TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550132.2.1
(603 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pin... 166 4e-050
gb|CF392983.1|CF392983 RTDR3_18_E06.b1_A022 Loblolly pine r... 166 4e-050
gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C fo... 166 5e-050
gb|DR014188.1|DR014188 HEAT1_24_A02.b1_A029 Root at 37 C fo... 166 5e-050
gb|CF474820.1|CF474820 RTWW2_8_G11.b1_A021 Well-watered lob... 165 7e-050
gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus add... 165 1e-048
gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus ni... 165 1e-048
gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism... 165 1e-048
gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus m... 165 1e-048
gb|CX714531.1|CX714531 RTPQ1_23_F07.b1_A032 Roots treated w... 165 1e-048
gb|CF478586.1|CF478586 RTWW3_16_C08.b1_A022 Well-watered lo... 165 1e-048
gb|DR056886.1|DR056886 RTNIT1_1_E04.b1_A029 Roots minus nit... 165 2e-048
gb|DR059511.1|DR059511 RTNIT1_18_D05.b1_A029 Roots minus ni... 165 2e-048
gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine ro... 164 2e-048
gb|DR091587.1|DR091587 RTAL1_22_D06.g1_A029 Roots plus adde... 158 6e-048
gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus add... 162 8e-048
gb|DR011698.1|DR011698 HEAT1_7_G09.b1_A029 Root at 37 C for... 162 8e-048
gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism... 158 8e-048
gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus add... 162 8e-048
gb|CF673131.1|CF673131 RTCNT1_76_G10.b1_A029 Root control P... 162 8e-048
gb|DR177385.1|DR177385 RTMNUT1_5_B10.b1_A029 Roots minus mi... 157 8e-048
gb|DR070348.1|DR070348 RTDK1_12_F05.g1_A029 Roots, dark Pin... 162 8e-048
gb|DR078006.1|DR078006 RTFEPL1_1_G10.b1_A029 Roots plus add... 113 6e-046
gb|CF395276.1|CF395276 RTDS2_10_G06.g1_A021 Drought-stresse... 131 5e-045
gb|CF664050.1|CF664050 RTCNT1_7_A11.b1_A029 Root control Pi... 104 1e-043
gb|DR681812.1|DR681812 EST1071887 Normalized pine embryo li... 162 1e-042
gb|DR079081.1|DR079081 RTFEPL1_9_A09.b1_A029 Roots plus add... 144 2e-039
gb|DR079158.1|DR079158 RTFEPL1_9_A09.g1_A029 Roots plus add... 144 2e-039
gb|CO167937.1|CO167937 FLD1_72_F02.b1_A029 Root flooded Pin... 144 2e-039
gb|DR681989.1|DR681989 EST1072064 Normalized pine embryo li... 144 2e-039
gb|DT626393.1|DT626393 EST1158317 Sequencing ESTs from lobl... 144 2e-039
gb|CO363622.1|CO363622 RTK1_10_G06.g1_A029 Roots minus pota... 144 2e-039
gb|CV137491.1|CV137491 EST848700 Sequencing ESTs from loblo... 144 2e-039
gb|DR017022.1|DR017022 STRS1_13_C10.g1_A034 Shoot tip pitch... 144 2e-039
gb|DR059893.1|DR059893 RTNIT1_20_A03.g1_A029 Roots minus ni... 144 2e-039
gb|CO168019.1|CO168019 FLD1_72_F02.g1_A029 Root flooded Pin... 144 2e-039
gb|DR019838.1|DR019838 STRS1_32_F06.g1_A034 Shoot tip pitch... 143 2e-039
gb|DR011778.1|DR011778 HEAT1_7_G09.g1_A029 Root at 37 C for... 133 5e-039
gb|CF390813.1|CF390813 RTDR3_2_E01.b1_A022 Loblolly pine ro... 140 1e-038
gb|CV032282.1|CV032282 RTNACL1_7_C11.b1_A029 Roots plus add... 144 2e-038
gb|DR681990.1|DR681990 EST1072065 Normalized pine embryo li... 138 8e-038
gb|CO367200.1|CO367200 RTK1_32_G05.g1_A029 Roots minus pota... 125 1e-036
gb|CO200457.1|CO200457 GEO2_7_C07.g1_A032 Root gravitropism... 119 3e-036
gb|DR177769.1|DR177769 RTMNUT1_7_F08.b1_A029 Roots minus mi... 149 2e-035
gb|BX249261.1|BX249261 BX249261 Pinus pinaster differenciat... 147 8e-035
gb|BQ634345.1|BQ634345 NXRV067_G08_F NXRV (Nsf Xylem Root w... 147 8e-035
gb|CF668401.1|CF668401 RTCNT1_36_F09.b1_A029 Root control P... 147 8e-035
gb|CF668484.1|CF668484 RTCNT1_36_F09.g1_A029 Root control P... 147 8e-035
gb|CF669555.1|CF669555 RTCNT1_44_H12.b1_A029 Root control P... 147 8e-035
gb|CO170424.1|CO170424 NDL1_14_C04.b1_A029 Needles control ... 147 8e-035
gb|CO175447.1|CO175447 NDL1_54_G01.g1_A029 Needles control ... 147 8e-035
gb|CO175456.1|CO175456 NDL1_54_H01.g1_A029 Needles control ... 147 8e-035
gb|CO361906.1|CO361906 NDL2_7_H02.g1_A029 Needles control 2... 147 8e-035
gb|CO362282.1|CO362282 RTK1_2_C07.g1_A029 Roots minus potas... 147 8e-035
gb|CO369401.1|CO369401 RTK1_46_H06.g1_A029 Roots minus pota... 147 8e-035
gb|CX650671.1|CX650671 COLD1_47_G02.b1_A029 Root cold Pinus... 147 8e-035
gb|CX713282.1|CX713282 RTPQ1_8_D04.b1_A032 Roots treated wi... 147 8e-035
gb|CX713358.1|CX713358 RTPQ1_8_D04.g1_A032 Roots treated wi... 147 8e-035
gb|DR024478.1|DR024478 STRS1_65_F02.b1_A034 Shoot tip pitch... 147 8e-035
gb|DR058242.1|DR058242 RTNIT1_10_D09.g1_A029 Roots minus ni... 147 8e-035
gb|DR060297.1|DR060297 RTNIT1_27_A11.b1_A029 Roots minus ni... 147 8e-035
gb|DR060677.1|DR060677 RTNIT1_29_G05.b1_A029 Roots minus ni... 147 8e-035
gb|DR068988.1|DR068988 RTDK1_4_D03.b1_A029 Roots, dark Pinu... 147 8e-035
gb|DR118085.1|DR118085 RTMG1_11_B11.b1_A029 Roots minus mag... 147 8e-035
gb|DR118162.1|DR118162 RTMG1_11_B11.g1_A029 Roots minus mag... 147 8e-035
gb|DR177850.1|DR177850 RTMNUT1_7_F08.g1_A029 Roots minus mi... 147 8e-035
gb|DR179755.1|DR179755 RTMNUT1_24_E06.b2_A029 Roots minus m... 147 8e-035
gb|DR180243.1|DR180243 RTMNUT1_27_H03.b1_A029 Roots minus m... 147 8e-035
gb|DR180323.1|DR180323 RTMNUT1_27_H03.g1_A029 Roots minus m... 147 8e-035
gb|CX712825.1|CX712825 RTPQ1_5_B12.b1_A032 Roots treated wi... 146 1e-034
gb|DR117322.1|DR117322 RTMG1_6_F10.b1_A029 Roots minus magn... 146 1e-034
gb|CO197063.1|CO197063 GEO1_3_D05.g1_A029 Root gravitropism... 144 4e-034
gb|BF610538.1|BF610538 NXSI_059_G05_F NXSI (Nsf Xylem Side ... 144 5e-034
gb|DR079574.1|DR079574 RTFEPL1_12_E02.b1_A029 Roots plus ad... 144 7e-034
gb|DR743971.1|DR743971 RTCU1_19_H05.b1_A029 Roots plus adde... 144 7e-034
gb|DR019762.1|DR019762 STRS1_32_F06.b1_A034 Shoot tip pitch... 143 1e-033
gb|CF392132.1|CF392132 RTDR3_8_D07.b1_A022 Loblolly pine ro... 142 2e-033
gb|BX254251.1|BX254251 BX254251 Pinus pinaster differenciat... 136 2e-031
gb|DR056369.1|DR056369 RTCA1_29_G06.g1_A029 Roots minus cal... 131 3e-031
gb|DR056832.1|DR056832 RTCA1_32_G06.g1_A029 Roots minus cal... 131 3e-031
gb|DR055965.1|DR055965 RTCA1_27_E03.b1_A029 Roots minus cal... 113 4e-031
gb|CF472876.1|CF472876 RTDS1_12_H12.b1_A015 Drought-stresse... 134 4e-031
gb|CO370462.1|CO370462 RTK1_68_B12.b1_A029 Roots minus pota... 95 7e-031
gb|DR078088.1|DR078088 RTFEPL1_1_G10.g1_A029 Roots plus add... 105 1e-030
gb|CF665023.1|CF665023 RTCNT1_13_H10.b1_A029 Root control P... 133 1e-030
gb|CO163346.1|CO163346 FLD1_41_B05.b1_A029 Root flooded Pin... 100 2e-030
gb|BX680375.1|BX680375 BX680375 RS Pinus pinaster cDNA clon... 99 5e-030
gb|DR744045.1|DR744045 RTCU1_19_H05.g1_A029 Roots plus adde... 111 6e-030
gb|DR059811.1|DR059811 RTNIT1_20_A03.b1_A029 Roots minus ni... 111 6e-030
gb|CX648261.1|CX648261 COLD1_27_B11.g1_A029 Root cold Pinus... 103 2e-029
gb|DR055988.1|DR055988 RTCA1_27_G07.b1_A029 Roots minus cal... 102 3e-029
gb|DR117730.1|DR117730 RTMG1_8_G01.g1_A029 Roots minus magn... 102 3e-029
gb|DR013139.1|DR013139 HEAT1_17_F05.b1_A029 Root at 37 C fo... 102 3e-029
gb|DR386118.1|DR386118 RTHG1_13_C02.b1_A029 Roots plus adde... 102 3e-029
gb|CO159438.1|CO159438 FLD1_13_C12.g1_A029 Root flooded Pin... 102 3e-029
gb|DR179164.1|DR179164 RTMNUT1_16_H11.b1_A029 Roots minus m... 102 3e-029
gb|DR179243.1|DR179243 RTMNUT1_16_H11.g1_A029 Roots minus m... 102 3e-029
gb|DR024062.1|DR024062 STRS1_62_B05.b1_A034 Shoot tip pitch... 102 3e-029
gb|DR177472.1|DR177472 RTMNUT1_5_B10.g1_A029 Roots minus mi... 95 3e-029
gb|CO159111.1|CO159111 FLD1_11_A05.g1_A029 Root flooded Pin... 102 3e-029
gb|DR387808.1|DR387808 RTHG1_24_F11.b1_A029 Roots plus adde... 102 3e-029
gb|BX682280.2|BX682280 BX682280 Pinus pinaster differenciat... 127 9e-029
