TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805022.2.2
(1462 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO167375.1|CO167375 FLD1_68_C08.g1_A029 Root flooded Pin... 560 e-158
gb|DT632301.1|DT632301 EST1147232 Normalized pine embryo li... 532 e-150
gb|DR684764.1|DR684764 EST1074841 Normalized pine embryo li... 530 e-150
gb|DR167749.1|DR167749 RTPHOS1_20_F10.g1_A029 Roots minus p... 387 e-107
gb|DR102410.1|DR102410 STRR1_80_H05.g1_A033 Stem Response R... 371 e-102
gb|CO170284.1|CO170284 NDL1_13_A07.b1_A029 Needles control ... 303 1e-099
gb|CF663545.1|CF663545 RTCNT1_3_C03.g1_A029 Root control Pi... 318 1e-086
gb|CO158311.1|CO158311 FLD1_6_C12.b1_A029 Root flooded Pinu... 320 2e-086
gb|DR385753.1|DR385753 RTHG1_10_D07.g1_A029 Roots plus adde... 308 6e-083
gb|DR012570.1|DR012570 HEAT1_13_E05.g1_A029 Root at 37 C fo... 290 1e-077
gb|DR386705.1|DR386705 RTHG1_17_A06.b1_A029 Roots plus adde... 264 8e-070
gb|DR745849.1|DR745849 RTCU1_33_B06.b1_A029 Roots plus adde... 255 4e-067
gb|CO167298.1|CO167298 FLD1_68_C08.b1_A029 Root flooded Pin... 251 1e-065
gb|DR385000.1|DR385000 RTHG1_6_B04.b1_A029 Roots plus added... 251 1e-065
gb|DR385676.1|DR385676 RTHG1_10_D07.b1_A029 Roots plus adde... 219 4e-056
gb|CO158389.1|CO158389 FLD1_6_C12.g1_A029 Root flooded Pinu... 185 6e-054
gb|DR102334.1|DR102334 STRR1_80_H05.b1_A033 Stem Response R... 183 2e-045
gb|DR069137.1|DR069137 RTDK1_5_D09.b1_A029 Roots, dark Pinu... 161 8e-039
gb|DR069213.1|DR069213 RTDK1_5_D09.g1_A029 Roots, dark Pinu... 149 3e-035
gb|DR078088.1|DR078088 RTFEPL1_1_G10.g1_A029 Roots plus add... 99 2e-033
gb|DR744318.1|DR744318 RTCU1_21_E04.g1_A029 Roots plus adde... 116 4e-033
gb|DR092906.1|DR092906 STRR1_4_G04.g1_A033 Stem Response Re... 74 6e-033
gb|CO163346.1|CO163346 FLD1_41_B05.b1_A029 Root flooded Pin... 88 6e-033
gb|DR177472.1|DR177472 RTMNUT1_5_B10.g1_A029 Roots minus mi... 86 2e-032
gb|DR011778.1|DR011778 HEAT1_7_G09.g1_A029 Root at 37 C for... 99 1e-031
gb|DR021932.1|DR021932 STRS1_47_G01.g1_A034 Shoot tip pitch... 133 2e-030
gb|DT634175.1|DT634175 EST1149106 Normalized pine embryo li... 133 3e-030
gb|CO197545.1|CO197545 GEO1_7_F05.b1_A029 Root gravitropism... 132 6e-030
gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus add... 99 1e-029
gb|CO200457.1|CO200457 GEO2_7_C07.g1_A032 Root gravitropism... 88 3e-029
gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus add... 98 3e-029
gb|CF395276.1|CF395276 RTDS2_10_G06.g1_A021 Drought-stresse... 98 3e-029
gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism... 98 3e-029
gb|DR117730.1|DR117730 RTMG1_8_G01.g1_A029 Roots minus magn... 100 5e-029
gb|CF393010.1|CF393010 RTDR3_18_E06.g1_A022 Loblolly pine r... 85 9e-028
gb|DR386197.1|DR386197 RTHG1_13_C02.g1_A029 Roots plus adde... 102 1e-027
gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C fo... 89 7e-027
gb|BX680375.1|BX680375 BX680375 RS Pinus pinaster cDNA clon... 88 7e-027
gb|DR695015.1|DR695015 EST1085108 Normalized pine embryo li... 89 8e-027
gb|DT638958.1|DT638958 EST1153889 Normalized pine embryo li... 89 8e-027
gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus ni... 89 1e-026
gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus add... 89 1e-026
gb|DR056038.1|DR056038 RTCA1_27_E03.g1_A029 Roots minus cal... 71 1e-025
gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism... 82 8e-025
gb|CF393189.1|CF393189 RTDR3_17_E11.g1_A022 Loblolly pine r... 79 8e-025
gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pin... 79 5e-024
gb|DR053556.1|DR053556 RTCA1_11_H08.g1_A029 Roots minus cal... 90 9e-024
gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine ro... 79 1e-023
gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus m... 79 1e-023
gb|DR687598.1|DR687598 EST1077680 Normalized pine embryo li... 80 2e-023
gb|DR692338.1|DR692338 EST1082426 Normalized pine embryo li... 109 4e-023
gb|DR179164.1|DR179164 RTMNUT1_16_H11.b1_A029 Roots minus m... 80 4e-023
gb|CF665643.1|CF665643 RTCNT1_17_G01.b1_A029 Root control P... 75 2e-022
gb|DR011698.1|DR011698 HEAT1_7_G09.b1_A029 Root at 37 C for... 52 1e-021
gb|DR056886.1|DR056886 RTNIT1_1_E04.b1_A029 Roots minus nit... 52 1e-021
gb|CF673008.1|CF673008 RTCNT1_75_A03.g1_A029 Root control P... 88 1e-021
gb|CF474860.1|CF474860 RTWW2_8_G11.g1_A021 Well-watered lob... 88 2e-021
gb|DR055965.1|DR055965 RTCA1_27_E03.b1_A029 Roots minus cal... 77 5e-021
gb|DR163121.1|DR163121 RTFE1_41_C05.b1_A029 Roots minus iro... 80 7e-021
gb|CO161127.1|CO161127 FLD1_26_G06.g1_A029 Root flooded Pin... 77 9e-021
gb|DR059511.1|DR059511 RTNIT1_18_D05.b1_A029 Roots minus ni... 69 9e-021
gb|DR078006.1|DR078006 RTFEPL1_1_G10.b1_A029 Roots plus add... 69 9e-021
>gb|CO167375.1|CO167375 FLD1_68_C08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_C08_A029 5', mRNA sequence
Length = 889
Score = 560 bits (1216), Expect = e-158
Identities = 233/286 (81%), Positives = 255/286 (89%)
Frame = +2 / +2
Query: 41 SRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 220
SRQLNGSIIPSERP HMMMEVWNPLG+ GVITAFNFPCAVLGWNACIALVCGNCVVWKGA
Sbjct: 2 SRQLNGSIIPSERPYHMMMEVWNPLGIFGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 181
Query: 221 PTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGL 400
PTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RIPLVSFTGST+ G
Sbjct: 182 PTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRIPLVSFTGSTKVGQ 361
Query: 401 MVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHE 580
+VQ+ V+ARFGKCLLELSGNNAIIVM+DAD+ + VRSVLFAAVGTAGQRCT+CRRLILHE
Sbjct: 362 IVQKAVNARFGKCLLELSGNNAIIVMEDADLAMVVRSVLFAAVGTAGQRCTSCRRLILHE 541
Query: 581 NIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGS 760
IYQ ++QL + YKQV++GDP++K TLLGPLHT ASK NF KGIQ IKSQGG IL GGS
Sbjct: 542 KIYQHIIEQLTDAYKQVKLGDPVDKDTLLGPLHTRASKLNFEKGIQVIKSQGGCILTGGS 721
Query: 761 AIESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEI 898
IE EGNFVQPTIVEI+ APVVKEELFGPVLYV+KFQTL+EAIEI
Sbjct: 722 VIEHEGNFVQPTIVEISKDAPVVKEELFGPVLYVLKFQTLEEAIEI 859
Score = 417 bits (904), Expect = e-115
Identities = 195/288 (67%), Positives = 212/288 (73%)
Frame = -2 / -2
Query: 903 LLISIASFKV*NFIT*RTGPKSSSFTTGAEGVISTIVGCTKFPSDSMADPPKRIFPP*DL 724
++ISIAS KV*NF T*RTGPKSSSFTTGA ISTIVGCTKFPS S+ +PP R+ PP*D
Sbjct: 864 IVISIASSKV*NFKT*RTGPKSSSFTTGASLDISTIVGCTKFPSCSITEPPVRMHPP*DF 685
