TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.3
(792 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO362646.1|CO362646 RTK1_5_A12.b1_A029 Roots minus potas... 315 2e-085
gb|CO365335.1|CO365335 RTK1_25_C04.b1_A029 Roots minus pota... 315 2e-085
gb|CX648134.1|CX648134 COLD1_26_F04.g1_A029 Root cold Pinus... 315 2e-085
gb|DR117521.1|DR117521 RTMG1_7_B02.g1_A029 Roots minus magn... 315 2e-085
gb|DT628616.1|DT628616 EST1155186 Subtracted pine embryo li... 307 6e-083
gb|DN612750.1|DN612750 EST965800 Subtracted pine embryo lib... 307 8e-083
gb|CF664723.1|CF664723 RTCNT1_11_C09.g1_A029 Root control P... 303 1e-081
gb|BQ702215.1|BQ702215 NXSI_126_C02_F NXSI (Nsf Xylem Side ... 300 7e-081
gb|BX251301.1|BX251301 BX251301 Pinus pinaster differenciat... 288 3e-077
gb|CF390389.1|CF390389 RTDR2_19_E10.b1_A021 Loblolly pine r... 286 9e-077
gb|CF390785.1|CF390785 RTDR2_17_H10.g1_A021 Loblolly pine r... 286 9e-077
gb|CO162943.1|CO162943 FLD1_38_A12.g1_A029 Root flooded Pin... 286 9e-077
gb|CO164009.1|CO164009 FLD1_45_E07.b1_A029 Root flooded Pin... 286 9e-077
gb|CO164159.1|CO164159 FLD1_46_E06.b1_A029 Root flooded Pin... 286 9e-077
gb|CX714248.1|CX714248 RTPQ1_19_F08.g1_A032 Roots treated w... 286 9e-077
gb|DR691682.1|DR691682 EST1081769 Normalized pine embryo li... 284 5e-076
gb|CO162341.1|CO162341 FLD1_34_E09.g1_A029 Root flooded Pin... 283 9e-076
gb|DT636926.1|DT636926 EST1151857 Normalized pine embryo li... 273 1e-072
gb|DT631002.1|DT631002 EST1145933 Normalized pine embryo li... 256 4e-071
gb|CO167405.1|CO167405 FLD1_68_F03.g1_A029 Root flooded Pin... 191 2e-068
gb|DR165496.1|DR165496 RTPHOS1_5_A09.g1_A029 Roots minus ph... 191 2e-068
gb|DR181347.1|DR181347 RTMNUT1_38_G12.b2_A029 Roots minus m... 191 2e-068
gb|CO361729.1|CO361729 NDL2_6_E02.g1_A029 Needles control 2... 191 2e-068
gb|DR686844.1|DR686844 EST1076922 Normalized pine embryo li... 189 6e-068
gb|CX649335.1|CX649335 COLD1_34_C03.g1_A029 Root cold Pinus... 254 4e-067
gb|DR690385.1|DR690385 EST1080471 Normalized pine embryo li... 185 8e-067
gb|DT636376.1|DT636376 EST1151307 Normalized pine embryo li... 185 8e-067
gb|CX715121.1|CX715121 RTPQ1_31_B11.g1_A032 Roots treated w... 244 6e-064
gb|DR072816.1|DR072816 RTDK1_28_F08.g1_A029 Roots, dark Pin... 233 1e-060
gb|CO161310.1|CO161310 FLD1_28_B01.b1_A029 Root flooded Pin... 191 7e-059
gb|DR388029.1|DR388029 RTHG1_25_F01.g1_A029 Roots plus adde... 223 1e-057
gb|AW065152.1|AW065152 ST40C10 Pine TriplEx shoot tip libra... 208 2e-057
gb|CF673040.1|CF673040 RTCNT1_75_D10.g1_A029 Root control P... 216 1e-055
gb|DR089158.1|DR089158 RTAL1_6_H06.g1_A029 Roots plus added... 214 6e-055
gb|CO166121.1|CO166121 FLD1_59_B03.g1_A029 Root flooded Pin... 206 2e-052
gb|BX678563.1|BX678563 BX678563 RS Pinus pinaster cDNA clon... 119 1e-049
gb|BF778569.1|BF778569 NXSI_088_C01_F NXSI (Nsf Xylem Side ... 197 1e-049
gb|AW290281.1|AW290281 NXNV017E04F Nsf Xylem Normal wood Ve... 126 4e-049
gb|CD026916.1|CD026916 NXNV017E04 Nsf Xylem Normal wood Ver... 126 4e-049
gb|BM492781.1|BM492781 NXRV_030_H12_F NXRV (Nsf Xylem Root ... 123 3e-048
gb|CV032506.1|CV032506 RTNACL1_8_D03.g1_A029 Roots plus add... 191 5e-048
gb|DR118504.1|DR118504 RTMG1_17_A03.g1_A029 Roots minus mag... 191 6e-048
gb|DN608896.1|DN608896 EST961946 Subtracted pine embryo lib... 183 1e-045
gb|DN610140.1|DN610140 EST963190 Subtracted pine embryo lib... 183 1e-045
gb|DN610212.1|DN610212 EST963262 Subtracted pine embryo lib... 183 1e-045
gb|BF778688.1|BF778688 NXSI_090_G06_F NXSI (Nsf Xylem Side ... 181 7e-045
gb|BG317734.1|BG317734 NXPV_005_A11_F NXPV (Nsf Xylem Plani... 110 2e-044
gb|DR092029.1|DR092029 RTAL1_25_E06.g1_A029 Roots plus adde... 176 2e-043
gb|BE496399.1|BE496399 NXCI_017_D12_F NXCI (Nsf Xylem Compr... 172 2e-042
gb|BF778482.1|BF778482 NXSI_085_C06_F NXSI (Nsf Xylem Side ... 103 2e-041
gb|DR681922.1|DR681922 EST1071997 Normalized pine embryo li... 166 2e-040
gb|BX679459.1|BX679459 BX679459 RS Pinus pinaster cDNA clon... 77 2e-038
gb|DR050795.1|DR050795 RTBOR1_25_E10.g1_A029 Roots plus add... 155 4e-037
gb|DR165420.1|DR165420 RTPHOS1_5_A09.b1_A029 Roots minus ph... 151 5e-036
gb|DR024659.1|DR024659 STRS1_66_C04.g1_A034 Shoot tip pitch... 143 1e-033
gb|CX649763.1|CX649763 COLD1_41_H01.b1_A029 Root cold Pinus... 138 6e-032
gb|CO197932.1|CO197932 GEO1_10_D09.b1_A029 Root gravitropis... 135 4e-031
gb|AW437867.1|AW437867 ST73C09 Pine TriplEx shoot tip libra... 134 6e-031
gb|DN611005.1|DN611005 EST964055 Subtracted pine embryo lib... 132 4e-030
gb|DN612719.1|DN612719 EST965769 Subtracted pine embryo lib... 132 4e-030
gb|DN614701.1|DN614701 EST967751 Subtracted pine embryo lib... 132 4e-030
gb|DT628106.1|DT628106 EST1156855 Subtracted pine embryo li... 132 4e-030
gb|DN611996.1|DN611996 EST965046 Subtracted pine embryo lib... 128 4e-029
gb|DN612064.1|DN612064 EST965114 Subtracted pine embryo lib... 128 4e-029
gb|DN612927.1|DN612927 EST965977 Subtracted pine embryo lib... 128 4e-029
gb|DN614765.1|DN614765 EST967815 Subtracted pine embryo lib... 127 7e-029
gb|AW056617.1|AW056617 ST53F10 Pine TriplEx shoot tip libra... 126 2e-028
gb|DR102278.1|DR102278 STRR1_79_G05.g1_A033 Stem Response R... 87 5e-027
gb|CF671022.1|CF671022 RTCNT1_54_D12.b1_A029 Root control P... 121 6e-027
gb|DR117514.1|DR117514 RTMG1_7_A07.g1_A029 Roots minus magn... 120 1e-026
gb|DR089072.1|DR089072 RTAL1_6_H06.b1_A029 Roots plus added... 114 9e-025
gb|AW870271.1|AW870271 NXNV_128_F09_F Nsf Xylem Normal wood... 80 8e-023
gb|CF672296.1|CF672296 RTCNT1_62_D06.g1_A029 Root control P... 104 1e-021
gb|DN609845.1|DN609845 EST962895 Subtracted pine embryo lib... 101 7e-021
>gb|CO362646.1|CO362646 RTK1_5_A12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_5_A12_A029 3', mRNA sequence
Length = 809
Score = 315 bits (683), Expect = 2e-085
Identities = 107/158 (67%), Positives = 127/158 (80%)
Frame = +3 / -2
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 541 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 362
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 361 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGG 182
Query: 678 XENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 181 RDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 68
Score = 183 bits (394), Expect = 1e-045
Identities = 90/158 (56%), Positives = 96/158 (60%)
Frame = -3 / +3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 69 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 248
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 249 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QC 428
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 429 LQSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 542
Score = 136 bits (291), Expect = 2e-031
Identities = 67/150 (44%), Positives = 96/150 (64%)
Frame = -2 / +2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 68 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 247
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 248 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 427
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IK+ IA S ASP IM I+ F+
Sbjct: 428 STIKDLIATWRSNTASPFIM*ATIL*ISFV 517
Score = 117 bits (250), Expect = 1e-025
Identities = 61/145 (42%), Positives = 79/145 (54%)
Frame = -1 / +1
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 67 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 246
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 247 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDN 426
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQ+ HC+ L GIS YNV H+
Sbjct: 427 VYNQRPHCNMAL*YGISVYNVSNHT 501
Score = 101 bits (216), Expect = 5e-021
Identities = 62/140 (44%), Positives = 74/140 (52%)
Frame = +1 / -3
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+ LI D TMK RI L R M F + H V L
Sbjct: 501 SMVAHIINGDAVLERHVAMRSLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 322
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 321 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 142
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 141 IRLC*RIVILV*KEQCTTTV 82
>gb|CO365335.1|CO365335 RTK1_25_C04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_25_C04_A029 3', mRNA sequence
Length = 827
Score = 315 bits (683), Expect = 2e-085
Identities = 107/158 (67%), Positives = 127/158 (80%)
Frame = +3 / -1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 488 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 309
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 308 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGG 129
Query: 678 XENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 128 RDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 15
Score = 183 bits (394), Expect = 1e-045
Identities = 90/158 (56%), Positives = 96/158 (60%)
Frame = -3 / +1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 16 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 195
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 196 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QC 375
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 376 LQSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 489
Score = 138 bits (296), Expect = 5e-032
Identities = 68/150 (45%), Positives = 96/150 (64%)
Frame = -2 / +3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 15 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 194
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 195 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 374
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IKN IA S ASP IM I+ F+
Sbjct: 375 STIKNLIATWRSNTASPFIM*ATIL*ISFV 464
Score = 118 bits (253), Expect = 4e-026
Identities = 62/145 (42%), Positives = 79/145 (54%)
Frame = -1 / +2
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 14 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 193
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 194 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDN 373
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQK HC+ L GIS YNV H+
Sbjct: 374 VYNQKPHCNMAL*YGISVYNVSNHT 448
Score = 105 bits (224), Expect = 4e-022
Identities = 63/140 (45%), Positives = 75/140 (53%)
Frame = +1 / -2
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+FLI D TMK RI L R M F + H V L
Sbjct: 448 SMVAHIINGDAVLERHVAMRFLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 269
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 268 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 89
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 88 IRLC*RIVILV*KEQCTTTV 29
>gb|CX648134.1|CX648134 COLD1_26_F04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_F04_A029 5', mRNA sequence
Length = 797
Score = 315 bits (683), Expect = 2e-085