gb|CF477810.1|CF477810 RTWW3_13_G03.b1_A022 Well-watered lo... 124 4e-028
gb|DR054443.1|DR054443 RTCA1_17_H12.b1_A029 Roots minus cal... 124 4e-028
gb|CF393010.1|CF393010 RTDR3_18_E06.g1_A022 Loblolly pine r... 92 5e-028
gb|CO161127.1|CO161127 FLD1_26_G06.g1_A029 Root flooded Pin... 84 1e-027
gb|CO161047.1|CO161047 FLD1_26_G06.b1_A029 Root flooded Pin... 84 1e-027
gb|CF393543.1|CF393543 RTDR3_13_F08.g1_A022 Loblolly pine r... 102 2e-027
gb|CF671734.1|CF671734 RTCNT1_59_A09.b1_A029 Root control P... 122 2e-027
gb|DN628031.1|DN628031 EST978847 Subtracted pine embryo lib... 96 3e-027
gb|DN628852.1|DN628852 EST979668 Subtracted pine embryo lib... 96 3e-027
gb|DN632729.1|DN632729 EST983545 Subtracted pine embryo lib... 96 3e-027
gb|DN634085.1|DN634085 EST984901 Subtracted pine embryo lib... 96 3e-027
gb|DN630889.1|DN630889 EST981705 Subtracted pine embryo lib... 96 3e-027
gb|BQ654796.1|BQ654796 NXRV085_G08_F NXRV (Nsf Xylem Root w... 94 5e-027
gb|DN631306.1|DN631306 EST982122 Subtracted pine embryo lib... 95 5e-027
gb|BX678571.1|BX678571 BX678571 RS Pinus pinaster cDNA clon... 97 5e-026
gb|CF479741.1|CF479741 RTWW3_12_B06.b1_A022 Well-watered lo... 116 2e-025
gb|DR178749.1|DR178749 RTMNUT1_13_F03.g1_A029 Roots minus m... 90 2e-025
gb|CF664508.1|CF664508 RTCNT1_10_F05.b1_A029 Root control P... 89 3e-025
gb|CF474032.1|CF474032 RTWW2_18_C08.b1_A021 Well-watered lo... 89 4e-025
gb|BE241360.1|BE241360 NXNV_186_H11_F Nsf Xylem Normal wood... 112 2e-024
gb|DR169352.1|DR169352 RTPHOS1_31_F11.g1_A029 Roots minus p... 112 2e-024
gb|DR092906.1|DR092906 STRR1_4_G04.g1_A033 Stem Response Re... 86 2e-024
gb|DR054728.1|DR054728 RTCA1_19_E01.b1_A029 Roots minus cal... 90 4e-023
gb|BX682419.1|BX682419 BX682419 Pinus pinaster differenciat... 78 5e-022
gb|DR181728.1|DR181728 RTMNUT1_40_D09.g2_A029 Roots minus m... 78 7e-022
gb|CF393447.1|CF393447 RTDR3_13_F08.b1_A022 Loblolly pine r... 78 7e-022
gb|AL750794.1|AL750794 AL750794 RN Pinus pinaster cDNA clon... 102 2e-021
gb|DN450818.1|DN450818 EST946617 Sequencing ESTs from loblo... 75 3e-021
gb|DT625150.1|DT625150 EST1159425 Sequencing ESTs from lobl... 75 3e-021
gb|DR050863.1|DR050863 RTBOR1_26_D09.b1_A029 Roots plus add... 100 7e-021
>gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_B05_A029 5', mRNA sequence
Length = 794
Score = 166 bits (356), Expect(2) = 4e-050
Identities = 67/126 (53%), Positives = 86/126 (68%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+V++D+
Sbjct: 484 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDI 305
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY+A D PFGG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 304 DTVNRLSRSIRAGVIWVNCYYAFFPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 125
Query: 111 ASPWI* 94
SPW+*
Sbjct: 124 DSPWL* 107
Score = 115 bits (246), Expect(2) = 4e-028
Identities = 64/124 (51%), Positives = 70/124 (56%)
Frame = +2 / +3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 114 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESL 293
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S S T PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 294 LTVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 473
Query: 461 **PF 472
* PF
Sbjct: 474 *NPF 485
Score = 52.4 bits (108), Expect(2) = 4e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 574 KTQFEKILEYIEHGKREGAKLLTGGNRVGEKG 479
Score = 29.0 bits (57), Expect(2) = 4e-028
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 480 PFSPTRLPPVNSFAPSRFPCSM 545
>gb|CF392983.1|CF392983 RTDR3_18_E06.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_18_E06_A022 3', mRNA
sequence
Length = 607
Score = 166 bits (356), Expect(2) = 4e-050
Identities = 67/126 (53%), Positives = 86/126 (68%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+V++D+
Sbjct: 155 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDI 334
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY+A D PFGG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 335 DTVNRLSRSIRAGVIWVNCYYAFFPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 514
Query: 111 ASPWI* 94
SPW+*
Sbjct: 515 DSPWL* 532
Score = 115 bits (246), Expect(2) = 4e-028
Identities = 64/124 (51%), Positives = 70/124 (56%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 525 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESL 346
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S S T PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 345 LTVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 166
Query: 461 **PF 472
* PF
Sbjct: 165 *NPF 154
Score = 52.4 bits (108), Expect(2) = 4e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 65 KTQFEKILEYIEHGKREGAKLLTGGNRVGEKG 160
Score = 29.0 bits (57), Expect(2) = 4e-028
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 159 PFSPTRLPPVNSFAPSRFPCSM 94
>gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_24_A02_A029 5', mRNA sequence
Length = 925
Score = 166 bits (356), Expect(2) = 5e-050
Identities = 67/126 (53%), Positives = 86/126 (68%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+V++D+
Sbjct: 437 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDI 616
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY+A D PFGG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 617 DTVNRLSRSIRAGVIWVNCYYAFFPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 796
Query: 111 ASPWI* 94
SPW+*
Sbjct: 797 DSPWL* 814
Score = 116 bits (247), Expect(2) = 3e-028
Identities = 64/124 (51%), Positives = 70/124 (56%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 807 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESL 628
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S S T PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 627 LTVSISLDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 448
Query: 461 **PF 472
* PF
Sbjct: 447 *NPF 436
Score = 51.9 bits (107), Expect(2) = 5e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 347 KTQFEKILEYIEHGKREGAKLLTGGSRVGEKG 442
Score = 29.0 bits (57), Expect(2) = 3e-028
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 441 PFSPTRLPPVNSFAPSRFPCSM 376
>gb|DR014188.1|DR014188 HEAT1_24_A02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_24_A02_A029 3', mRNA sequence
Length = 753
Score = 166 bits (356), Expect(2) = 5e-050
Identities = 67/126 (53%), Positives = 86/126 (68%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+V++D+
Sbjct: 256 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDI 435
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY+A D PFGG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 436 DTVNRLSRSIRAGVIWVNCYYAFFPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 615
Query: 111 ASPWI* 94
SPW+*
Sbjct: 616 DSPWL* 633
Score = 116 bits (247), Expect(2) = 3e-028
Identities = 64/124 (51%), Positives = 70/124 (56%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 626 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESL 447
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S S T PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 446 LTVSISLDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 267
Query: 461 **PF 472
* PF
Sbjct: 266 *NPF 255
Score = 51.9 bits (107), Expect(2) = 5e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 166 KTQFEKILEYIEHGKREGAKLLTGGSRVGEKG 261
Score = 29.0 bits (57), Expect(2) = 3e-028
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 260 PFSPTRLPPVNSFAPSRFPCSM 195
>gb|CF474820.1|CF474820 RTWW2_8_G11.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_8_G11_A021 3', mRNA sequence
Length = 564
Score = 165 bits (354), Expect(2) = 7e-050
Identities = 67/126 (53%), Positives = 85/126 (67%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+V++D+
