TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL10h01.xg.2.1
(610 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR691242.1|DR691242 EST1081328 Normalized pine embryo li... 143 1e-033
gb|DT636788.1|DT636788 EST1151719 Normalized pine embryo li... 143 1e-033
gb|DR080164.1|DR080164 RTFEPL1_20_F02.g1_A029 Roots plus ad... 141 4e-033
gb|DR097898.1|DR097898 STRR1_37_F08.g1_A033 Stem Response R... 141 4e-033
gb|DR080099.1|DR080099 RTFEPL1_20_F02.b1_A029 Roots plus ad... 141 5e-033
gb|BX678018.1|BX678018 BX678018 RN Pinus pinaster cDNA clon... 139 2e-032
gb|CO365044.1|CO365044 RTK1_23_G08.b1_A029 Roots minus pota... 105 3e-032
gb|CO365132.1|CO365132 RTK1_23_G08.g1_A029 Roots minus pota... 105 3e-032
gb|CX648400.1|CX648400 COLD1_28_A04.g1_A029 Root cold Pinus... 105 3e-032
gb|DR389128.1|DR389128 RTHG1_32_D01.g1_A029 Roots plus adde... 105 3e-032
gb|DR018025.1|DR018025 STRS1_20_B09.b1_A034 Shoot tip pitch... 138 3e-032
gb|CF392212.1|CF392212 RTDR3_8_F01.g1_A022 Loblolly pine ro... 103 2e-031
gb|DR014592.1|DR014592 HEAT1_50_A06.g1_A029 Root at 37 C fo... 97 2e-031
gb|CF473607.1|CF473607 RTWW2_3_E07.g1_A021 Well-watered lob... 135 2e-031
gb|CF670338.1|CF670338 RTCNT1_49_C11.g1_A029 Root control P... 135 2e-031
gb|CO174759.1|CO174759 NDL1_46_C11.b1_A029 Needles control ... 135 2e-031
gb|DR689329.1|DR689329 EST1079415 Normalized pine embryo li... 135 2e-031
gb|DT635662.1|DT635662 EST1150593 Normalized pine embryo li... 135 2e-031
gb|CO201067.1|CO201067 RTCNT2_3_A01.g1_A029 Root control 2 ... 134 4e-031
dbj|BD236677.1| Materials and method for modification of pl... 95 5e-031
gb|DR687713.1|DR687713 EST1077795 Normalized pine embryo li... 93 7e-031
gb|DT634395.1|DT634395 EST1149326 Normalized pine embryo li... 93 7e-031
gb|CF398798.1|CF398798 RTDS3_16_D02.b1_A022 Drought-stresse... 95 7e-031
dbj|BD236773.1| Materials and method for modification of pl... 95 7e-031
gb|CF400604.1|CF400604 RTWW1_6_E03.g1_A015 Well-watered lob... 133 8e-031
gb|CF668394.1|CF668394 RTCNT1_36_E12.b1_A029 Root control P... 133 8e-031
gb|CO362633.1|CO362633 RTK1_4_G06.g1_A029 Roots minus potas... 133 8e-031
gb|DR089840.1|DR089840 RTAL1_11_D03.b1_A029 Roots plus adde... 133 8e-031
gb|DR089997.1|DR089997 RTAL1_12_D02.b1_A029 Roots plus adde... 133 8e-031
gb|DR014494.1|DR014494 HEAT1_49_G08.g1_A029 Root at 37 C fo... 94 1e-030
gb|CO201770.1|CO201770 RTCNT2_8_B11.b1_A029 Root control 2 ... 94 1e-030
gb|CO367170.1|CO367170 RTK1_32_D07.g1_A029 Roots minus pota... 94 1e-030
gb|CF667790.1|CF667790 RTCNT1_32_B11.g1_A029 Root control P... 94 1e-030
gb|CF400432.1|CF400432 RTWW1_5_B03.g1_A015 Well-watered lob... 94 1e-030
gb|CX714485.1|CX714485 RTPQ1_22_F11.g1_A032 Roots treated w... 94 1e-030
gb|CO361933.1|CO361933 NDL2_8_B10.b1_A029 Needles control 2... 94 1e-030
gb|CO363086.1|CO363086 RTK1_7_C06.g1_A029 Roots minus potas... 94 1e-030
gb|CF402748.1|CF402748 RTWW1_22_F11.g1_A015 Well-watered lo... 94 1e-030
gb|BX251055.1|BX251055 BX251055 Pinus pinaster differenciat... 96 1e-030
gb|CF479386.1|CF479386 RTWW3_23_D10.g1_A022 Well-watered lo... 94 1e-030
gb|BX252135.1|BX252135 BX252135 Pinus pinaster differenciat... 96 1e-030
gb|CF387264.1|CF387264 RTDR1_11_H07.g1_A015 Loblolly pine r... 94 1e-030
gb|CF400467.1|CF400467 RTWW1_5_D01.g1_A015 Well-watered lob... 94 1e-030
gb|CF673205.1|CF673205 RTCNT1_76_H09.g1_A029 Root control P... 94 1e-030
gb|CF477400.1|CF477400 RTWW3_7_E06.g1_A022 Well-watered lob... 94 1e-030
gb|CF400116.1|CF400116 RTWW1_3_C08.b1_A015 Well-watered lob... 94 1e-030
gb|DR058835.1|DR058835 RTNIT1_14_E03.b1_A029 Roots minus ni... 94 1e-030
gb|CF387702.1|CF387702 RTDR1_19_C04.g1_A015 Loblolly pine r... 94 1e-030
gb|DR090097.1|DR090097 RTAL1_12_E04.g1_A029 Roots plus adde... 94 1e-030
gb|BX254990.1|BX254990 BX254990 Pinus pinaster differenciat... 96 1e-030
gb|CX715632.1|CX715632 RTPQ1_35_B05.g1_A032 Roots treated w... 94 1e-030
gb|BX682636.1|BX682636 BX682636 Pinus pinaster differenciat... 96 1e-030
gb|BX682365.2|BX682365 BX682365 Pinus pinaster differenciat... 96 1e-030
gb|CO201224.1|CO201224 RTCNT2_4_H11.b1_A029 Root control 2 ... 133 1e-030
gb|CV031978.1|CV031978 RTNACL1_5_A02.b1_A029 Roots plus add... 133 1e-030
gb|CV032836.1|CV032836 RTNACL1_18_D06.g1_A029 Roots plus ad... 133 1e-030
gb|DR688836.1|DR688836 EST1078922 Normalized pine embryo li... 133 1e-030
gb|DT635052.1|DT635052 EST1149983 Normalized pine embryo li... 133 1e-030
dbj|BD236794.1| Materials and method for modification of pl... 94 1e-030
dbj|BD236776.1| Materials and method for modification of pl... 94 1e-030
dbj|BD236723.1| Materials and method for modification of pl... 94 1e-030
dbj|BD236722.1| Materials and method for modification of pl... 94 1e-030
gb|BX249086.1|BX249086 BX249086 Pinus pinaster differenciat... 133 1e-030
gb|BX677121.1|BX677121 BX677121 RN Pinus pinaster cDNA clon... 133 1e-030
gb|CO173511.1|CO173511 NDL1_36_E01.g1_A029 Needles control ... 133 1e-030
gb|CO201013.1|CO201013 RTCNT2_3_C09.b1_A029 Root control 2 ... 133 1e-030
gb|CV036004.1|CV036004 RTNACL1_44_A09.b1_A029 Roots plus ad... 133 1e-030
gb|DR014130.1|DR014130 HEAT1_23_C11.g1_A029 Root at 37 C fo... 133 1e-030
gb|DR015623.1|DR015623 STRS1_4_D08.g1_A034 Shoot tip pitch ... 133 1e-030
gb|DR025237.1|DR025237 STRS1_70_A07.g1_A034 Shoot tip pitch... 133 1e-030
gb|DR054279.1|DR054279 RTCA1_16_H09.b1_A029 Roots minus cal... 133 1e-030
gb|DR055616.1|DR055616 RTCA1_24_G01.g2_A029 Roots minus cal... 133 1e-030
gb|DR058695.1|DR058695 RTNIT1_13_G12.b1_A029 Roots minus ni... 133 1e-030
gb|DR061218.1|DR061218 RTNIT1_32_G06.g1_A029 Roots minus ni... 133 1e-030
gb|DR078679.1|DR078679 RTFEPL1_6_E07.b1_A029 Roots plus add... 133 1e-030
gb|DR079016.1|DR079016 RTFEPL1_8_A03.g1_A029 Roots plus add... 133 1e-030
gb|DR091647.1|DR091647 RTAL1_23_B07.b1_A029 Roots plus adde... 133 1e-030
gb|DR161184.1|DR161184 RTFE1_10_H02.b1_A029 Roots minus iro... 133 1e-030
gb|DR165209.1|DR165209 RTPHOS1_3_H10.b1_A029 Roots minus ph... 133 1e-030
gb|DR743976.1|DR743976 RTCU1_19_A02.g1_A029 Roots plus adde... 133 1e-030
gb|CO361483.1|CO361483 NDL2_5_D02.b1_A029 Needles control 2... 96 2e-030
gb|DR068590.1|DR068590 RTDK1_1_E09.g1_A029 Roots, dark Pinu... 98 2e-030
gb|CF671727.1|CF671727 RTCNT1_58_H08.g1_A029 Root control P... 95 2e-030
gb|CO367174.1|CO367174 RTK1_32_D11.g1_A029 Roots minus pota... 95 2e-030
gb|CO171457.1|CO171457 NDL1_21_F07.g1_A029 Needles control ... 96 2e-030
gb|DT637268.1|DT637268 EST1152199 Normalized pine embryo li... 92 2e-030
gb|BQ696475.1|BQ696475 NXPV_041_G02_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|DR022204.1|DR022204 STRS1_49_C02.g1_A034 Shoot tip pitch... 98 2e-030
gb|BG526961.1|BG526961 NXPV_057_H06_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|BQ696081.1|BQ696081 NXPV_036_B08_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|BG832494.1|BG832494 NXPV_073_E06_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|BQ697514.1|BQ697514 NXPV_054_D04_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|DR692088.1|DR692088 EST1082175 Normalized pine embryo li... 92 2e-030
gb|BQ696238.1|BQ696238 NXPV_037_A03_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|BF517059.1|BF517059 NXSI_008_F10_F NXSI (Nsf Xylem Side ... 95 2e-030
