TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448655.2.1
(682 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV031633.1|CV031633 RTNACL1_2_F07.g1_A029 Roots plus add... 281 5e-075
gb|DR092962.1|DR092962 STRR1_5_E03.b1_A033 Stem Response Re... 281 5e-075
gb|DR093044.1|DR093044 STRR1_5_E03.g1_A033 Stem Response Re... 281 5e-075
gb|DR118494.1|DR118494 RTMG1_17_H05.b1_A029 Roots minus mag... 281 5e-075
dbj|BD273071.1| Materials and methods for the modification ... 278 2e-074
gb|CO175416.1|CO175416 NDL1_54_D01.g1_A029 Needles control ... 275 2e-073
gb|CF663414.1|CF663414 RTCNT1_2_E05.g1_A029 Root control Pi... 270 1e-071
gb|CO175343.1|CO175343 NDL1_54_D01.b1_A029 Needles control ... 256 1e-067
gb|CO366765.1|CO366765 RTK1_29_H12.g1_A029 Roots minus pota... 252 2e-066
gb|CX647228.1|CX647228 COLD1_14_B03.g1_A029 Root cold Pinus... 241 3e-063
dbj|BD272970.1| Materials and methods for the modification ... 222 2e-057
gb|DT634318.1|DT634318 EST1149249 Normalized pine embryo li... 198 4e-050
gb|DR693137.1|DR693137 EST1083225 Normalized pine embryo li... 188 5e-047
gb|DR687871.1|DR687871 EST1077954 Normalized pine embryo li... 176 2e-043
gb|DR681790.1|DR681790 EST1071865 Normalized pine embryo li... 164 5e-040
gb|DR019196.1|DR019196 STRS1_28_A02.g1_A034 Shoot tip pitch... 163 1e-039
gb|DR079207.1|DR079207 RTFEPL1_9_F09.g1_A029 Roots plus add... 163 1e-039
gb|DR179202.1|DR179202 RTMNUT1_16_D10.g1_A029 Roots minus m... 163 1e-039
gb|DR694320.1|DR694320 EST1084412 Normalized pine embryo li... 163 1e-039
gb|DT638113.1|DT638113 EST1153044 Normalized pine embryo li... 159 2e-038
gb|DR120277.1|DR120277 RTMG1_28_D11.g2_A029 Roots minus mag... 155 3e-037
gb|DR079131.1|DR079131 RTFEPL1_9_F09.b1_A029 Roots plus add... 144 4e-034
gb|DR684177.1|DR684177 EST1074254 Normalized pine embryo li... 128 3e-029
gb|DR179128.1|DR179128 RTMNUT1_16_D10.b1_A029 Roots minus m... 116 1e-025
dbj|BD273072.1| Materials and methods for the modification ... 116 1e-025
gb|DR118577.1|DR118577 RTMG1_17_H05.g1_A029 Roots minus mag... 115 4e-025
gb|CV031549.1|CV031549 RTNACL1_2_F07.b1_A029 Roots plus add... 105 3e-022
gb|DR693249.1|DR693249 EST1083337 Normalized pine embryo li... 102 3e-021
>gb|CV031633.1|CV031633 RTNACL1_2_F07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F07_A029 5', mRNA sequence
Length = 788
Score = 281 bits (607), Expect = 5e-075
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 338 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 517
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKL 361
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K
Sbjct: 518 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKA 697
Query: 362 KDL 370
++L
Sbjct: 698 REL 706
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 666 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 487
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 486 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 337
Score = 137 bits (293), Expect = 1e-031
Identities = 53/111 (47%), Positives = 81/111 (72%)
Frame = -1 / -2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 670 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 491
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 490 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHL*PMCIWSSKTHWSSELMVN 338
>gb|DR092962.1|DR092962 STRR1_5_E03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_E03_A033 3', mRNA sequence
Length = 823
Score = 281 bits (607), Expect = 5e-075
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 31 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 210
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKL 361
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K
Sbjct: 211 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKA 390
Query: 362 KDL 370
++L
Sbjct: 391 REL 399
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 359 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 180
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 179 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 30
Score = 140 bits (301), Expect = 8e-033
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -1 / -2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +S
Sbjct: 363 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNSF 184
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 183 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHLRPMCIWSSKTHWSSELMVN 31