Sbjct: 112 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDI 291
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY+A D PFGG KMSG G++ G+ L YLAVK V+TPL
Sbjct: 292 DTVNRLSRSIRAGVIWVNCYYAFFPDAPFGGYKMSGIGREHGLDVLKNYLAVKCVITPLH 471
Query: 111 ASPWI* 94
SPW+*
Sbjct: 472 DSPWL* 489
Score = 115 bits (246), Expect(2) = 4e-028
Identities = 64/124 (51%), Positives = 70/124 (56%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 482 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGKNA**QLTQITPARIDLESL 303
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S S T PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 302 LTVSISFDTIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 123
Query: 461 **PF 472
* PF
Sbjct: 122 *NPF 111
Score = 52.4 bits (108), Expect(2) = 7e-050
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 22 KTQFEKILEYIEHGKREGAKLLTGGNRVGEKG 117
Score = 29.0 bits (57), Expect(2) = 4e-028
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 116 PFSPTRLPPVNSFAPSRFPCSM 51
>gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_G12_A029 3', mRNA sequence
Length = 826
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 343 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 522
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 523 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 702
Query: 111 ASPWI* 94
SPW+*
Sbjct: 703 DSPWL* 720
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -3
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 731 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 552
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 551 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 372
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 371 NIVGSM*NP 345
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 253 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 348
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 347 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 261
>gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_H06_A029 3', mRNA sequence
Length = 782
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 307 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 486
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 487 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 666
Query: 111 ASPWI* 94
SPW+*
Sbjct: 667 DSPWL* 684
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -1
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 695 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 516
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 515 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 336
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 335 NIVGSM*NP 309
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 217 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 312
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 311 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 225
>gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_F12_A029 5', mRNA sequence
Length = 773
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 416 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 237
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 236 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 57
Query: 111 ASPWI* 94
SPW+*
Sbjct: 56 DSPWL* 39
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +1
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 28 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 207
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 208 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 387
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 388 NIVGSM*NP 414
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 506 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 411
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 412 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 498
>gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_D08_A029 3', mRNA sequence
Length = 716
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 294 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 473
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 474 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 653
Query: 111 ASPWI* 94
SPW+*
Sbjct: 654 DSPWL* 671
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 682 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 503
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 502 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 323
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 322 NIVGSM*NP 296
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 204 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 299
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 298 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 212
>gb|CX714531.1|CX714531 RTPQ1_23_F07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_23_F07_A032 3', mRNA sequence
Length = 654
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 180 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 359
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 360 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 539
Query: 111 ASPWI* 94
SPW+*
Sbjct: 540 DSPWL* 557
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -3
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 568 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 389
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 388 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 209
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 208 NIVGSM*NP 182
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 90 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 185
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 184 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 98
>gb|CF478586.1|CF478586 RTWW3_16_C08.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_C08_A022 3', mRNA sequence
Length = 643
Score = 165 bits (355), Expect(2) = 1e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 203 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 382
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 383 NIANRLSRSLRAGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 562
Query: 111 ASPWI* 94
SPW+*
Sbjct: 563 DSPWL* 580
Score = 120 bits (257), Expect(2) = 6e-029
Identities = 67/129 (51%), Positives = 75/129 (58%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT PAR
Sbjct: 591 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPAR 412
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 411 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 232
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 231 NIVGSM*NP 205
Score = 47.8 bits (98), Expect(2) = 1e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 113 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 208
Score = 26.7 bits (52), Expect(2) = 6e-029
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 207 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 121
>gb|DR056886.1|DR056886 RTNIT1_1_E04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_E04_A029 3', mRNA sequence
Length = 777
Score = 165 bits (354), Expect(2) = 2e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 298 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 477
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 478 NIANRLSRSLRVGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 657
Query: 111 ASPWI* 94
SPW+*
Sbjct: 658 DSPWL* 675
Score = 118 bits (253), Expect(2) = 2e-028
Identities = 66/129 (51%), Positives = 74/129 (57%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT P R