gb|BG832696.1|BG832696 NXPV_078_E07_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|BQ698576.1|BQ698576 NXPV_071_F01_F NXPV (Nsf Xylem Plani... 95 2e-030
gb|CF388888.1|CF388888 RTDR2_16_E10.b1_A021 Loblolly pine r... 132 2e-030
gb|CF664459.1|CF664459 RTCNT1_9_H05.g1_A029 Root control Pi... 132 2e-030
gb|CO198305.1|CO198305 GEO1_12_E11.g1_A029 Root gravitropis... 132 2e-030
gb|CO200627.1|CO200627 GEO2_8_C07.g1_A032 Root gravitropism... 132 2e-030
gb|CO367672.1|CO367672 RTK1_35_F12.g1_A029 Roots minus pota... 132 2e-030
gb|DR069069.1|DR069069 RTDK1_4_E04.g1_A029 Roots, dark Pinu... 132 2e-030
gb|DR080738.1|DR080738 RTFEPL1_24_G11.g1_A029 Roots plus ad... 132 2e-030
gb|DR109981.1|DR109981 RTS1_1_D08.b1_A029 Roots minus sulfu... 96 3e-030
gb|CO366296.1|CO366296 RTK1_27_B08.b1_A029 Roots minus pota... 94 3e-030
gb|CO364357.1|CO364357 RTK1_15_F06.b1_A029 Roots minus pota... 94 3e-030
gb|CF387829.1|CF387829 RTDR1_18_C05.g1_A015 Loblolly pine r... 94 3e-030
gb|CF395400.1|CF395400 RTDS2_11_G06.g1_A021 Drought-stresse... 94 3e-030
gb|DR049848.1|DR049848 RTBOR1_19_B04.g1_A029 Roots plus add... 94 3e-030
gb|DR051651.1|DR051651 RTBOR1_31_B03.g1_A029 Roots plus add... 94 3e-030
gb|CF387358.1|CF387358 RTDR1_12_C10.g1_A015 Loblolly pine r... 94 3e-030
gb|CF386184.1|CF386184 RTDR1_8_G11.g1_A015 Loblolly pine ro... 94 3e-030
gb|CF400045.1|CF400045 RTWW1_2_H03.g1_A015 Well-watered lob... 94 3e-030
gb|DR388861.1|DR388861 RTHG1_30_H08.g1_A029 Roots plus adde... 94 3e-030
gb|CF666588.1|CF666588 RTCNT1_24_A07.g1_A029 Root control P... 94 3e-030
gb|BQ700809.1|BQ700809 NXRV111_F06_F NXRV (Nsf Xylem Root w... 92 3e-030
gb|DR060096.1|DR060096 RTNIT1_25_E02.g1_A029 Roots minus ni... 94 3e-030
gb|BF778014.1|BF778014 NXSI_079_H09_F NXSI (Nsf Xylem Side ... 131 4e-030
gb|DR049814.1|DR049814 RTBOR1_19_F09.b1_A029 Roots plus add... 131 4e-030
gb|DR689948.1|DR689948 EST1080034 Normalized pine embryo li... 97 5e-030
gb|DR180351.1|DR180351 RTMNUT1_28_C07.b1_A029 Roots minus m... 95 6e-030
gb|CO367102.1|CO367102 RTK1_32_D11.b1_A029 Roots minus pota... 95 6e-030
gb|DR160605.1|DR160605 RTFE1_7_B07.b1_A029 Roots minus iron... 95 6e-030
gb|DR160693.1|DR160693 RTFE1_7_B07.g1_A029 Roots minus iron... 95 6e-030
gb|CX712742.1|CX712742 RTPQ1_4_B01.g2_A032 Roots treated wi... 91 6e-030
gb|DR685646.1|DR685646 EST1075723 Normalized pine embryo li... 95 6e-030
gb|CO199848.1|CO199848 GEO2_3_G12.g1_A032 Root gravitropism... 95 6e-030
gb|CO159284.1|CO159284 FLD1_12_D07.g1_A029 Root flooded Pin... 95 6e-030
gb|CV032799.1|CV032799 RTNACL1_18_A01.g1_A029 Roots plus ad... 95 6e-030
gb|DR080673.1|DR080673 RTFEPL1_24_H08.b1_A029 Roots plus ad... 94 6e-030
gb|DR689773.1|DR689773 EST1079859 Normalized pine embryo li... 91 6e-030
gb|CO173610.1|CO173610 NDL1_37_B10.g1_A029 Needles control ... 95 6e-030
gb|CF393384.1|CF393384 RTDR3_20_C12.g1_A022 Loblolly pine r... 91 6e-030
gb|DR180427.1|DR180427 RTMNUT1_28_C07.g1_A029 Roots minus m... 95 6e-030
gb|DR161081.1|DR161081 RTFE1_9_F01.g1_A029 Roots minus iron... 94 6e-030
gb|CF390100.1|CF390100 RTDR2_12_C04.g1_A021 Loblolly pine r... 91 6e-030
gb|CF673185.1|CF673185 RTCNT1_76_F05.g1_A029 Root control P... 95 6e-030
gb|CF474445.1|CF474445 RTWW2_20_A03.g1_A021 Well-watered lo... 94 7e-030
gb|CF673176.1|CF673176 RTCNT1_76_E05.g1_A029 Root control P... 95 7e-030
gb|CO362014.1|CO362014 NDL2_8_C07.g1_A029 Needles control 2... 95 7e-030
gb|AL751314.1|AL751314 AL751314 RS Pinus pinaster cDNA clon... 95 7e-030
gb|AA556947.1|AA556947 789 Loblolly pine C Pinus taeda cDNA... 91 7e-030
gb|AL750829.1|AL750829 AL750829 RN Pinus pinaster cDNA clon... 95 7e-030
gb|BX678311.1|BX678311 BX678311 RN Pinus pinaster cDNA clon... 95 7e-030
gb|DR055460.1|DR055460 RTCA1_23_G05.g2_A029 Roots minus cal... 95 7e-030
gb|BX681816.1|BX681816 BX681816 RS Pinus pinaster cDNA clon... 95 7e-030
gb|AL751209.1|AL751209 AL751209 RS Pinus pinaster cDNA clon... 95 7e-030
gb|BQ635208.1|BQ635208 NXRV079_D01_F NXRV (Nsf Xylem Root w... 95 7e-030
gb|BG318465.1|BG318465 NXPV_013_H11_F NXPV (Nsf Xylem Plani... 95 7e-030
gb|CR394083.1|CR394083 CR394083 RN Pinus pinaster cDNA clon... 95 7e-030
gb|BX680794.1|BX680794 BX680794 RS Pinus pinaster cDNA clon... 95 7e-030
dbj|BD236785.1| Materials and method for modification of pl... 91 7e-030
gb|BX680384.1|BX680384 BX680384 RS Pinus pinaster cDNA clon... 95 7e-030
gb|BX677196.1|BX677196 BX677196 RN Pinus pinaster cDNA clon... 95 7e-030
gb|BX677854.1|BX677854 BX677854 RN Pinus pinaster cDNA clon... 95 7e-030
gb|BG039746.1|BG039746 NXSI_103_E12_F NXSI (Nsf Xylem Side ... 95 7e-030
gb|CV032869.1|CV032869 RTNACL1_18_G05.g1_A029 Roots plus ad... 95 7e-030
gb|AW289624.1|AW289624 NXNV003H01F Nsf Xylem Normal wood Ve... 95 7e-030
gb|CD028230.1|CD028230 NXNV003H01 Nsf Xylem Normal wood Ver... 95 7e-030
dbj|BD236727.1| Materials and method for modification of pl... 95 7e-030
dbj|BD236718.1| Materials and method for modification of pl... 95 7e-030
dbj|BD236679.1| Materials and method for modification of pl... 95 7e-030
gb|DR079757.1|DR079757 RTFEPL1_17_A03.g1_A029 Roots plus ad... 95 7e-030
gb|DR683912.1|DR683912 EST1073988 Normalized pine embryo li... 93 9e-030
gb|BE496450.1|BE496450 NXCI_018_C06_F NXCI (Nsf Xylem Compr... 91 9e-030
dbj|BD236777.1| Materials and method for modification of pl... 98 9e-030
dbj|BD236740.1| Materials and method for modification of pl... 95 9e-030
gb|AW042640.1|AW042640 ST24C04 Pine TriplEx shoot tip libra... 130 1e-029
dbj|BD236748.1| Materials and method for modification of pl... 130 1e-029
gb|DR069468.1|DR069468 RTDK1_7_A07.g1_A029 Roots, dark Pinu... 95 1e-029
gb|DT632821.1|DT632821 EST1147752 Normalized pine embryo li... 95 1e-029
gb|DR685496.1|DR685496 EST1075573 Normalized pine embryo li... 95 1e-029
gb|CF477726.1|CF477726 RTWW3_9_F07.g1_A022 Well-watered lob... 95 1e-029
gb|DR049031.1|DR049031 RTBOR1_12_G02.g1_A029 Roots plus add... 95 1e-029
gb|DR166665.1|DR166665 RTPHOS1_13_D10.g1_A029 Roots minus p... 95 1e-029
gb|DR054985.1|DR054985 RTCA1_20_G04.g1_A029 Roots minus cal... 96 1e-029
gb|BX251110.1|BX251110 BX251110 Pinus pinaster differenciat... 95 1e-029
gb|BX255055.1|BX255055 BX255055 Pinus pinaster differenciat... 95 1e-029
gb|BX249619.1|BX249619 BX249619 Pinus pinaster differenciat... 95 1e-029
gb|CR393887.1|CR393887 CR393887 RN Pinus pinaster cDNA clon... 95 1e-029
gb|BG319138.1|BG319138 NXPV_024_C03_F NXPV (Nsf Xylem Plani... 93 1e-029
gb|CO172623.1|CO172623 NDL1_30_G11.g1_A029 Needles control ... 129 1e-029
dbj|BD236800.1| Materials and method for modification of pl... 93 2e-029
gb|BG833082.1|BG833082 NXPV_088_H09_F NXPV (Nsf Xylem Plani... 92 2e-029
gb|BG318290.1|BG318290 NXPV_009_H06_F NXPV (Nsf Xylem Plani... 92 2e-029
dbj|BD236803.1| Materials and method for modification of pl... 92 2e-029
gb|CV032782.1|CV032782 RTNACL1_18_G05.b1_A029 Roots plus ad... 95 2e-029
gb|DR389051.1|DR389051 RTHG1_32_D01.b1_A029 Roots plus adde... 105 2e-029
gb|DR167572.1|DR167572 RTPHOS1_19_E01.g1_A029 Roots minus p... 99 2e-029
gb|DR025258.1|DR025258 STRS1_70_C05.g1_A034 Shoot tip pitch... 95 2e-029
gb|DR111651.1|DR111651 RTS1_19_G01.b1_A029 Roots minus sulf... 94 2e-029
dbj|BD236802.1| Materials and method for modification of pl... 90 2e-029
gb|BF609180.1|BF609180 NXSI_041_C02_F NXSI (Nsf Xylem Side ... 89 3e-029