>gb|DR093044.1|DR093044 STRR1_5_E03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_E03_A033 5', mRNA sequence
Length = 894
Score = 281 bits (607), Expect = 5e-075
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 512 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 691
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKL 361
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K
Sbjct: 692 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKA 871
Query: 362 KDL 370
++L
Sbjct: 872 REL 880
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -1
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 840 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 661
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 660 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 511
Score = 140 bits (301), Expect = 8e-033
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -1 / -3
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +S
Sbjct: 844 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNSF 665
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 664 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHLRPMCIWSSKTHWSSELMVN 512
>gb|DR118494.1|DR118494 RTMG1_17_H05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H05_A029 3', mRNA sequence
Length = 814
Score = 281 bits (607), Expect = 5e-075
Identities = 104/123 (84%), Positives = 115/123 (93%)
Frame = +2 / +3
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 54 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 233
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKL 361
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K
Sbjct: 234 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKA 413
Query: 362 KDL 370
++L
Sbjct: 414 REL 422
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -1
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 382 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 203
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 202 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 53
Score = 140 bits (301), Expect = 8e-033
Identities = 54/111 (48%), Positives = 82/111 (73%)
Frame = -1 / -3
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +S
Sbjct: 386 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNSF 207
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 206 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHLRPMCIWSSKTHWSSELMVN 54
>dbj|BD273071.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 631
Score = 278 bits (602), Expect = 2e-074
Identities = 103/122 (84%), Positives = 114/122 (93%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 196 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWCWVVLRQVEAIETHSGY 375
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKL 361
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K
Sbjct: 376 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKA 555
Query: 362 KD 367
++
Sbjct: 556 RE 561
Score = 169 bits (363), Expect = 2e-041
Identities = 83/110 (75%), Positives = 88/110 (80%)
Frame = -2 / -3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 524 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 345
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q QNVIM PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 344 WRSTTQHQNVIMCPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 195
Score = 135 bits (290), Expect = 3e-031
Identities = 53/111 (47%), Positives = 80/111 (72%)
Frame = -1 / -2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 528 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 349
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NP PEC+HV+W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 348 HLAQHNPAPECNHVSWSNCRSDKRRDPQYQHL*PMCIWSSKTHWSSELMVN 196
>gb|CO175416.1|CO175416 NDL1_54_D01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_D01_A029 5', mRNA sequence
Length = 709
Score = 275 bits (596), Expect = 2e-073
Identities = 102/117 (87%), Positives = 111/117 (94%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 355 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 534
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYL 352
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L
Sbjct: 535 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHL 705
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 683 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 504
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 503 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 354
