VI MSRIDDAV RILRVKF GLFE+P D SL G +G HRELAREAVRKSL
Sbjct: 361 ALVNSNVISMSRIDDAVRRILRVKFVAGLFEHPKTDRSLLGMVGNLAHRELAREAVRKSL 540
Query: 1616 VLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSG 1795
VLLKNGK PLLPL KKA KILVAGSHA++LG QCGGWTI+W+G SG TT GTTIL
Sbjct: 541 VLLKNGKMPGKPLLPLDKKAPKILVAGSHADNLGYQCGGWTISWEGGSGATTVGTTILDA 720
Query: 1796 IEATVDPSTQVVYSESPDSGVLADK 1870
I+ V PST+VVY ++PD+ K
Sbjct: 721 IKQAVSPSTEVVYEQNPDANFTKGK 795
Score = 216 bits (466), Expect(2) = 1e-056
Identities = 116/223 (52%), Positives = 132/223 (59%)
Frame = -2 / -3
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG YTT V G T + R+ P +IVHPPHW PR A LPAT I AF
Sbjct: 773 SGFCSYTTSVDGLTACFMASRMVVPTVVAPLPPSQLIVHPPHWYPRLSA*LPATSIFGAF 594
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
RG+NG PFF+RTRD TAS ASS C+ P+ P + S G SN+P NLT RIL
Sbjct: 593 LSRGNNGFPGIFPFFKRTRDLRTASLASSLCARLPTMPNKERSVFGCSNKPATNLTLRIL 414
Query: 1488 *TASSILLMGMTLF*TCVVRSSMNSVYLNGTMIMSIPAPTPASIE*E*LA*GGVVIRSMP 1309
TASSI LM +TL T V SSM L GT+ MSIPA A I * * A GG VI S+
Sbjct: 413 RTASSIRLMEITLEFTRAVSSSM*VWKLKGTITMSIPALIEAEIL*L*FAPGGEVILSIA 234
Query: 1308 SQSEITKPLNLSLFLRKSVTRKWFACIFTPFQLE*ETMTVETP 1180
SQSE+ PLN L + V R W ACIFTPFQLE*+ M V+TP
Sbjct: 233 SQSEMMNPLNPILSFKMRVRR*WLACIFTPFQLE*DAMMVDTP 105
Score = 29.0 bits (57), Expect(2) = e-118
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPY 1909
+ YAI V+GEPPY
Sbjct: 799 FSYAIAVIGEPPY 837
Score = 26.3 bits (51), Expect(2) = 1e-056
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 1116 VLFSLIPLCVPPS 1078
VLFSLIP VPPS
Sbjct: 41 VLFSLIPPVVPPS 3
>gb|DR068751.1|DR068751 RTDK1_2_E04.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_E04_A029 5', mRNA sequence
Length = 780
Score = 417 bits (905), Expect = e-115
Identities = 173/257 (67%), Positives = 206/257 (80%)
Frame = +2 / +2
Query: 1049 VAACAKHYVGDGGTHNGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVK 1228
VAACAKH+VGDGGT GI+ENNT+ L++ HM PY+++I +GVST+MVSYSSWNGVK
Sbjct: 8 VAACAKHFVGDGGTTKGIDENNTVSSYKRLVNTHMAPYFDAIAKGVSTIMVSYSSWNGVK 187
Query: 1229 MHANHFLVTDFLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFR 1408
MHAN FL++ LK +L F+GFVISDWEGIDRIT+PP ANYS SI VGAGIDM+M+P+
Sbjct: 188 MHANRFLISHVLKKQLGFKGFVISDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYN 367
Query: 1409 YTEFIDDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHREL 1588
+T F+ +LT+QV+ IP+SRI+DAV RILRVKFTMGLFE P + SLA +LG +EHREL
Sbjct: 368 FTYFMGNLTSQVKGGFIPISRINDAVRRILRVKFTMGLFEQPLANPSLANQLGSKEHREL 547
Query: 1589 AREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNT 1768
AREAVRKSLVLLKNGKS PLLPL K A KILV G+HA++LG QCGGWTI WQG SGN+
Sbjct: 548 AREAVRKSLVLLKNGKSMNNPLLPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNS 727
Query: 1769 TAGTTILSGIEATVDPS 1819
T GTT L I+ V S
Sbjct: 728 TIGTTFLEAIKLAVSSS 778
Score = 264 bits (571), Expect = 2e-069
Identities = 136/235 (57%), Positives = 156/235 (66%)
Frame = -2 / -1
Query: 1749 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 1570
CH IVHPPH PR A +P TRIL AF +GS G D PFF TRDFLTAS A+S CS
Sbjct: 708 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFIDFPFFNNTRDFLTASLANSLCSL 529
Query: 1569 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNGTMI 1390
PS ARL G S P+VN T +IL TAS ILLMGM TC VR + V L G++
Sbjct: 528 LPSWLARLGLARGCSKSPIVNFTLKILRTASFILLMGMKPPLTCEVRLPIKYVKL*GSIT 349
Query: 1389 MSIPAPTPASIE*E*LA*GGVVIRSMPSQSEITKPLNLSLFLRKSVTRKWFACIFTPFQL 1210
MSIPAPT + I+ E*LA GG+VI S+PSQSEITKPL S FLR R ACIFTPFQL
Sbjct: 348 MSIPAPTLSKIDKE*LASGGLVILSIPSQSEITKPLKPSCFLRT*EMRNRLACIFTPFQL 169
Query: 1209 E*ETMTVETPRMIEL**GGIWMLSSPCVSMIVLFSLIPLCVPPSPT*CFAHAATF 1045
E*+T+ VETP + *G + +L++ + VLFS IPL VPPSPT C A AATF
Sbjct: 168 E*DTIMVETPLAMASK*GAM*VLTNLL*LLTVLFSSIPLVVPPSPTKCLAQAATF 4
Score = 74.4 bits (156), Expect(2) = 1e-027
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = -1 / -3
Query: 1330 SSDPINALPVGNHKTPKLELVLEKIRD*EMVRVHLHSVPAGVGDHDRGDTSDDRVVVRRH 1151
+S +N P+ N+K + +L+L+ +R+ + V +HLHSVPA +G H+ D+ D + +R H
Sbjct: 289 TSYSVNTFPI*NNKALEAKLLLKDMRNEKSVSMHLHSVPA*IGHHNGRDSFGDGIEIRGH 110
Query: 1150 MDAQQPVCVDDRVVLVDSVMRSTITDIVL 1064
+ D V+L+D++ RSTIT VL
Sbjct: 109 VSVD*SFITADSVILIDTLGRSTITHKVL 23
Score = 71.2 bits (149), Expect(2) = 1e-027
Identities = 35/105 (33%), Positives = 58/105 (55%)
Frame = -1 / -3
Query: 1681 LAGLLREGQQRSVGGLAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELD 1502
L +L + + R V L++ Q FP+ F+ Q PV L +L G AR+G R+ E++H E
Sbjct: 640 LGSILIQRK*RIVH*LSIFQ*Y*RFPNSFSCQLPVLLAAKLVG*ARIGQRLFEESHREFY 461
Query: 1501 TKDPVDGVVDSAHGDDLVLNLCRQVVDEFCVPEWNHDHVNSSTNT 1367
+++ ++ A+G++ L+L QV + C H HVN T+T
Sbjct: 460 SQNSSHSIIYPANGNETTLDLRSQVAHKICEIVGKHHHVNPCTHT 326
>gb|DT638708.1|DT638708 EST1153639 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHI44 3' end, mRNA sequence
Length = 865
Score = 401 bits (871), Expect(2) = e-115
Identities = 165/250 (66%), Positives = 196/250 (78%)
Frame = +2 / +3
Query: 1076 GDGGTHNGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVKMHANHFLVT 1255
GDGGT GINENNT+ + L +HM PY +++ +GVST+M SYSSWNGVKMHA+H+L+T
Sbjct: 9 GDGGTTGGINENNTVASYYDLYRVHMLPYVDALAKGVSTIMASYSSWNGVKMHASHYLLT 188
Query: 1256 DFLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFRYTEFIDDLT 1435
LK+++ F+GF+ISDWE IDRIT+PP ANYSYSI A + AGIDM+MVPF + +ID+LT
Sbjct: 189 RILKDRMGFKGFIISDWEAIDRITSPPGANYSYSISASINAGIDMVMVPFNFQTYIDELT 368
Query: 1436 TQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSL 1615
V + VI MSRIDDAV RILRVKF GLFE+P D SL G +G HRELAREAVRKSL
Sbjct: 369 ALVNSNVISMSRIDDAVRRILRVKFVAGLFEHPKTDRSLLGMVGNLAHRELAREAVRKSL 548
Query: 1616 VLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSG 1795
VLLKNGK PLLPL KKA KILVAGSHA++LG QCGGWTI+W+G SG TT GTTIL
Sbjct: 549 VLLKNGKMPGKPLLPLDKKAPKILVAGSHADNLGYQCGGWTISWEGGSGATTVGTTILDA 728
Query: 1796 IEATVDPSTQ 1825
I+ V PST+
Sbjct: 729 IKQAVSPSTR 758
Score = 205 bits (442), Expect(2) = 2e-054
Identities = 106/188 (56%), Positives = 120/188 (63%)
Frame = -2 / -1
Query: 1743 VIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFP 1564
+IVHPPHW PR A LPAT I AF RG+NG PFF+RTRD TAS ASS C+ P
Sbjct: 676 LIVHPPHWYPRLSA*LPATSIFGAFLSRGNNGFPGIFPFFKRTRDLRTASLASSLCARLP 497
Query: 1563 SSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNGTMIMS 1384
+ P + S G SN+P NLT RIL TASSI LM +TL T V SSM L GT+ MS
Sbjct: 496 TMPNKERSVFGCSNKPATNLTLRILRTASSIRLMEITLEFTRAVSSSM*VWKLKGTITMS 317
Query: 1383 IPAPTPASIE*E*LA*GGVVIRSMPSQSEITKPLNLSLFLRKSVTRKWFACIFTPFQLE* 1204
IPA A I * * A GG VI S+ SQSE+ PLN L + V R W ACIFTPFQLE*
Sbjct: 316 IPALIEAEIL*L*FAPGGEVILSIASQSEMMNPLNPILSFKMRVRR*WLACIFTPFQLE* 137
Query: 1203 ETMTVETP 1180
+ M V+TP
Sbjct: 136 DAMMVDTP 113
Score = 36.3 bits (73), Expect(2) = e-115
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGD 1927
+ YAI V+GEPPY E+ GD
Sbjct: 808 FSYAIAVIGEPPYVESTGD 864
Score = 29.5 bits (58), Expect(2) = 2e-054
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 1116 VLFSLIPLCVPPSP 1075
VLFSLIP VPPSP
Sbjct: 49 VLFSLIPPVVPPSP 8
>gb|CF666460.1|CF666460 RTCNT1_23_A10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_A10_A029 5', mRNA sequence
Length = 780
Score = 411 bits (891), Expect = e-113
Identities = 169/258 (65%), Positives = 209/258 (81%)
Frame = +2 / +1
Query: 1079 DGGTHNGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVKMHANHFLVTD 1258
+G GINENNT+I GL+ IHM Y+++I +GVSTVMVSYSSWNG KMHAN FLV+
Sbjct: 1 EGRKTEGINENNTVISYKGLVHIHMAAYFDAIAKGVSTVMVSYSSWNGRKMHANRFLVSR 180
Query: 1259 FLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFRYTEFIDDLTT 1438
LK +L F+GFVISDW+GIDRIT+P ANYS S+ GV AGIDM+MVP+ + +FI+DL++
Sbjct: 181 VLKKQLGFKGFVISDWQGIDRITSPAGANYSLSVFDGVSAGIDMVMVPYNFKDFINDLSS 360
Query: 1439 QVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLV 1618
QV++ +IPM+RI+DAV RILRVKFTMGLFE+P + SLA +LG +EHRELAREAVRKSLV
Sbjct: 361 QVKSGLIPMTRINDAVRRILRVKFTMGLFEHPLSNPSLANQLGSKEHRELAREAVRKSLV 540
Query: 1619 LLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGI 1798
LLKNGKS+ PLLPL K A K+LVAG+H ++LG QCGGWT+ WQG SGN T GTTIL I
Sbjct: 541 LLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGYQCGGWTMEWQGLSGNITVGTTILEAI 720
Query: 1799 EATVDPSTQVVYSESPDS 1852
+ V PST+VVY ++PD+
Sbjct: 721 KLAVSPSTEVVYEQNPDA 774
Score = 271 bits (587), Expect = 1e-071
Identities = 140/256 (54%), Positives = 159/256 (62%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T + I RI PCH IVHPPH PR W+PATR L AF
Sbjct: 770 SGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATRTLEAF 591
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
F +GS G D PFF T+DFLTAS A+S CS PS ARL G SN PMVN T IL
Sbjct: 590 FSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARLGLLRGCSNSPMVNFTLNIL 411