dbj|BD236678.1| Materials and method for modification of pl... 93 4e-029
gb|BM157507.1|BM157507 NXLV_020_C04_F NXLV (Nsf Xylem Late ... 127 5e-029
gb|CO365727.1|CO365727 RTK1_18_G08.g1_A029 Roots minus pota... 93 6e-029
gb|DT635138.1|DT635138 EST1150069 Normalized pine embryo li... 88 6e-029
gb|DR689074.1|DR689074 EST1079160 Normalized pine embryo li... 88 6e-029
gb|DT637214.1|DT637214 EST1152145 Normalized pine embryo li... 94 6e-029
gb|DR692037.1|DR692037 EST1082124 Normalized pine embryo li... 94 6e-029
gb|CF390295.1|CF390295 RTDR2_18_C01.g1_A021 Loblolly pine r... 91 6e-029
gb|BQ695874.1|BQ695874 NXPV_033_F05_F NXPV (Nsf Xylem Plani... 92 8e-029
gb|DR093629.1|DR093629 STRR1_9_A08.g1_A033 Stem Response Re... 94 1e-028
gb|CX651140.1|CX651140 COLD1_50_A03.g1_A029 Root cold Pinus... 94 1e-028
gb|CO368482.1|CO368482 RTK1_40_H05.g1_A029 Roots minus pota... 94 1e-028
gb|CF476169.1|CF476169 RTWW2_21_A09.g1_A021 Well-watered lo... 94 1e-028
gb|CF389493.1|CF389493 RTDR2_7_D07.g1_A021 Loblolly pine ro... 94 1e-028
gb|CF664608.1|CF664608 RTCNT1_10_H08.g1_A029 Root control P... 94 1e-028
gb|DR117974.1|DR117974 RTMG1_10_H07.b1_A029 Roots minus mag... 91 1e-028
gb|BQ290859.1|BQ290859 NXRV050_E07_F NXRV (Nsf Xylem Root w... 94 1e-028
gb|BG040408.1|BG040408 NXSI_107_H10_F NXSI (Nsf Xylem Side ... 94 1e-028
gb|CF391047.1|CF391047 RTDR3_3_F09.g1_A022 Loblolly pine ro... 94 1e-028
gb|CO201576.1|CO201576 RTCNT2_6_E08.g1_A029 Root control 2 ... 94 1e-028
gb|CO360950.1|CO360950 NDL2_1_D05.g1_A029 Needles control 2... 94 1e-028
gb|DT631956.1|DT631956 EST1146887 Normalized pine embryo li... 94 1e-028
gb|DR056255.1|DR056255 RTCA1_29_C04.b1_A029 Roots minus cal... 95 1e-028
gb|CO168629.1|CO168629 NDL1_1_A11.g1_A029 Needles control P... 94 1e-028
gb|CO169088.1|CO169088 NDL1_4_C11.g1_A029 Needles control P... 94 1e-028
gb|CO176103.1|CO176103 NDL1_59_E09.g1_A029 Needles control ... 92 1e-028
gb|CF389295.1|CF389295 RTDR2_9_D12.g1_A021 Loblolly pine ro... 94 2e-028
gb|CR394033.1|CR394033 CR394033 RN Pinus pinaster cDNA clon... 95 2e-028
gb|CO169624.1|CO169624 NDL1_8_H11.b1_A029 Needles control P... 94 2e-028
dbj|BD236782.1| Materials and method for modification of pl... 94 2e-028
gb|BX678319.1|BX678319 BX678319 RN Pinus pinaster cDNA clon... 95 2e-028
gb|BX678627.1|BX678627 BX678627 RS Pinus pinaster cDNA clon... 94 2e-028
gb|CX715063.1|CX715063 RTPQ1_30_E11.g1_A032 Roots treated w... 94 2e-028
gb|DR072309.1|DR072309 RTDK1_25_A01.g1_A029 Roots, dark Pin... 92 2e-028
dbj|BD236759.1| Materials and method for modification of pl... 93 2e-028
gb|AI812719.1|AI812719 18C6 Pine Lambda Zap Xylem library P... 126 2e-028
gb|DR684959.1|DR684959 EST1075036 Normalized pine embryo li... 94 2e-028
gb|CO362936.1|CO362936 RTK1_6_D09.g1_A029 Roots minus potas... 94 2e-028
gb|BQ655919.1|BQ655919 NXRV100_H10_F NXRV (Nsf Xylem Root w... 90 2e-028
dbj|BD236733.1| Materials and method for modification of pl... 91 2e-028
gb|CO174152.1|CO174152 NDL1_42_C07.b1_A029 Needles control ... 125 2e-028
gb|DN612645.1|DN612645 EST965695 Subtracted pine embryo lib... 125 2e-028
gb|DN613892.1|DN613892 EST966942 Subtracted pine embryo lib... 125 2e-028
gb|DN614675.1|DN614675 EST967725 Subtracted pine embryo lib... 125 2e-028
gb|DT629123.1|DT629123 EST1155693 Subtracted pine embryo li... 125 2e-028
gb|DR025172.1|DR025172 STRS1_70_C05.b1_A034 Shoot tip pitch... 95 3e-028
gb|CX648468.1|CX648468 COLD1_28_G08.g1_A029 Root cold Pinus... 91 3e-028
gb|CF392855.1|CF392855 RTDR3_19_C07.g1_A022 Loblolly pine r... 91 3e-028
gb|CF393544.1|CF393544 RTDR3_13_D04.g1_A022 Loblolly pine r... 91 3e-028
gb|CF389627.1|CF389627 RTDR2_8_B04.g1_A021 Loblolly pine ro... 91 3e-028
gb|AA556959.1|AA556959 801 Loblolly pine C Pinus taeda cDNA... 91 3e-028
gb|BQ634140.1|BQ634140 NXRV064_C07_F NXRV (Nsf Xylem Root w... 91 3e-028
dbj|BD236770.1| Materials and method for modification of pl... 91 3e-028
gb|DR072057.1|DR072057 RTDK1_23_G04.g1_A029 Roots, dark Pin... 91 3e-028
dbj|BD236735.1| Materials and method for modification of pl... 91 3e-028
gb|BM158151.1|BM158151 NXLV_030_B06_F NXLV (Nsf Xylem Late ... 91 3e-028
gb|DR160728.1|DR160728 RTFE1_7_E08.g1_A029 Roots minus iron... 125 3e-028
gb|DR049906.1|DR049906 RTBOR1_19_H02.g1_A029 Roots plus add... 91 4e-028
gb|CO200212.1|CO200212 GEO2_6_C09.b1_A032 Root gravitropism... 91 4e-028
gb|CO364445.1|CO364445 RTK1_15_F04.g1_A029 Roots minus pota... 91 4e-028
gb|DR078685.1|DR078685 RTFEPL1_6_F01.b1_A029 Roots plus add... 91 4e-028
gb|CO200294.1|CO200294 GEO2_6_C09.g1_A032 Root gravitropism... 91 4e-028
gb|DR165499.1|DR165499 RTPHOS1_5_A12.g1_A029 Roots minus ph... 91 4e-028
gb|CO166785.1|CO166785 FLD1_64_B02.g1_A029 Root flooded Pin... 91 4e-028
gb|DR095098.1|DR095098 STRR1_18_F07.g1_A033 Stem Response R... 91 4e-028
gb|CV034171.1|CV034171 RTNACL1_39_E01.b1_A029 Roots plus ad... 91 4e-028
gb|CO198162.1|CO198162 GEO1_11_E05.g1_A029 Root gravitropis... 91 4e-028
gb|CF475842.1|CF475842 RTWW2_15_D08.g1_A021 Well-watered lo... 91 4e-028
gb|DR058450.1|DR058450 RTNIT1_11_G12.g1_A029 Roots minus ni... 91 4e-028
gb|DR692899.1|DR692899 EST1082987 Normalized pine embryo li... 94 4e-028
gb|CV036496.1|CV036496 RTNACL1_59_D12.g1_A029 Roots plus ad... 91 4e-028
gb|CV034533.1|CV034533 RTNACL1_9_E03.g1_A029 Roots plus add... 91 4e-028
gb|CV034538.1|CV034538 RTNACL1_9_F03.g1_A029 Roots plus add... 91 4e-028
gb|CF478518.1|CF478518 RTWW3_20_G08.g1_A022 Well-watered lo... 91 4e-028
gb|CF666201.1|CF666201 RTCNT1_21_C11.g1_A029 Root control P... 91 4e-028
gb|DR047903.1|DR047903 RTBOR1_5_A01.g2_A029 Roots plus adde... 91 4e-028
gb|DR089447.1|DR089447 RTAL1_8_F03.g1_A029 Roots plus added... 91 4e-028
gb|DR011830.1|DR011830 HEAT1_8_E01.b1_A029 Root at 37 C for... 91 4e-028
gb|CO362254.1|CO362254 RTK1_2_H07.b1_A029 Roots minus potas... 91 4e-028
gb|CV034526.1|CV034526 RTNACL1_9_D03.g1_A029 Roots plus add... 91 4e-028
gb|DR025648.1|DR025648 STRS1_72_H11.g1_A034 Shoot tip pitch... 91 4e-028
gb|DR091978.1|DR091978 RTAL1_25_F03.b1_A029 Roots plus adde... 91 4e-028
gb|DR096894.1|DR096894 STRR1_31_C12.b1_A033 Stem Response R... 91 4e-028
gb|DR070126.1|DR070126 RTDK1_11_A07.g1_A029 Roots, dark Pin... 91 4e-028
dbj|BD236787.1| Materials and method for modification of pl... 91 4e-028
dbj|BD236766.1| Materials and method for modification of pl... 91 4e-028
gb|BE582328.1|BE582328 NXCI_032_B03_F NXCI (Nsf Xylem Compr... 93 4e-028
gb|CO362008.1|CO362008 NDL2_8_B10.g1_A029 Needles control 2... 94 5e-028
gb|DR079955.1|DR079955 RTFEPL1_19_B01.b1_A029 Roots plus ad... 85 5e-028
gb|BG318464.1|BG318464 NXPV_013_H06_F NXPV (Nsf Xylem Plani... 89 5e-028
gb|CO159117.1|CO159117 FLD1_11_B01.g1_A029 Root flooded Pin... 95 5e-028
gb|CF476502.1|CF476502 RTWW3_1_H04.g1_A022 Well-watered lob... 124 6e-028
gb|BQ695611.1|BQ695611 NXPV_030_F05_F NXPV (Nsf Xylem Plani... 87 7e-028
gb|AW698257.1|AW698257 NXNV_070_G06_F Nsf Xylem Normal wood... 89 7e-028
gb|CD027868.1|CD027868 NXNV_070_G06 Nsf Xylem Normal wood V... 89 7e-028
dbj|BD236732.1| Materials and method for modification of pl... 90 7e-028
gb|DR018105.1|DR018105 STRS1_20_B09.g1_A034 Shoot tip pitch... 123 8e-028
gb|CO367098.1|CO367098 RTK1_32_D07.b1_A029 Roots minus pota... 94 1e-027
gb|BX251529.1|BX251529 BX251529 Pinus pinaster differenciat... 91 1e-027