Score = 137 bits (293), Expect = 1e-031
Identities = 53/111 (47%), Positives = 81/111 (72%)
Frame = -1 / -2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 687 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 508
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 507 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHL*PMCIWSSKTHWSSELMVN 355
>gb|CF663414.1|CF663414 RTCNT1_2_E05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_2_E05_A029 5', mRNA sequence
Length = 790
Score = 270 bits (583), Expect = 1e-071
Identities = 100/111 (90%), Positives = 107/111 (96%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 457 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 636
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR
Sbjct: 637 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 789
Score = 168 bits (361), Expect = 4e-041
Identities = 82/110 (74%), Positives = 89/110 (80%)
Frame = -2 / -3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 785 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 606
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 605 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 456
Score = 137 bits (293), Expect = 1e-031
Identities = 53/111 (47%), Positives = 81/111 (72%)
Frame = -1 / -2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 789 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 610
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 609 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHL*PMCIWSSKTHWSSELMVN 457
>gb|CO175343.1|CO175343 NDL1_54_D01.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_54_D01_A029 3', mRNA sequence
Length = 687
Score = 256 bits (553), Expect = 1e-067
Identities = 95/113 (84%), Positives = 105/113 (92%)
Frame = +2 / +1
Query: 32 FAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGFDFPFTPTKYI 211
FAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+DFP+T TK I
Sbjct: 1 FAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLI 180
Query: 212 PFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKLKDL 370
PFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K ++L
Sbjct: 181 PFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKAREL 339
Score = 144 bits (309), Expect = 6e-034
Identities = 72/99 (72%), Positives = 79/99 (79%)
Frame = -2 / -2
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 299 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 120
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAA 34
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA
Sbjct: 119 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAA 3
Score = 118 bits (252), Expect = 4e-026
Identities = 46/99 (46%), Positives = 71/99 (71%)
Frame = -1 / -1
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 303 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 124
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWS 38
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS
Sbjct: 123 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHL*PMCIWS 7
>gb|CO366765.1|CO366765 RTK1_29_H12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_29_H12_A029 5', mRNA sequence
Length = 789
Score = 252 bits (544), Expect = 2e-066
Identities = 94/112 (83%), Positives = 103/112 (91%)
Frame = +2 / -2
Query: 35 AAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGFDFPFTPTKYIP 214
AAPYAHW EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+DFP+T TK IP
Sbjct: 788 AAPYAHWFEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLIP 609
Query: 215 FYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKLKDL 370
FYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K ++L
Sbjct: 608 FYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKAREL 453
Score = 144 bits (309), Expect = 6e-034
Identities = 72/99 (72%), Positives = 79/99 (79%)
Frame = -2 / +1
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 493 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 672
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAA 34
RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA
Sbjct: 673 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSNQCAYGAA 789
Score = 122 bits (261), Expect = 3e-027
Identities = 47/99 (47%), Positives = 72/99 (72%)
Frame = -1 / +3
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +S
Sbjct: 489 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNSF 668