Identities = 107/158 (67%), Positives = 127/158 (80%)
Frame = +3 / +3
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 156 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 335
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 336 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGG 515
Query: 678 XENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 516 RDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 629
Score = 183 bits (394), Expect = 1e-045
Identities = 90/158 (56%), Positives = 96/158 (60%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 628 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 449
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 448 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QC 269
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 268 LQSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 155
Score = 136 bits (291), Expect = 2e-031
Identities = 67/150 (44%), Positives = 96/150 (64%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 629 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 450
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 449 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 270
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IK+ IA S ASP IM I+ F+
Sbjct: 269 STIKDLIATWRSNTASPFIM*ATIL*ISFV 180
Score = 117 bits (250), Expect = 1e-025
Identities = 61/145 (42%), Positives = 79/145 (54%)
Frame = -1 / -3
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 630 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 451
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 450 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDN 271
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQ+ HC+ L GIS YNV H+
Sbjct: 270 VYNQRPHCNMAL*YGISVYNVSNHT 196
Score = 101 bits (216), Expect = 5e-021
Identities = 62/140 (44%), Positives = 74/140 (52%)
Frame = +1 / +1
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+ LI D TMK RI L R M F + H V L
Sbjct: 196 SMVAHIINGDAVLERHVAMRSLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 375
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 376 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 555
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 556 IRLC*RIVILV*KEQCTTTV 615
>gb|DR117521.1|DR117521 RTMG1_7_B02.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_B02_A029 5', mRNA sequence
Length = 783
Score = 315 bits (683), Expect = 2e-085
Identities = 107/158 (67%), Positives = 127/158 (80%)
Frame = +3 / +3
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 243 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 422
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 423 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGG 602
Query: 678 XENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 603 RDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 716
Score = 183 bits (394), Expect = 1e-045
Identities = 90/158 (56%), Positives = 96/158 (60%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 715 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 536
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 535 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QC 356
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 355 LQSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 242
Score = 138 bits (296), Expect = 5e-032
Identities = 68/150 (45%), Positives = 96/150 (64%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ D TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 716 LKTDGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 537
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 536 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 357
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IK+ IA S ASP IM I+ F+
Sbjct: 356 STIKDLIATWRSNTASPFIM*ATIL*ISFV 267
Score = 118 bits (253), Expect = 4e-026
Identities = 62/145 (42%), Positives = 79/145 (54%)
Frame = -1 / -1
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T++R DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 717 TQNRRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 538
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 537 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDN 358
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQ+ HC+ L GIS YNV H+
Sbjct: 357 VYNQRPHCNMAL*YGISVYNVSNHT 283
Score = 104 bits (221), Expect = 1e-021
Identities = 64/145 (44%), Positives = 76/145 (52%)
Frame = +1 / +1
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+ LI D TMK RI L R M F + H V L
Sbjct: 283 SMVAHIINGDAVLERHVAMRSLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 462
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 463 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 642
Query: 718 IQLR*RIVMHVLKGRCIMTVQSASS 792
I+L *RIV+ V K +C TV S S
Sbjct: 643 IRLC*RIVILV*KEQCTTTVPSVLS 717
>gb|DT628616.1|DT628616 EST1155186 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD002 5' end, mRNA sequence
Length = 602
Score = 307 bits (665), Expect = 6e-083
Identities = 105/156 (67%), Positives = 124/156 (79%)
Frame = +3 / -1
Query: 324 DDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHE 503
+ EK +KG + YGC HY+RRCRIRAPCCNE FDCRHCHNE KNS+ + +RH++P H
Sbjct: 500 ESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEAFDCRHCHNEAKNSVNVKPQQRHDVP*HN 321
Query: 504 VQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXE 683
+Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+ +
Sbjct: 320 LQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRD 141
Query: 684 NFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 140 NFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 33
Score = 179 bits (386), Expect = 2e-044
Identities = 87/153 (56%), Positives = 94/153 (61%)
Frame = -3 / +1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 34 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 213
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T +G+SCL L EF SL QC
Sbjct: 214 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCQGTSCLCWGLTLTEFFASL*QC 393
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS 332
QSK SLQ GAL+RHL L*C P C P S+FS
Sbjct: 394 LQSKASLQHGALIRHLRL*CEQPYCKYPLSSFS 492
Score = 139 bits (298), Expect = 2e-032
Identities = 68/150 (45%), Positives = 96/150 (64%)
Frame = -2 / +3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 33 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 212
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 213 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 392
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IK IA R S ASP IM I+ F+
Sbjct: 393 STIKGLIATRRSNTASPFIM*ATIL*ISFV 482
Score = 117 bits (250), Expect = 1e-025
Identities = 61/145 (42%), Positives = 79/145 (54%)
Frame = -1 / +2
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 32 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 211
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 212 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVKEHHVSVGA*H*QNSLLHCDN 391
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQ+ HC+ L GIS YNV H+
Sbjct: 392 VYNQRPHCNTAL*YGISVYNVSNHT 466
Score = 101 bits (215), Expect = 7e-021
Identities = 62/140 (44%), Positives = 74/140 (52%)
Frame = +1 / -2
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+ LI D TMK RI L R M F + H V L
Sbjct: 466 SMVAHIINGDAVLERRVAMRPLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 287
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 286 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 107
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 106 IRLC*RIVILV*KEQCTTTV 47
>gb|DN612750.1|DN612750 EST965800 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABJ58, mRNA sequence
Length = 605
Score = 307 bits (664), Expect = 8e-083
Identities = 105/153 (68%), Positives = 123/153 (80%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
EK +KG + YGC HY+RRCRIRAPCCNE FDCRHCHNE KNS+ + +RH++P H +Q+
Sbjct: 118 EKLDKGYLQYGCSHYKRRCRIRAPCCNEAFDCRHCHNEAKNSVNVKPQQRHDVP*HNLQR 297
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+ +NFF
Sbjct: 298 VICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNFF 477
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 478 HCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 576
Score = 179 bits (386), Expect = 2e-044
Identities = 87/153 (56%), Positives = 94/153 (61%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 575 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 396
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T +G+SCL L EF SL QC
Sbjct: 395 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCQGTSCLCWGLTLTEFFASL*QC 216
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS 332
QSK SLQ GAL+RHL L*C P C P S+FS
Sbjct: 215 LQSKASLQHGALIRHLRL*CEQPYCKYPLSSFS 117
Score = 139 bits (298), Expect = 2e-032
Identities = 68/150 (45%), Positives = 96/150 (64%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 576 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 397
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 396 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 217
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFL 342
S IK IA R S ASP IM I+ F+
Sbjct: 216 STIKGLIATRRSNTASPFIM*ATIL*ISFV 127
Score = 117 bits (250), Expect = 1e-025
Identities = 61/145 (42%), Positives = 79/145 (54%)
Frame = -1 / -2
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 577 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 398
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 397 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVKEHHVSVGA*H*QNSLLHCDN 218
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQ+ HC+ L GIS YNV H+
Sbjct: 217 VYNQRPHCNTAL*YGISVYNVSNHT 143
Score = 101 bits (215), Expect = 7e-021
Identities = 62/140 (44%), Positives = 74/140 (52%)
Frame = +1 / +2
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+ LI D TMK RI L R M F + H V L
Sbjct: 143 SMVAHIINGDAVLERRVAMRPLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 322
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 323 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 502
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 503 IRLC*RIVILV*KEQCTTTV 562
>gb|CF664723.1|CF664723 RTCNT1_11_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_11_C09_A029 5', mRNA sequence
Length = 673
Score = 303 bits (655), Expect = 1e-081
Identities = 102/146 (69%), Positives = 120/146 (82%)
Frame = +3 / +1
Query: 354 MHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCG 533
+ YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PRH +Q+V+CSLC
Sbjct: 4 LQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPRHNLQRVICSLCD 183
Query: 534 TEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGC 713
TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+ +NFFHC KCGC
Sbjct: 184 TEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGC 363
Query: 714 CYSIALKNSHACVEGAMHHDCPICFE 791
CYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 364 CYSIMLKDCHPCVEGAMHHNCPVCFE 441
Score = 173 bits (372), Expect = 1e-042
Identities = 84/145 (57%), Positives = 89/145 (61%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 440 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 261
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 260 SLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QC 81
Query: 430 RQSKISLQQGALMRHLLL*CGHP*C 356
QSK SLQ GAL+RHL L*C P C
Sbjct: 80 LQSKTSLQHGALIRHLRL*CEQPYC 6
Score = 138 bits (295), Expect = 6e-032
Identities = 66/140 (47%), Positives = 92/140 (65%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 441 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 262
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
A T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +
Sbjct: 261 *LASFTKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTM 82
Query: 431 SAIKNFIAARSSYAASPSIM 372
S IKN IA S ASP IM
Sbjct: 81 STIKNLIATWRSNTASPFIM 22
Score = 118 bits (253), Expect = 4e-026
Identities = 62/145 (42%), Positives = 79/145 (54%)
Frame = -1 / -1
Query: 792 TRSRLDSHDASPLQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRR 613
T+++ DS A L H D S N+N HI +SGRN P +FYI+HI S AV R+H +
Sbjct: 442 TQNKRDSCGALLLLHKDDNPST*SNNNNHI*SSGRNYPCHQFYIYHIHHSGIAVLRYHHQ 263
Query: 612 RVCTNHRSISPCKHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGS 433
C H+S SPC+ +*Y L QCH ++ P E H S * NS HC +
Sbjct: 262 IACKFHKSTSPCRRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDN 83
Query: 432 VGNQKFHCSKELLCGISFYNVDTHS 358
V NQK HC+ L GIS YNV H+
Sbjct: 82 VYNQKPHCNMAL*YGISVYNVSNHT 8
Score = 105 bits (224), Expect = 4e-022
Identities = 63/140 (45%), Positives = 75/140 (53%)
Frame = +1 / +2
Query: 358 TMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLYAHCVAL 537
+M HII GDA E AM+FLI D TMK RI L R M F + H V L
Sbjct: 8 SMVAHIINGDAVLERHVAMRFLIVDIVTMKQRILSMLSPNRDMMFLDTISKGSFVHFVTL 187
Query: 538 NRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTVQNVDVA 717
++ K V AWG+T V A+ M+S NS+ T DV YVE G ISST NV V
Sbjct: 188 SKMFIKCVLTVASAWGSTFVKLASYLMMISQNSNTTVMDVVYVELVAGIISSTALNVVVV 367
Query: 718 IQLR*RIVMHVLKGRCIMTV 777
I+L *RIV+ V K +C TV
Sbjct: 368 IRLC*RIVILV*KEQCTTTV 427
>gb|BQ702215.1|BQ702215 NXSI_126_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_126_C02 5' similar to Arabidopsis thaliana
sequence At5g22920 PGPD14 protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 300 bits (650), Expect = 7e-081
Identities = 104/157 (66%), Positives = 124/157 (78%)
Frame = +3 / +1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 73 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 252
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 253 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCXICRTGG 432
Query: 678 XENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICF 788
+NFFHC KCGC SI LK+ H CVEGAMHH+C +CF
Sbjct: 433 RDNFFHCFKCGCXXSIMLKDCHPCVEGAMHHNCXVCF 543
Score = 176 bits (379), Expect = 2e-043
Identities = 88/157 (56%), Positives = 94/157 (59%)
Frame = -3 / -2
Query: 787 KQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKS 608
KQ Q CIAPST * F+ IE Q PH +QWKK S Q YCC E SSS S
Sbjct: 542 KQTXQLWCIAPSTQG*QSFNIIEXQQPHLKQWKKLSLPPVLHIXHPSQWYCCFEISSSNS 363
Query: 607 LHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCR 428
L QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC
Sbjct: 362 LQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QCL 183
Query: 427 QSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 182 QSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 72
Score = 131 bits (281), Expect = 5e-030
Identities = 65/145 (44%), Positives = 91/145 (62%)
Frame = -2 / -1
Query: 776 TVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQT 597
TV++H F T MTILQ N T+TF VEEI+P + STY TS+ V+LLF DII++ A
Sbjct: 531 TVVVHCSFYTRMTILQHNRXXTTTFKAVEEIIPATSSTYXTSITVVLLF*DIIIK*LASF 352
Query: 596 TEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKN 417
T+V PHA+ ++T+L ++L S T+* + L ++ M L +N + IL FIV +S IK+
Sbjct: 351 TKVLPHADATVNTHLMNILLSVTK*TNDPLEIVSRNIMSLLGLNIDRILCFIVTMSTIKD 172
Query: 416 FIAARSSYAASPSIMWTPIVHYPFL 342
IA S ASP IM I+ F+
Sbjct: 171 LIATWRSNTASPFIM*ATIL*ISFV 97
Score = 106 bits (226), Expect = 2e-022
Identities = 56/133 (42%), Positives = 69/133 (51%)
Frame = -1 / -3
Query: 756 LQHMHDYSSAQLNSNIHILNSGRNSPSLRFYIFHIRCSDTAV*RHHRRRVCTNHRSISPC 577
L H D S N HI +SGRN P +FYI HI S AV R+H + C H+S SPC
Sbjct: 511 LLHKDDNPST*SXXNNHI*SSGRNYPCHQFYIXHIHHSGIAVLRYHHQIACKFHKSTSPC 332
Query: 576 KHRN*YILVAPPVQCHTMSIQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKEL 397
+ +*Y L QCH ++ P E H S * NS HC +V NQ+ HC+ L
Sbjct: 331 RRHS*YTLDEHLAQCHKVNK*PFGDCVEEHHVSVGA*H*QNSLLHCDNVYNQRPHCNMAL 152
Query: 396 LCGISFYNVDTHS 358
GIS YNV H+
Sbjct: 151 *YGISVYNVSNHT 113
>gb|BX251301.1|BX251301 BX251301 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP047H07, mRNA sequence
Length = 675
Score = 288 bits (624), Expect = 3e-077
Identities = 98/148 (66%), Positives = 117/148 (79%)
Frame = +3 / +1
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSL 527
G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++V+CSL
Sbjct: 169 GCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRKVICSL 348
Query: 528 CGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKC 707
C TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFFHC KC
Sbjct: 349 CRTEQDVQQTCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGNDNFFHCYKC 528
Query: 708 GCCYSIALKNSHACVEGAMHHDCPICFE 791
GCCYSI LK+ H CVE AMHH+CP+CFE
Sbjct: 529 GCCYSIQLKDCHPCVEKAMHHNCPVCFE 612
Score = 173 bits (372), Expect = 1e-042
Identities = 82/148 (55%), Positives = 91/148 (61%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ IE*QHPH QWKK S Q YCC E+SSSK
Sbjct: 611 SKHTGQLWCIAFSTQGWQSFNCIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 432
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 431 KLHFSQKYFPIQTPQVTQVC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 252
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 251 LQSKTSLQHGALI*HLRR*CEHPYCMHP 168
Score = 120 bits (256), Expect = 1e-026
Identities = 58/146 (39%), Positives = 92/146 (63%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ +ATSTF TVEEI+ + S STS+ V+LLF ++++
Sbjct: 612 LKTHRAVVVHCFFHTRVAILQLYRVATSTFITVEEIIVATSSANSTSITVVLLF*VLVIK 433
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A T+V H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 432 EIAFFTKVLSHTNTTSNAGLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 253
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVH 354
+K+FI RS Y SP+++ T I+H
Sbjct: 252 PTVKDFITTRSPYLTSPAVV*TSILH 175
>gb|CF390389.1|CF390389 RTDR2_19_E10.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_19_E10_A021 3', mRNA
sequence
Length = 667
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / -3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 530 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 351
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 350 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 171
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 170 HCYKCGCCYAIELKDCHPCVEKAMHHNCPVCFE 72
Score = 170 bits (366), Expect = 1e-041
Identities = 81/148 (54%), Positives = 91/148 (61%)
Frame = -3 / +1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F++I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 73 SKHTGQLWCIAFSTQGWQSFNSIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 252
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 253 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 432
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 433 LQSKTSLQHGALIWHLRR*CEHPYCMHP 516
Score = 123 bits (263), Expect = 2e-027
Identities = 61/151 (40%), Positives = 95/151 (62%)
Frame = -2 / +3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 72 LKTHRAVVVHCFFHTRVAILQFDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 251
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 252 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 431
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI S Y ASP+++ T I+H +K
Sbjct: 432 PTVKDFITTWSPYLASPAVV*TSILHASLIK 524
Score = 101 bits (216), Expect = 5e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / -1
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 523 LIKDACNMDVHTTAGDAK*GLHVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 344
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 343 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 164
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 163 INVDVATLSN*RIATLVWKKQCTTT 89
>gb|CF390785.1|CF390785 RTDR2_17_H10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_H10_A021 5', mRNA
sequence
Length = 798
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 73 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 252
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 253 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 432
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 433 HCYKCGCCYAIELKDCHPCVEKAMHHNCPVCFE 531
Score = 170 bits (366), Expect = 1e-041
Identities = 81/148 (54%), Positives = 91/148 (61%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F++I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 530 SKHTGQLWCIAFSTQGWQSFNSIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 351
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 350 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 171
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 170 LQSKTSLQHGALIWHLRR*CEHPYCMHP 87
Score = 123 bits (263), Expect = 2e-027
Identities = 61/151 (40%), Positives = 95/151 (62%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 531 LKTHRAVVVHCFFHTRVAILQFDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 352
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 351 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 172
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI S Y ASP+++ T I+H +K
Sbjct: 171 PTVKDFITTWSPYLASPAVV*TSILHASLIK 79
Score = 101 bits (216), Expect = 5e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / +2
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 80 LIKDACNMDVHTTAGDAK*GLHVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 259
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 260 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 439
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 440 INVDVATLSN*RIATLVWKKQCTTT 514