gb|AL750678.1|AL750678 AL750678 RN Pinus pinaster cDNA clon... 91 1e-027
gb|BX667528.1|BX667528 BX667528 RN Pinus pinaster cDNA clon... 94 1e-027
gb|CR392952.1|CR392952 CR392952 RN Pinus pinaster cDNA clon... 91 1e-027
gb|CF389327.1|CF389327 RTDR2_9_B04.g1_A021 Loblolly pine ro... 89 1e-027
gb|CF389094.1|CF389094 RTDR2_13_A12.g1_A021 Loblolly pine r... 93 1e-027
gb|DR068744.1|DR068744 RTDK1_2_D09.g1_A029 Roots, dark Pinu... 89 2e-027
gb|DR088401.1|DR088401 RTAL1_1_A06.g1_A029 Roots plus added... 84 2e-027
gb|CO364170.1|CO364170 RTK1_14_D03.b1_A029 Roots minus pota... 122 2e-027
gb|CO361939.1|CO361939 NDL2_8_C07.b1_A029 Needles control 2... 95 3e-027
gb|CX714352.1|CX714352 RTPQ1_20_G05.g1_A032 Roots treated w... 94 3e-027
gb|AW289722.1|AW289722 NXNV005G08F Nsf Xylem Normal wood Ve... 90 3e-027
gb|CD028338.1|CD028338 NXNV005G08 Nsf Xylem Normal wood Ver... 90 3e-027
gb|BG833024.1|BG833024 NXPV_088_A10_F NXPV (Nsf Xylem Plani... 95 3e-027
gb|BG318913.1|BG318913 NXPV_021_D08_F NXPV (Nsf Xylem Plani... 72 4e-027
gb|BG318386.1|BG318386 NXPV_013_A04_F NXPV (Nsf Xylem Plani... 84 5e-027
gb|CO171474.1|CO171474 NDL1_21_H09.g1_A029 Needles control ... 120 8e-027
gb|DR057908.1|DR057908 RTNIT1_8_C01.g1_A029 Roots minus nit... 91 9e-027
gb|DR166000.1|DR166000 RTPHOS1_8_D11.g1_A029 Roots minus ph... 90 9e-027
gb|CX648267.1|CX648267 COLD1_27_C07.g1_A029 Root cold Pinus... 90 9e-027
gb|CX646355.1|CX646355 COLD1_8_G09.g1_A029 Root cold Pinus ... 90 9e-027
gb|CO174270.1|CO174270 NDL1_42_H03.g1_A029 Needles control ... 95 1e-026
gb|BG039760.1|BG039760 NXSI_103_G03_F NXSI (Nsf Xylem Side ... 83 1e-026
gb|DR694339.1|DR694339 EST1084431 Normalized pine embryo li... 95 2e-026
gb|CO197030.1|CO197030 GEO1_3_A02.g1_A029 Root gravitropism... 85 2e-026
gb|CR394093.1|CR394093 CR394093 RN Pinus pinaster cDNA clon... 84 2e-026
gb|BQ701875.1|BQ701875 NXSI_121_F04_F NXSI (Nsf Xylem Side ... 87 2e-026
gb|CF668926.1|CF668926 RTCNT1_39_B08.g1_A029 Root control P... 90 3e-026
gb|BE187389.1|BE187389 NXNV_163_D03_F Nsf Xylem Normal wood... 84 3e-026
gb|CX714628.1|CX714628 RTPQ1_24_C09.b1_A032 Roots treated w... 90 4e-026
gb|DR078173.1|DR078173 RTFEPL1_2_H06.b1_A029 Roots plus add... 90 4e-026
gb|CF388809.1|CF388809 RTDR2_15_D01.g1_A021 Loblolly pine r... 86 4e-026
gb|BE241149.1|BE241149 NXNV_173_D12_F Nsf Xylem Normal wood... 83 4e-026
gb|DR081748.1|DR081748 RTFEPL1_32_B07.b1_A029 Roots plus ad... 91 6e-026
dbj|BD236703.1| Materials and method for modification of pl... 87 6e-026
gb|AW056625.1|AW056625 ST53G08 Pine TriplEx shoot tip libra... 117 7e-026
gb|CF667213.1|CF667213 RTCNT1_28_G10.g1_A029 Root control P... 117 7e-026
gb|BG317905.1|BG317905 NXPV_007_A12_F NXPV (Nsf Xylem Plani... 98 1e-025
gb|BQ696551.1|BQ696551 NXPV_042_E09_F NXPV (Nsf Xylem Plani... 80 1e-025
gb|BG275452.1|BG275452 NXSI_139_A02_F NXSI (Nsf Xylem Side ... 82 1e-025
gb|BG318534.1|BG318534 NXPV_014_H11_F NXPV (Nsf Xylem Plani... 82 1e-025
gb|CO364447.1|CO364447 RTK1_15_F06.g1_A029 Roots minus pota... 94 3e-025
dbj|BD236717.1| Materials and method for modification of pl... 93 4e-025
gb|CO364599.1|CO364599 RTK1_16_E02.g1_A029 Roots minus pota... 94 4e-025
gb|AW010295.1|AW010295 ST04D05 Pine TriplEx shoot tip libra... 83 4e-025
gb|CV036105.1|CV036105 RTNACL1_44_E05.g1_A029 Roots plus ad... 91 4e-025
gb|CO166641.1|CO166641 FLD1_63_A08.g1_A029 Root flooded Pin... 97 5e-025
gb|DR014514.1|DR014514 HEAT1_50_A06.b1_A029 Root at 37 C fo... 97 5e-025
gb|BQ697007.1|BQ697007 NXPV_048_B01_F NXPV (Nsf Xylem Plani... 79 5e-025
gb|BG317536.1|BG317536 NXPV_002_H11_F NXPV (Nsf Xylem Plani... 77 5e-025
gb|BG833039.1|BG833039 NXPV_088_C08_F NXPV (Nsf Xylem Plani... 80 6e-025
gb|CX712945.1|CX712945 RTPQ1_5_H08.g1_A032 Roots treated wi... 91 7e-025
gb|CX650736.1|CX650736 COLD1_47_F07.g1_A029 Root cold Pinus... 91 7e-025
gb|DR025443.1|DR025443 STRS1_71_D08.g1_A034 Shoot tip pitch... 91 7e-025
gb|CO365852.1|CO365852 RTK1_19_D03.g1_A029 Roots minus pota... 95 1e-024
gb|BX677307.1|BX677307 BX677307 RN Pinus pinaster cDNA clon... 94 1e-024
dbj|BD236801.1| Materials and method for modification of pl... 95 3e-024
gb|BG485710.1|BG485710 NXPV_038_A07_F NXPV (Nsf Xylem Plani... 91 3e-024
gb|BQ698073.1|BQ698073 NXPV_064_B12_F NXPV (Nsf Xylem Plani... 91 3e-024
gb|BG318896.1|BG318896 NXPV_021_B11_F NXPV (Nsf Xylem Plani... 76 5e-024
gb|BF516630.1|BF516630 NXSI_001_C11_F NXSI (Nsf Xylem Side ... 94 5e-024
gb|DR018200.1|DR018200 STRS1_21_D01.b1_A034 Shoot tip pitch... 91 9e-024
dbj|BD236706.1| Materials and method for modification of pl... 109 2e-023
gb|BQ697637.1|BQ697637 NXPV_059_A12_F NXPV (Nsf Xylem Plani... 82 2e-023
gb|BI643825.1|BI643825 NXPV_123_D10_F NXPV (Nsf Xylem Plani... 74 2e-023
gb|AW010535.1|AW010535 ST08A08 Pine TriplEx shoot tip libra... 64 3e-023
gb|BQ696964.1|BQ696964 NXPV_047_D10_F NXPV (Nsf Xylem Plani... 88 3e-023
gb|DR744308.1|DR744308 RTCU1_21_D04.g1_A029 Roots plus adde... 94 4e-023
gb|CF392040.1|CF392040 RTDR3_12_E11.g1_A022 Loblolly pine r... 91 4e-023
gb|CF670684.1|CF670684 RTCNT1_51_G12.g1_A029 Root control P... 94 4e-023
gb|CO174357.1|CO174357 NDL1_43_B12.g1_A029 Needles control ... 107 6e-023
gb|DR059730.1|DR059730 RTNIT1_19_A06.g1_A029 Roots minus ni... 91 6e-023
gb|BI643986.1|BI643986 NXPV_133_G02_F NXPV (Nsf Xylem Plani... 70 6e-023
gb|BG673837.1|BG673837 NXPV_075_G03_F NXPV (Nsf Xylem Plani... 98 6e-023
gb|DN632193.1|DN632193 EST983009 Subtracted pine embryo lib... 95 1e-022
gb|DN628319.1|DN628319 EST979135 Subtracted pine embryo lib... 96 1e-022
dbj|BD236694.1| Materials and method for modification of pl... 106 1e-022
dbj|BD236695.1| Materials and method for modification of pl... 106 1e-022
gb|DT629207.1|DT629207 EST1155777 Subtracted pine embryo li... 95 1e-022
gb|DN614133.1|DN614133 EST967183 Subtracted pine embryo lib... 95 1e-022
gb|DN608753.1|DN608753 EST961803 Subtracted pine embryo lib... 95 1e-022
gb|DN609016.1|DN609016 EST962066 Subtracted pine embryo lib... 95 1e-022
gb|DN611788.1|DN611788 EST964838 Subtracted pine embryo lib... 95 1e-022
gb|DN628728.1|DN628728 EST979544 Subtracted pine embryo lib... 95 1e-022
gb|DN614095.1|DN614095 EST967145 Subtracted pine embryo lib... 95 1e-022
gb|DN626328.1|DN626328 EST977144 Subtracted pine embryo lib... 95 1e-022
gb|DN626925.1|DN626925 EST977741 Subtracted pine embryo lib... 95 1e-022
gb|DN627512.1|DN627512 EST978328 Subtracted pine embryo lib... 95 1e-022
gb|DN628350.1|DN628350 EST979166 Subtracted pine embryo lib... 95 1e-022
gb|DN628634.1|DN628634 EST979450 Subtracted pine embryo lib... 95 1e-022
gb|DN629682.1|DN629682 EST980498 Subtracted pine embryo lib... 95 1e-022
gb|DN630256.1|DN630256 EST981072 Subtracted pine embryo lib... 95 1e-022
gb|DN630812.1|DN630812 EST981628 Subtracted pine embryo lib... 95 1e-022
gb|DN631259.1|DN631259 EST982075 Subtracted pine embryo lib... 95 1e-022
gb|DN631418.1|DN631418 EST982234 Subtracted pine embryo lib... 95 1e-022
gb|DN631449.1|DN631449 EST982265 Subtracted pine embryo lib... 95 1e-022
gb|DN631840.1|DN631840 EST982656 Subtracted pine embryo lib... 95 1e-022
gb|DN632460.1|DN632460 EST983276 Subtracted pine embryo lib... 95 1e-022
gb|DN633733.1|DN633733 EST984549 Subtracted pine embryo lib... 95 1e-022
gb|DN627098.1|DN627098 EST977914 Subtracted pine embryo lib... 95 1e-022