Query: 1488 *TASSILLMGMTLF*TCVVRSSMNSVYLNGTMIMSIPAPTPASIE*E*LA*GGVVIRSMP 1309
TAS IL+MG+ TC RS M S+ L GT+ MSIPA TP+ + E*LA G+VI S+P
Sbjct: 410 LTASFILVMGIKPLFTCEDRSLMKSLKL*GTITMSIPALTPSKTDKE*LAPAGLVILSIP 231
Query: 1308 SQSEITKPLNLSLFLRKSVTRKWFACIFTPFQLE*ETMTVETPRMIEL**GGIWMLSSPC 1129
QSEITKPL S FLR TRK FACIF PFQLE*ET+TVETP + * +WM ++P
Sbjct: 230 CQSEITKPLKPSCFLRTRETRKRFACIFRPFQLE*ETITVETPLAMASK*AAMWMCTNPL 51
Query: 1128 VSMIVLFSLIPLCVPP 1081
+ VLFSLIP P
Sbjct: 50 *LITVLFSLIPSVFRP 3
Score = 165 bits (355), Expect = 1e-039
Identities = 80/249 (32%), Positives = 133/249 (53%)
Frame = -1 / -1
Query: 1840 LRVHHLRAGVHGGLDPGEDRRAGSSVAAASLPRDRPPPXXXXXXXXXXXXXXDLAGLLRE 1661
L ++H G D ++ + V+ SLP RP +L +L +
Sbjct: 762 LLINHFSRGADS*FDSFKNSCSYGYVST*SLPFHRPSTTLITQIIRMGSCNKNLGSILLQ 583
Query: 1660 GQQRSVGGLAVLQENQGFPDGFARQFPVFLLPELAGEARVGVRVLEQAHGELDTKDPVDG 1481
+QR VG L + Q+ Q FP+ F+RQ PV L +L G AR+ R+L+ HGE ++ +
Sbjct: 582 REQRLVG*LPIFQQYQRFPNSFSRQLPVLLAAKLVG*ARIAQRMLK*PHGEFYSQYSSNC 403
Query: 1480 VVDSAHGDDLVLNLCRQVVDEFCVPEWNHDHVNSSTNTSLNXXXXXXXXRSSDPINALPV 1301
++ S+HGD L+L RQ+V+E NH HVN T+T N +S +N LP+
Sbjct: 402 IIYSSHGDQTTLHLRRQIVNEVFEIVGNHHHVNPCTHTIKN*QRVISTSWASYSVNTLPI 223
Query: 1300 GNHKTPKLELVLEKIRD*EMVRVHLHSVPAGVGDHDRGDTSDDRVVVRRHMDAQQPVCVD 1121
N+K + +L+L+ R+ + VRVHL ++P +G+H+ GD+ + + + RH+D Q D
Sbjct: 222 *NNKALEAKLLLKNTRNKKTVRVHLPAIPTRIGNHNGGDSFGNGIKIGRHVDVHQSFITD 43
Query: 1120 DRVVLVDSV 1094
++L+D++
Sbjct: 42 YSIILIDTL 16
>gb|CF671079.1|CF671079 RTCNT1_54_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_54_C10_A029 5', mRNA sequence
Length = 713
Score = 228 bits (492), Expect(2) = e-109
Identities = 89/116 (76%), Positives = 100/116 (86%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 362 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 541
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFP 2218
+DA VAAWLPG+EGQGV DV+FGD GF GKL RTWFKSVDQLPMNVGD HYDPLFP
Sbjct: 542 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFP 709
Score = 189 bits (407), Expect(2) = e-109
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +2 / +2
Query: 1514 MGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVA 1693
MGLF +P + SL +LG + HRELAREAVRKSLVLLKNGKS+ PLLPL K A KILVA
Sbjct: 2 MGLF*HPMANPSLVNQLGSKVHRELAREAVRKSLVLLKNGKSASKPLLPLNKNAAKILVA 181
Query: 1694 GSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
G+HA++LG QCGGWTITWQG SGN+T GTTIL I++TV PST+VVY E+PD+
Sbjct: 182 GTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDA 340
Score = 153 bits (329), Expect(2) = 5e-062
Identities = 70/113 (61%), Positives = 79/113 (69%)
Frame = -2 / -3
Query: 2217 GKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSASMSPRY 2038
G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT AS++ R
Sbjct: 708 GNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKASINGR* 529
Query: 2037 GSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 528 GSITSGLPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMA 370
Score = 106 bits (227), Expect(2) = 5e-062
Identities = 57/112 (50%), Positives = 61/112 (54%)
Frame = -2 / -3
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG S TT V G TV I RI PC VIVHPPH PR AW+PATRI AF
Sbjct: 336 SGFS**TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAF 157
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPM 1513
+GS G D PFF TRDFLTAS A+S C+ PS RL G PM
Sbjct: 156 LFKGSKGLLADFPFFNSTRDFLTASLANSLCTLLPSWLTRLGLAMGC*KSPM 1
>gb|DR682125.1|DR682125 EST1072200 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA729, mRNA sequence
Length = 896
Score = 237 bits (513), Expect(3) = e-108
Identities = 93/122 (76%), Positives = 104/122 (85%)
Frame = +2 / -1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAE GDN NLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 521 FSYAIVVVGEAPYAEMKGDNFNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIEPYLPL 342
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGD+GF GKLPRTWFKSVDQLPMNVGD HYDPLFP GFG
Sbjct: 341 VDAFVAAWLPGTEGQGVTDVIFGDHGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFG 162
Query: 2231 LT 2236
LT
Sbjct: 161 LT 156
Score = 175 bits (376), Expect(3) = e-108
Identities = 73/104 (70%), Positives = 85/104 (81%)
Frame = +2 / -1
Query: 1541 DSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGN 1720
D SLA +LG +EHRELAREAVRKSLVLLKNGKS+ PLLPL K A KILVAG+H ++LG
Sbjct: 854 DPSLANQLGSKEHRELAREAVRKSLVLLKNGKSASKPLLPLDKNAPKILVAGTHPDNLGY 675
Query: 1721 QCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
QCGGWTI WQG SGN+T GTTIL I+ +V PST VVY ++PD+
Sbjct: 674 QCGGWTIEWQGLSGNSTIGTTILEAIKFSVSPSTDVVYQQNPDA 543
Score = 157 bits (337), Expect(2) = 2e-061
Identities = 72/119 (60%), Positives = 81/119 (68%)
Frame = -2 / +1
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+P P G GS*C SPTF+G+ ST LNHV GSFP NP*SP TS TP PS PGSHAAT A
Sbjct: 157 VNPNPKGNKGS*CLSPTFIGN*STLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATKA 336
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S + R GS T GLP++ T H P T I P GIV+ +LSP +SA G SPTTTIA
Sbjct: 337 STNGR*GSITRGLPDINITRHFKEPQTFLIVSPPLKGIVKLKLSPFISA*GASPTTTIA 513
Score = 101 bits (215), Expect(2) = 2e-061
Identities = 55/103 (53%), Positives = 57/103 (55%)
Frame = -2 / +1
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T I RI PCH IVHPPH PR +PATRIL AF
Sbjct: 547 SGFC**TTSVEGLTENLIASRIVVPMVEFPLNPCHSIVHPPH**PRLSG*VPATRILGAF 726
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLES 1540
RGS G D PFF TRDFLTAS A+S CS PS ARL S
Sbjct: 727 LSRGSKGLLADFPFFNNTRDFLTASLANSLCSLLPSWLARLGS 855
Score = 22.6 bits (43), Expect(3) = e-108
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 1505 KFTMGLFEN 1531
KFTMGLFE+
Sbjct: 889 KFTMGLFEH 863
>gb|DR024206.1|DR024206 STRS1_63_B11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_B11_A034 3', mRNA sequence
Length = 869
Score = 242 bits (523), Expect(2) = e-107
Identities = 93/123 (75%), Positives = 107/123 (86%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVV+GE PYAE +GDNLNLTIP G I++VCG+ KC+V+LISGRPLV++PYL
Sbjct: 335 FSYAIVVIGEAPYAEYYGDNLNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIKPYLPL 514
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGDYGF GKLPRTWFKSVDQLPMNVGD HYDPLFP GFG
Sbjct: 515 VDAFVAAWLPGTEGQGVTDVIFGDYGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFG 694
Query: 2231 LTT 2239
L+T
Sbjct: 695 LST 703
Score = 168 bits (362), Expect(2) = e-107
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = +2 / +2
Query: 1547 SLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQC 1726
SLA +LG +EHRELAREAVRKSLVLLKNGKS+ PLLPL K A KILV G+HA++LG QC
Sbjct: 8 SLANQLGSKEHRELAREAVRKSLVLLKNGKSTNNPLLPLNKNASKILVVGTHADNLGYQC 187
Query: 1727 GGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVLADK 1870
GGWTI WQG SGN+T GTT L I+ V ST+VVY ++PD+ + K
Sbjct: 188 GGWTIEWQGLSGNSTIGTTFLEAIKLAVSSSTKVVYKKNPDADYVKGK 331
Score = 163 bits (350), Expect(2) = 3e-059
Identities = 75/120 (62%), Positives = 82/120 (68%)
Frame = -2 / -3
Query: 2238 VVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATS 2059
V +PKP G GS*C SPTFMGSWST LNHV GSFP NP*SP TS TP PS PGSHAAT
Sbjct: 702 VDNPKPKGNKGS*CLSPTFMGSWSTLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATK 523
Query: 2058 ASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
AS + R G TSGLP+++ T H P T I P G+V+ RLSP SA G SP TTIA
Sbjct: 522 ASTNGR*GLITSGLPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA*GASPITTIA 343
Score = 92.3 bits (195), Expect(2) = 3e-059
Identities = 42/68 (61%), Positives = 45/68 (66%)
Frame = -2 / -3
Query: 1749 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 1570
CH IVHPPH PR A +P TRIL AF +GS G D PFF TRDFLTAS A+S CS
Sbjct: 210 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFVDFPFFNNTRDFLTASLANSLCSL 31
Query: 1569 FPSSPARL 1546
PS ARL
Sbjct: 30 LPSWLARL 7
>gb|DT631864.1|DT631864 EST1146795 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFD63 3' end, mRNA sequence
Length = 822
Score = 338 bits (732), Expect(2) = e-105
Identities = 137/186 (73%), Positives = 155/186 (83%)
Frame = +2 / +2
Query: 449 AEYLKYKDPKQPVAVRIKDLLGRMTLAEKIGQMTQIERENATADALAKYFIGSVLSGGGS 628
++YLKYKDP QP+ R++DLL RMTLAEKIGQMTQIER ATAD + Y+IGSVLSGGGS
Sbjct: 146 SKYLKYKDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGS 325
Query: 629 VXXXXXXXXXXXXMVTEMQKGALSTRLGIPIIYGIDAVHGHNNVYKATIFPHNVGLGATR 808
V +V +QKGALSTRL IP++YGIDAVHGHNNVY ATIFPHNVGLGATR
Sbjct: 326 VPAPKASPDTWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATR 505
Query: 809 DPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSLTSLISG 988
DPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESYSEDPK+V+++T +ISG