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPVCIWS 38
HL ++NPEPEC+H++W+N D+ D +YQHL P+CIWS
Sbjct: 669 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHLKPMCIWS 785
>gb|CX647228.1|CX647228 COLD1_14_B03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_14_B03_A029 5', mRNA sequence
Length = 638
Score = 241 bits (521), Expect = 3e-063
Identities = 89/107 (83%), Positives = 99/107 (92%)
Frame = +2 / -2
Query: 50 HWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGFDFPFTPTKYIPFYGGA 229
HW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+DFP+T TK IPFYGGA
Sbjct: 637 HWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGYDFPWTLTKLIPFYGGA 458
Query: 230 EYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKLKDL 370
EYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K ++L
Sbjct: 457 EYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKAREL 317
Score = 133 bits (284), Expect = 2e-030
Identities = 67/94 (71%), Positives = 74/94 (78%)
Frame = -2 / +3
Query: 330 *PLSVPYK*SQ*VKTEAKLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST 151
*PLSVPYK*SQ V TEAKLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST
Sbjct: 357 *PLSVPYK*SQYVNTEAKLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIAST 536
Query: 150 *RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQC 49
RS Q+QNVI+ PG +AGPT G+P+I+TS QC
Sbjct: 537 WRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQC 638
Score = 105 bits (224), Expect = 3e-022
Identities = 42/95 (44%), Positives = 67/95 (70%)
Frame = -1 / +2
Query: 334 SVTFVSAI*VITVSENRSKIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSL 155
+VT +S +*+ITV E+ K+AL L+SYIMM+VM+ +SIE N + ++ +A+ +
Sbjct: 353 AVTLISPV*IITVCEH*GKVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRF 532
Query: 154 HLTEYNPEPECDHVAWNNGWPDEGGDAEYQHLSPV 50
HL ++NPEPEC+H++W+N D+ D +YQHL P+
Sbjct: 533 HLAQHNPEPECNHMSWSNCRSDKRRDPQYQHL*PM 637
>dbj|BD272970.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 474
Score = 222 bits (479), Expect = 2e-057
Identities = 82/93 (88%), Positives = 89/93 (95%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 196 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWCWVVLRQVEAIETHSGY 375
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNF 280
DFP+T TK IPFYGGAEYHDYHHYVGGQSQSNF
Sbjct: 376 DFPWTLTKLIPFYGGAEYHDYHHYVGGQSQSNF 474
Score = 140 bits (300), Expect = 1e-032
Identities = 68/93 (73%), Positives = 73/93 (78%)
Frame = -2 / -2
Query: 279 KLLWLWPPT****SWYSAPP*NGIYFVGVNGKSKPLCVSIAST*RSIIQSQNVIMWPGTM 100
KLL L PPT** *S YSAPP* GI V V+GKS PL VSIAST RS Q QNVIM PG +
Sbjct: 473 KLL*LCPPT**W*S*YSAPP*KGINLVRVHGKSYPL*VSIASTWRSTTQHQNVIMCPGAI 294
Query: 99 AGPTKEGMPSISTSAQCAYGAANPIGAVNSW*T 1
AGPT G+P+I+TS QCAYGAA PIGAVNSW*T
Sbjct: 293 AGPTNVGIPNINTSDQCAYGAAKPIGAVNSW*T 195
Score = 118 bits (253), Expect = 3e-026
Identities = 45/93 (48%), Positives = 67/93 (72%)
Frame = -1 / -1
Query: 280 KIALALASYIMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSLHLTEYNPEPECDHVAWNN 101
K+AL L+SYIMM+VM+ +SIE N + ++ +A+ + HL ++NP PEC+HV+W+N
Sbjct: 474 KVALTLSSYIMMVVMILRASIERN*FGKSPRKVISAVSFNRFHLAQHNPAPECNHVSWSN 295
Query: 100 GWPDEGGDAEYQHLSPVCIWSCESYWRSELMVN 2
D+ D +YQHL P+CIWS +++W SELMVN
Sbjct: 294 CRSDKRRDPQYQHL*PMCIWSSKTHWSSELMVN 196
>gb|DT634318.1|DT634318 EST1149249 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG467 3' end, mRNA sequence
Length = 804
Score = 198 bits (426), Expect = 4e-050
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 553 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 732
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHY 253
DFP+T TK IPFYG AEYHDYHHY
Sbjct: 733 DFPWTLTKLIPFYGRAEYHDYHHY 804
Score = 122 bits (261), Expect = 3e-027
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -2 / -2
Query: 243 *SWYSAPP*NGIYFVGVNGKSKPLCVSIAST*RSIIQSQNVIMWPGTMAGPTKEGMPSIS 64
*S YSA P* GI V V+GKS PL VSIAST RS Q+QNVI+ PG +AGPT G+P+I+
Sbjct: 794 *S*YSARP*KGINLVRVHGKSYPL*VSIASTWRSTTQNQNVIICPGAIAGPTNVGIPNIN 615
Query: 63 TSAQCAYGAANPIGAVNSW*T 1
TS QCAYGAA PIGAVNSW*T
Sbjct: 614 TSDQCAYGAAKPIGAVNSW*T 552
Score = 105 bits (224), Expect = 3e-022
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = -1 / -1
Query: 253 IMMIVMVFCSSIEWNILCRGEWEIKAAMCLDSLHLTEYNPEPECDHVAWNNGWPDEGGDA 74
IMM+VM+ +SIE N + ++ +A+ + HL ++NPEPEC+H++W+N D+ D
Sbjct: 804 IMMVVMILRASIERN*FGKSPRKVISAVSFNRFHLAQHNPEPECNHMSWSNCRSDKRRDP 625
Query: 73 EYQHLSPVCIWSCESYWRSELMVN 2
+YQHL P+CIWS +++W SELMVN
Sbjct: 624 QYQHL*PMCIWSSKTHWSSELMVN 553