gb|DN632165.1|DN632165 EST982981 Subtracted pine embryo lib... 95 1e-022
gb|DN632603.1|DN632603 EST983419 Subtracted pine embryo lib... 95 1e-022
gb|BE049748.1|BE049748 NXNV_143_E01_F Nsf Xylem Normal wood... 71 1e-022
gb|BI397814.1|BI397814 NXPV_108_A07_F NXPV (Nsf Xylem Plani... 69 1e-022
gb|DR081457.1|DR081457 RTFEPL1_29_F10.g1_A029 Roots plus ad... 106 1e-022
gb|DR079774.1|DR079774 RTFEPL1_17_C08.g1_A029 Roots plus ad... 105 2e-022
gb|CX713574.1|CX713574 RTPQ1_10_G07.g1_A032 Roots treated w... 91 3e-022
gb|DN629845.1|DN629845 EST980661 Subtracted pine embryo lib... 94 4e-022
gb|DN633294.1|DN633294 EST984110 Subtracted pine embryo lib... 94 4e-022
gb|DN631607.1|DN631607 EST982423 Subtracted pine embryo lib... 94 5e-022
gb|DN631344.1|DN631344 EST982160 Subtracted pine embryo lib... 94 5e-022
gb|DN632381.1|DN632381 EST983197 Subtracted pine embryo lib... 94 5e-022
gb|DN633618.1|DN633618 EST984434 Subtracted pine embryo lib... 94 5e-022
gb|DN634348.1|DN634348 EST985164 Subtracted pine embryo lib... 94 5e-022
gb|BG039163.1|BG039163 NXSI_095_F10_F NXSI (Nsf Xylem Side ... 72 5e-022
gb|DN608618.1|DN608618 EST961668 Subtracted pine embryo lib... 93 1e-021
gb|DT627604.1|DT627604 EST1156353 Subtracted pine embryo li... 93 1e-021
gb|DT629590.1|DT629590 EST1156160 Subtracted pine embryo li... 93 1e-021
dbj|BD236805.1| Materials and method for modification of pl... 89 2e-021
gb|DN632322.1|DN632322 EST983138 Subtracted pine embryo lib... 92 2e-021
gb|BG625858.1|BG625858 NXPV_066_H06_F NXPV (Nsf Xylem Plani... 82 2e-021
dbj|BD236734.1| Materials and method for modification of pl... 102 2e-021
gb|BQ699488.1|BQ699488 NXRV123_A03_F NXRV (Nsf Xylem Root w... 55 2e-021
gb|CF670693.1|CF670693 RTCNT1_51_H12.g1_A029 Root control P... 94 2e-021
dbj|BD236749.1| Materials and method for modification of pl... 95 2e-021
gb|DR178406.1|DR178406 RTMNUT1_11_C04.g1_A029 Roots minus m... 67 4e-021
gb|DR181900.1|DR181900 RTMNUT1_41_E04.g1_A029 Roots minus m... 91 5e-021
gb|AW289908.1|AW289908 NXNV007G07F Nsf Xylem Normal wood Ve... 67 5e-021
gb|CD026576.1|CD026576 NXNV007G07 Nsf Xylem Normal wood Ver... 67 5e-021
dbj|BD236737.1| Materials and method for modification of pl... 101 5e-021
gb|CF388991.1|CF388991 RTDR2_16_F03.g1_A021 Loblolly pine r... 94 6e-021
gb|AA556437.1|AA556437 292 Loblolly pine C Pinus taeda cDNA... 51 7e-021
gb|CO158592.1|CO158592 FLD1_7_H12.g1_A029 Root flooded Pinu... 49 8e-021
gb|DR011244.1|DR011244 HEAT1_4_B06.g1_A029 Root at 37 C for... 49 8e-021
gb|CF479228.1|CF479228 RTWW3_24_B05.g1_A022 Well-watered lo... 49 8e-021
gb|DR010818.1|DR010818 HEAT1_1_B06.g1_A029 Root at 37 C for... 49 8e-021
gb|DR178750.1|DR178750 RTMNUT1_13_F04.g1_A029 Roots minus m... 49 8e-021
gb|BG040579.1|BG040579 NXSI_112_G07_F NXSI (Nsf Xylem Side ... 59 8e-021
>gb|DR691242.1|DR691242 EST1081328 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAD594 3' end, mRNA sequence
Length = 748
Score = 143 bits (307), Expect = 1e-033
Identities = 53/108 (49%), Positives = 78/108 (72%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP
Sbjct: 203 NSGAGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSNKDEVRDELDFEFLGNRSGQP 382
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
++ TNV+A G G +E + +LWFDPS ++H Y+I+WN +I+ D+
Sbjct: 383 YIVQTNVFALGKGGREQRVNLWFDPSLEFHRYSILWNHYHIVFSVDDI 526
>gb|DT636788.1|DT636788 EST1151719 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGV79 3' end, mRNA sequence
Length = 767
Score = 143 bits (307), Expect = 1e-033
Identities = 53/108 (49%), Positives = 78/108 (72%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP
Sbjct: 203 NSGAGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSNKDEVRDELDFEFLGNRSGQP 382
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
++ TNV+A G G +E + +LWFDPS ++H Y+I+WN +I+ D+
Sbjct: 383 YIVQTNVFALGKGGREQRVNLWFDPSLEFHRYSILWNHYHIVFSVDDI 526
>gb|DR080164.1|DR080164 RTFEPL1_20_F02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_F02_A029 5', mRNA sequence
Length = 725
Score = 141 bits (303), Expect = 4e-033
Identities = 53/108 (49%), Positives = 77/108 (71%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP
Sbjct: 177 NSGAGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSDKDEVRDELDFEFLGNRSGQP 356
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
+ TNV+A G G +E + +LWFDPS ++H Y+I+WN +I+ D+
Sbjct: 357 YTVQTNVFALGKGGREQRVNLWFDPSLEFHRYSILWNHYHIVFSVDDI 500
>gb|DR097898.1|DR097898 STRR1_37_F08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_37_F08_A033 5', mRNA sequence
Length = 627
Score = 141 bits (303), Expect = 4e-033
Identities = 53/108 (49%), Positives = 77/108 (71%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP
Sbjct: 142 NSGAGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSDKDEVRDELDFEFLGNRSGQP 321
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
+ TNV+A G G +E + +LWFDPS ++H Y+I+WN +I+ D+
Sbjct: 322 YTVQTNVFALGKGGREQRVNLWFDPSLEFHRYSILWNHYHIVFSVDDI 465
>gb|DR080099.1|DR080099 RTFEPL1_20_F02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_F02_A029 3', mRNA sequence
Length = 788
Score = 141 bits (302), Expect = 5e-033
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP +
Sbjct: 2 AGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSDKDEVRDELDFEFLGNRSGQPYTV 181
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
TNV+A G G +E + +LWFDPS ++H Y+I+WN +I+ D+
Sbjct: 182 QTNVFALGKGGREQRVNLWFDPSLEFHRYSILWNHYHIVFSVDDI 316
>gb|BX678018.1|BX678018 BX678018 RN Pinus pinaster cDNA clone RN55C01, mRNA sequence
Length = 535
Score = 139 bits (298), Expect = 2e-032
Identities = 52/108 (48%), Positives = 77/108 (71%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ AGF SK QY++G S+ +KL+ G+SAGTV+ FY+SS + RDE+D EF+GN SGQP
Sbjct: 168 NSGAGFASKNQYMFGLVSMNIKLVAGDSAGTVTAFYMSSDKEEVRDELDFEFLGNRSGQP 347
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDL 582
+ TNV+A G G +E + +LWF+PS ++H Y+I+WN +I+ D+
Sbjct: 348 YTVQTNVFALGKGGREQRVNLWFEPSLEFHRYSILWNHYHIVFSVDDI 491
>gb|CO365044.1|CO365044 RTK1_23_G08.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G08_A029 3', mRNA sequence
Length = 853
Score = 105 bits (225), Expect(2) = 3e-032
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1 / +3
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G+G DEIDMEF+GN SGQP +L+TN++ +G KE QF LWFDP++D+H Y+I+
Sbjct: 141 YYLSSTGEGHDEIDMEFLGNVSGQPYILHTNIYVNGSANKEQQFYLWFDPTSDFHNYSIL 320
Query: 544 WNXTNI 561
WN I
Sbjct: 321 WNPQQI 338
Score = 52.4 bits (108), Expect(2) = 3e-032
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF S +++L+G + MKL+ GNSAGTV+ +YLSS
Sbjct: 48 SGFQSYKEFLFGSVDISMKLVPGNSAGTVTTYYLSS 155
>gb|CO365132.1|CO365132 RTK1_23_G08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G08_A029 5', mRNA sequence
Length = 814
Score = 105 bits (225), Expect(2) = 3e-032
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1 / +1
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G+G DEIDMEF+GN SGQP +L+TN++ +G KE QF LWFDP++D+H Y+I+
Sbjct: 334 YYLSSTGEGHDEIDMEFLGNVSGQPYILHTNIYVNGSANKEQQFYLWFDPTSDFHNYSIL 513
Query: 544 WNXTNI 561
WN I
Sbjct: 514 WNPQQI 531
Score = 52.4 bits (108), Expect(2) = 3e-032
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF S +++L+G + MKL+ GNSAGTV+ +YLSS
Sbjct: 241 SGFQSYKEFLFGSVDISMKLVPGNSAGTVTTYYLSS 348