>gb|CO162943.1|CO162943 FLD1_38_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_A12_A029 5', mRNA sequence
Length = 804
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 195 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 374
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 375 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 554
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 555 HCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 653
Score = 168 bits (362), Expect = 4e-041
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 652 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 473
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 472 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 293
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 292 LQSKTSLQHGALIWHLRR*CEHPYCMHP 209
Score = 127 bits (272), Expect = 9e-029
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 653 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 474
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 473 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 294
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP+++ T I+H +K
Sbjct: 293 PTVKDFITTRSPYLASPAVV*TSILHASLIK 201
Score = 102 bits (217), Expect = 4e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / +1
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 202 LIKDACNMDVHTTAGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 381
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 382 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 561
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 562 INVDVATLSN*RIATLVWKKQCTTT 636
>gb|CO164009.1|CO164009 FLD1_45_E07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_E07_A029 3', mRNA sequence
Length = 909
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / -3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 706 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 527
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 526 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 347
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 346 HCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 248
Score = 168 bits (362), Expect = 4e-041
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = -3 / +3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 249 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 428
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 429 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 608
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 609 LQSKTSLQHGALIWHLRR*CEHPYCMHP 692
Score = 127 bits (272), Expect = 9e-029
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = -2 / +2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 248 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 427
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 428 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 607
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP+++ T I+H +K
Sbjct: 608 PTVKDFITTRSPYLASPAVV*TSILHASLIK 700
Score = 102 bits (217), Expect = 4e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / -1
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 699 LIKDACNMDVHTTAGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 520
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 519 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 340
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 339 INVDVATLSN*RIATLVWKKQCTTT 265
>gb|CO164159.1|CO164159 FLD1_46_E06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_E06_A029 3', mRNA sequence
Length = 911
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / -3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 708 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 529
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 528 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 349
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 348 HCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 250
Score = 168 bits (362), Expect = 4e-041
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = -3 / +2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 251 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 430
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 431 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 610
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 611 LQSKTSLQHGALIWHLRR*CEHPYCMHP 694
Score = 127 bits (272), Expect = 9e-029
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = -2 / +1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 250 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 429
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 430 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 609
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP+++ T I+H +K
Sbjct: 610 PTVKDFITTRSPYLASPAVV*TSILHASLIK 702
Score = 102 bits (217), Expect = 4e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / -1
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 701 LIKDACNMDVHTTAGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 522
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 521 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 342
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 341 INVDVATLSN*RIATLVWKKQCTTT 267
>gb|CX714248.1|CX714248 RTPQ1_19_F08.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_19_F08_A032 5', mRNA sequence
Length = 693
Score = 286 bits (620), Expect = 9e-077
Identities = 97/153 (63%), Positives = 119/153 (77%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 95 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 274
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 275 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 454
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 455 HCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 553
Score = 168 bits (362), Expect = 4e-041
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 552 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 373
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 372 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 193
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 192 LQSKTSLQHGALIWHLRR*CEHPYCMHP 109
Score = 127 bits (272), Expect = 9e-029
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 553 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 374
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 373 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 194
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP+++ T I+H +K
Sbjct: 193 PTVKDFITTRSPYLASPAVV*TSILHASLIK 101
Score = 102 bits (217), Expect = 4e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / +3
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 102 LIKDACNMDVHTTAGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 281
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 282 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 461
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 462 INVDVATLSN*RIATLVWKKQCTTT 536
>gb|DR691682.1|DR691682 EST1081769 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB54 3' end, mRNA sequence
Length = 582
Score = 284 bits (615), Expect = 5e-076
Identities = 96/153 (62%), Positives = 118/153 (77%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HY RRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 7 DTLNQGCMQYGCSHYHRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 186
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 187 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 366
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 367 HCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 465
Score = 168 bits (362), Expect = 4e-041
Identities = 81/148 (54%), Positives = 90/148 (60%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 464 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 285
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 284 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 105
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 104 LQSKTSLQHGALIWHLRW*CEHPYCMHP 21
Score = 126 bits (269), Expect = 2e-028
Identities = 62/151 (41%), Positives = 95/151 (62%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 465 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 286
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 285 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 106
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP ++ T I+H +K
Sbjct: 105 PTVKDFITTRSPYLASPVVV*TSILHASLIK 13
Score = 102 bits (217), Expect = 4e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / +2
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 14 LIKDACNMDVHTTTGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 193
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 194 VHFVELNKMFSKTALLVVFVWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 373
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 374 INVDVATLSN*RIATLVWKKQCTTT 448
>gb|CO162341.1|CO162341 FLD1_34_E09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_E09_A029 5', mRNA sequence
Length = 858
Score = 283 bits (613), Expect = 9e-076
Identities = 97/153 (63%), Positives = 118/153 (77%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 209 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 388
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGV MGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 389 VICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 568
Query: 693 HCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
HC KCGCCYSI LK+ H CVE AMHH+CP+CFE
Sbjct: 569 HCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFE 667
Score = 170 bits (365), Expect = 1e-041
Identities = 81/148 (54%), Positives = 91/148 (61%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ IE*QHPH QWKK S Q YCC E+SSSK
Sbjct: 666 SKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 487
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP++TPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 486 KLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 307
Query: 430 RQSKISLQQGALMRHLLL*CGHP*CIIP 347
QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 306 LQSKTSLQHGALIWHLRR*CEHPYCMHP 223
Score = 127 bits (271), Expect = 1e-028
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 667 LKTHRAVVVHCFFHTRVAILQLDRVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 488
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 487 EIAFFTEVLSHRNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 308
Query: 431 SAIKNFIAARSSYAASPSIMWTPIVHYPFLK 339
+K+FI RS Y ASP+++ T I+H +K
Sbjct: 307 PTVKDFITTRSPYLASPAVV*TSILHASLIK 215