Sbjct: 506 DPDLARRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISG 685
Query: 989 LQGDAP 1006
LQG AP
Sbjct: 686 LQGQAP 703
Score = 225 bits (486), Expect(2) = 6e-067
Identities = 116/184 (63%), Positives = 126/184 (68%)
Frame = -2 / -1
Query: 1005 GASPCRPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVASPIL 826
GA PCRPE+ V T FGSSL*LS*QRPH GSLQTA GA +PVALTS+AVA+PIL
Sbjct: 702 GACPCRPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVAAPIL 523
Query: 825 LTRSGSLVAPSPTL*GKIVAL*TLLCPCTASIP*MIGIPRRVERAPFCISVTMXXXXXXX 646
L +SGSLVAPSPTL*GK+VA *TLL PCTASIP ++GI RRV+RAPF T
Sbjct: 522 LAKSGSLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIHVSGD 343
Query: 645 XXXXGTLPPPLSTLPMKYXXXXXXXXXXXSICVIWPIFSARVIRPSRSLMRTATGCFGSL 466
GTLPPPLSTLPM SI VI PIFSARVIR S+S R G GSL
Sbjct: 342 ALGAGTLPPPLSTLPM**FFITSAVATDLSIWVICPIFSARVIRASKSSTRALMG*DGSL 163
Query: 465 YLRY 454
YLRY
Sbjct: 162 YLRY 151
Score = 92.7 bits (196), Expect(3) = 2e-026
Identities = 42/106 (39%), Positives = 62/106 (58%)
Frame = -1 / -3
Query: 1012 IRRSVTLQARDE*SQ*LDNLWILTVALIAASPSWISTDRYTGSKGVRXXXXXXXXXXXXX 833
+RRS+ LQ RD LDN WIL +ALIAA+PS IS + T SK V
Sbjct: 709 LRRSLPLQTRDNLCHGLDNFWILAIALIAAAPSRISANSNTRSKHVLNASSSNFQSCSSS 530
Query: 832 XXXNEVRVPGSSKPDVVRENSSFVDVVVPMHCIDTVDDRYTQTRRK 695
+++R+ GSSKP++VRE+ S +D++V M+ I+ + +T R+
Sbjct: 529 NSSSQIRISGSSKPNIVREDGSPIDIIVAMYSINPIHHGDLKTSRQ 392
Score = 68.0 bits (142), Expect(2) = e-105
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 1007 ADSAGRPYVGGSKKVAACAKHYVGDGGTHNGINENNTIID 1126
A + G P++ G VAACAKH+VGDGGT +GINENNT+I+
Sbjct: 698 APTKGIPFMAGQSNVAACAKHFVGDGGTTDGINENNTVIN 817
Score = 51.5 bits (106), Expect(2) = 6e-067
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = -2 / -1
Query: 1122 MIVLFSLIPLCVPPSPT*CFAHAATFLLPPTYGLP 1018
M VLFSL+P VPPSPT C A AATF P G+P
Sbjct: 813 MTVLFSLMPSVVPPSPTKCLAQAATFDCPAIKGIP 709
Score = 48.3 bits (99), Expect(3) = 2e-026
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 556 DLRHLADLFGESHPTQQVLDANSDGLLWVLVLEVL 452
+L HL++L +SHP QQVL + DGL WVLV ++L
Sbjct: 253 NLGHLSNLLCQSHPRQQVLHTSIDGLRWVLVFKIL 149
Score = 25.4 bits (49), Expect(3) = 2e-026
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1 / -3
Query: 1126 VDDRVVLVDSVMRSTITDIVLRARSDLLTSPNIR 1025
+DD V+L+D++ S IT VL ++ S + R
Sbjct: 817 IDDSVILIDAIGCSPITHKVLSTSCNI*LSSHKR 716
>gb|DR099434.1|DR099434 STRR1_55_C05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_55_C05_A033 5', mRNA sequence
Length = 719
Score = 227 bits (491), Expect(2) = e-100
Identities = 95/148 (64%), Positives = 116/148 (78%)
Frame = +2 / +1
Query: 1427 DLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVR 1606
+LT+QV+ I M+RI+DAV RILRVKFTMGLFE P D +LAG LG +EHR LAREAVR
Sbjct: 1 NLTSQVKGGFISMNRINDAVRRILRVKFTMGLFEQPLADPNLAGHLGSKEHRNLAREAVR 180
Query: 1607 KSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTI 1786
KSLVLLKNGKS+ P LPL K KILVAG+H ++LG QCGGWT+ WQGSSGN+T GTTI
Sbjct: 181 KSLVLLKNGKSTSEPFLPLDKNVSKILVAGTHPDNLGYQCGGWTMQWQGSSGNSTIGTTI 360
Query: 1787 LSGIEATVDPSTQVVYSESPDSGVLADK 1870
L I+ V PST+VVY ++PD+ + ++
Sbjct: 361 LEAIKLAVSPSTEVVYQQNPDANYVKEQ 444
Score = 158 bits (340), Expect(2) = e-100
Identities = 62/90 (68%), Positives = 74/90 (82%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ Y IVVVGE PYAE FGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 448 FSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLVILISGRPLVIEPYLPL 627
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGK 2140
+DA VAAWLPG++G+GV DV+FGDY F GK
Sbjct: 628 VDAFVAAWLPGTKGRGVTDVIFGDYDFEGK 717
Score = 134 bits (288), Expect(2) = 1e-059
Identities = 67/131 (51%), Positives = 72/131 (54%)
Frame = -2 / -1
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T I RI PCH IVHPPHW PR W+PATRIL F
Sbjct: 422 SGFC**TTSVEGLTANLIASRIVVPMVEFPLDPCHCIVHPPHW*PRLSGWVPATRILETF 243
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
+G G+ D PFF TRDFLTAS A CS P PAR S G S P+VN T +IL
Sbjct: 242 LSKGRKGSLVDFPFFNSTRDFLTASLAKFLCSLLPRWPARFGSARGCSKSPIVNFTLKIL 63
Query: 1488 *TASSILLMGM 1456
TAS IL M M
Sbjct: 62 RTASFILFMEM 30
Score = 117 bits (251), Expect(2) = 1e-059
Identities = 53/87 (60%), Positives = 59/87 (67%)
Frame = -2 / -1
Query: 2142 SFPVNP*SPNSTSATPCPSDPGSHAATSASMSPRYGSTTSGLPEMRTTTHLAAPHTDWIT 1963
SFP *SP TS TP P PGSHAAT AS + RYGS TSGLP+++ T H PHT I
Sbjct: 719 SFPSKS*SPKITSVTPRPFVPGSHAATKASTNGRYGSITSGLPDIKITRHFNDPHTFLIV 540
Query: 1962 LGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
P GIV+ RLSPN+SA G SPTTTI
Sbjct: 539 SPPPMGIVKLRLSPNISA*GASPTTTI 459
>gb|DR099170.1|DR099170 STRR1_53_D05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_D05_A033 5', mRNA sequence
Length = 693
Score = 228 bits (492), Expect(2) = 1e-094
Identities = 95/149 (63%), Positives = 117/149 (78%)
Frame = +2 / +2
Query: 1424 DDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAV 1603
++LT+QV+ I M+RI+DAV RILRVKFTMGLFE P D +LAG LG +EHR LAREAV
Sbjct: 2 NNLTSQVKGGFISMNRINDAVRRILRVKFTMGLFEQPLADPNLAGHLGSKEHRNLAREAV 181
Query: 1604 RKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTT 1783
RKSLVLLKNGKS+ P LPL K KILVAG+H ++LG QCGGWT+ WQGSSGN+T GTT
Sbjct: 182 RKSLVLLKNGKSTSEPFLPLDKNVSKILVAGTHPDNLGYQCGGWTMQWQGSSGNSTIGTT 361
Query: 1784 ILSGIEATVDPSTQVVYSESPDSGVLADK 1870
IL I+ V PST+VVY ++PD+ + ++
Sbjct: 362 ILEAIKLAVSPSTEVVYQQNPDANYVKEQ 448
Score = 141 bits (302), Expect(2) = 1e-094
Identities = 56/80 (70%), Positives = 66/80 (82%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ Y IVVVGE PYAE FGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 452 FSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLVILISGRPLVIEPYLPL 631
Query: 2051 MDALVAAWLPGSEGQGVADV 2110
+DA VAAWLPG+EG+GV DV
Sbjct: 632 VDAFVAAWLPGTEGRGVTDV 691
Score = 134 bits (288), Expect(2) = 3e-057
Identities = 67/131 (51%), Positives = 72/131 (54%)
Frame = -2 / -1
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T I RI PCH IVHPPHW PR W+PATRIL F
Sbjct: 426 SGFC**TTSVEGLTANLIASRIVVPMVEFPLDPCHCIVHPPHW*PRLSGWVPATRILETF 247
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
+G G+ D PFF TRDFLTAS A CS P PAR S G S P+VN T +IL
Sbjct: 246 LSKGRKGSLVDFPFFNSTRDFLTASLAKFLCSLLPRWPARFGSARGCSKSPIVNFTLKIL 67
Query: 1488 *TASSILLMGM 1456
TAS IL M M
Sbjct: 66 RTASFILFMEM 34
Score = 109 bits (233), Expect(2) = 3e-057
Identities = 48/76 (63%), Positives = 54/76 (71%)
Frame = -2 / -1
Query: 2109 TSATPCPSDPGSHAATSASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFR 1930
TS TP PS PGSHAAT AS + RYGS TSGLP+++ T H PHT I P GIV+ R
Sbjct: 690 TSVTPRPSVPGSHAATKASTNGRYGSITSGLPDIKITRHFNDPHTFLIVSPPPMGIVKLR 511
Query: 1929 LSPNVSAYGGSPTTTI 1882
LSPN+SA G SPTTTI
Sbjct: 510 LSPNISA*GASPTTTI 463
>gb|DR018410.1|DR018410 STRS1_22_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_22_G03_A034 5', mRNA sequence
Length = 747
Score = 303 bits (656), Expect(2) = 2e-094
Identities = 132/207 (63%), Positives = 153/207 (73%)
Frame = +2 / +3
Query: 1295 ISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVPFRYTEFIDDLTTQVQNKVIPMSRI 1474
+ DWEGIDRIT+PP ANYS SI VGAGIDM+M+P+ +T F+ +LT+QV+ IP+SRI
Sbjct: 99 LQDWEGIDRITSPPDANYSLSILESVGAGIDMVMLPYNFTYFMGNLTSQVKGGFIPISRI 278
Query: 1475 DDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPL 1654
+DAV RILRVKFTMGLFE P + SLA +LG +EHRELAREAVRKSLVLLKNGKS PL
Sbjct: 279 NDAVRRILRVKFTMGLFEQPLANPSLANQLGSKEHRELAREAVRKSLVLLKNGKSMNNPL 458
Query: 1655 LPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVY 1834
LPL K A KILV G+HA++LG QCGGWTI WQG SGN+T GTT L I+ V S V
Sbjct: 459 LPLNKNASKILVVGTHADNLGYQCGGWTIEWQGLSGNSTIGTTFLEAIKLAVSSSKVVYK 638
Query: 1835 SESPDSGVLADKYDYAIVVVGEPPYAE 1915
V + YAIVVVGE PYAE
Sbjct: 639 KNPDVDYVKGKGFSYAIVVVGEAPYAE 719
Score = 169 bits (363), Expect(2) = 6e-048
Identities = 87/150 (58%), Positives = 99/150 (66%)
Frame = -2 / -3
Query: 1749 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 1570
CH IVHPPH PR A +P TRIL AF +GS G D PFF TRDFLTAS A+S CS
Sbjct: 553 CHSIVHPPH**PRLSA*VPTTRILEAFLFKGSKGLFIDFPFFNNTRDFLTASLANSLCSL 374
Query: 1569 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNGTMI 1390
PS ARL G S P+VN T +IL TAS ILLMGM TC VR + V L G++
Sbjct: 373 LPSWLARLGLARGCSKSPIVNFTLKILRTASFILLMGMKPPLTCEVRLPIKYVKL*GSIT 194
Query: 1389 MSIPAPTPASIE*E*LA*GGVVIRSMPSQS 1300
MSIPAPT + I+ E*LA GG+VI S+PSQS
Sbjct: 193 MSIPAPTLSKIDKE*LASGGLVILSIPSQS 104
Score = 65.7 bits (137), Expect(2) = 2e-094
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +1
Query: 1181 GVSTVMVSYSSWNGVKMHANHFLVTDFLKNKLKFR 1285
GVST+MVSYSSWNGVKMHAN FL++ LK +L F+
Sbjct: 1 GVSTIMVSYSSWNGVKMHANRFLISHVLKKQLGFK 105
Score = 44.1 bits (90), Expect(2) = 6e-048
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 1284 LNLSLFLRKSVTRKWFACIFTPFQLE*ETMTVET 1183