Sbjct: 686 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPTR 507
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 506 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 327
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 326 NIVGSM*NP 300
Score = 47.8 bits (98), Expect(2) = 2e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 208 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 303
Score = 26.7 bits (52), Expect(2) = 2e-028
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 302 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 216
>gb|DR059511.1|DR059511 RTNIT1_18_D05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_D05_A029 3', mRNA sequence
Length = 732
Score = 165 bits (354), Expect(2) = 2e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 256 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 435
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 436 NIANRLSRSLRVGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 615
Query: 111 ASPWI* 94
SPW+*
Sbjct: 616 DSPWL* 633
Score = 118 bits (253), Expect(2) = 2e-028
Identities = 66/129 (51%), Positives = 74/129 (57%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT P R
Sbjct: 644 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPTR 465
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 464 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 285
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 284 NIVGSM*NP 258
Score = 47.8 bits (98), Expect(2) = 2e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 166 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 261
Score = 26.7 bits (52), Expect(2) = 2e-028
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 260 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 174
>gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_9_A07_A021 5', mRNA
sequence
Length = 767
Score = 164 bits (353), Expect(2) = 2e-048
Identities = 66/126 (52%), Positives = 88/126 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 476 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 297
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 296 NIANRLSRSLRVGTVWINSYLAVGLDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 117
Query: 111 ASPWI* 94
SPW+*
Sbjct: 116 DSPWL* 99
Score = 119 bits (255), Expect(2) = 1e-028
Identities = 66/129 (51%), Positives = 74/129 (57%)
Frame = +2 / +1
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT P R
Sbjct: 88 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSRPTAR*LLIHTVPTR 267
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 268 RDLESLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 447
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 448 NIVGSM*NP 474
Score = 47.8 bits (98), Expect(2) = 2e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 566 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 471
Score = 26.7 bits (52), Expect(2) = 1e-028
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 472 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 558
>gb|DR091587.1|DR091587 RTAL1_22_D06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_D06_A029 5', mRNA sequence
Length = 725
Score = 158 bits (339), Expect(2) = 6e-048
Identities = 66/133 (49%), Positives = 88/133 (66%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
+G+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG++T+++
Sbjct: 549 QGFYIEPTIFSHVQEDMKIGKEEIFGPVMSVFKFRSIEEAIELGNKTIYGLAAGIMTKNI 370
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY A+ D P GG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 369 DIVNRLSRSIRAGVIWVNCYAALDPDTPIGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 190
Query: 111 ASPWI*FSLISGV 73
SPW+* +S V
Sbjct: 189 DSPWL*NYALSFV 151
Score = 109 bits (232), Expect(2) = 2e-026
Identities = 62/123 (50%), Positives = 68/123 (55%)
Frame = +2 / +2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 179 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPIGVSGSNAA*QLTQITPARIDLESL 358
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S V PA PY V F ++ASS LN MTGP ISS + MSS T K VGSM
Sbjct: 359 LTISIFFVIIPAAKPYIVLFPSSMASSILLNLKTDMTGPNISSLPIFMSSCTWEKMVGSM 538
Query: 461 **P 469
* P
Sbjct: 539 *NP 547
Score = 52.8 bits (109), Expect(2) = 6e-048
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 639 KTQFEKILEYIEHGKREGAKLLTGGNRVGEQG 544
Score = 29.5 bits (58), Expect(2) = 2e-026
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / +2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 545 PCSPTRLPPVNSFAPSRFPCSM 610
>gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H04_A029 3', mRNA sequence
Length = 867
Score = 162 bits (349), Expect(2) = 8e-048
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 399 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 578
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 579 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 758
Query: 111 ASPWI* 94
SPW+*
Sbjct: 759 DSPWL* 776
Score = 114 bits (244), Expect(2) = 3e-027
Identities = 66/129 (51%), Positives = 73/129 (56%)
Frame = +2 / -3
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S A+* HT PAR
Sbjct: 787 IKYFYSQGES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPAR 608
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 607 RDLEILFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 428
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 427 NIVGSM*NP 401
Score = 47.8 bits (98), Expect(2) = 8e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 309 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 404
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 403 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 317
>gb|DR011698.1|DR011698 HEAT1_7_G09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_G09_A029 3', mRNA sequence
Length = 834
Score = 162 bits (349), Expect(2) = 8e-048
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 298 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 477
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 478 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 657
Query: 111 ASPWI* 94
SPW+*
Sbjct: 658 DSPWL* 675
Score = 114 bits (244), Expect(2) = 3e-027
Identities = 66/129 (51%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S A+* HT PAR
Sbjct: 686 IKYFYSQGES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPAR 507
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 506 RDLEILFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 327
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 326 NIVGSM*NP 300
Score = 47.8 bits (98), Expect(2) = 8e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 208 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 303
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 302 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 216
>gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C07_A032 3', mRNA sequence
Length = 767
Score = 158 bits (340), Expect(2) = 8e-048
Identities = 64/126 (50%), Positives = 84/126 (66%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+ ++++
Sbjct: 321 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIASKNI 500
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY + D PFGG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 501 DTVNRISRSIRAGVIWVNCYHVVFPDAPFGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 680
Query: 111 ASPWI* 94
SPW+*
Sbjct: 681 DSPWL* 698
Score = 108 bits (231), Expect(2) = 4e-026
Identities = 61/124 (49%), Positives = 66/124 (53%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S *Q T TPAR DL
Sbjct: 691 QGESWRGVMTHLTAK*FLRTSRPCSLPIPLILYPPNGASGNTTW*QLTQITPARIDLEIL 512