>gb|CX648400.1|CX648400 COLD1_28_A04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_A04_A029 5', mRNA sequence
Length = 762
Score = 105 bits (225), Expect(2) = 3e-032
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1 / +3
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G+G DEIDMEF+GN SGQP +L+TN++ +G KE QF LWFDP++D+H Y+I+
Sbjct: 312 YYLSSTGEGHDEIDMEFLGNVSGQPYILHTNIYVNGSANKEQQFYLWFDPTSDFHNYSIL 491
Query: 544 WNXTNI 561
WN I
Sbjct: 492 WNPQQI 509
Score = 52.4 bits (108), Expect(2) = 3e-032
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF S +++L+G + MKL+ GNSAGTV+ +YLSS
Sbjct: 219 SGFQSYKEFLFGSVDISMKLVPGNSAGTVTTYYLSS 326
>gb|DR389128.1|DR389128 RTHG1_32_D01.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_32_D01_A029 5', mRNA sequence
Length = 736
Score = 105 bits (225), Expect(2) = 3e-032
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1 / +3
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G+G DEIDMEF+GN SGQP +L+TN++ +G KE QF LWFDP++D+H Y+I+
Sbjct: 279 YYLSSTGEGHDEIDMEFLGNVSGQPYILHTNIYVNGSANKEQQFYLWFDPTSDFHNYSIL 458
Query: 544 WNXTNI 561
WN I
Sbjct: 459 WNPQQI 476
Score = 52.4 bits (108), Expect(2) = 3e-032
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF S +++L+G + MKL+ GNSAGTV+ +YLSS
Sbjct: 186 SGFQSYKEFLFGSVDISMKLVPGNSAGTVTTYYLSS 293
>gb|DR018025.1|DR018025 STRS1_20_B09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_B09_A034 3', mRNA sequence
Length = 838
Score = 138 bits (296), Expect = 3e-032
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = +1 / -3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
S +GF SK +YLYG FS +KL+ G+S+GTV+ FYLS+ DE+D EF+GN G+P
Sbjct: 671 SSGSGFASKNKYLYGYFSTRIKLVPGDSSGTVTAFYLSTQQTSKHDEVDFEFLGNKPGKP 492
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
L+TNV+ +G G +E + LWFDP+AD+HTY+++WN IL
Sbjct: 491 HYLSTNVFVNGVGNRESRVRLWFDPTADFHTYSLLWNRHQIL 366
>gb|CF392212.1|CF392212 RTDR3_8_F01.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_8_F01_A022 5', mRNA
sequence
Length = 403
Score = 103 bits (220), Expect(2) = 2e-031
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1 / +3
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G+G DEIDMEF+GN SG+P +L+TN++ +G KE QF LWFDP+ D+H Y+I+
Sbjct: 156 YYLSSTGEGHDEIDMEFLGNVSGEPYILHTNIYVNGSADKEQQFYLWFDPTVDFHNYSIL 335
Query: 544 WNXTNI 561
WN I
Sbjct: 336 WNPQQI 353
Score = 52.4 bits (108), Expect(2) = 2e-031
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF S +++L+G + MKL+ GNSAGTV+ +YLSS
Sbjct: 63 SGFQSYKEFLFGSVDISMKLVPGNSAGTVTTYYLSS 170
>gb|DR014592.1|DR014592 HEAT1_50_A06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_50_A06_A029 5', mRNA sequence
Length = 893
Score = 97.3 bits (206), Expect(2) = 2e-031
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN SG P +L+TN+++ G GK+E QF LWFDP+A +HTY+++W+
Sbjct: 323 SSQGPNHDEIDFEFLGNLSGDPYILHTNIYSQGQGKREQQFYLWFDPTAAFHTYSLLWDA 502
Query: 553 TNI 561
I
Sbjct: 503 QQI 511
Score = 58.3 bits (121), Expect(2) = 2e-031
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ + F SK++YL+G+F +++KL+ GNSAGTV+ FYLSS
Sbjct: 212 TSGSSFQSKKEYLFGKFELQIKLVPGNSAGTVTTFYLSS 328
>gb|CF473607.1|CF473607 RTWW2_3_E07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_E07_A021 5', mRNA sequence
Length = 695
Score = 135 bits (290), Expect = 2e-031
Identities = 46/99 (46%), Positives = 75/99 (75%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF +K Y +G F++++KL+ G+SAG V+ +Y++S D + RDE+D EF+GN SGQP L
Sbjct: 221 SGFQTKNSYRFGFFTMKLKLVAGDSAGVVTTYYMASKDFETRDELDFEFLGNVSGQPYAL 400
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++ +G G++E + +LWFDP+AD+HTY+ +WN ++
Sbjct: 401 QTNIYVNGVGEREQRNELWFDPTADFHTYSFLWNDHQLI 517
>gb|CF670338.1|CF670338 RTCNT1_49_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_49_C11_A029 5', mRNA sequence
Length = 767
Score = 135 bits (290), Expect = 2e-031
Identities = 46/99 (46%), Positives = 75/99 (75%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF +K Y +G F++++KL+ G+SAG V+ +Y++S D + RDE+D EF+GN SGQP L
Sbjct: 289 SGFQTKNSYRFGFFTMKLKLVAGDSAGVVTTYYMASKDFETRDELDFEFLGNVSGQPYAL 468
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++ +G G++E + +LWFDP+AD+HTY+ +WN ++
Sbjct: 469 QTNIYVNGVGEREQRNELWFDPTADFHTYSFLWNDHQLM 585
>gb|CO174759.1|CO174759 NDL1_46_C11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_46_C11_A029 3', mRNA sequence
Length = 577
Score = 135 bits (290), Expect = 2e-031
Identities = 46/99 (46%), Positives = 75/99 (75%)
Frame = +1 / -3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF +K Y +G F++++KL+ G+SAG V+ +Y++S D + RDE+D EF+GN SGQP L
Sbjct: 488 SGFQTKNSYRFGFFTMKLKLVAGDSAGVVTTYYMASKDFETRDELDFEFLGNVSGQPYAL 309
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++ +G G++E + +LWFDP+AD+HTY+ +WN ++
Sbjct: 308 QTNIYVNGVGEREQRNELWFDPTADFHTYSFLWNDHQLI 192
>gb|DR689329.1|DR689329 EST1079415 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACH13 3' end, mRNA sequence
Length = 793
Score = 135 bits (290), Expect = 2e-031
Identities = 46/99 (46%), Positives = 75/99 (75%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF +K Y +G F++++KL+ G+SAG V+ +Y++S D + RDE+D EF+GN SGQP L
Sbjct: 355 SGFQTKNSYRFGFFTMKLKLVAGDSAGVVTTYYMASKDFETRDELDFEFLGNVSGQPYAL 534
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++ +G G++E + +LWFDP+AD+HTY+ +WN ++
Sbjct: 535 QTNIYVNGVGEREQRNELWFDPTADFHTYSFLWNDHQLI 651
>gb|DT635662.1|DT635662 EST1150593 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGJ26 3' end, mRNA sequence
Length = 784
Score = 135 bits (290), Expect = 2e-031
Identities = 46/99 (46%), Positives = 75/99 (75%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF +K Y +G F++++KL+ G+SAG V+ +Y++S D + RDE+D EF+GN SGQP L
Sbjct: 363 SGFQTKNSYRFGFFTMKLKLVAGDSAGVVTTYYMASKDFETRDELDFEFLGNVSGQPYAL 542
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
TN++ +G G++E + +LWFDP+AD+HTY+ +WN ++
Sbjct: 543 QTNIYVNGVGEREQRNELWFDPTADFHTYSFLWNDHQLI 659
>gb|CO201067.1|CO201067 RTCNT2_3_A01.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_3_A01_A029 5', mRNA sequence
Length = 599
Score = 134 bits (288), Expect = 4e-031
Identities = 51/118 (43%), Positives = 78/118 (66%)
Frame = +1 / +1
Query: 211 YDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDG 390
+ DS V + + +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS
Sbjct: 70 FQDSENGQVWHLVLDQNSGSGFKSKYKYRFGWFSMKLKLVPGDSAGVVTAYYMSSNTDMN 249
Query: 391 RDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
RDE+D EF+GN SG+P L TN++A G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 250 RDELDFEFLGNRSGEPYALQTNIYAKGVGGREQRHILWFDPTTEFHTYSILWNSHQIV 423
>dbj|BD236677.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 407
Score = 95.0 bits (201), Expect(2) = 5e-031
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +1 / +1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNI 561
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN + I
Sbjct: 229 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMSQI 396
Score = 59.3 bits (123), Expect(2) = 5e-031
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 106 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 213
>gb|DR687713.1|DR687713 EST1077795 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABV68 3' end, mRNA sequence
Length = 835
Score = 92.7 bits (196), Expect(2) = 7e-031