L S FLR R ACIFTPFQLE*+T+ VET
Sbjct: 104 LKPSCFLRT*EMRNRLACIFTPFQLE*DTIMVET 3
>gb|CO363132.1|CO363132 RTK1_7_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_G05_A029 5', mRNA sequence
Length = 743
Score = 240 bits (519), Expect(2) = 4e-092
Identities = 94/122 (77%), Positives = 105/122 (86%)
Frame = +2 / -3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 522 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 343
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGD GF GKL RTWFKSVDQLPMNVGD HYDPLFP GFG
Sbjct: 342 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPLGFG 163
Query: 2231 LT 2236
LT
Sbjct: 162 LT 157
Score = 164 bits (353), Expect(2) = 2e-052
Identities = 74/119 (62%), Positives = 84/119 (70%)
Frame = -2 / +2
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKP G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT A
Sbjct: 158 VNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKA 337
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S++ R GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 338 SINGR*GSITSGLPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMA 514
Score = 120 bits (256), Expect(2) = 4e-092
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +2 / -3
Query: 1655 LPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVY 1834
LPL K A KILVAG+HA++LG QCGGWTITWQG SGN+T GTTIL I++TV PST+VVY
Sbjct: 741 LPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVY 562
Query: 1835 SESPDS 1852
E+PD+
Sbjct: 561 QENPDA 544
Score = 63.8 bits (133), Expect(2) = 2e-052
Identities = 34/65 (52%), Positives = 36/65 (55%)
Frame = -2 / +2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG S TT V G TV I RI PC VIVHPPH PR AW+PATRI AF
Sbjct: 548 SGFS**TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAF 727
Query: 1668 FGRGS 1654
+GS
Sbjct: 728 LFKGS 742
>gb|DR056258.1|DR056258 RTCA1_29_C09.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_C09_A029 3', mRNA sequence
Length = 714
Score = 238 bits (514), Expect(2) = 7e-090
Identities = 93/122 (76%), Positives = 104/122 (85%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 214 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 393
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGD GF GKL RTWFK VDQLPMNVGD HYDPLFP GFG
Sbjct: 394 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKRVDQLPMNVGDKHYDPLFPLGFG 573
Query: 2231 LT 2236
LT
Sbjct: 574 LT 579
Score = 164 bits (352), Expect(2) = 5e-051
Identities = 74/119 (62%), Positives = 84/119 (70%)
Frame = -2 / -2
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKP G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT A
Sbjct: 578 VNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKA 399
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S++ R GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 398 SINGR*GSITSGLPDIKITRHFTEPHTFLIVSAPPNGIVKLRLSPNVSA*GASPTRTMA 222
Score = 115 bits (245), Expect(2) = 7e-090
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2 / +1
Query: 1661 LPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSE 1840
L K A KILVAG+HA++LG QCGGWTITWQG SGN+T GTTIL I++TV PST+VVY E
Sbjct: 1 LNKNAAKILVAGTHADNLGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQE 180
Query: 1841 SPDS 1852
+PD+
Sbjct: 181 NPDA 192
Score = 59.7 bits (124), Expect(2) = 5e-051
Identities = 32/60 (53%), Positives = 33/60 (55%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG S TT V G TV I RI PC VIVHPPH PR AW+PATRI AF
Sbjct: 188 SGFS**TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAF 9
>gb|BX680507.1|BX680507 BX680507 RS Pinus pinaster cDNA clone RS44E12, mRNA sequence
Length = 611
Score = 329 bits (713), Expect = 5e-089
Identities = 138/196 (70%), Positives = 162/196 (82%)
Frame = +2 / +3
Query: 1223 VKMHANHFLVTDFLKNKLKFRGFVISDWEGIDRITTPPHANYSYSIEAGVGAGIDMIMVP 1402
+KMHANHFL++ LK KL F+GFVISDW+GIDRIT+PP ANYS S+ GV AGIDM+MVP
Sbjct: 24 MKMHANHFLISQVLKKKLGFKGFVISDWQGIDRITSPPGANYSLSVFDGVSAGIDMVMVP 203
Query: 1403 FRYTEFIDDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHR 1582
F YT FI +LT+QV++ +I M RI+DAV RILRVKFTMGLFE+P + SL +LG + HR
Sbjct: 204 FNYTYFISNLTSQVKSGLISMPRINDAVRRILRVKFTMGLFEHPMANPSLVNQLGSKAHR 383
Query: 1583 ELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSG 1762
ELAREAVRKSLVLLKNGKS PLLPL K A KILVAG+HA++LG QCGGWTITWQG SG
Sbjct: 384 ELAREAVRKSLVLLKNGKSDSKPLLPLNKNAAKILVAGTHADNLGYQCGGWTITWQGLSG 563
Query: 1763 NTTAGTTILSGIEATV 1810
N+T GTTIL I++TV
Sbjct: 564 NSTKGTTILEAIKSTV 611
Score = 202 bits (435), Expect = 1e-050
Identities = 105/195 (53%), Positives = 117/195 (60%)
Frame = -2 / -2
Query: 1809 TVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLP 1630
TV I RI PC VIVHPPH PR AW+PATRI AF +GS G D P
Sbjct: 610 TVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAFLFKGSKGLLSDFP 431
Query: 1629 FFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTL 1450
FF TRDFLTAS A+S C+ PS RL G S PMVN T +IL TAS IL M +
Sbjct: 430 FFNSTRDFLTASLANSLCALLPSWLTRLGLAMGCSKSPMVNFTLKILRTASFILGMEIKP 251
Query: 1449 F*TCVVRSSMNSVYLNGTMIMSIPAPTPASIE*E*LA*GGVVIRSMPSQSEITKPLNLSL 1270
TC VR + V L GT+ MSIPA TP+ + E*LA GG+VI S+P QSEITKPL S
Sbjct: 250 LLTCEVRLLIKYV*LKGTITMSIPALTPSKTDKE*LAPGGLVILSIPCQSEITKPLKPSF 71
Query: 1269 FLRKSVTRKWFACIF 1225
F R RKW ACIF
Sbjct: 70 FFRT*EMRKWLACIF 26
>gb|DR056330.1|DR056330 RTCA1_29_C09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_C09_A029 5', mRNA sequence
Length = 604
Score = 326 bits (707), Expect = 3e-088
Identities = 132/181 (72%), Positives = 151/181 (83%)
Frame = +2 / +2
Query: 449 AEYLKYKDPKQPVAVRIKDLLGRMTLAEKIGQMTQIERENATADALAKYFIGSVLSGGGS 628
++YLKY+DP QP+ R++DLL RMTLAEKIGQMTQIER ATAD + Y+IGSVLSGGGS
Sbjct: 62 SKYLKYEDPSQPINARVEDLLARMTLAEKIGQMTQIERSVATADVMKNYYIGSVLSGGGS 241
Query: 629 VXXXXXXXXXXXXMVTEMQKGALSTRLGIPIIYGIDAVHGHNNVYKATIFPHNVGLGATR 808
V +V +QKGALSTRL IP++YGIDAVHGHNNVY ATIFPHNVGLGATR
Sbjct: 242 VPAPKASPATWINLVDGLQKGALSTRLQIPMMYGIDAVHGHNNVYGATIFPHNVGLGATR 421
Query: 809 DPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSLTSLISG 988
DPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESYSEDPK+V+++T +ISG
Sbjct: 422 DPDLARRIGAATALEVRATGIQYVFAPCVAVCRDPRWGRCYESYSEDPKIVKAMTKIISG 601
Query: 989 L 991
L
Sbjct: 602 L 604
Score = 211 bits (455), Expect = 2e-053
Identities = 111/179 (62%), Positives = 121/179 (67%)
Frame = -2 / -2
Query: 990 RPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVASPILLTRSG 811
RPE+ V T FGSSL*LS*QRPH GSLQTA GA +PVALTS+AVA+PILL +SG
Sbjct: 603 RPEIIFVMALTIFGSSL*LS*QRPHRGSLQTATHGANTY*MPVALTSKAVAAPILLAKSG 424
Query: 810 SLVAPSPTL*GKIVAL*TLLCPCTASIP*MIGIPRRVERAPFCISVTMXXXXXXXXXXXG 631
SLVAPSPTL*GK+VA *TLL PCTASIP ++GI RRV+RAPF T G
Sbjct: 423 SLVAPSPTL*GKMVAP*TLLWPCTASIPYIMGI*RRVDRAPFWSPSTKLIHVAGDALGAG 244
Query: 630 TLPPPLSTLPMKYXXXXXXXXXXXSICVIWPIFSARVIRPSRSLMRTATGCFGSLYLRY 454
TLPPPLSTLPM SI VI PIFSARVIR S+S R G GS YLRY
Sbjct: 243 TLPPPLSTLPM**FFITSAVATDLSIWVICPIFSARVIRASKSSTRALMG*DGSSYLRY 67
Score = 86.3 bits (182), Expect(2) = 3e-023
Identities = 39/99 (39%), Positives = 56/99 (56%)
Frame = -1 / -1
Query: 991 QARDE*SQ*LDNLWILTVALIAASPSWISTDRYTGSKGVRXXXXXXXXXXXXXXXXNEVR 812
Q RD LDN WIL +ALIAA+PS IS + T SK V +++R
Sbjct: 604 QTRDNLCHGLDNFWILAIALIAAAPSRISANSNTRSKHVLNASSSNFQSCSSSNSSSQIR 425
Query: 811 VPGSSKPDVVRENSSFVDVVVPMHCIDTVDDRYTQTRRK 695
+ GSSKP++VRE+ S +D++V MH I+ + +T R+
Sbjct: 424 ISGSSKPNIVREDGSPIDIIVAMHSINPIHHGDLKTSRQ 308
Score = 48.3 bits (99), Expect(2) = 3e-023
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -1 / -1
Query: 556 DLRHLADLFGESHPTQQVLDANSDGLLWVLVLEVL 452
+L HL++L +SHP QQVL + DGL WVLV ++L
Sbjct: 169 NLGHLSNLLCQSHPRQQVLHTSIDGLRWVLVFKIL 65
>gb|DR013884.1|DR013884 HEAT1_22_D06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_22_D06_A029 3', mRNA sequence
Length = 658
Score = 323 bits (699), Expect = 4e-087
Identities = 132/192 (68%), Positives = 152/192 (79%)
Frame = +2 / -3
Query: 416 VLMFCLLALGRAEYLKYKDPKQPVAVRIKDLLGRMTLAEKIGQMTQIERENATADALAKY 595
V++ C A +YKDP QP+ R+KDLL RMTL EKIGQMTQIER +ATAD + Y
Sbjct: 578 VVILCKCAGAIGYASRYKDPSQPIDARVKDLLARMTLEEKIGQMTQIERTDATADVMKHY 399
Query: 596 FIGSVLSGGGSVXXXXXXXXXXXXMVTEMQKGALSTRLGIPIIYGIDAVHGHNNVYKATI 775
+IGSVLSGGGSV MV E+QKGA+STRL IP+IYGIDAVHGHNNV+ ATI
Sbjct: 398 YIGSVLSGGGSVPAPKASPATWINMVDELQKGAMSTRLQIPMIYGIDAVHGHNNVFGATI 219
Query: 776 FPHNVGLGATRDPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPK 955
FPHN+GLGATRDPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESYSEDPK
Sbjct: 218 FPHNIGLGATRDPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESYSEDPK 39
Query: 956 VVQSLTSLISGL 991
+V+++T +I GL
Sbjct: 38 IVKAMTEIIVGL 3
Score = 206 bits (445), Expect = 5e-052