Score = 101 bits (216), Expect = 5e-021
Identities = 61/145 (42%), Positives = 71/145 (48%)
Frame = +1 / +3
Query: 340 LRKG*CTMGVHIIEGDAA*ELLAAMKFLIADTATMKLRIPLKLIK*RGMNFHAMKCSRLY 519
L K C M VH GDA * L MK L M+ +I I M + AMK RL
Sbjct: 216 LIKDACNMDVHTTAGDAK*GLRVVMKSLTVGIVIMRPKIQWMSIHLTDMMYRAMKFERLS 395
Query: 520 AHCVALNRRCDKYVSIAVFAWGNTSVVCANSSTMMSLNSSITATDVEYVESEGGRISSTV 699
H V LN+ K + VF W +TSV A S + NS+ T TDVE+ E ISSTV
Sbjct: 396 VHFVELNKMFSKTALLVVFLWESTSVKNAISLMTRTQNSNTTVTDVEFAELAAKIISSTV 575
Query: 700 QNVDVAIQLR*RIVMHVLKGRCIMT 774
NVDVA *RI V K +C T
Sbjct: 576 INVDVATLSN*RIATLVWKKQCTTT 650
>gb|DT636926.1|DT636926 EST1151857 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGX65 3' end, mRNA sequence
Length = 844
Score = 273 bits (590), Expect = 1e-072
Identities = 92/142 (64%), Positives = 112/142 (78%)
Frame = +3 / +3
Query: 366 CPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQE 545
C HY RRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++V+CSLC TEQ+
Sbjct: 3 CSHYHRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRKVICSLCRTEQD 182
Query: 546 VRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSI 725
V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFFHC KCGCCY+I
Sbjct: 183 VQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYAI 362
Query: 726 ALKNSHACVEGAMHHDCPICFE 791
LK+ H CVE AMHH+CP+CFE
Sbjct: 363 QLKDCHPCVEKAMHHNCPVCFE 428
Score = 160 bits (345), Expect = 8e-039
Identities = 78/142 (54%), Positives = 86/142 (60%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 427 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 248
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP+QTPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 247 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 68
Query: 430 RQSKISLQQGALMRHLLL*CGH 365
QSK SLQ GAL+ HL *C H
Sbjct: 67 LQSKTSLQHGALIWHLRW*CEH 2
Score = 118 bits (253), Expect = 4e-026
Identities = 59/142 (41%), Positives = 90/142 (63%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 428 LKTHRAVVVHCFFHTRVAILQLDSVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 249
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 248 EIAFFTEVLSHTNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 69
Query: 431 SAIKNFIAARSSYAASPSIMWT 366
+K+FI RS Y ASP ++ T
Sbjct: 68 PTVKDFITTRSPYLASPVVV*T 3
>gb|DT631002.1|DT631002 EST1145933 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF376 3' end, mRNA sequence
Length = 775
Score = 256 bits (553), Expect(2) = 4e-071
Identities = 87/141 (61%), Positives = 107/141 (75%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 313 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 492
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 493 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 672
Query: 693 HCSKCGCCYSIALKNSHACVE 755
HC KCGCCY+I L + H CVE
Sbjct: 673 HCHKCGCCYAIELNDCHPCVE 735
Score = 158 bits (340), Expect = 4e-038
Identities = 74/136 (54%), Positives = 84/136 (61%)
Frame = -3 / -3
Query: 754 STHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQ 575
ST F++I *QHPH QWKK S Q YCC E+SSSK LH QKYFP+Q
Sbjct: 734 STQGWQSFNSIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSKKLHFSQKYFPIQ 555
Query: 574 TPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGAL 395
TPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC QSK SLQ GAL
Sbjct: 554 TPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QCLQSKTSLQHGAL 375
Query: 394 MRHLLL*CGHP*CIIP 347
+ HL *C HP C+ P
Sbjct: 374 IWHLRR*CEHPYCMHP 327
Score = 122 bits (261), Expect = 3e-027
Identities = 58/139 (41%), Positives = 90/139 (64%)
Frame = -2 / -2
Query: 755 FNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHA 576
F+T + I+Q + +ATSTF TVEEI+ + S STSV V+LLF ++++E A TEV H
Sbjct: 735 FHTRVAIIQFDSVATSTFMTVEEIIFAASSANSTSVTVVLLF*VLVIKEIAFFTEVLSHT 556
Query: 575 NTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSS 396
NT + L ++LFS+T+* NL +FMA M + +++ + I I+ + +K+FI RS
Sbjct: 555 NTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTMPTVKDFITTRSP 376
Query: 395 YAASPSIMWTPIVHYPFLK 339
Y ASP+++ T I+H +K
Sbjct: 375 YLASPAVV*TSILHASLIK 319
Score = 32.7 bits (65), Expect(2) = 4e-071
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 759 AMHHDCPICFE 791
AMHH+CP+CFE
Sbjct: 738 AMHHNCPVCFE 770
>gb|CO167405.1|CO167405 FLD1_68_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_F03_A029 5', mRNA sequence
Length = 873
Score = 191 bits (411), Expect(2) = 2e-068
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 260 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 439
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 440 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 583
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 582 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 403
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 402 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGSS 277
Score = 89.0 bits (188), Expect(2) = 2e-068
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 128 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 259
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 246 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 142
>gb|DR165496.1|DR165496 RTPHOS1_5_A09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_A09_A029 5', mRNA sequence
Length = 830
Score = 191 bits (411), Expect(2) = 2e-068
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 208 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 387
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 388 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 531
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 530 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 351
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 350 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGSS 225
Score = 94.1 bits (199), Expect(2) = 5e-021
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ +WTV+ H + +LQ N IAT+TF +E+I+P S Y+T +ILL DII++
Sbjct: 531 LKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIK 352
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFM 483
E A+ TE+ PH NT + T L +L S T+ N +F++W+ M
Sbjct: 351 ELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELM 223
Score = 89.0 bits (188), Expect(2) = 2e-068
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 76 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 207
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 194 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 90
Score = 27.2 bits (53), Expect(2) = 5e-021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2 / -3
Query: 446 FIVAVSAIKNFIAARSSYAASPSIMWTPIVH 354
FIV V I + IA R S +M T +VH
Sbjct: 189 FIVTVPTIIDLIATRGPNPTSSPVMGTTMVH 97
>gb|DR181347.1|DR181347 RTMNUT1_38_G12.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_G12_A029 3', mRNA sequence
Length = 808
Score = 191 bits (411), Expect(2) = 2e-068
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / -1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 469 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 290
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 289 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 146
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / +3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 147 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 326
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 327 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGSS 452
Score = 94.1 bits (199), Expect(2) = 5e-021
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = -2 / +2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ +WTV+ H + +LQ N IAT+TF +E+I+P S Y+T +ILL DII++
Sbjct: 146 LKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIK 325
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFM 483
E A+ TE+ PH NT + T L +L S T+ N +F++W+ M
Sbjct: 326 ELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELM 454
Score = 89.0 bits (188), Expect(2) = 2e-068
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / -1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 601 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 470
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / +3
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 483 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 587
Score = 27.2 bits (53), Expect(2) = 5e-021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2 / +2
Query: 446 FIVAVSAIKNFIAARSSYAASPSIMWTPIVH 354
FIV V I + IA R S +M T +VH
Sbjct: 488 FIVTVPTIIDLIATRGPNPTSSPVMGTTMVH 580
>gb|CO361729.1|CO361729 NDL2_6_E02.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_E02_A029 5', mRNA sequence
Length = 777
Score = 191 bits (411), Expect(2) = 2e-068
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 197 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 376
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 377 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 520
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 519 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 340
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 339 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGSS 214
Score = 89.0 bits (188), Expect(2) = 2e-068
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 65 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 196
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 183 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 79
>gb|DR686844.1|DR686844 EST1076922 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABK47 3' end, mRNA sequence
Length = 710
Score = 189 bits (407), Expect(2) = 6e-068
Identities = 64/108 (59%), Positives = 81/108 (75%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHE PR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 360 DPLLRHEFPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 539
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 540 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 683
Score = 97.7 bits (207), Expect(2) = 2e-026
Identities = 49/102 (48%), Positives = 53/102 (51%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 682 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 503
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + G+S
Sbjct: 502 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGNS 377
Score = 89.0 bits (188), Expect(2) = 6e-068
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 228 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 359
Score = 41.8 bits (85), Expect(2) = 2e-026
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 346 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 242
>gb|CX649335.1|CX649335 COLD1_34_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_34_C03_A029 5', mRNA sequence