>gb|DR693137.1|DR693137 EST1083225 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADV18 3' end, mRNA sequence
Length = 785
Score = 188 bits (404), Expect = 5e-047
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 545 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 724
Query: 182 DFPFTPTKYIPFYGGAEYHD 241
DFP+T TK IPFYGGAEYHD
Sbjct: 725 DFPWTLTKLIPFYGGAEYHD 784
Score = 126 bits (269), Expect = 2e-028
Identities = 56/78 (71%), Positives = 63/78 (80%)
Frame = -2 / -3
Query: 234 YSAPP*NGIYFVGVNGKSKPLCVSIAST*RSIIQSQNVIMWPGTMAGPTKEGMPSISTSA 55
YSAPP* GI V V+GKS PL VSIAST RS Q+QNVI+ PG +AGPT G+P+I+TS
Sbjct: 777 YSAPP*KGINLVRVHGKSYPL*VSIASTWRSTTQNQNVIICPGAIAGPTNVGIPNINTSD 598
Query: 54 QCAYGAANPIGAVNSW*T 1
QCAYGAA PIGAVNSW*T
Sbjct: 597 QCAYGAAKPIGAVNSW*T 544
>gb|DR687871.1|DR687871 EST1077954 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABX56 3' end, mRNA sequence
Length = 774
Score = 176 bits (378), Expect = 2e-043
Identities = 65/76 (85%), Positives = 72/76 (94%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 545 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 724
Query: 182 DFPFTPTKYIPFYGGA 229
DFP+T TK IPFYGGA
Sbjct: 725 DFPWTLTKLIPFYGGA 772
Score = 122 bits (262), Expect = 2e-027
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = -2 / -1
Query: 231 SAPP*NGIYFVGVNGKSKPLCVSIAST*RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQ 52
SAPP* GI V V+GKS PL VSIAST RS Q+QNVI+ PG +AGPT G+P+I+TS Q
Sbjct: 774 SAPP*KGINLVRVHGKSYPL*VSIASTWRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQ 595
Query: 51 CAYGAANPIGAVNSW*T 1
CAYGAA PIGAVNSW*T
Sbjct: 594 CAYGAAKPIGAVNSW*T 544
>gb|DR681790.1|DR681790 EST1071865 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA171 3' end, mRNA sequence
Length = 729
Score = 164 bits (353), Expect = 5e-040
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 203 VHHEYATPFGLTSEYAHLAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 382
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 383 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 535
>gb|DR019196.1|DR019196 STRS1_28_A02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_A02_A034 5', mRNA sequence
Length = 824
Score = 163 bits (351), Expect = 1e-039
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 487 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 666
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 667 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 819
>gb|DR079207.1|DR079207 RTFEPL1_9_F09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F09_A029 5', mRNA sequence
Length = 804
Score = 163 bits (351), Expect = 1e-039
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 196 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 375
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 376 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 528
>gb|DR179202.1|DR179202 RTMNUT1_16_D10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_D10_A029 5', mRNA sequence
Length = 761
Score = 163 bits (351), Expect = 1e-039
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +2 / +3
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 198 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 377
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 378 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 530
>gb|DR694320.1|DR694320 EST1084412 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEA88 3' end, mRNA sequence
Length = 823
Score = 163 bits (351), Expect = 1e-039
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +2 / +3
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 483 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 662
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 663 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 815
>gb|DT638113.1|DT638113 EST1153044 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHB28 3' end, mRNA sequence
Length = 836
Score = 159 bits (342), Expect = 2e-038
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++LRQVEAIETHSG+
Sbjct: 620 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVVLRQVEAIETHSGY 799
Query: 182 DFPFTPTKYI 211
DFP+T TK I
Sbjct: 800 DFPWTLTKLI 829
Score = 109 bits (233), Expect = 2e-023
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = -2 / -3
Query: 210 IYFVGVNGKSKPLCVSIAST*RSIIQSQNVIMWPGTMAGPTKEGMPSISTSAQCAYGAAN 31
I V V+GKS PL VSIAST RS Q+QNVI+ PG +AGPT G+P+I+TS QCAYGAA