Identities = 108/178 (60%), Positives = 120/178 (67%)
Frame = -2 / +1
Query: 993 CRPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVASPILLTRS 814
CRP + V T FGSSL*LS*QRPH GSLQTA GA +PVA TS+AVA+PILL RS
Sbjct: 1 CRPTIISVMALTIFGSSL*LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAAPILLARS 180
Query: 813 GSLVAPSPTL*GKIVAL*TLLCPCTASIP*MIGIPRRVERAPFCISVTMXXXXXXXXXXX 634
GSLVAPSP L*GK+VA TLL PCTAS+P +IGI RRV+ APF S TM
Sbjct: 181 GSLVAPSPIL*GKMVAPNTLL*PCTASMPYIIGI*RRVDMAPFWSSSTMLIHVAGDALGA 360
Query: 633 GTLPPPLSTLPMKYXXXXXXXXXXXSICVIWPIFSARVIRPSRSLMRTATGCFGSLYL 460
GTLPPPLSTLPM SI VI PIFS+RVIR ++SL R + G GSLYL
Sbjct: 361 GTLPPPLSTLPM**CFITSAVASVLSIWVICPIFSSRVIRANKSLTRASMG*DGSLYL 534
Score = 87.7 bits (185), Expect(2) = 2e-024
Identities = 41/96 (42%), Positives = 56/96 (58%)
Frame = -1 / +3
Query: 991 QARDE*SQ*LDNLWILTVALIAASPSWISTDRYTGSKGVRXXXXXXXXXXXXXXXXNEVR 812
QA D S LDN WILTVALIAA+PS IS + T SK V +++R
Sbjct: 3 QANDNLSHGLDNFWILTVALIAAAPSRISANSNTWSKCVLNASSSNFQSRSSPYSSSQIR 182
Query: 811 VPGSSKPDVVRENSSFVDVVVPMHCIDTVDDRYTQT 704
+PGSSKP+++RE+ S ++V MH I+ + R +T
Sbjct: 183 IPGSSKPNIMREDGSPKHIIVTMHSINAIYHRNLKT 290
Score = 46.9 bits (96), Expect(2) = 2e-024
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -1 / +3
Query: 613 QHATYEVFGQRVGRGVFPLDLRHLADLFGESHPTQQVLDANSDGLLWVLV 464
Q+ V + G+ +L HL++L +SHP QQVL+ + +GL WVLV
Sbjct: 381 QYTPNVVMFHNICSGICSFNLGHLSNLLFQSHPCQQVLNTSINGLRWVLV 530
>gb|CO162180.1|CO162180 FLD1_33_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_D11_A029 5', mRNA sequence
Length = 846
Score = 238 bits (514), Expect(2) = 4e-084
Identities = 93/121 (76%), Positives = 104/121 (85%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 193 FSYAIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPL 372
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGDY F GKL RTWFKSVDQLPMN+GD HYDPLFP GFG
Sbjct: 373 VDAFVAAWLPGTEGQGVTDVIFGDYRFQGKLARTWFKSVDQLPMNIGDQHYDPLFPLGFG 552
Query: 2231 L 2233
L
Sbjct: 553 L 555
Score = 155 bits (334), Expect(2) = 2e-046
Identities = 72/121 (59%), Positives = 81/121 (66%)
Frame = -2 / -2
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L +PKP G GS*C SP F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 563 LQTNPKPKGNRGS*CWSPMFIGS*STLLNHVLASLP*KR*SPKITSVTPWPSVPGSHAAT 384
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + R GS TSGLP+++ T H P T I P G+V+ RLSPNVSAYG SPTTT+
Sbjct: 383 KASTNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTM 204
Query: 1881 A 1879
A
Sbjct: 203 A 201
Score = 95.9 bits (203), Expect(2) = 4e-084
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 1682 ILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
+LVAG+H ++LG QCGGWT+ WQG SGN T GTTIL I+ V PST+VVY ++PD+
Sbjct: 1 VLVAGTHPDNLGYQCGGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDA 171
Score = 52.4 bits (108), Expect(2) = 2e-046
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATR 1684
SG TT V G T + I RI PCH IVHPPH PR W+PATR
Sbjct: 167 SGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATR 3
>gb|CF671009.1|CF671009 RTCNT1_54_C10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_54_C10_A029 3', mRNA sequence
Length = 692
Score = 240 bits (519), Expect(2) = 3e-082
Identities = 94/122 (77%), Positives = 105/122 (86%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 154 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 333
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGD GF GKL RTWFKSVDQLPMNVGD HYDPLFP GFG
Sbjct: 334 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPLGFG 513
Query: 2231 LT 2236
LT
Sbjct: 514 LT 519
Score = 164 bits (353), Expect(2) = 2e-044
Identities = 74/119 (62%), Positives = 84/119 (70%)
Frame = -2 / -1
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKP G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT A
Sbjct: 518 VNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKA 339
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S++ R GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 338 SINGR*GSITSGLPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMA 162
Score = 87.2 bits (184), Expect(2) = 3e-082
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2 / +1
Query: 1721 QCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
QCGGWTITWQG SGN+T GTTIL I++TV PST+VVY E+PD+
Sbjct: 1 QCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDA 132
Score = 36.8 bits (74), Expect(2) = 2e-044
Identities = 21/42 (50%), Positives = 21/42 (50%)
Frame = -2 / -1
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPH 1723
SG S TT V G TV I RI PC VIVHPPH
Sbjct: 128 SGFS**TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH 3
>gb|DR055806.1|DR055806 RTCA1_26_B12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_B12_A029 3', mRNA sequence
Length = 623
Score = 243 bits (524), Expect(2) = 1e-076
Identities = 96/127 (75%), Positives = 106/127 (83%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAET GDNLNLTIP G I +VCG+ KC+V+L+SGRPLV+ PYL
Sbjct: 134 FSYAIVVVGEAPYAETAGDNLNLTIPLGGGDTINNVCGSVKCLVILVSGRPLVITPYLPL 313
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
++A VAAWLPGSEGQGV DV+FGDYGF GKL RTWFKSVDQLPMNVGD HYDPLFPFGFG
Sbjct: 314 VEAFVAAWLPGSEGQGVTDVIFGDYGFQGKLSRTWFKSVDQLPMNVGDKHYDPLFPFGFG 493
Query: 2231 LTTKGTK 2251
LTT K
Sbjct: 494 LTTTVAK 514
Score = 164 bits (353), Expect = 2e-039
Identities = 75/121 (61%), Positives = 84/121 (69%)
Frame = -2 / -3
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
+VV+PKP G GS*C SPTF+GS ST LNHV SFP P*SP TS TP PSDPGSHAAT
Sbjct: 504 VVVNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAAT 325
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + R G TSGLP+ + T H PHT I P G+V+ RLSP VSA G SPTTT+
Sbjct: 324 KASTNGR*GVITSGLPDTKITRHFTEPHTLLIVSPPPKGMVKLRLSPAVSA*GASPTTTM 145
Query: 1881 A 1879
A
Sbjct: 144 A 142
Score = 66.1 bits (138), Expect(2) = 1e-076
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +2 / +2
Query: 1742 TWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
TWQG SGNTT GTTIL I++ V PST+VVY E+PD+
Sbjct: 2 TWQGLSGNTTKGTTILEAIQSAVSPSTEVVYQENPDA 112
>gb|DR018345.1|DR018345 STRS1_22_G03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_22_G03_A034 3', mRNA sequence
Length = 755
Score = 281 bits (608), Expect = 2e-074
Identities = 114/169 (67%), Positives = 128/169 (75%)
Frame = +2 / +3
Query: 1733 WTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVLADKYDYAIVVVGEPPYA 1912
WTI WQG SGN+T GTT L I+ V S V V + YAIVVVGE PYA
Sbjct: 3 WTIEWQGLSGNSTIGTTFLEAIKLAVSSSKVVYKKNPDVDYVKGKGFSYAIVVVGEAPYA 182
Query: 1913 ETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDALVAAWLPGSEG 2092
E +GDNLNLTIP G I++VCG+ KC+V+LISGRPLV++PYL +DA VAAWLPG+EG
Sbjct: 183 EYYGDNLNLTIPLSGGDTIKNVCGSLKCLVILISGRPLVIKPYLPLVDAFVAAWLPGTEG 362
Query: 2093 QGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFGLTT 2239
QGV DV+FGDYGF GKLPRTWFKSVDQLPMNVGD HYDPLFP GFGLTT
Sbjct: 363 QGVTDVIFGDYGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFGLTT 509
Score = 169 bits (363), Expect = 1e-040
Identities = 77/120 (64%), Positives = 84/120 (70%)
Frame = -2 / -2
Query: 2238 VVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATS 2059
VV+PKP G GS*C SPTFMGSWST LNHV GSFP NP*SP TS TP PS PGSHAAT
Sbjct: 508 VVNPKPKGNKGS*CLSPTFMGSWSTLLNHVLGSFP*NP*SPKITSVTPWPSVPGSHAATK 329
Query: 2058 ASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
AS + R G TSGLP+++ T H P T I P G+V+ RLSP SA G SPTTTIA
Sbjct: 328 ASTNGR*GLITSGLPDIKITRHFKDPQTFLIVSPPLKGMVKLRLSP*YSA*GASPTTTIA 149
>gb|DR169238.1|DR169238 RTPHOS1_31_B02.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_31_B02_A029 3', mRNA sequence
Length = 666
Score = 240 bits (519), Expect(2) = 1e-073
Identities = 94/122 (77%), Positives = 105/122 (86%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIV+VGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 129 FSYAIVLVGEAPYAETFGDNLNLTIPLGGADTIKNVCGSVKCLVILISGRPLVIEPYLPL 308
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EGQGV DV+FGD GF GKL RTWFKSVDQLPMNVGD HYDPLFP GFG
Sbjct: 309 IDAFVAAWLPGTEGQGVTDVIFGDQGFRGKLSRTWFKSVDQLPMNVGDKHYDPLFPLGFG 488
Query: 2231 LT 2236
LT
Sbjct: 489 LT 494
Score = 164 bits (353), Expect = 2e-039
Identities = 74/119 (62%), Positives = 84/119 (70%)
Frame = -2 / -3
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKP G GS*C SPTF+GS ST LNHV SFP+ P*SP TS TP PS PGS AAT A
Sbjct: 493 VNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPLKP*SPKITSVTPWPSVPGSQAATKA 314
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S++ R GS TSGLP+++ T H PHT I P GIV+ RLSPNVSA G SPT T+A
Sbjct: 313 SINGR*GSITSGLPDIKITRHFTEPHTFLIVSAPPKGIVKLRLSPNVSA*GASPTRTMA 137
Score = 58.8 bits (122), Expect(2) = 1e-073