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S PA PY V ++ASS LN MTGP ISSF + MSS T K VGSM
Sbjct: 511 LTVSIFLDAIPAAKPYIVLLPSSMASSMVLNLKMDMTGPNISSFPIFMSSCTWEKMVGSM 332
Query: 461 **PF 472
* PF
Sbjct: 331 *NPF 320
Score = 51.9 bits (107), Expect(2) = 8e-048
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 231 KTQFEKILEYIEHGKREGAKLLTGGSRVGEKG 326
Score = 29.0 bits (57), Expect(2) = 4e-026
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 325 PFSPTRLPPVNSFAPSRFPCSM 260
>gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_H04_A029 3', mRNA sequence
Length = 744
Score = 162 bits (349), Expect(2) = 8e-048
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 307 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 486
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 487 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 666
Query: 111 ASPWI* 94
SPW+*
Sbjct: 667 DSPWL* 684
Score = 114 bits (244), Expect(2) = 3e-027
Identities = 66/129 (51%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S A+* HT PAR
Sbjct: 695 IKYFYSQGES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPAR 516
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 515 RDLEILFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 336
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 335 NIVGSM*NP 309
Score = 47.8 bits (98), Expect(2) = 8e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 217 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 312
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 311 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 225
>gb|CF673131.1|CF673131 RTCNT1_76_G10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_76_G10_A029 3', mRNA sequence
Length = 695
Score = 162 bits (349), Expect(2) = 8e-048
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 255 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 434
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 435 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 614
Query: 111 ASPWI* 94
SPW+*
Sbjct: 615 DSPWL* 632
Score = 114 bits (244), Expect(2) = 3e-027
Identities = 66/129 (51%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S A+* HT PAR
Sbjct: 643 IKYFYSQGES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPAR 464
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 463 RDLEILFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 284
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 283 NIVGSM*NP 257
Score = 47.8 bits (98), Expect(2) = 8e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 165 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 260
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 259 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 173
>gb|DR177385.1|DR177385 RTMNUT1_5_B10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_B10_A029 3', mRNA sequence
Length = 646
Score = 157 bits (338), Expect(2) = 8e-048
Identities = 64/126 (50%), Positives = 85/126 (67%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
+G+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG++T+++
Sbjct: 182 QGFYIEPTIFSHVQEDMKIGKEEIFGPVMSVFKFRSIEEAIELGNKTIYGLAAGIMTKNI 361
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCY A+ D P GG KMSG G+++G+ L YLAVK V+TPL
Sbjct: 362 DIVNRLSRSIRAGVIWVNCYAALDPDTPIGGYKMSGIGREQGLDVLKNYLAVKCVITPLH 541
Query: 111 ASPWI* 94
SPW+*
Sbjct: 542 DSPWL* 559
Score = 108 bits (231), Expect(2) = 3e-026
Identities = 62/123 (50%), Positives = 68/123 (55%)
Frame = +2 / -2
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ GV T LTA+ P SLP PLIL PP G S A *Q T TPAR DL +
Sbjct: 552 QGES*RGVMTHLTAK*FLRTSRPCSLPIPLILYPPIGVSGSNAA*QLTQITPARIDLESL 373
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
S V PA PY V F ++ASS LN MTGP ISS + MSS T K VGSM
Sbjct: 372 LTISIFFVIIPAAKPYIVLFPSSMASSILLNLKTDMTGPNISSLPIFMSSCTWEKMVGSM 193
Query: 461 **P 469
* P
Sbjct: 192 *NP 184
Score = 52.8 bits (109), Expect(2) = 8e-048
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 92 KTQFEKILEYIEHGKREGAKLLTGGNRVGEQG 187
Score = 29.5 bits (58), Expect(2) = 3e-026
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P P LPPV APSR P M
Sbjct: 186 PCSPTRLPPVNSFAPSRFPCSM 121
>gb|DR070348.1|DR070348 RTDK1_12_F05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_F05_A029 5', mRNA sequence
Length = 592
Score = 162 bits (349), Expect(2) = 8e-048
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 471 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 292
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG G++ G + L+ YL VK V+TPL+
Sbjct: 291 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQ 112
Query: 111 ASPWI* 94
SPW+*
Sbjct: 111 DSPWL* 94
Score = 117 bits (250), Expect(2) = 5e-028
Identities = 67/130 (51%), Positives = 74/130 (56%)
Frame = +2 / +2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S A+* HT PAR
Sbjct: 83 IKYFYSQGES*RGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGLTAR*LLIHTVPAR 262
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 263 RDLEILFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 442
Query: 443 KTVGSM**PF 472
VGSM* PF
Sbjct: 443 NIVGSM*NPF 472
Score = 47.8 bits (98), Expect(2) = 8e-048
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 561 KMQYEKVLEYIQYGKRDGANLLFGGNSLGEKG 466
Score = 26.7 bits (52), Expect(2) = 5e-028
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 467 PFSPKEFPPNNKLAPSLFPY*IYSNTFSY 553
>gb|DR078006.1|DR078006 RTFEPL1_1_G10.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_G10_A029 3', mRNA sequence
Length = 694
Score = 113 bits (241), Expect(2) = 9e-027
Identities = 64/129 (49%), Positives = 73/129 (56%)
Frame = +2 / -2
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
IK QGE+ GV T LT + S P SLP PLIL PP G S P A+* HT P
Sbjct: 642 IKYFYSQGESWRGVMTHLTCK*FSRP*EPYSLPIPLILYPPSGTSGPTAR*LLIHTVPTP 463
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
+L + FA S V PAP P V F L+I SS LNF +TGP ISSFA+ +SS T
Sbjct: 462 KNLKSLFAIFISLVMIPAPKP*IVLFPLSITSSMVLNFRMDITGPNISSFAICISSSTSE 283
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 282 NIVGSM*NP 256
Score = 105 bits (224), Expect(3) = 6e-046
Identities = 39/61 (63%), Positives = 53/61 (86%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 254 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 433
Query: 291 D 289
+
Sbjct: 434 N 436
Score = 69.3 bits (145), Expect(3) = 6e-046
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -1 / +2
Query: 234 YFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
Y A+G D P GG KMSG G++ G + L+ YL VK V+TPL+ SPW+*
Sbjct: 491 YLAVGPDVPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQDSPWL* 631
Score = 47.8 bits (98), Expect(3) = 6e-046
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 164 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 259
Score = 26.7 bits (52), Expect(2) = 9e-027
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 258 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 172
>gb|CF395276.1|CF395276 RTDS2_10_G06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_10_G06_A021 5', mRNA sequence
Length = 799
Score = 131 bits (280), Expect(3) = 5e-045
Identities = 53/106 (50%), Positives = 71/106 (66%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 429 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 250
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHAL 154
+ N Y A+G D P GG KMSG G++ + L
Sbjct: 249 NIANRLSRSLRVGTVWINSYLAVGPDVPLGGYKMSGIGREMALMVL 112
Score = 102 bits (218), Expect(2) = 1e-023
Identities = 54/99 (54%), Positives = 60/99 (60%)
Frame = +2 / +2
Query: 173 SLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFALAI 352
SLP PLIL PP G S P A+* HT P R DL + FA S V PAP P V F L+I