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G +EH+ LWFDP+ DYH+Y+++WN I+
Sbjct: 437 DEIDFEFLGNKSGEPYILQTNVFTGGKGFREHRIYLWFDPTKDYHSYSVLWNKYQIV 607
Score = 61.1 bits (127), Expect(2) = 7e-031
Identities = 23/36 (63%), Positives = 32/36 (88%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK +YL+G FS+++KL++G+SAGTV+ FYLSS
Sbjct: 314 AGFESKGEYLFGHFSMQIKLVQGDSAGTVTTFYLSS 421
>gb|DT634395.1|DT634395 EST1149326 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG551 3' end, mRNA sequence
Length = 766
Score = 92.7 bits (196), Expect(2) = 7e-031
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G +EH+ LWFDP+ DYH+Y+++WN I+
Sbjct: 445 DEIDFEFLGNKSGEPYILQTNVFTGGKGFREHRIYLWFDPTKDYHSYSVLWNKYQIV 615
Score = 61.1 bits (127), Expect(2) = 7e-031
Identities = 23/36 (63%), Positives = 32/36 (88%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK +YL+G FS+++KL++G+SAGTV+ FYLSS
Sbjct: 322 AGFESKGEYLFGHFSMQIKLVQGDSAGTVTTFYLSS 429
>gb|CF398798.1|CF398798 RTDS3_16_D02.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_16_D02_A022 3', mRNA sequence
Length = 690
Score = 95.0 bits (201), Expect(2) = 7e-031
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +1 / -3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SGQP +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 289 DEIDFEFLGNRSGQPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 119
Score = 58.8 bits (122), Expect(2) = 7e-031
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 412 AGFESKGTYLFGHFSMQIKLVPGDSAGTVTAFYLSS 305
>dbj|BD236773.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 605
Score = 95.0 bits (201), Expect(2) = 7e-031
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SGQP +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 385 DEIDFEFLGNRSGQPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 555
Score = 58.8 bits (122), Expect(2) = 7e-031
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 262 AGFESKGTYLFGHFSMQIKLVPGDSAGTVTAFYLSS 369
>gb|CF400604.1|CF400604 RTWW1_6_E03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_E03_A015 5', mRNA sequence
Length = 709
Score = 133 bits (286), Expect = 8e-031
Identities = 48/102 (47%), Positives = 73/102 (71%)
Frame = +1 / +3
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS RDE+D EF+GN SG+P
Sbjct: 210 NSGSGFKSKYKYRFGWFSMKLKLVPGDSAGVVTAYYMSSNTDMNRDELDFEFLGNRSGEP 389
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
L TN++A G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 390 YALQTNIYAKGVGGREQRHILWFDPTTEFHTYSILWNSHQIV 515
>gb|CF668394.1|CF668394 RTCNT1_36_E12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_E12_A029 3', mRNA sequence
Length = 778
Score = 133 bits (286), Expect = 8e-031
Identities = 48/102 (47%), Positives = 73/102 (71%)
Frame = +1 / -2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS RDE+D EF+GN SG+P
Sbjct: 576 NSGSGFKSKYKYRFGWFSMKLKLVPGDSAGVVTAYYMSSNTDMNRDELDFEFLGNRSGEP 397
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
L TN++A G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 396 YALQTNIYAKGVGGREQRHILWFDPTTEFHTYSILWNSHQIV 271
>gb|CO362633.1|CO362633 RTK1_4_G06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_4_G06_A029 5', mRNA sequence
Length = 703
Score = 133 bits (286), Expect = 8e-031
Identities = 48/102 (47%), Positives = 73/102 (71%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+ +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS RDE+D EF+GN SG+P
Sbjct: 221 NSGSGFKSKYKYRFGWFSMKLKLVPGDSAGVVTAYYMSSNTDMNRDELDFEFLGNRSGEP 400
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
L TN++A G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 401 YALQTNIYAKGVGGREQRHILWFDPTTEFHTYSILWNSHQIV 526
>gb|DR089840.1|DR089840 RTAL1_11_D03.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_11_D03_A029 3', mRNA sequence
Length = 772
Score = 133 bits (286), Expect = 8e-031
Identities = 49/107 (45%), Positives = 75/107 (70%)
Frame = +1 / -3
Query: 244 RLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGN 423
R+ +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS RDE+D EF+GN
Sbjct: 761 RVLDEKSGSGFKSKNKYRFGWFSMKLKLVPGDSAGVVTAYYMSSDTDMNRDELDFEFLGN 582
Query: 424 SSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
SGQP L TN++++G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 581 RSGQPYGLQTNIYSNGVGGREQRHILWFDPTTEFHTYSILWNAHQIV 441
>gb|DR089997.1|DR089997 RTAL1_12_D02.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_D02_A029 3', mRNA sequence
Length = 839
Score = 133 bits (286), Expect = 8e-031
Identities = 49/107 (45%), Positives = 75/107 (70%)
Frame = +1 / -3
Query: 244 RLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGN 423
R+ +GF SK +Y +G FS+++KL+ G+SAG V+ +Y+SS RDE+D EF+GN
Sbjct: 828 RVLDEKSGSGFKSKNKYRFGWFSMKLKLVPGDSAGVVTAYYMSSDTDMNRDELDFEFLGN 649
Query: 424 SSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
SGQP L TN++++G G +E + LWFDP+ ++HTY+I+WN I+
Sbjct: 648 RSGQPYGLQTNIYSNGVGGREQRHILWFDPTTEFHTYSILWNAHQIV 508
>gb|DR014494.1|DR014494 HEAT1_49_G08.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_G08_A029 5', mRNA sequence
Length = 947
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 353 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 523
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 230 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 337
>gb|CO201770.1|CO201770 RTCNT2_8_B11.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_B11_A029 3', mRNA sequence
Length = 880
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / -1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 664 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPAKDYHSYAVLWNMYQIV 494
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 787 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 680
>gb|CO367170.1|CO367170 RTK1_32_D07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_D07_A029 5', mRNA sequence
Length = 821
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 311 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 481
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 188 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 295
>gb|CF667790.1|CF667790 RTCNT1_32_B11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_32_B11_A029 5', mRNA sequence
Length = 805
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 333 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 503
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 210 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 317
>gb|CF400432.1|CF400432 RTWW1_5_B03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_B03_A015 5', mRNA sequence
Length = 803
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 186 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 356
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 63 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 170
>gb|CX714485.1|CX714485 RTPQ1_22_F11.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_22_F11_A032 5', mRNA sequence
Length = 786
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 347 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 517
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 224 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 331