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2 / +3
Query: 1748 QGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
QG SGN+T GTTIL I++TV PST+VVY E+PD+
Sbjct: 3 QGLSGNSTKGTTILEAIKSTVSPSTEVVYQENPDA 107
>dbj|BD224350.1| Materials and methods for the modification of plant lignin content
Length = 545
Score = 172 bits (370), Expect(2) = 1e-068
Identities = 70/102 (68%), Positives = 83/102 (81%)
Frame = +2 / +3
Query: 1547 SLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQC 1726
SLA +LG +EHRELAREAVRKSLVLLKNGKS+ PLLPL K A K+LVAG+H ++LG QC
Sbjct: 27 SLANQLGSKEHRELAREAVRKSLVLLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGYQC 206
Query: 1727 GGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
GGWT+ WQG SGN T GTTIL I+ V PST+VVY ++PD+
Sbjct: 207 GGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDA 332
Score = 110 bits (235), Expect(2) = 1e-068
Identities = 44/62 (70%), Positives = 52/62 (83%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 354 FSYAIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPL 533
Query: 2051 MD 2056
+D
Sbjct: 534 VD 539
Score = 110 bits (234), Expect(2) = 1e-039
Identities = 53/101 (52%), Positives = 58/101 (57%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T + I RI PCH IVHPPH PR W+PATR L AF
Sbjct: 328 SGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATRTLEAF 149
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARL 1546
F +GS G D PFF T+DFLTAS A+S CS PS ARL
Sbjct: 148 FSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARL 26
Score = 75.3 bits (158), Expect(2) = 1e-039
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = -2 / -2
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S + R GS TSGLP+++ T H P T I P G+V+ RLSPNVSAYG SPTTT+A
Sbjct: 538 STNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMA 362
>dbj|BD224413.1| Materials and methods for the modification of plant lignin content
Length = 528
Score = 172 bits (370), Expect(2) = 1e-068
Identities = 70/102 (68%), Positives = 83/102 (81%)
Frame = +2 / +1
Query: 1547 SLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQC 1726
SLA +LG +EHRELAREAVRKSLVLLKNGKS+ PLLPL K A K+LVAG+H ++LG QC
Sbjct: 10 SLANQLGSKEHRELAREAVRKSLVLLKNGKSANKPLLPLEKNASKVLVAGTHPDNLGYQC 189
Query: 1727 GGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
GGWT+ WQG SGN T GTTIL I+ V PST+VVY ++PD+
Sbjct: 190 GGWTMEWQGLSGNITVGTTILEAIKLAVSPSTEVVYEQNPDA 315
Score = 110 bits (235), Expect(2) = 1e-068
Identities = 44/62 (70%), Positives = 52/62 (83%)
Frame = +2 / +1
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 337 FSYAIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPL 516
Query: 2051 MD 2056
+D
Sbjct: 517 VD 522
Score = 110 bits (234), Expect(2) = 1e-039
Identities = 53/101 (52%), Positives = 58/101 (57%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V G T + I RI PCH IVHPPH PR W+PATR L AF
Sbjct: 311 SGFCS*TTSVEGLTASLIASRIVVPTVMFPLNPCHSIVHPPH**PRLSGWVPATRTLEAF 132
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARL 1546
F +GS G D PFF T+DFLTAS A+S CS PS ARL
Sbjct: 131 FSKGSKGLLADFPFFNNTKDFLTASLANSLCSLLPSWLARL 9
Score = 75.3 bits (158), Expect(2) = 1e-039
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = -2 / -2
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
S + R GS TSGLP+++ T H P T I P G+V+ RLSPNVSAYG SPTTT+A
Sbjct: 521 STNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTMA 345
>gb|DR100370.1|DR100370 STRR1_63_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_D08_A033 5', mRNA sequence
Length = 467
Score = 199 bits (429), Expect(2) = 6e-068
Identities = 79/106 (74%), Positives = 89/106 (83%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAET GDNLNLTIP G I +VCG+ KC+V+L+SGRPLV+ PYL
Sbjct: 150 FSYAIVVVGEAPYAETAGDNLNLTIPLGGGDTINNVCGSVKCLVILVSGRPLVITPYLPL 329
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNV 2188
++A VAAWLPGSEGQGV DV+FGDYGF GKL RTWFKSVDQLPMNV
Sbjct: 330 VEAFVAAWLPGSEGQGVTDVIFGDYGFQGKLSRTWFKSVDQLPMNV 467
Score = 135 bits (289), Expect(2) = 6e-035
Identities = 63/103 (61%), Positives = 70/103 (67%)
Frame = -2 / -2
Query: 2187 TFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSASMSPRYGSTTSGLPEM 2008
TF+GS ST LNHV SFP P*SP TS TP PSDPGSHAAT AS + R G TSGLP+
Sbjct: 466 TFIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAATKASTNGR*GVITSGLPDT 287
Query: 2007 RTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTIA 1879
+ T H PHT I P G+V+ RLSP VSA G SPTTT+A
Sbjct: 286 KITRHFTEPHTLLIVSPPPKGMVKLRLSPAVSA*GASPTTTMA 158
Score = 80.8 bits (170), Expect(2) = 6e-068
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2 / +3
Query: 1727 GGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDS 1852
GGWTITWQG SGNTT GTTIL I++ V PST+VVY E+PD+
Sbjct: 3 GGWTITWQGLSGNTTKGTTILEAIQSAVSPSTEVVYQENPDA 128
Score = 34.5 bits (69), Expect(2) = 6e-035
Identities = 20/41 (48%), Positives = 20/41 (48%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPP 1726
SG S TT V G T I RI PCHVIVHPP
Sbjct: 124 SGFS**TTSVEGLTADWIASRIVVPLVVFPLNPCHVIVHPP 2
>gb|AW754572.1|AW754572 PC03H01 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC03H01, mRNA sequence
Length = 505
Score = 243 bits (525), Expect = 4e-063
Identities = 96/127 (75%), Positives = 106/127 (83%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ YAIVVVGE PYAET GDNLNLTIP G I +VCG+ KC+V+L+SGRPLV+ PYL
Sbjct: 9 FSYAIVVVGEAPYAETAGDNLNLTIPLGGDDTINNVCGSVKCLVILVSGRPLVITPYLPL 188
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
++A VAAWLPGSEGQGV DV+FGDYGF GKL RTWFKSVDQLPMNVGD HYDPLFPFGFG
Sbjct: 189 VEAFVAAWLPGSEGQGVTDVIFGDYGFQGKLSRTWFKSVDQLPMNVGDKHYDPLFPFGFG 368
Query: 2231 LTTKGTK 2251
LTT K
Sbjct: 369 LTTTVAK 389
Score = 165 bits (355), Expect = 1e-039
Identities = 75/121 (61%), Positives = 84/121 (69%)
Frame = -2 / -1
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
+VV+PKP G GS*C SPTF+GS ST LNHV SFP P*SP TS TP PSDPGSHAAT
Sbjct: 379 VVVNPKPKGNRGS*CLSPTFIGS*STLLNHVLESFPWKP*SPKITSVTPWPSDPGSHAAT 200
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + R G TSGLP+ + T H PHT I P G+V+ RLSP VSA G SPTTT+
Sbjct: 199 KASTNGR*GVITSGLPDTKITRHFTEPHTLLIVSSPPKGMVKLRLSPAVSA*GASPTTTM 20
Query: 1881 A 1879
A
Sbjct: 19 A 17
>gb|DR099363.1|DR099363 STRR1_55_C05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_55_C05_A033 3', mRNA sequence
Length = 665
Score = 231 bits (499), Expect = 2e-059
Identities = 90/123 (73%), Positives = 103/123 (83%)
Frame = +2 / +2
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ Y IVVVGE PYAE FGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 44 FSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLVILISGRPLVIEPYLPL 223
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EG+GV DV+FGDY F GKLPRTWF++VDQLPMNVGD Y PLFP GFG
Sbjct: 224 VDAFVAAWLPGTEGRGVTDVIFGDYDFEGKLPRTWFRNVDQLPMNVGDKRYHPLFPLGFG 403
Query: 2231 LTT 2239
LTT
Sbjct: 404 LTT 412
Score = 170 bits (365), Expect = 5e-041
Identities = 78/119 (65%), Positives = 85/119 (71%)
Frame = -2 / -3
Query: 2238 VVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATS 2059
VV+PKPNGK G * SPTFMGS ST LNHV GSFP *SP TS TP PS PGSHAAT
Sbjct: 411 VVNPKPNGKRG**RLSPTFMGS*STFLNHVLGSFPSKS*SPKITSVTPRPSVPGSHAATK 232
Query: 2058 ASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + RYGS TSGLP+++ T H PHT I P GIV+ RLSPN+SA G SPTTTI
Sbjct: 231 ASTNGRYGSITSGLPDIKITRHFNDPHTFLIVSPPPMGIVKLRLSPNISA*GASPTTTI 55
>gb|BE431385.1|BE431385 NXNV_181_F03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_181_F03 5' similar to Arabidopsis thaliana sequence
At5g20950 beta-D-glucan exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 456
Score = 229 bits (495), Expect = 6e-059
Identities = 95/148 (64%), Positives = 115/148 (77%)
Frame = +2 / +2
Query: 1133 GLLSIHMPPYYNSIIRGVSTVMVSYSSWNGVKMHANHFLVTDFLKNKLKFRGFVISDWEG 1312
GL +IHM PY+++I +GVST+MVSYSSWNG KMHANHFLV+ LK +L F+GFVISDW+G
Sbjct: 11 GLFNIHMTPYFDAIAKGVSTIMVSYSSWNGQKMHANHFLVSQVLKKQLGFKGFVISDWQG 190
Query: 1313 IDRITTPPHANYSYSIEAGVGAGIDMIMVPFRYTEFIDDLTTQVQNKVIPMSRIDDAVYR 1492
IDRIT+PP ANYS S+ GVGAGIDM+M P +T+FI DLT+QV+ I MS I+DAV R
Sbjct: 191 IDRITSPPDANYSLSVLDGVGAGIDMVMXPDNFTDFISDLTSQVKGGFISMSXINDAVQR 370
Query: 1493 ILRVKFTMGLFENPYPDSSLAGELGKQE 1576
ILRVKFTMGL D SL +L +E
Sbjct: 371 ILRVKFTMGLXXXXMADXSLXXQLXSKE 454
Score = 163 bits (351), Expect = 4e-039
Identities = 84/148 (56%), Positives = 97/148 (65%)
Frame = -2 / -1
Query: 1575 SCFPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNGT 1396
S S RL S PMVN T +IL*TAS I LM M TC VRS + SV L+G
Sbjct: 453 SLLXSWXXRLXSAIXCXXSPMVNFTLKIL*TASFIXLMEMXPPLTCEVRSLIKSVKLSGX 274
Query: 1395 MIMSIPAPTPASIE*E*LA*GGVVIRSMPSQSEITKPLNLSLFLRKSVTRKWFACIFTPF 1216
+ MSIPAPTP+ + E*LA GG+VI S+P QSEITKPL S F R TRKW ACIF PF