Sbjct: 828 INLVRVHGKSYPL*VSIASTWRSTTQNQNVIICPGAIAGPTNVGIPNINTSDQCAYGAAK 649
Query: 30 PIGAVNSW*T 1
PIGAVNSW*T
Sbjct: 648 PIGAVNSW*T 619
>gb|DR120277.1|DR120277 RTMG1_28_D11.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_D11_A029 5', mRNA sequence
Length = 519
Score = 155 bits (333), Expect = 3e-037
Identities = 55/111 (49%), Positives = 75/111 (67%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 176 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 355
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
DFP++ +K P YGGA++ YHH + N++S FTY D+L+GTDKGYR
Sbjct: 356 DFPWSISKLFPLYGGADFFFYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 508
>gb|DR079131.1|DR079131 RTFEPL1_9_F09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F09_A029 3', mRNA sequence
Length = 812
Score = 144 bits (310), Expect = 4e-034
Identities = 51/97 (52%), Positives = 69/97 (71%)
Frame = +2 / +2
Query: 44 YAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGFDFPFTPTKYIPFYG 223
YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+DFP++ +K P YG
Sbjct: 11 YAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFPLYG 190
Query: 224 GAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR 334
GA++HDYHH + N++S FTY D+L+GTDKGYR
Sbjct: 191 GADFHDYHHRLLYTKSGNYSSTFTYMDWLFGTDKGYR 301
>gb|DR684177.1|DR684177 EST1074254 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP73 3' end, mRNA sequence
Length = 820
Score = 128 bits (275), Expect = 3e-029
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWIILRQVEAIETHSGF 181
VHHE+ P G + YAH AE+L LG + +GPAI H+ T WLW+ LR +E +E H G+
Sbjct: 539 VHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLFTLWLWMSLRVLETVEAHCGY 718
Query: 182 DFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFA 283
DFP++ +K P YGGA++HDYHH + N++
Sbjct: 719 DFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYS 820
>gb|DR179128.1|DR179128 RTMNUT1_16_D10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_D10_A029 3', mRNA sequence
Length = 786
Score = 116 bits (249), Expect = 1e-025
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +2 / +1
Query: 113 HMITFWLWIILRQVEAIETHSGFDFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVF 292
H+ T WLW+ LR +E +E H G+DFP++ +K P YGGA++HDYHH + N++S F
Sbjct: 1 HLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTF 180
Query: 293 TYCDYLYGTDKGYR 334
TY D+L+GTDKGYR
Sbjct: 181 TYMDWLFGTDKGYR 222
>dbj|BD273072.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 362
Score = 116 bits (249), Expect = 1e-025
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +2 / +2
Query: 113 HMITFWLWIILRQVEAIETHSGFDFPFTPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVF 292
H+ T WLW+ LR +E +E H G+DFP++ +K P YGGA++HDYHH + N++S F
Sbjct: 8 HLFTLWLWMSLRVLETVEAHCGYDFPWSISKLFPLYGGADFHDYHHRLLYTKSGNYSSTF 187
Query: 293 TYCDYLYGTDKGYR 334
TY D+L+GTDKGYR
Sbjct: 188 TYMDWLFGTDKGYR 229
>gb|DR118577.1|DR118577 RTMG1_17_H05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_H05_A029 5', mRNA sequence
Length = 626
Score = 115 bits (245), Expect = 4e-025
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +2 / +2
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITFWLWII 142
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITFW W++
Sbjct: 485 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITFWFWVV 625
>gb|CV031549.1|CV031549 RTNACL1_2_F07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F07_A029 3', mRNA sequence
Length = 488
Score = 105 bits (224), Expect = 3e-022
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2 / +3
Query: 233 YHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKLKDL 370
YHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYR+ K +L K ++L
Sbjct: 3 YHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRYRKEHLLKAREL 140
>gb|DR693249.1|DR693249 EST1083337 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADW75 3' end, mRNA sequence
Length = 750
Score = 102 bits (217), Expect = 3e-021
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2 / +1
Query: 2 VHHEFTAPIGFAAPYAHWAEVLILGIPSFVGPAIVPGHMITF 127
VHHEFTAP+GFAAPYAHW+EVLILGIP+FVGPAI PGHMITF
Sbjct: 625 VHHEFTAPMGFAAPYAHWSEVLILGIPTFVGPAIAPGHMITF 750
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 392,821,223
Number of Sequences: 355925
Number of extensions: 6232146
Number of successful extensions: 46482
Number of sequences better than 1.0e-020: 28
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9381670230
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)