Length = 699
Score = 254 bits (550), Expect = 4e-067
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +3 / +1
Query: 387 CRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCIN 566
C+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++V+CSLC TEQ+V+Q C+
Sbjct: 1 CQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRKVICSLCRTEQDVQQNCVT 180
Query: 567 CGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHA 746
CGV MGKYFC C FDD+ SKQQYHC+ +NFFHC KCGCCYSI LK+ H
Sbjct: 181 CGVSMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYSIQLKDCHP 360
Query: 747 CVEGAMHHDCPICFE 791
CVE AMHH+CP+CFE
Sbjct: 361 CVEKAMHHNCPVCFE 405
Score = 152 bits (327), Expect = 2e-036
Identities = 73/133 (54%), Positives = 82/133 (61%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ IE*QHPH QWKK S Q YCC E+SSSK
Sbjct: 404 SKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 225
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP++TPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 224 KLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 45
Query: 430 RQSKISLQQGALM 392
QSK SLQ GAL+
Sbjct: 44 LQSKTSLQHGALI 6
Score = 111 bits (238), Expect = 5e-024
Identities = 56/135 (41%), Positives = 85/135 (62%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ V++H F+T + ILQ + +ATSTF TVEEI+ + S STSV V+LLF ++++
Sbjct: 405 LKTHRAVVVHCFFHTRVAILQLDRVATSTFITVEEIIFAASSANSTSVTVVLLF*VLVIK 226
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAV 432
E A TEV H NT + L ++LFS+T+* NL +FMA M + +++ + I I+ +
Sbjct: 225 EIAFFTEVLSHRNTTSNAVLLNILFSSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTM 46
Query: 431 SAIKNFIAARSSYAA 387
+K+FI RS Y A
Sbjct: 45 PTVKDFITTRSPYLA 1
>gb|DR690385.1|DR690385 EST1080471 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACU46 3' end, mRNA sequence
Length = 912
Score = 185 bits (399), Expect(2) = 8e-067
Identities = 64/108 (59%), Positives = 81/108 (75%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+ SLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 286 DPLLRHELPRYKVERVIRSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 465
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 466 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 609
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 608 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 429
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 428 NLHVEQKYSPILTPQFSQTCLTFCSVSQRERITRSTLYLGSS 303
Score = 94.1 bits (199), Expect(2) = 5e-021
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ +WTV+ H + +LQ N IAT+TF +E+I+P S Y+T +ILL DII++
Sbjct: 609 LKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIK 430
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFM 483
E A+ TE+ PH NT + T L +L S T+ N +F++W+ M
Sbjct: 429 ELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELM 301
Score = 89.0 bits (188), Expect(2) = 8e-067
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 154 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 285
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 272 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 168
Score = 27.2 bits (53), Expect(2) = 5e-021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2 / -1
Query: 446 FIVAVSAIKNFIAARSSYAASPSIMWTPIVH 354
FIV V I + IA R S +M T +VH
Sbjct: 267 FIVTVPTIIDLIATRGPNPTSSPVMGTTMVH 175
>gb|DT636376.1|DT636376 EST1151307 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGR13 3' end, mRNA sequence
Length = 842
Score = 185 bits (399), Expect(2) = 8e-067
Identities = 64/108 (59%), Positives = 81/108 (75%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+ SLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 294 DPLLRHELPRYKVERVIRSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 473
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 474 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 617
Score = 99.1 bits (210), Expect(2) = 7e-027
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / -2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 616 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 437
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 436 NLHVEQKYSPILTPQFSQTCLTFCSVSQRERITRSTLYLGSS 311
Score = 94.1 bits (199), Expect(2) = 5e-021
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = -2 / -1
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ +WTV+ H + +LQ N IAT+TF +E+I+P S Y+T +ILL DII++
Sbjct: 617 LKTNWTVVAH*VLYAGVALLQTNRIATTTFLAMEKIIPASYPAYATISTMILLL*DIIIK 438
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFM 483
E A+ TE+ PH NT + T L +L S T+ N +F++W+ M
Sbjct: 437 ELAR*TEILPHFNTTVFTNLLDILLSVTERTNNPFNFVSWELM 309
Score = 89.0 bits (188), Expect(2) = 8e-067
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 162 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 293
Score = 41.8 bits (85), Expect(2) = 7e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 280 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 176
Score = 27.2 bits (53), Expect(2) = 5e-021
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2 / -1
Query: 446 FIVAVSAIKNFIAARSSYAASPSIMWTPIVH 354
FIV V I + IA R S +M T +VH
Sbjct: 275 FIVTVPTIIDLIATRGPNPTSSPVMGTTMVH 183
>gb|CX715121.1|CX715121 RTPQ1_31_B11.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_31_B11_A032 5', mRNA sequence
Length = 540
Score = 244 bits (527), Expect = 6e-064
Identities = 83/129 (64%), Positives = 101/129 (78%)
Frame = +3 / +1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 154 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 333
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXX 677
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+S+QQYHC+
Sbjct: 334 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISEQQYHCDGCGICRTGG 513
Query: 678 XENFFHCSK 704
+NFFHC K
Sbjct: 514 RDNFFHCFK 540
Score = 144 bits (308), Expect = 1e-033
Identities = 71/128 (55%), Positives = 76/128 (59%)
Frame = -3 / -2
Query: 700 EQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNE 521
+QWKK S Q YCC E SSS SL QKYFPMQTPQLIHT TSCSV +E
Sbjct: 536 KQWKKLSLPPVLHIPHPSQWYCCSEISSSNSLQVSQKYFPMQTPQLIHT**TSCSVSQSE 357
Query: 520 HTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 341
T RG+SCL L EF SL QC QSK SLQ GAL+RHL L*C P C P S
Sbjct: 356 QMTLWRLCRGTSCLCWGLTLTEFFASL*QCLQSKTSLQHGALIRHLRL*CEQPYCKYPLS 177
Query: 340 NFS*SSGF 317
+FS S F
Sbjct: 176 SFSKLSAF 153
Score = 108 bits (231), Expect = 4e-023
Identities = 53/121 (43%), Positives = 76/121 (62%)
Frame = -2 / -1
Query: 704 F*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSATQ 525
F VEEI+P + STY+TS+ V+LLF DII++ A T+V PHA+ ++T+L ++L S T+
Sbjct: 540 FKAVEEIIPATSSTYTTSITVVLLF*DIIIK*LASFTKVLPHADATVNTHLMNILLSVTK 361
Query: 524 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPF 345
* + L ++ M L +N + IL FIV +S IKN IA S ASP IM I+ F
Sbjct: 360 *TNDPLEIVSRNIMSLLGLNIDRILCFIVTMSTIKNLIATWRSNTASPFIM*ATIL*ISF 181
Query: 344 L 342
+
Sbjct: 180 V 178
Score = 100 bits (214), Expect = 9e-021
Identities = 50/114 (43%), Positives = 63/114 (55%)
Frame = -1 / -3
Query: 699 NSGRNSPSLRFYIFHIRCSDTAV*RHHRRRVCTNHRSISPCKHRN*YILVAPPVQCHTMS 520
+SGRN P +FYI+HI S AV R+H + C H+S SPC+ +*Y L QCH ++
Sbjct: 535 SSGRNYPCHQFYIYHIHHSGIAVLRYHHQIACKFHKSTSPCRRHS*YTLDEHLAQCHKVN 356
Query: 519 IQPAALHGVEVHASSFYQF*WNS*FHCGSVGNQKFHCSKELLCGISFYNVDTHS 358
P E H S * NS HC +V NQK HC+ L GIS YNV H+
Sbjct: 355 K*PFGDCVEEHHVSVGA*H*QNSLLHCDNVYNQKPHCNMAL*YGISVYNVSNHT 194
>gb|DR072816.1|DR072816 RTDK1_28_F08.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_F08_A029 5', mRNA sequence
Length = 527
Score = 233 bits (503), Expect = 1e-060
Identities = 79/128 (61%), Positives = 97/128 (75%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 142 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 321
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ S QQYHC+ +NFF
Sbjct: 322 VICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDS*QQYHCDGCGICRTGGKDNFF 501
Query: 693 HCSKCGCC 716
HC KCGCC
Sbjct: 502 HCYKCGCC 525
Score = 152 bits (327), Expect = 2e-036
Identities = 70/124 (56%), Positives = 78/124 (62%)
Frame = -3 / -1
Query: 718 *QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSC 539
*QHPH QWKK S Q YCC E+SSSK LH QKYFP+QTPQ+ C TSC
Sbjct: 527 *QHPHL*QWKKLSLPPVLQIPHPSQWYCCYESSSSKKLHFSQKYFPIQTPQVTQFC*TSC 348
Query: 538 SVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP* 359
SV +E T TSWRG+SCL +EFL SL QC QSK SLQ GAL+ HL *C HP
Sbjct: 347 SVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHPY 168
Query: 358 CIIP 347
C+ P
Sbjct: 167 CMHP 156
Score = 111 bits (237), Expect = 6e-024
Identities = 53/126 (42%), Positives = 80/126 (63%)
Frame = -2 / -3
Query: 716 ATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLF 537
ATSTF TVEEI+ + S STSV V+LL ++++E A TEV H NT + L ++LF
Sbjct: 525 ATSTFITVEEIIFAASSANSTSVTVVLLL*VLVIKEIAFFTEVLSHTNTTSNAVLLNILF 346
Query: 536 SATQ*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIV 357
S+T+* NL +FMA M + +++ + I I+ + +K+FI RS Y ASP+++ T I+
Sbjct: 345 SSTK*TDNLSNFMARYIMSVKWMDIH*IFGLIMTMPTVKDFITTRSPYLASPAVV*TSIL 166
Query: 356 HYPFLK 339
H +K
Sbjct: 165 HASLIK 148
>gb|CO161310.1|CO161310 FLD1_28_B01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_B01_A029 3', mRNA sequence
Length = 916
Score = 191 bits (411), Expect(2) = 7e-059
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / -2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 843 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 664
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 663 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 520
Score = 99.1 bits (210), Expect(2) = 8e-023
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3 / +2
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ I ST F *Q PHF QWKK S Q*YCC E SSSK
Sbjct: 521 SKQTGQLWPIEFSTQGWPFCKLTV*QQPHFWQWKKLSRPPTLHMPQSAQ*YCCFEISSSK 700
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSS 485
+LH QKY P+ TPQ TC T CSV E T T + GSS
Sbjct: 701 NLHVEQKYSPILTPQFSQTCLTFCSVSQREQITRSTLYLGSS 826
Score = 57.0 bits (118), Expect(2) = 7e-059
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3 / -2
Query: 393 IRAPCCNEIFDCRHCHNETKNSIK 464
IRAPCCNEI+DCRHCHNE + +K
Sbjct: 915 IRAPCCNEIYDCRHCHNEAMSHLK 844
Score = 28.1 bits (55), Expect(2) = 8e-023
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 451 LVSLWQCRQSKISLQQGA 398
+ SL QC QS ISLQQGA
Sbjct: 857 MASL*QCLQS*ISLQQGA 910
>gb|DR388029.1|DR388029 RTHG1_25_F01.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_25_F01_A029 5', mRNA sequence
Length = 783
Score = 223 bits (481), Expect = 1e-057
Identities = 79/140 (56%), Positives = 98/140 (70%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 199 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 378