Sbjct: 273 ITMSIPAPTPSKTDKE*LASGGLVILSIPCQSEITKPLKPSCFFRT*ETRKWLACIFCPF 94
Query: 1215 QLE*ETMTVETPRMIEL**GGIWMLSSP 1132
QLE*ET+ VETP + *G +WML++P
Sbjct: 93 QLE*ETIMVETPLAMASK*GVMWMLNNP 10
>gb|DR099098.1|DR099098 STRR1_53_D05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_D05_A033 3', mRNA sequence
Length = 672
Score = 229 bits (494), Expect = 8e-059
Identities = 89/122 (72%), Positives = 102/122 (83%)
Frame = +2 / +3
Query: 1871 YDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGD 2050
+ Y IVVVGE PYAE FGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL
Sbjct: 51 FSYGIVVVGEAPYAEMFGDNLNLTIPMGGGDTIKNVCGSLKCLVILISGRPLVIEPYLPL 230
Query: 2051 MDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
+DA VAAWLPG+EG+GV DV+FGDY F GKLPRTWF++VDQLPMNVGD Y PLFP GFG
Sbjct: 231 VDAFVAAWLPGTEGRGVTDVIFGDYDFEGKLPRTWFRNVDQLPMNVGDKRYHPLFPLGFG 410
Query: 2231 LT 2236
LT
Sbjct: 411 LT 416
Score = 168 bits (361), Expect = 2e-040
Identities = 77/118 (65%), Positives = 84/118 (71%)
Frame = -2 / -3
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKPNGK G * SPTFMGS ST LNHV GSFP *SP TS TP PS PGSHAAT A
Sbjct: 415 VNPKPNGKRG**RLSPTFMGS*STFLNHVLGSFPSKS*SPKITSVTPRPSVPGSHAATKA 236
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
S + RYGS TSGLP+++ T H PHT I P GIV+ RLSPN+SA G SPTTTI
Sbjct: 235 STNGRYGSITSGLPDIKITRHFNDPHTFLIVSPPPMGIVKLRLSPNISA*GASPTTTI 62
>gb|AW290744.1|AW290744 NXNV046D07F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D07 5', mRNA sequence
Length = 391
Score = 222 bits (479), Expect = 1e-056
Identities = 88/117 (75%), Positives = 98/117 (83%)
Frame = +2 / +3
Query: 1880 AIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDA 2059
AIVVVGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL +DA
Sbjct: 3 AIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDA 182
Query: 2060 LVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
VAAWLPG+EGQGV DV+FGDY F GKL RTWFKSVDQLPMN+ D HY LFP GFG
Sbjct: 183 FVAAWLPGTEGQGVTDVIFGDYRFXGKLARTWFKSVDQLPMNIXDXHYXXLFPLGFG 353
Score = 150 bits (323), Expect = 3e-035
Identities = 70/121 (57%), Positives = 78/121 (64%)
Frame = -2 / -1
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L PKP G S*C S F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 364 LQTXPKPKGNRXS*CXSXMFIGS*STLLNHVLASLPXKR*SPKITSVTPWPSVPGSHAAT 185
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + R GS TSGLP+++ T H P T I P G+V+ RLSPNVSAYG SPTTT+
Sbjct: 184 KASTNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTM 5
Query: 1881 A 1879
A
Sbjct: 4 A 2
>gb|CD027404.1|CD027404 NXNV046D07 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D07 5' similar to Arabidopsis thaliana sequence
At5g20950 beta-D-glucan exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 391
Score = 222 bits (479), Expect = 1e-056
Identities = 88/117 (75%), Positives = 98/117 (83%)
Frame = +2 / +3
Query: 1880 AIVVVGEPPYAETFGDNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDA 2059
AIVVVGE PYAETFGDNLNLTIP G I++VCG+ KC+V+LISGRPLV+EPYL +DA
Sbjct: 3 AIVVVGEAPYAETFGDNLNLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDA 182
Query: 2060 LVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFG 2230
VAAWLPG+EGQGV DV+FGDY F GKL RTWFKSVDQLPMN+ D HY LFP GFG
Sbjct: 183 FVAAWLPGTEGQGVTDVIFGDYRFXGKLARTWFKSVDQLPMNIXDXHYXXLFPLGFG 353
Score = 150 bits (323), Expect = 3e-035
Identities = 70/121 (57%), Positives = 78/121 (64%)
Frame = -2 / -1
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L PKP G S*C S F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 364 LQTXPKPKGNRXS*CXSXMFIGS*STLLNHVLASLPXKR*SPKITSVTPWPSVPGSHAAT 185
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLSPNVSAYGGSPTTTI 1882
AS + R GS TSGLP+++ T H P T I P G+V+ RLSPNVSAYG SPTTT+
Sbjct: 184 KASTNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVKLRLSPNVSAYGASPTTTM 5
Query: 1881 A 1879
A
Sbjct: 4 A 2
>dbj|BD224352.1| Materials and methods for the modification of plant lignin content
Length = 435
Score = 176 bits (378), Expect(2) = 4e-056
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2 / +2
Query: 761 YKATIFPHNVGLGATRDPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESY 940
++ATIFPHN+GLGATRDPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESY
Sbjct: 26 HEATIFPHNIGLGATRDPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESY 205
Query: 941 SEDPKVVQSLTSLISGLQGDAPADS 1015
SEDPK+V+++T +I GLQG+ PA+S
Sbjct: 206 SEDPKIVKAMTEIIVGLQGNPPANS 280
Score = 120 bits (256), Expect(2) = 1e-033
Identities = 58/83 (69%), Positives = 63/83 (75%)
Frame = -2 / -1
Query: 1014 ESAGASPCRPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVAS 835
E AG PCRP + V T FGSSL*LS*QRPH GSLQTA GA +PVA TS+AVA+
Sbjct: 279 ELAGGFPCRPTIISVMALTIFGSSL*LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAA 100
Query: 834 PILLTRSGSLVAPSPTL*GKIVA 766
PILL RSGSLVAPSP L*GK+VA
Sbjct: 99 PILLARSGSLVAPSPIL*GKMVA 31
Score = 64.8 bits (135), Expect(2) = 4e-056
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +2 / +2
Query: 1019 GRPYVGGSKKVAACAKHYVGDGGTHNGINENNTIIDTHGL 1138
G P++ G VAACAKH+VG GGT GI+ENNT+I+ GL
Sbjct: 287 GGPFIAGQSNVAACAKHFVGYGGTTKGIDENNTVINYQGL 406
Score = 45.1 bits (92), Expect(2) = 1e-033
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 1116 VLFSLIPLCVPPSPT*CFAHAATFLLPPTYGLP 1018
VLFS IPL VPP PT C A AATF P G P
Sbjct: 384 VLFSSIPLVVPP*PTKCLAQAATFDCPAIKGPP 286
>dbj|BD224415.1| Materials and methods for the modification of plant lignin content
Length = 404
Score = 174 bits (375), Expect(2) = 1e-055
Identities = 66/83 (79%), Positives = 76/83 (91%)
Frame = +2 / +1
Query: 767 ATIFPHNVGLGATRDPDLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSE 946
ATIFPHN+GLGATRDPDL +RIG ATALEVRATGI Y FAPC+AVCRDPRWGRCYESYSE
Sbjct: 1 ATIFPHNIGLGATRDPDLARRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCYESYSE 180
Query: 947 DPKVVQSLTSLISGLQGDAPADS 1015
DPK+V+++T +I GLQG+ PA+S
Sbjct: 181 DPKIVKAMTEIIVGLQGNPPANS 249
Score = 118 bits (252), Expect(2) = 5e-033
Identities = 57/82 (69%), Positives = 62/82 (75%)
Frame = -2 / -1
Query: 1014 ESAGASPCRPEMSEVSDWTTFGSSL*LS*QRPHLGSLQTAIQGAKA*GIPVALTSRAVAS 835
E AG PCRP + V T FGSSL*LS*QRPH GSLQTA GA +PVA TS+AVA+
Sbjct: 248 ELAGGFPCRPTIISVMALTIFGSSL*LS*QRPHRGSLQTATHGANVY*MPVARTSKAVAA 69
Query: 834 PILLTRSGSLVAPSPTL*GKIV 769
PILL RSGSLVAPSP L*GK+V
Sbjct: 68 PILLARSGSLVAPSPIL*GKMV 3
Score = 64.8 bits (135), Expect(2) = 1e-055
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +2 / +1
Query: 1019 GRPYVGGSKKVAACAKHYVGDGGTHNGINENNTIIDTHGL 1138
G P++ G VAACAKH+VG GGT GI+ENNT+I+ GL
Sbjct: 256 GGPFIAGQSNVAACAKHFVGYGGTTKGIDENNTVINYQGL 375
Score = 45.1 bits (92), Expect(2) = 5e-033
Identities = 21/33 (63%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 1116 VLFSLIPLCVPPSPT*CFAHAATFLLPPTYGLP 1018
VLFS IPL VPP PT C A AATF P G P
Sbjct: 353 VLFSSIPLVVPP*PTKCLAQAATFDCPAIKGPP 255
>gb|DR169308.1|DR169308 RTPHOS1_31_B02.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_31_B02_A029 5', mRNA sequence
Length = 433
Score = 171 bits (369), Expect(2) = 2e-055
Identities = 72/101 (71%), Positives = 83/101 (82%)
Frame = +2 / +2
Query: 1532 PYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHAND 1711
P + SL +LG + HRELAREAVRKSLVLLKNGKS+ PLLPL K A KILVAG+HA++
Sbjct: 131 PVANPSLVNQLGNKVHRELAREAVRKSLVLLKNGKSASKPLLPLNKNAAKILVAGTHADN 310
Query: 1712 LGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVY 1834
LG QCGGWTITWQG SGN+T GTTIL I++TV PST+VVY
Sbjct: 311 LGYQCGGWTITWQGLSGNSTKGTTILEAIKSTVSPSTEVVY 433
Score = 102 bits (218), Expect(2) = 9e-026
Identities = 51/95 (53%), Positives = 55/95 (57%)
Frame = -2 / -2
Query: 1830 TTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAFFGRGSN 1651
TT V G TV I RI PC VIVHPPH PR AW+PATRI AF +GS
Sbjct: 429 TTSVEGLTVDLIASRIVVPLVEFPLNPCQVIVHPPH**PRLSAWVPATRIFAAFLFKGSK 250
Query: 1650 GA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARL 1546
G D PFF TRDFLTAS A+S C+ PS RL
Sbjct: 249 GLLADFPFFNSTRDFLTASLANSLCTLLPSWLTRL 145
Score = 66.6 bits (139), Expect(2) = 2e-055
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +2 / +1
Query: 1409 YTEFIDDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENP 1534
YT+FI +LT+QV++ +I M R +DAV RILRVKFTMGLFE+P
Sbjct: 7 YTDFISNLTSQVKSGLISMPRRNDAVRRILRVKFTMGLFEHP 132
Score = 36.3 bits (73), Expect(2) = 9e-026
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 1533 GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSV 1411
G S PMVN T +IL TAS +L M + TC VR + SV
Sbjct: 131 GCSKSPMVNFTLKILRTASFLLGMEIKPLLTCEVRLLIKSV 9
>gb|BE762088.1|BE762088 NXCI_076_H01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_076_H01 5' similar to Arabidopsis
thaliana sequence At5g20950 beta-D-glucan