Sbjct: 131 SLPIPLILYPPSGTSGPTAR*LLIHTVPTRRDLESLFAIFISLVMIPAPKP*IVLFPLSI 310
Query: 353 ASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
SS LNF +TGP ISSFA+ +SS T VGSM* P
Sbjct: 311 TSSMVLNFRMDITGPNISSFAICISSSTSENIVGSM*NP 427
Score = 47.8 bits (98), Expect(3) = 5e-045
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 519 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 424
Score = 40.5 bits (82), Expect(3) = 5e-045
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 177 KDEGMHALDKYLAVKSVVTPLRASPWI* 94
K G + L+ YL VK V+TPL+ SPW+*
Sbjct: 136 KGNGSYGLENYLQVKCVITPLQDSPWL* 53
Score = 26.7 bits (52), Expect(2) = 1e-023
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 425 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 511
>gb|CF664050.1|CF664050 RTCNT1_7_A11.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_7_A11_A029 3', mRNA sequence
Length = 645
Score = 104 bits (221), Expect(2) = 2e-024
Identities = 60/129 (46%), Positives = 71/129 (55%)
Frame = +2 / -1
Query: 83 IKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPAR 262
I+ + IQGE SGV T LT + S P SLP PLIL PP G S +*+ T P
Sbjct: 552 IRYSYIQGEF*SGVITHLTCK*FSRP*DPYSLPIPLILYPPSGASGLTTR*ELIQTVPTL 373
Query: 263 TDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLV 442
DL F S S V TPAP P V F ++ SS LNF +T P ISSFA+ +S+ T
Sbjct: 372 RDLEILFTISISLVITPAPKP*MVLFPFSMTSSIVLNFRIDITRPNISSFAIRISTSTSE 193
Query: 443 KTVGSM**P 469
VGSM* P
Sbjct: 192 NIVGSM*NP 166
Score = 100 bits (214), Expect(3) = 1e-043
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+ DM IAKEEIFG VM ++KFK +EE I + N T YGLGAGV+T+D+
Sbjct: 164 KGFYIEPTIFSDVEVDMRIAKEEIFGRVMSILKFKTIEEVIEKGNKTIYGLGAGVITKDI 343
Query: 291 D 289
D
Sbjct: 344 D 346
Score = 70.3 bits (147), Expect(3) = 1e-043
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1 / +2
Query: 234 YFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI*FSLISGVS 70
Y + D P GG KMSG G++ G + L+ YL VK V+TPL+ SPWI* LI +S
Sbjct: 401 YLVVSPDAPLGGYKMSGIGREYGSYGLENYLQVKCVITPLQNSPWI*EYLIMSIS 565
Score = 43.7 bits (89), Expect(3) = 1e-043
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E+VL YI +GK +GA LL GG G +G
Sbjct: 74 KTQFEKVLEYILYGKEDGANLLIGGNSLGDKG 169
Score = 27.6 bits (54), Expect(2) = 2e-024
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
P P PP+ ++APS P+ + T S
Sbjct: 168 PLSPKEFPPINKLAPSSFPYRIYSNTFS 85
>gb|DR681812.1|DR681812 EST1071887 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA204, mRNA sequence
Length = 575
Score = 162 bits (348), Expect(2) = 1e-042
Identities = 65/127 (51%), Positives = 87/127 (68%)
Frame = -1 / -2
Query: 474 GKGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
G G+YIE T+F++V++DM IA++EIFGPVM ++KFK ++EAI R N T YGLGAG+VT++
Sbjct: 514 GPGFYIETTIFSDVQDDMKIAQDEIFGPVMSILKFKTIDEAIERGNKTIYGLGAGIVTKN 335
Query: 294 LDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPL 115
+D NCY DCP GG KMSG G++ G L+ YL VKSV+TPL
Sbjct: 334 IDVANRFARSLCAGMVWINCYLVGSPDCPMGGYKMSGIGREYGSTGLENYLQVKSVITPL 155
Query: 114 RASPWI* 94
+ SPW+*
Sbjct: 154 QESPWL* 134
Score = 118 bits (252), Expect(2) = 8e-029
Identities = 66/125 (52%), Positives = 75/125 (60%)
Frame = +2 / +3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QG++ SGV TDLT + S P SLP PLIL PP GQS +*Q HT PA DL
Sbjct: 141 QGDS*SGVMTDLTCK*FSRPVDPYSLPIPLILYPPIGQSGLPTR*QLIHTIPAHKDLANL 320
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS VT PAP P V F L+IASS LNF +TGPKISS A+ +SS T V S+
Sbjct: 321 LATSMFLVTIPAPKP*IVLFPLSIASSIVLNFKIDITGPKISSCAIFISS*TSENIVVSI 500
Query: 461 **PFP 475
* P P
Sbjct: 501 *NPGP 515
Score = 30.9 bits (61), Expect(2) = 1e-042
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 540 YIGHGKREGATLLTGGRPCGPEG 472
YI +GK EGA L+TGG G G
Sbjct: 574 YIQYGKDEGANLVTGGSCLGGPG 506
Score = 28.6 bits (56), Expect(2) = 8e-029
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPW 532
P P LPPV ++APS P+
Sbjct: 507 PGPPKQLPPVTKLAPSSFPY 566
>gb|DR079081.1|DR079081 RTFEPL1_9_A09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_A09_A029 3', mRNA sequence
Length = 911
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 545 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 366
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 365 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 186
Query: 111 ASPWI* 94
W+*
Sbjct: 185 NPAWL* 168
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 629 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 540
>gb|DR079158.1|DR079158 RTFEPL1_9_A09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_A09_A029 5', mRNA sequence
Length = 881
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 663 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 484
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 483 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 304
Query: 111 ASPWI* 94
W+*
Sbjct: 303 NPAWL* 286
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 747 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 658
>gb|CO167937.1|CO167937 FLD1_72_F02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_72_F02_A029 3', mRNA sequence
Length = 855
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 160 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 339
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 340 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 519
Query: 111 ASPWI* 94
W+*
Sbjct: 520 NPAWL* 537
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 76 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 165
>gb|DR681989.1|DR681989 EST1072064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA487, mRNA sequence
Length = 856
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 659 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 480
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 479 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 300
Query: 111 ASPWI* 94
W+*
Sbjct: 299 NPAWL* 282
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 743 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 654
>gb|DT626393.1|DT626393 EST1158317 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAA33 5' end, mRNA sequence
Length = 836
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 184 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 363
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 364 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 543
Query: 111 ASPWI* 94
W+*
Sbjct: 544 NPAWL* 561
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 100 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 189
>gb|CO363622.1|CO363622 RTK1_10_G06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_G06_A029 5', mRNA sequence
Length = 825
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 274 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 453
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 454 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 633
Query: 111 ASPWI* 94
W+*
Sbjct: 634 NPAWL* 651
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 190 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 279
>gb|CV137491.1|CV137491 EST848700 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAP24 5' end, mRNA sequence
Length = 786
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 184 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 363
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 364 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 543
Query: 111 ASPWI* 94
W+*
Sbjct: 544 NPAWL* 561
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 100 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 189
>gb|DR017022.1|DR017022 STRS1_13_C10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_C10_A034 5', mRNA sequence