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFF 692
V+CSLC TEQ+V+Q C+ CGV MGKYFC C FDD+ SKQQYHC+ +NFF
Sbjct: 379 VICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDNFF 558
Query: 693 HCSKCGCCYSIALKNSHACV 752
HC KC A S C+
Sbjct: 559 HCYKCDLLVQCAPNLSVICL 618
Score = 142 bits (304), Expect = 4e-033
Identities = 65/120 (54%), Positives = 74/120 (61%)
Frame = -3 / -2
Query: 706 HFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPH 527
H QWKK S Q YCC E+SSSK LH QKYFP++TPQ+ C TSCSV
Sbjct: 572 HL*QWKKLSLPPVLQIPHPSQWYCCFESSSSKKLHFSQKYFPIETPQVTQFC*TSCSVLQ 393
Query: 526 NEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+E T TSWRG+SCL +EFL SL QC QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 392 SEQITFRTSWRGTSCLSSGWTSIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHPYCMHP 213
Score = 107 bits (229), Expect = 8e-023
Identities = 51/123 (41%), Positives = 78/123 (63%)
Frame = -2 / -1
Query: 707 TF*TVEEILPPSDSTYSTSVAVILLFRDIIVEEFAQTTEVFPHANTAIDTYLSHLLFSAT 528
TF TVEEI+ + S STSV V+LLF ++++E A TEV H NT + L ++LFS+T
Sbjct: 573 TFITVEEIIFAASSANSTSVTVVLLF*VLVIKEIAFFTEVLSHRNTTSNAVLLNILFSST 394
Query: 527 Q*AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYP 348
+* NL +FMA M + +++ + I I+ + +K+FI RS Y ASP+++ T I+H
Sbjct: 393 K*TDNLSNFMARYIMSVKWMDIH*IFGLIMTMPTVKDFITTRSPYLASPAVV*TSILHAS 214
Query: 347 FLK 339
+K
Sbjct: 213 LIK 205
>gb|AW065152.1|AW065152 ST40C10 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST40C10, mRNA sequence
Length = 588
Score = 208 bits (448), Expect(2) = 2e-057
Identities = 73/119 (61%), Positives = 91/119 (76%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 153 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 332
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENF 689
V+CSLC TEQ+V+Q C+ CGV MGKYFC CK FDD+ SKQQYHC+ +NF
Sbjct: 333 VICSLCRTEQDVQQNCVTCGVSMGKYFCEKCKFFDDEDSKQQYHCDGCGXCKTGGKDNF 509
Score = 133 bits (285), Expect(2) = 4e-032
Identities = 59/100 (59%), Positives = 69/100 (69%)
Frame = -3 / -3
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q YCC E+SSSK+LH QKYFP++TPQ+ C TSCSV +E T TSWRG+SCL
Sbjct: 466 QWYCCFESSSSKNLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGW 287
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+EFL SL QC QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 286 TSIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHPYCMHP 167
Score = 35.4 bits (71), Expect(2) = 2e-057
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 687 FFHCSKCGCCYSIALKNSHACVEGAMH 767
F H K CY I LK+ CVE AMH
Sbjct: 506 FLHWXKXXFCYXIQLKDCXPCVEKAMH 586
Score = 24.9 bits (48), Expect(2) = 4e-032
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 766 CIAPSTHA*LFFSAIE*QHPHFEQWKKF 683
CIA ST F+ + *Q H QW+ +
Sbjct: 585 CIAFSTQGWQSFNWMX*QXXHXXQWRNY 502
>gb|CF673040.1|CF673040 RTCNT1_75_D10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_D10_A029 5', mRNA sequence
Length = 553
Score = 216 bits (467), Expect = 1e-055
Identities = 73/105 (69%), Positives = 88/105 (83%)
Frame = +3 / +2
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 239 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 418
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSK 632
H +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SK
Sbjct: 419 HNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISK 553
Score = 125 bits (267), Expect = 5e-028
Identities = 62/104 (59%), Positives = 66/104 (63%)
Frame = -3 / -2
Query: 628 ETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFL 449
E SSS SL QKYFPMQTPQLIHT TSCSV +E T RG+SCL L EF
Sbjct: 549 EISSSNSLQVSQKYFPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFF 370
Query: 448 VSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
SL QC QSK SLQ GAL+RHL L*C P C P S+FS S F
Sbjct: 369 ASL*QCLQSKTSLQHGALIRHLRL*CEQPYCKYPLSSFSKLSAF 238
>gb|DR089158.1|DR089158 RTAL1_6_H06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_H06_A029 5', mRNA sequence
Length = 749
Score = 214 bits (462), Expect = 6e-055
Identities = 74/120 (61%), Positives = 91/120 (75%)
Frame = +3 / +2
Query: 432 HCHNETKNSIKIDKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKL 611
HCHNE KNS+ + + RH++PRHEV++V+CSLC TEQ+V+Q C+ CGV MGKYFC C
Sbjct: 2 HCHNEAKNSMDVHPLDRHDVPRHEVRKVICSLCRTEQDVQQNCVTCGVSMGKYFCEKCNF 181
Query: 612 FDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
FDD+ SKQQYHC+ +NFFHC KCGCCYSI LK+ H CVE AMHH+CP+CFE
Sbjct: 182 FDDEDSKQQYHCDGCGICRTGGKDNFFHCYKCGCCYSIQLKDCHPCVEKAMHHNCPVCFE 361
Score = 134 bits (288), Expect = 6e-031
Identities = 64/120 (53%), Positives = 72/120 (60%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ IE*QHPH QWKK S Q YCC E+SSSK
Sbjct: 360 SKHTGQLWCIAFSTQGWQSFNWIE*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 181
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQC 431
LH QKYFP++TPQ+ C TSCSV +E T TSWRG+SCL +EFL SL QC
Sbjct: 180 KLHFSQKYFPIETPQVTQFC*TSCSVLQSEQITFRTSWRGTSCLSSGWTSIEFLASL*QC 1
>gb|CO166121.1|CO166121 FLD1_59_B03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_B03_A029 5', mRNA sequence
Length = 835
Score = 206 bits (444), Expect = 2e-052
Identities = 71/102 (69%), Positives = 83/102 (81%)
Frame = +3 / +1
Query: 486 ELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXX 665
++PRH +Q+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+
Sbjct: 1 DVPRHNLQRVICSLCDTEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGIC 180
Query: 666 XXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 181 RTGGRDNFFHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 306
Score = 120 bits (256), Expect = 1e-026
Identities = 57/101 (56%), Positives = 60/101 (59%)
Frame = -3 / -3
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 305 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 126
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGS 488
SL QKYFPMQTPQLIHT TSCSV E T RG+
Sbjct: 125 SLQVSQKYFPMQTPQLIHT**TSCSVSQREQMTLWRLCRGT 3
Score = 102 bits (217), Expect = 4e-021
Identities = 44/89 (49%), Positives = 64/89 (71%)
Frame = -2 / -2
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 306 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 127
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ 525
A T+V PHA+ ++T+L ++L S T+
Sbjct: 126 *LASFTKVLPHADATVNTHLMNILLSVTK 40
>gb|BX678563.1|BX678563 BX678563 RS Pinus pinaster cDNA clone RS11C01, mRNA sequence
Length = 368
Score = 119 bits (255), Expect(3) = 1e-049
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG YFC CK FDDD+SKQQYHC
Sbjct: 126 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGDYFCSTCKFFDDDISKQQYHC 305
Query: 648 N 650
+
Sbjct: 306 D 308
Score = 87.7 bits (185), Expect(3) = 1e-049
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +3 / +3
Query: 348 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 9 GNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 125
Score = 28.6 bits (56), Expect(3) = 1e-049
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 653 MWNM*NRREGEFLPLFKMW 709
+W+M RR G F PL +MW
Sbjct: 312 LWHMQGRRPG*FFPLPEMW 368
>gb|BF778569.1|BF778569 NXSI_088_C01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_088_C01 5' similar to Arabidopsis thaliana
sequence At5g22920 PGPD14 protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 197 bits (424), Expect = 1e-049
Identities = 67/106 (63%), Positives = 81/106 (76%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHEV++
Sbjct: 158 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEVRK 337
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 650
+CSLC TEQ+V C CGVCM KYFC C FDD SKQQYHC+
Sbjct: 338 XICSLCRTEQDVXXNCXXCGVCMXKYFCEKCNFFDDXXSKQQYHCD 475
Score = 121 bits (258), Expect = 8e-027
Identities = 56/100 (56%), Positives = 62/100 (62%)
Frame = -3 / -1
Query: 646 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 467
Q YCC E SSK LH QKYF +QTPQ TSCSV +E TSWRG+SCL
Sbjct: 471 QWYCCFEXXSSKKLHFSQKYFXIQTPQXXQFXXTSCSVLQSEQIXFRTSWRGTSCLSSGW 292
Query: 466 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+EFL SL QC QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 291 TSIEFLASL*QCLQSKTSLQHGALIWHLRR*CEHPYCMHP 172
>gb|AW290281.1|AW290281 NXNV017E04F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV017E04 5', mRNA sequence
Length = 469
Score = 126 bits (270), Expect(2) = 4e-049
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 242 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 421
Query: 648 NXXXXXXXXXXENFFH 695
+NFFH
Sbjct: 422 ADCGICRVGGRDNFFH 469
Score = 89.0 bits (188), Expect(2) = 4e-049
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 110 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 241
Score = 78.5 bits (165), Expect(2) = 9e-021
Identities = 35/70 (50%), Positives = 38/70 (54%)
Frame = -3 / -2
Query: 694 WKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHT 515
WKK S Q*YCC E SSSK+LH QKY P+ TPQ TC T CSV E
Sbjct: 468 WKKLSRPPTLHMPQSAQ*YCCFEISSSKNLHVEQKYSPILTPQFSQTCLTFCSVSQREQI 289
Query: 514 TCCTSWRGSS 485
T T + GSS
Sbjct: 288 TRSTLYLGSS 259
Score = 41.8 bits (85), Expect(2) = 9e-021
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 228 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 124
>gb|CD026916.1|CD026916 NXNV017E04 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV017E04 5' similar to Arabidopsis thaliana sequence
At5g18650 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 469
Score = 126 bits (270), Expect(2) = 4e-049
Identities = 46/76 (60%), Positives = 56/76 (73%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 242 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 421
Query: 648 NXXXXXXXXXXENFFH 695
+NFFH
Sbjct: 422 ADCGICRVGGRDNFFH 469
Score = 89.0 bits (188), Expect(2) = 4e-049
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 110 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 241
Score = 78.5 bits (165), Expect(2) = 9e-021
Identities = 35/70 (50%), Positives = 38/70 (54%)
Frame = -3 / -2
Query: 694 WKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHT 515
WKK S Q*YCC E SSSK+LH QKY P+ TPQ TC T CSV E
Sbjct: 468 WKKLSRPPTLHMPQSAQ*YCCFEISSSKNLHVEQKYSPILTPQFSQTCLTFCSVSQREQI 289
Query: 514 TCCTSWRGSS 485
T T + GSS
Sbjct: 288 TRSTLYLGSS 259
Score = 41.8 bits (85), Expect(2) = 9e-021
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 228 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 124
>gb|BM492781.1|BM492781 NXRV_030_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_030_H12 5' similar to Arabidopsis thaliana
sequence At5g18650 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 488
Score = 123 bits (263), Expect(2) = 3e-048
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +3 / +3
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 249 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 428