>gb|CO361933.1|CO361933 NDL2_8_B10.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_B10_A029 3', mRNA sequence
Length = 782
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / -3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 438 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 268
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 561 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 454
>gb|CO363086.1|CO363086 RTK1_7_C06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_C06_A029 5', mRNA sequence
Length = 743
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 332 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 502
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 209 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 316
>gb|CF402748.1|CF402748 RTWW1_22_F11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_F11_A015 5', mRNA sequence
Length = 733
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 331 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 501
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 208 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 315
>gb|BX251055.1|BX251055 BX251055 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP044F10 similar to BRASSINOSTEROID REGULATED
PROTEIN BRU1, mRNA sequence
Length = 717
Score = 95.9 bits (203), Expect(2) = 1e-030
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1 / +2
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S DEID EF+GN SGQP +L TNV+ G G++EH+ LWFDP+ DYH+Y ++
Sbjct: 350 YYLSSQTAEHDEIDFEFLGNRSGQPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVL 529
Query: 544 WNXTNIL 564
WN I+
Sbjct: 530 WNMYQIV 550
Score = 57.4 bits (119), Expect(2) = 1e-030
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ +YLSS
Sbjct: 257 AGFESKGTYLFGHFSMQIKLVPGDSAGTVTAYYLSS 364
>gb|CF479386.1|CF479386 RTWW3_23_D10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_23_D10_A022 5', mRNA sequence
Length = 719
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +1
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 349 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 519
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 226 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 333
>gb|BX252135.1|BX252135 BX252135 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP060C10 similar to BRASSINOSTEROID REGULATED
PROTEIN BRU1, mRNA sequence
Length = 707
Score = 95.9 bits (203), Expect(2) = 1e-030
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1 / +2
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S DEID EF+GN SGQP +L TNV+ G G++EH+ LWFDP+ DYH+Y ++
Sbjct: 371 YYLSSQTAEHDEIDFEFLGNRSGQPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVL 550
Query: 544 WNXTNIL 564
WN I+
Sbjct: 551 WNMYQIV 571
Score = 57.4 bits (119), Expect(2) = 1e-030
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ +YLSS
Sbjct: 278 AGFESKGTYLFGHFSMQIKLVPGDSAGTVTAYYLSS 385
>gb|CF387264.1|CF387264 RTDR1_11_H07.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_H07_A015 5', mRNA
sequence
Length = 704
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 300 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 470
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 177 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 284
>gb|CF400467.1|CF400467 RTWW1_5_D01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D01_A015 5', mRNA sequence
Length = 675
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 336 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 506
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 213 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 320
>gb|CF673205.1|CF673205 RTCNT1_76_H09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_76_H09_A029 5', mRNA sequence
Length = 671
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 269 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 439
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 146 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 253
>gb|CF477400.1|CF477400 RTWW3_7_E06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_7_E06_A022 5', mRNA sequence
Length = 655
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 252 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 422
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 129 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 236
>gb|CF400116.1|CF400116 RTWW1_3_C08.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_C08_A015 3', mRNA sequence
Length = 642
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / -2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 284 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 114
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 407 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 300
>gb|DR058835.1|DR058835 RTNIT1_14_E03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E03_A029 3', mRNA sequence
Length = 642
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / -2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 293 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 123
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / -2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 416 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 309
>gb|CF387702.1|CF387702 RTDR1_19_C04.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_C04_A015 5', mRNA
sequence
Length = 634
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 341 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 511
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 218 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 325
>gb|DR090097.1|DR090097 RTAL1_12_E04.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_E04_A029 5', mRNA sequence
Length = 622
Score = 94.1 bits (199), Expect(2) = 1e-030
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +1 / +3
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
DEID EF+GN SG+P +L TNV+ G G++EH+ LWFDP+ DYH+Y ++WN I+
Sbjct: 342 DEIDFEFLGNKSGEPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVLWNMYQIV 512
Score = 59.3 bits (123), Expect(2) = 1e-030
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ FYLSS
Sbjct: 219 AGFESKGTYLFGHFSMQIKLVAGDSAGTVTAFYLSS 326
>gb|BX254990.1|BX254990 BX254990 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP108H04 similar to BRASSINOSTEROID REGULATED
PROTEIN BRU1, mRNA sequence
Length = 612
Score = 95.9 bits (203), Expect(2) = 1e-030
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1 / +3
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S DEID EF+GN SGQP +L TNV+ G G++EH+ LWFDP+ DYH+Y ++
Sbjct: 354 YYLSSQTAEHDEIDFEFLGNRSGQPYILQTNVFTGGKGEREHRIYLWFDPTKDYHSYAVL 533
Query: 544 WNXTNIL 564
WN I+
Sbjct: 534 WNMYQIV 554
Score = 57.4 bits (119), Expect(2) = 1e-030
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
AGF SK YL+G FS+++KL+ G+SAGTV+ +YLSS
Sbjct: 261 AGFESKGTYLFGHFSMQIKLVPGDSAGTVTAYYLSS 368
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 235,712,299
Number of Sequences: 355925
Number of extensions: 2729781
Number of successful extensions: 54274
Number of sequences better than 1.0e-020: 525
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8195309070
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)