Length = 779
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 609 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 430
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 429 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 250
Query: 111 ASPWI* 94
W+*
Sbjct: 249 NPAWL* 232
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 693 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 604
>gb|DR059893.1|DR059893 RTNIT1_20_A03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_20_A03_A029 5', mRNA sequence
Length = 775
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 688 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 509
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 508 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 329
Query: 111 ASPWI* 94
W+*
Sbjct: 328 NPAWL* 311
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 772 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 683
>gb|CO168019.1|CO168019 FLD1_72_F02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_72_F02_A029 5', mRNA sequence
Length = 773
Score = 144 bits (308), Expect(2) = 2e-039
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 159 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 338
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 339 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 518
Query: 111 ASPWI* 94
W+*
Sbjct: 519 NPAWL* 536
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 75 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 164
>gb|DR019838.1|DR019838 STRS1_32_F06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_F06_A034 5', mRNA sequence
Length = 796
Score = 143 bits (307), Expect(2) = 2e-039
Identities = 58/125 (46%), Positives = 78/125 (62%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 343 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 522
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 523 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 702
Query: 111 ASPWI 97
W+
Sbjct: 703 NPAWL 717
Score = 38.6 bits (78), Expect(2) = 2e-039
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 259 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 348
>gb|DR011778.1|DR011778 HEAT1_7_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_G09_A029 5', mRNA sequence
Length = 862
Score = 133 bits (285), Expect(2) = 5e-039
Identities = 56/120 (46%), Positives = 75/120 (62%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 446 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 625
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ N Y A+ D P GG KMSG GK G + L+ + + P R
Sbjct: 626 NIANRISRSLRAGTVWINSYLAVSPDVPLGGYKMSGIGKRYGSYGLEITYKLNVSLLPFR 805
Score = 96.8 bits (205), Expect(2) = 7e-022
Identities = 53/101 (52%), Positives = 58/101 (57%)
Frame = +2 / -2
Query: 167 PSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFAL 346
P P PLIL PP G S A+* HT PAR DL FA S V PAP P V F L
Sbjct: 750 PYLFPIPLILYPPSGTSGLTAR*LLIHTVPARRDLEILFAIFISLVMIPAPKP*IVLFPL 571
Query: 347 AIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
+I SS LNF +TGP ISSFA+ +SS T VGSM* P
Sbjct: 570 SITSSMVLNFRMDITGPNISSFAICISSSTSENIVGSM*NP 448
Score = 47.8 bits (98), Expect(2) = 5e-039
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI +GKR+GA LL GG G +G
Sbjct: 356 KMQYEKVLEYIQYGKRDGANLLFGGNSLGDKG 451
Score = 26.7 bits (52), Expect(2) = 7e-022
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY 559
P P PP ++APS P+ + T SY
Sbjct: 450 PLSPKEFPPNNKLAPSLFPY*IYSNTFSY 364
>gb|CF390813.1|CF390813 RTDR3_2_E01.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_E01_A022 3', mRNA
sequence
Length = 535
Score = 140 bits (300), Expect(3) = 1e-038
Identities = 56/110 (50%), Positives = 75/110 (68%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V++DM IAKEEIFGPVM ++KFK +EE I R N T YGLGAG++T+D+
Sbjct: 55 KGFYIEPTIFSDVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITKDI 234
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYL 142
+ N Y A+G D P GG KMSG G++ G + L+ YL
Sbjct: 235 NIANRLSRSLRVGTVWINSYLAVGPDVPLGGYKMSGIGREYGSYGLENYL 384
Score = 105 bits (223), Expect(2) = 4e-023
Identities = 55/101 (54%), Positives = 61/101 (60%)
Frame = +2 / -3
Query: 167 PSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFAL 346
P SLP PLIL PP G S P A+* HT P R DL + FA S V PAP P V F L
Sbjct: 359 PYSLPIPLILYPPSGTSGPTAR*LLIHTVPTRRDLESLFAIFISLVMIPAPKP*IVLFPL 180
Query: 347 AIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
+I SS LNF +TGP ISSFA+ +SS T VGSM* P
Sbjct: 179 SITSSMVLNFRMDITGPNISSFAICISSSTSENIVGSM*NP 57
Score = 29.5 bits (58), Expect(3) = 1e-038
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 531 HGKREGATLLTGGRPCGPEG 472
+GKR+GA LL GG G +G
Sbjct: 1 YGKRDGANLLFGGNSLGDKG 60
Score = 28.1 bits (55), Expect(3) = 1e-038
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1 / +2
Query: 138 VKSVVTPLRASPWI* 94
VK V+TPL+ SPW+*
Sbjct: 389 VKCVITPLQDSPWL* 433
Score = 22.6 bits (43), Expect(2) = 4e-023
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P PP ++APS P
Sbjct: 59 PLSPKEFPPNNKLAPSLFP 3
>gb|CV032282.1|CV032282 RTNACL1_7_C11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_C11_A029 3', mRNA sequence
Length = 787
Score = 144 bits (308), Expect(2) = 2e-038
Identities = 59/126 (46%), Positives = 79/126 (62%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 712 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 533
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL+
Sbjct: 532 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPLK 353
Query: 111 ASPWI* 94
W+*
Sbjct: 352 NRAWL* 335
Score = 35.0 bits (70), Expect(2) = 2e-038
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 552 RVLSYIGHGKREGATLLTGGRPCGPEG 472
+++SYI GK GA L+TGG G +G
Sbjct: 787 KIMSYIKAGKESGAKLVTGGEQIGTKG 707
>gb|DR681990.1|DR681990 EST1072065 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA487 3' end, mRNA sequence
Length = 730
Score = 138 bits (296), Expect(2) = 8e-038
Identities = 57/119 (47%), Positives = 75/119 (63%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PTVF+ V++DM IA +EIFGP+ ++KFK + E I RAN T YGL AGV T+ +
Sbjct: 373 KGFYIMPTVFSEVQDDMPIATDEIFGPIQSILKFKDINEVIKRANGTDYGLAAGVFTKSM 552
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPL 115
D NC+ + PFGG KMSG G+ +G++ L YL VK+VVTPL
Sbjct: 553 DTANTLTRALRAGSIWINCFHIFDAGVPFGGYKMSGTGRQKGIYGLQSYLQVKAVVTPL 729
Score = 38.6 bits (78), Expect(2) = 8e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q+ +++SYI GK GA L+TGG G +G
Sbjct: 289 QFNKIMSYIKAGKESGAKLVTGGEQIGTKG 378
>gb|CO367200.1|CO367200 RTK1_32_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_G05_A029 5', mRNA sequence
Length = 803
Score = 125 bits (268), Expect(2) = 1e-036
Identities = 54/117 (46%), Positives = 70/117 (59%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGY+++PTVF +VK M IA+EEIFGPVM ++ FK ++E I RAN T YGLGA V T+D+
Sbjct: 385 KGYFVQPTVFADVKNSMKIAQEEIFGPVMSILPFKDIDEVIKRANSTSYGLGAAVFTKDI 206
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVT 121
NCY + PFGG K SG G++ G L YL K+VV+
Sbjct: 205 QKAHHLTNKLRAGTVYVNCYDVFDASLPFGGFKNSGLGRELGEEGLRAYLENKTVVS 35
Score = 82.2 bits (173), Expect(2) = 3e-021
Identities = 52/115 (45%), Positives = 57/115 (49%)
Frame = +2 / +3
Query: 125 TTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRV 304
TT L +R PSS P+P L+PPKG *Q T T PAR L A S V
Sbjct: 39 TTVLFSR*ARRPSSPSSRPRPEFLKPPKGNEASKTS*QLT*TVPARNLLVRW*AF*MSLV 218
Query: 305 TTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
T AP P V A + SS L MTGPKISS A+ M LT KTVG *P
Sbjct: 219 KTAAPKP*LVLLARLMTSSMSLKGKMLMTGPKISS*AIFMLFLTSAKTVGCTK*P 383
Score = 47.8 bits (98), Expect(2) = 1e-036
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+++VLSYI GK+EGATL TGG G +G