Query: 648 NXXXXXXXXXXENFFH 695
+ FFH
Sbjct: 429 AXCXICKVXXXDXFFH 476
Score = 89.0 bits (188), Expect(2) = 3e-048
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 117 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 248
Score = 81.3 bits (171), Expect(2) = 1e-021
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = -3 / -2
Query: 697 QWKKFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 518
QWKK S Q*YCC E SSSK+LH QKY P+ TPQ TC T CSV E
Sbjct: 478 QWKKXSXXXTLHMXQXAQ*YCCFEISSSKNLHVEQKYSPILTPQFSQTCLTFCSVSQREQ 299
Query: 517 TTCCTSWRGSS 485
T T + GSS
Sbjct: 298 ITRSTLYLGSS 266
Score = 41.8 bits (85), Expect(2) = 1e-021
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -3 / -2
Query: 451 LVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
+ SL QC QS ISLQQGA +RH LL* P I P
Sbjct: 235 MASL*QCLQS*ISLQQGARIRHRLL*WAQPWSIFP 131
>gb|CV032506.1|CV032506 RTNACL1_8_D03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_D03_A029 5', mRNA sequence
Length = 388
Score = 191 bits (412), Expect = 5e-048
Identities = 67/94 (71%), Positives = 76/94 (80%)
Frame = +3 / +3
Query: 510 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENF 689
+V+CSLC TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+ +NF
Sbjct: 3 RVICSLCDTEQDVFQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNF 182
Query: 690 FHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
FHC KCGCCYSI LK+ H CVEGAMHH+CP+CFE
Sbjct: 183 FHCFKCGCCYSIMLKDCHPCVEGAMHHNCPVCFE 284
Score = 121 bits (259), Expect = 6e-027
Identities = 55/93 (59%), Positives = 59/93 (63%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 283 SKQTGQLWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 104
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTT 512
SL QKYFPMQTPQLIHT +TSCSV +E T
Sbjct: 103 SLQVSQKYFPMQTPQLIHT*KTSCSVSQSEQMT 5
Score = 103 bits (219), Expect = 2e-021
Identities = 45/90 (50%), Positives = 65/90 (72%)
Frame = -2 / -3
Query: 791 LEADWTVMMHRPFNTCMTILQRN*IATSTF*TVEEILPPSDSTYSTSVAVILLFRDIIVE 612
L+ + TV++H F T MTILQ N I T+TF VEEI+P + STY+TS+ V+LLF DII++
Sbjct: 284 LKTNGTVVVHCSFYTRMTILQHNRITTTTFKAVEEIIPATSSTYTTSITVVLLF*DIIIK 105
Query: 611 EFAQTTEVFPHANTAIDTYLSHLLFSATQ* 522
A T+V PHA+ ++T+L ++L S T+*
Sbjct: 104 *LASFTKVLPHADATVNTHLKNILLSVTK* 15
>gb|DR118504.1|DR118504 RTMG1_17_A03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_A03_A029 5', mRNA sequence
Length = 641
Score = 191 bits (411), Expect = 6e-048
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = +3 / +2
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK FDDD+SKQQYHC
Sbjct: 35 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKFFDDDISKQQYHC 214
Query: 648 NXXXXXXXXXXENFFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
+NFFHC KCGCCY+++L+ H CVE +M H+CP+CFE
Sbjct: 215 ADCGICRVGGRDNFFHCQKCGCCYTVSLQKGHPCVENSMGHNCPVCFE 358
>gb|DN608896.1|DN608896 EST961946 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAA575, mRNA sequence
Length = 367
Score = 183 bits (394), Expect = 1e-045
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = +3 / +1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 97 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 276
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 587
H +Q+V+CSLC TEQ+V QVCINCGVCMGK
Sbjct: 277 HNLQRVICSLCDTEQDVHQVCINCGVCMGK 366
Score = 107 bits (229), Expect = 8e-023
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = -3 / -3
Query: 586 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 407
FPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC QSK SLQ
Sbjct: 365 FPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QCLQSKTSLQ 186
Query: 406 QGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
GAL+RHL L*C P C P S+FS S F
Sbjct: 185 HGALIRHLRL*CEQPYCKYPLSSFSKLSAF 96
>gb|DN610140.1|DN610140 EST963190 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAM09, mRNA sequence
Length = 367
Score = 183 bits (394), Expect = 1e-045
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = +3 / -1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 271 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 92
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 587
H +Q+V+CSLC TEQ+V QVCINCGVCMGK
Sbjct: 91 HNLQRVICSLCDTEQDVHQVCINCGVCMGK 2
Score = 107 bits (229), Expect = 8e-023
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = -3 / +3
Query: 586 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 407
FPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC QSK SLQ
Sbjct: 3 FPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QCLQSKTSLQ 182
Query: 406 QGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
GAL+RHL L*C P C P S+FS S F
Sbjct: 183 HGALIRHLRL*CEQPYCKYPLSSFSKLSAF 272
>gb|DN610212.1|DN610212 EST963262 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAM94, mRNA sequence
Length = 367
Score = 183 bits (394), Expect = 1e-045
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = +3 / -1
Query: 318 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 497
N + EK +KG + YGC HY+RRCRIRAPCCNE+FDCRHCHNE KNS+ + +RH++PR
Sbjct: 271 NAESLEKLDKGYLQYGCSHYKRRCRIRAPCCNEVFDCRHCHNEAKNSVNVKPQQRHDVPR 92
Query: 498 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 587
H +Q+V+CSLC TEQ+V QVCINCGVCMGK
Sbjct: 91 HNLQRVICSLCDTEQDVHQVCINCGVCMGK 2
Score = 107 bits (229), Expect = 8e-023
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = -3 / +3
Query: 586 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 407
FPMQTPQLIHT TSCSV +E T RG+SCL L EF SL QC QSK SLQ
Sbjct: 3 FPMQTPQLIHT**TSCSVSQSEQMTLWRLCRGTSCLCWGLTLTEFFASL*QCLQSKTSLQ 182
Query: 406 QGALMRHLLL*CGHP*CIIPFSNFS*SSGF 317
GAL+RHL L*C P C P S+FS S F
Sbjct: 183 HGALIRHLRL*CEQPYCKYPLSSFSKLSAF 272
>gb|BF778688.1|BF778688 NXSI_090_G06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_090_G06 5' similar to Arabidopsis thaliana
sequence At5g22920 PGPD14 protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 454
Score = 181 bits (389), Expect = 7e-045
Identities = 60/96 (62%), Positives = 74/96 (77%)
Frame = +3 / +3
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQ 512
+ +G M YGC HYRRRC+IRAPCCNE+FDCRHCHNE KNS+ + + RH++PRHE +
Sbjct: 159 DTLNQGCMQYGCSHYRRRCQIRAPCCNEVFDCRHCHNEAKNSMDVHPLDRHDVPRHEXXK 338
Query: 513 VVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDD 620
V+CSLC TEQ+V+ C+ CGVCMGKY C C FDD
Sbjct: 339 VICSLCRTEQDVQXXCVTCGVCMGKYXCEKCNFFDD 446
Score = 111 bits (237), Expect = 6e-024
Identities = 52/94 (55%), Positives = 59/94 (62%)
Frame = -3 / -1
Query: 628 ETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFL 449
E SSK LH Q YFP+QTPQ+ TSCSV +E T SWRG+SCL +EFL
Sbjct: 454 EXXSSKKLHFSQXYFPIQTPQVTQXX*TSCSVLQSEQITFXXSWRGTSCLSSGWTSIEFL 275
Query: 448 VSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIP 347
SL QC QSK SLQ GAL+ HL *C HP C+ P
Sbjct: 274 ASL*QCLQSKTSLQHGALIWHLRR*CEHPYCMHP 173
>gb|BG317734.1|BG317734 NXPV_005_A11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_005_A11 5' similar to Arabidopsis
thaliana sequence At5g18650 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 571
Score = 110 bits (235), Expect(2) = 2e-044
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 647
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YF CK FDDD+SKQQY C
Sbjct: 343 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFXXTCKFFDDDISKQQYXC 522
Score = 89.0 bits (188), Expect(2) = 2e-044
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DCRHCHNE + +K
Sbjct: 211 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCRHCHNEAMSHLK 342
>gb|DR092029.1|DR092029 RTAL1_25_E06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_25_E06_A029 5', mRNA sequence
Length = 408
Score = 176 bits (378), Expect = 2e-043
Identities = 62/86 (72%), Positives = 68/86 (79%)
Frame = +3 / +2
Query: 534 TEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENFFHCSKCGC 713
TEQ+V QVCINCGVCMGKYFC CKLFDDD+SKQQYHC+ +NFFHC KCGC
Sbjct: 80 TEQDVHQVCINCGVCMGKYFCETCKLFDDDISKQQYHCDGCGICRTGGRDNFFHCFKCGC 259
Query: 714 CYSIALKNSHACVEGAMHHDCPICFE 791
CYSI LK+ H CVEGAMHH CP+CFE
Sbjct: 260 CYSIMLKDCHPCVEGAMHHICPVCFE 337
Score = 115 bits (245), Expect = 5e-025
Identities = 53/86 (61%), Positives = 55/86 (63%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SKQ GQ CIAPST * F+ IE*Q PH +QWKK S Q YCC E SSS
Sbjct: 336 SKQTGQMWCIAPSTQG*QSFNIIE*QQPHLKQWKKLSLPPVLHIPHPSQWYCCFEISSSN 157
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSV 533
SL QKYFPMQTPQLIHT TSCSV
Sbjct: 156 SLQVSQKYFPMQTPQLIHT**TSCSV 79
>gb|BE496399.1|BE496399 NXCI_017_D12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_D12 5' similar to Arabidopsis
thaliana sequence At5g22920 PGPD14 protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 575
Score = 172 bits (371), Expect = 2e-042
Identities = 59/95 (62%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 507 QQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXEN 686
++V+CSLC TEQ+V+Q C+ CGVCMGKYFC C FDD+ SKQQYHC+ +N
Sbjct: 1 RKVICSLCRTEQDVQQNCVTCGVCMGKYFCEKCNFFDDEDSKQQYHCDGCGICRTGGKDN 180
Query: 687 FFHCSKCGCCYSIALKNSHACVEGAMHHDCPICFE 791
FFHC KCGCCY+I LK+ H CVE AMHH+CP+CFE
Sbjct: 181 FFHCYKCGCCYAIQLKDCHPCVEKAMHHNCPVCFE 285
Score = 104 bits (221), Expect = 1e-021
Identities = 49/93 (52%), Positives = 54/93 (58%)
Frame = -3 / -1
Query: 790 SKQIGQS*CIAPSTHA*LFFSAIE*QHPHFEQWKKFSXXXXXXXXXXLQ*YCCLETSSSK 611
SK GQ CIA ST F+ I *QHPH QWKK S Q YCC E+SSSK
Sbjct: 284 SKHTGQLWCIAFSTQGWQSFNWIA*QHPHL*QWKKLSLPPVLQIPHPSQWYCCFESSSSK 105
Query: 610 SLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTT 512
LH QKYFP+QTPQ+ C TSCSV +E T
Sbjct: 104 KLHFSQKYFPIQTPQVTQFC*TSCSVLQSEQIT 6
>gb|BF778482.1|BF778482 NXSI_085_C06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_085_C06 5' similar to Arabidopsis thaliana
sequence At5g18650 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 448
Score = 103 bits (219), Expect(2) = 2e-041
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +3 / +1
Query: 468 DKMKRHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQY 641
D + RHELPR++V++V+CSLC TEQ V+QVC NCGV MG+YFC CK DDD+S QY
Sbjct: 265 DPLLRHELPRYKVERVICSLCDTEQNVKQVCENCGVKMGEYFCSTCKXXDDDISXXQY 438
Score = 86.3 bits (182), Expect(2) = 2e-041
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3 / +1
Query: 333 EKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 464
++ G M +GC HYRRRCRIRAPCCNEI+DC HCHNE + +K
Sbjct: 133 DRLNTGNMDHGCAHYRRRCRIRAPCCNEIYDCXHCHNEAMSHLK 264
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 506,269,918
Number of Sequences: 355925
Number of extensions: 8568886
Number of successful extensions: 67684
Number of sequences better than 1.0e-020: 93
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 11376623095
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)