exohydrolase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 380
Score = 199 bits (429), Expect = 8e-050
Identities = 84/123 (68%), Positives = 97/123 (78%)
Frame = +2 / +3
Query: 1484 VYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPL 1663
V RILRVKFTMGLFE+P + SLA +LG + HRELAREAVRKSLVLLKNGKS PLLPL
Sbjct: 3 VRRILRVKFTMGLFEHPMANPSLANQLGSKAHRELAREAVRKSLVLLKNGKSDSKPLLPL 182
Query: 1664 PKKAGKILVAGSHANDLGNQCGGWTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSES 1843
K A KILVAG+H ++LG QC GWTITWQG SGNTT GTTIL I++ P+T+ Y E+
Sbjct: 183 DKNATKILVAGTHPDNLGYQCXGWTITWQGLSGNTTKGTTILEAIQSAXSPTTEXXYQEN 362
Query: 1844 PDS 1852
PD+
Sbjct: 363 PDA 371
Score = 112 bits (240), Expect = 9e-024
Identities = 61/122 (50%), Positives = 67/122 (54%)
Frame = -2 / -2
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG S V+G I RI PCHVIVHP H PR +PATRIL AF
Sbjct: 367 SGFS**XXSVVGLXADWIASRIVVPLVVFPLNPCHVIVHPXH**PRLSG*VPATRILVAF 188
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPSSPARLESG*GFSNRPMVNLTRRIL 1489
+GS G D PFF +TRDFLTAS A+S C+ PS ARL G S PMVN T RIL
Sbjct: 187 LSKGSKGLLSDFPFFNKTRDFLTASLANSLCALLPSWLARLGFAIGCSKSPMVNFTLRIL 8
Query: 1488 *T 1483
T
Sbjct: 7 RT 2
>gb|DR068670.1|DR068670 RTDK1_2_E04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_E04_A029 3', mRNA sequence
Length = 394
Score = 195 bits (421), Expect = 1e-048
Identities = 77/104 (74%), Positives = 86/104 (82%)
Frame = +2 / +3
Query: 1925 DNLNLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDALVAAWLPGSEGQGVA 2104
DN NLTIP G I++V G+ KC+V+LISGRPLV++PYL +DA V AWL G EGQGV
Sbjct: 3 DNFNLTIPLSGGDTIKNVWGSLKCLVILISGRPLVIKPYLPLVDAFVDAWLSGIEGQGVT 182
Query: 2105 DVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFGLT 2236
DV+FGDYGF GKLPRTWFKSVDQLPMNVGD HYDPLFP GFGLT
Sbjct: 183 DVIFGDYGFQGKLPRTWFKSVDQLPMNVGDKHYDPLFPLGFGLT 314
Score = 138 bits (296), Expect = 2e-031
Identities = 61/104 (58%), Positives = 71/104 (68%)
Frame = -2 / -1
Query: 2235 VSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAATSA 2056
V+PKP G GS*C SPTFMG+WST LNHV GSFP NP*SP TS TP PS P SHA+T A
Sbjct: 313 VNPKPKGNKGS*CLSPTFMGNWSTLLNHVLGSFP*NP*SPKITSVTPWPSMPESHASTKA 134
Query: 2055 SMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVRFRLS 1924
S + R G TSGLP+++ T H P T I P G+V+ +LS
Sbjct: 133 STNGR*GLITSGLPDIKITRHFKDPQTFLIVSPPLKGMVKLKLS 2
>gb|CF666393.1|CF666393 RTCNT1_23_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_23_A10_A029 3', mRNA sequence
Length = 696
Score = 194 bits (418), Expect = 3e-048
Identities = 75/100 (75%), Positives = 85/100 (85%)
Frame = +2 / +2
Query: 1934 NLTIPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDALVAAWLPGSEGQGVADVL 2113
NLTIP G I++VCG+ KC+V+LISGRPLV+EPYL +DA VAAWLPG+EGQGV DV+
Sbjct: 2 NLTIPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVI 181
Query: 2114 FGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFGL 2233
FGDY F GKL RTWFKSVDQLPMN+GD HYDPLFP GFGL
Sbjct: 182 FGDYRFQGKLARTWFKSVDQLPMNIGDQHYDPLFPLGFGL 301
Score = 118 bits (252), Expect = 2e-025
Identities = 56/102 (54%), Positives = 64/102 (62%)
Frame = -2 / -1
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L +PKP G GS*C SP F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 309 LQTNPKPKGNRGS*CWSPMFIGS*STLLNHVLASLP*KR*SPKITSVTPWPSVPGSHAAT 130
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGIVR 1936
AS + R GS TSGLP+++ T H P T I P G+V+
Sbjct: 129 KASTNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGMVK 4
>gb|BF518339.1|BF518339 NXSI_038_B12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_038_B12 5' similar to Arabidopsis thaliana
sequence At5g20950 beta-D-glucan exohydrolase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 364
Score = 172 bits (371), Expect = 8e-042
Identities = 67/97 (69%), Positives = 78/97 (80%)
Frame = +2 / +2
Query: 1943 IPAPGPSVIQSVCGAAKCVVVLISGRPLVVEPYLGDMDALVAAWLPGSEGQGVADVLFGD 2122
IP G I++VCG+ KC+V+LISGRPLV+EPYL +DA VAAWLPG+EGQGV DV+FGD
Sbjct: 2 IPLGGGDTIKTVCGSLKCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVIFGD 181
Query: 2123 YGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFPFGFGL 2233
Y F GKL RTWFK+V LPMN+GD HY LFP GFGL
Sbjct: 182 YRFQGKLARTWFKNVXXLPMNIGDQHYXXLFPLGFGL 292
Score = 113 bits (242), Expect = 5e-024
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = -2 / -2
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L +PKP G S*C SP F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 300 LQTNPKPKGNRXS*CWSPMFIGSXSTFLNHVLASLP*KR*SPKITSVTPWPSVPGSHAAT 121
Query: 2061 SASMSPRYGSTTSGLPEMRTTTHLAAPHTDWITLGPGAGI 1942
AS + R GS TSGLP+++ T H P T I P G+
Sbjct: 120 KASTNGR*GSITSGLPDIKITRHFKEPQTVLIVSPPPRGM 1
>gb|CO162092.1|CO162092 FLD1_33_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_D11_A029 3', mRNA sequence
Length = 644
Score = 170 bits (366), Expect = 4e-041
Identities = 65/81 (80%), Positives = 72/81 (88%)
Frame = +2 / +1
Query: 1991 KCVVVLISGRPLVVEPYLGDMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVD 2170
KC+V+LISGRPLV+EPYL +DA VAAWLPG+EGQGV DV+FGDY F GKL RTWFKSVD
Sbjct: 7 KCLVILISGRPLVIEPYLPLVDAFVAAWLPGTEGQGVTDVIFGDYRFQGKLARTWFKSVD 186
Query: 2171 QLPMNVGDAHYDPLFPFGFGL 2233
QLPMN+GD HYDPLFP GFGL
Sbjct: 187 QLPMNIGDQHYDPLFPLGFGL 249
Score = 108 bits (230), Expect = 2e-022
Identities = 50/83 (60%), Positives = 56/83 (67%)
Frame = -2 / -1
Query: 2241 LVVSPKPNGKSGS*CASPTFMGSWSTDLNHVRGSFPVNP*SPNSTSATPCPSDPGSHAAT 2062
L +PKP G GS*C SP F+GS ST LNHV S P *SP TS TP PS PGSHAAT
Sbjct: 257 LQTNPKPKGNRGS*CWSPMFIGS*STLLNHVLASLP*KR*SPKITSVTPWPSVPGSHAAT 78
Query: 2061 SASMSPRYGSTTSGLPEMRTTTH 1993
AS + R GS TSGLP+++ T H
Sbjct: 77 KASTNGR*GSITSGLPDIKITRH 9
>gb|BF516660.1|BF516660 NXSI_001_G06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_001_G06 5' similar to Arabidopsis thaliana
sequence At5g20950 beta-D-glucan exohydrolase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 422
Score = 168 bits (361), Expect = 2e-040
Identities = 72/118 (61%), Positives = 89/118 (75%)
Frame = +2 / +2
Query: 1553 AGELGKQEHRELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGG 1732
A +LG +EHR+LAREAVRKSLVLLKNGKS+ PLLPL K A KILVAG+H ++LG QCGG
Sbjct: 2 ANQLGSKEHRDLAREAVRKSLVLLKNGKSASQPLLPLNKNAPKILVAGTHPDNLGYQCGG 181
Query: 1733 WTITWQGSSGNTTAGTTILSGIEATVDPSTQVVYSESPDSGVLADKYDYAIVVVGEPP 1906
WTI WQG SGN T GTTILS I++ V ST+VVY ++PD+ + ++ +VV P
Sbjct: 182 WTIEWQGLSGNITIGTTILSAIQSAVSSSTEVVYQQNPDANYVKEQGFSYAIVVVGEP 355
Score = 91.8 bits (194), Expect(2) = 1e-024
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -2 / -3
Query: 1848 SGLSEYTTCVLGSTVASIPERIXXXXXXXXXXPCHVIVHPPHWLPRSLAWLPATRILPAF 1669
SG TT V T I ERI PCH IVHPPH PR +PATRIL AF
Sbjct: 297 SGFC**TTSVEELTADWIAERIVVPMVMFPLKPCHSIVHPPH**PRLSG*VPATRILGAF 118
Query: 1668 FGRGSNGA*EDLPFFRRTRDFLTASRASSRCSCFPS 1561
+GS G D PFF +T+DFLTAS A S CS PS
Sbjct: 117 LFKGSKGWLADFPFFNKTKDFLTASLAKSLCSLLPS 10
Score = 43.2 bits (88), Expect(2) = 1e-024
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2 / -3
Query: 1947 GIVRFRLSPNVSAYGGSPTTTIA 1879
G+V+ RLSPN+S GGSPTTTIA
Sbjct: 399 GMVKLRLSPNISV*GGSPTTTIA 331
>gb|AW064907.1|AW064907 ST37C08 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST37C08, mRNA sequence
Length = 578
Score = 144 bits (309), Expect = 3e-033
Identities = 56/73 (76%), Positives = 59/73 (80%)
Frame = +2 / +2
Query: 2021 PLVVEPYLGDMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAH 2200
PLV EPYL +DA VAAWLPG+EGQGV DV+FGDY F GKL RTWFKS DQLPMN GD
Sbjct: 2 PLVTEPYLPLVDAFVAAWLPGTEGQGVTDVIFGDYSFQGKLSRTWFKSADQLPMNAGDQQ 181
Query: 2201 YDPLFPFGFGLTT 2239
YDP FP GFGLTT
Sbjct: 182 YDPQFPLGFGLTT 220
>gb|AW064668.1|AW064668 ST34C05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST34C05, mRNA sequence
Length = 531
Score = 105 bits (225), Expect(2) = 2e-028
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2 / +3
Query: 449 AEYLKYKDPKQPVAVRIKDLLGRMTLAEKIGQMTQIERENATADALAKYFIGSVLSGGGS 628
A Y+ YKDP QP++ R+ DLL RM+L EKIGQMTQIER AT D + Y+IGSVLSGGGS
Sbjct: 192 AHYILYKDPSQPISARVDDLLARMSLEEKIGQMTQIERSVATPDVMTNYYIGSVLSGGGS 371
Query: 629 VXXXXXXXXXXXXMVTEMQKGA 694
MV ++KGA
Sbjct: 372 APAPQASPATWXXMVDGLKKGA 437
Score = 42.3 bits (86), Expect(2) = 2e-028
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 683 QKGALSTRLGIPIIYGIDAVHGHNNVYKATIFPHN 787
Q+G + T+L +P+IYGIDAV AT PHN
Sbjct: 425 QEGCMGTKLQVPMIYGIDAVMXTTMSMGATXLPHN 529
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,345,314,369
Number of Sequences: 355925
Number of extensions: 21395347
Number of successful extensions: 124905
Number of sequences better than 1.0e-020: 56
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 43019794180
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)