Sbjct: 475 KDQFDKVLSYIASGKKEGATLTTGGARVGDKG 380
Score = 39.1 bits (79), Expect(2) = 3e-021
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P P PPV RVAPS LP +*LRTLS *+L
Sbjct: 381 PLSPTRAPPVVRVAPSFLPEAI*LRTLSN*SL 476
>gb|CO200457.1|CO200457 GEO2_7_C07.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C07_A032 5', mRNA sequence
Length = 806
Score = 119 bits (255), Expect(2) = 3e-036
Identities = 49/98 (50%), Positives = 63/98 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YIEPT+F++V+EDM I KEEIFGPVM + KF+ +EEAI N T YGL AG+ ++++
Sbjct: 511 KGFYIEPTIFSHVQEDMKIGKEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIASKNI 690
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFG 178
D NCY + D PFGG KMSG G
Sbjct: 691 DTVNRISRSIRAGVIWVNCYHVVFPDAPFGGYKMSGIG 804
Score = 51.9 bits (107), Expect(2) = 3e-036
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -1 / +1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+E++L YI HGKREGA LLTGG G +G
Sbjct: 421 KTQFEKILEYIEHGKREGAKLLTGGSRVGEKG 516
>gb|DR177769.1|DR177769 RTMNUT1_7_F08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_7_F08_A029 3', mRNA sequence
Length = 775
Score = 149 bits (320), Expect = 2e-035
Identities = 61/133 (45%), Positives = 86/133 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
+G+YI+PTVF++VK+DM IAK EIFGPV ++KFK ++E I RAN T YGL AG+ + ++
Sbjct: 115 RGFYIQPTVFSDVKDDMAIAKYEIFGPVQTILKFKTLDEVIQRANATHYGLAAGIFSNNI 294
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
NCYF + PFGG KMSGFG+++G++ L YL VKSVV+ L
Sbjct: 295 HTINTLSRALRVGTVWVNCYFVFDAAIPFGGYKMSGFGREKGIYCLQNYLQVKSVVSTLE 474
Query: 111 ASPWI*FSLISGV 73
W+* S+ + +
Sbjct: 475 NPAWL*SSVFTSL 513
>gb|BX249261.1|BX249261 BX249261 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP022A02 similar to ALDEHYDE DEHYDROGENASE,
MITOCHONDRIAL, mRNA sequence
Length = 654
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 624 KGFYIMPTIFSEVKDDMTIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 445
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 444 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 265
Query: 111 ASPWI* 94
W+*
Sbjct: 264 NPAWL* 247
Score = 110 bits (235), Expect = 8e-024
Identities = 61/117 (52%), Positives = 66/117 (56%)
Frame = +2 / +2
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L +P SLP PLIL PPKG Q T T P R FA SR
Sbjct: 272 GETTALTCK*LLRL*IPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSRF 451
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM+MSSLT K VG +* P
Sbjct: 452 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMVMSSLTSEKMVGII*KP 622
>gb|BQ634345.1|BQ634345 NXRV067_G08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_G08 5' similar to Arabidopsis thaliana
sequence At1g23800 putative aldehyde dehydrogenase NAD+
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 779
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 217 KGFYIMPTIFSEVKDDMAIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 396
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 397 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 576
Query: 111 ASPWI* 94
W+*
Sbjct: 577 NPAWL* 594
Score = 109 bits (232), Expect = 2e-023
Identities = 61/117 (52%), Positives = 65/117 (55%)
Frame = +2 / -1
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L MP SLP PLIL PPKG Q T T P R FA S+
Sbjct: 569 GETTALTCK*LLRL*MPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSKF 390
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM MSSLT K VG +* P
Sbjct: 389 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMAMSSLTSEKMVGII*KP 219
>gb|CF668401.1|CF668401 RTCNT1_36_F09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F09_A029 3', mRNA sequence
Length = 830
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 245 KGFYIMPTIFSEVKDDMAIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 424
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 425 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 604
Query: 111 ASPWI* 94
W+*
Sbjct: 605 NPAWL* 622
Score = 109 bits (232), Expect = 2e-023
Identities = 61/117 (52%), Positives = 65/117 (55%)
Frame = +2 / -3
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L MP SLP PLIL PPKG Q T T P R FA S+
Sbjct: 597 GETTALTCK*LLRL*MPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSKF 418
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM MSSLT K VG +* P
Sbjct: 417 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMAMSSLTSEKMVGII*KP 247
>gb|CF668484.1|CF668484 RTCNT1_36_F09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F09_A029 5', mRNA sequence
Length = 802
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 347 KGFYIMPTIFSEVKDDMAIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 526
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 527 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 706
Query: 111 ASPWI* 94
W+*
Sbjct: 707 NPAWL* 724
Score = 109 bits (232), Expect = 2e-023
Identities = 61/117 (52%), Positives = 65/117 (55%)
Frame = +2 / -2
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L MP SLP PLIL PPKG Q T T P R FA S+
Sbjct: 699 GETTALTCK*LLRL*MPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSKF 520
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM MSSLT K VG +* P
Sbjct: 519 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMAMSSLTSEKMVGII*KP 349
>gb|CF669555.1|CF669555 RTCNT1_44_H12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_44_H12_A029 3', mRNA sequence
Length = 720
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 88 KGFYIMPTIFSEVKDDMAIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 267
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 268 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 447
Query: 111 ASPWI* 94
W+*
Sbjct: 448 NPAWL* 465
Score = 109 bits (232), Expect = 2e-023
Identities = 61/117 (52%), Positives = 65/117 (55%)
Frame = +2 / -2
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L MP SLP PLIL PPKG Q T T P R FA S+
Sbjct: 440 GETTALTCK*LLRL*MPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSKF 261
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM MSSLT K VG +* P
Sbjct: 260 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMAMSSLTSEKMVGII*KP 90
>gb|CO170424.1|CO170424 NDL1_14_C04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_14_C04_A029 3', mRNA sequence
Length = 756
Score = 147 bits (315), Expect = 8e-035
Identities = 60/126 (47%), Positives = 85/126 (67%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KG+YI PT+F+ VK+DM IA +EIFGPV ++KFK ++E I RAN TRYGL AGV T++L
Sbjct: 123 KGFYIMPTIFSEVKDDMAIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNL 302
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
+ NC+ + PFGG KMSG G+++G+++L+ YL VK+VV+PL+
Sbjct: 303 ETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLK 482
Query: 111 ASPWI* 94
W+*
Sbjct: 483 NPAWL* 500
Score = 109 bits (232), Expect = 2e-023
Identities = 61/117 (52%), Positives = 65/117 (55%)
Frame = +2 / -3
Query: 119 GVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRS 298
G TT LT + L MP SLP PLIL PPKG Q T T P R FA S+
Sbjct: 475 GETTALTCK*LLRL*MPFSLPVPLIL*PPKGIPASKMSKQLTQTVPTRNARVREFAVSKF 296
Query: 299 RVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA P RV+FA I SS LNFI TGP ISS AM MSSLT K VG +* P
Sbjct: 295 FVNTPAAKP*RVAFARFITSSKVLNFIIDCTGPNISSVAMAMSSLTSEKMVGII*KP 125
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 238,526,055
Number of Sequences: 355925
Number of extensions: 2960957
Number of successful extensions: 40079
Number of sequences better than 1.0e-020: 138
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 8086761930
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)