Query: 723 IV*MPFKKFSFEAGVCSGPSKVPFSNGSPIRTCLYTSTS*SRKV*YMFS*RISLRHVVQR 544
I *MPF KFSF+A VCSGP+ V S GSP TCLY S + S Y+FS ISLR +V R
Sbjct: 684 IT*MPFSKFSFDARVCSGPNSVSLSTGSPNLTCLYASVNCSIMCWYIFSWSISLRQLVHR 505
Query: 543 CPAVPTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPVNETK 364
CPAVPTAANKTDRT SASSIT+MALFPLSS +H PNLALT *TI P VLPV ET
Sbjct: 504 CPAVPTAANKTDRTTIAKSASSITIMALFPLSSSKHFPNLALTAF*TICPTFVLPVKETN 325
Query: 363 GILMSRAIA*PISVPPQKDVKIAPGKLFFSNTLATXXXXXXXXXXXXXAPFQTTQFPQTK 184
GIL S AIA PIS PPQ VK+APGK F SNT A APFQTTQ PQTK
Sbjct: 324 GILPSSAIACPISAPPQMQVKMAPGKPFLSNTSAMSFVVAIVINGVVGAPFQTTQLPQTK 145
Query: 183 AMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRL 40
AM AF PSTA GKLNAVITP PRGF TSIII GRS+G+M+PF+ RL
Sbjct: 144 AMHAFHPSTAHGKLNAVITPNIPRGFQTSIII**GRSEGMMEPFNCRL 1
Score = 261 bits (564), Expect = 1e-068
Identities = 119/285 (41%), Positives = 180/285 (63%)
Frame = -1 / -1
Query: 895 FNCFLQGLKFHNIKDRTKEFFFHNWCRRCNFHNCWLHKVSF*FNGRSSKKDFPSLRFDSL 716
FN FLQGLK +I++R K+ F HN C FHNC LHK+ F R+++++ P+LRF +L
Sbjct: 856 FNSFLQGLKLQDIENRPKKLFLHNRCIFRYFHNCRLHKIPFMLYNRATRQNAPTLRFYNL 677
Query: 715 NAFQKVLF*SRSVQWSQ*GAFLQRIPNSDLFVYLNKLIKEGLIYVLMKNQPTTCSAALSC 536
NA KV * S+QWS F+ R+ +L + +++L+ L+Y+L++ QP+ A+LS
Sbjct: 676 NALLKVQL*CTSMQWS*QRIFINRVSQFNLLICISQLLNNVLVYLLVEYQPSATGASLSS 497
Query: 535 CTNSSEQDRSHS*LDICIIHNNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSSE*NQRYP 356
TN S+Q+RSH+ +CI HN +GIVS KFK+ KSC + LLN+ ++ SS+ +Q
Sbjct: 496 STNCSKQNRSHNHC*VCIFHNYNGIVSTKFKQTLPKSCIDCLLNNLSNLRASSKRDQWDS 317
Query: 355 NVKGNCLTNFSAPTKRCKNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNA 176
++ L N T +N Q + L + + FC SDQW STFP++TI+T+QS+A
Sbjct: 316 SIFSYRLPNLCTTTDAGENGTRQTISL*HLGYEFCCRYSDQWCSRSTFPNNTIATNQSDA 137
Query: 175 SIPTKHSTREIKCRYNTHNSKGIPHLHHHMVWSFRWYNGSI*LAT 41
IP K+ST +++C + +K IP+LHHHM+ F Y+G+I L+T
Sbjct: 136 CIPPKYSTWKVECSNYSEYTKRIPNLHHHMIRPF*RYDGAIQLST 2
Score = 195 bits (420), Expect(3) = 1e-068
Identities = 79/182 (43%), Positives = 109/182 (59%)
Frame = +1 / +1
Query: 43 SPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLWKLCRLERCS 222
S +W+H+T T YDDGG+ES W I +CC W+EC+H FGLW+LC LERCS
Sbjct: 4 STVEWLHHTFRTALSYDDGGLESSWYIRSNYCIQLSMCCTWVECMHRFGLWQLCCLERCS 183
Query: 223 NNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFIHWKYKGWSN 402
+ DHY ++K + E+ A +F++ LW +W+ + + G +WK++GW+N
Sbjct: 184 YYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLFYWKHEGWTN 363
Query: 403 GSATS*CKIW*MPS*T*RKQCHHCYG*CRYPASCAICLVRCCWYSRTTLHYMS*ADSS*E 582
S S CKIW + +*T* KQCH+ YG CR CAIC V C WY TT+H + AD+ E
Sbjct: 364 CSKGSQCKIWEVFA*T*WKQCHYSYGRCRLSNGCAICFVCCSWYCWTTMHQLPKADTPRE 543
Query: 583 HI 588
I
Sbjct: 544 DI 549
Score = 83.5 bits (176), Expect(4) = 3e-030
Identities = 54/123 (43%), Positives = 59/123 (47%)
Frame = -3 / -3
Query: 734 PEI**SECXXXXXXXKQECAVVPVRCLSPTDPQFGLVCIPQQADQGRFDICSHEESAYDM 555
PEI * EC E AVV L L + Q Q I S SA+
Sbjct: 695 PEIL*LECPSQSSALMHEYAVVLTAYLYQQGLPI*LAYMHQSTAQ*CVGISSRGVSAFGN 516
Query: 554 *CSVVLLYQQQRTRQIAQLAGYLHHP*Q*WHCFR*VQEGIYQILH*LVAEPLDQPLYFQ* 375
C VV YQ Q+T+QIAQ LH P* *WHCF *VQ QILH*L E QP FQ*
Sbjct: 515 WCIVVQQYQLQQTKQIAQPLLSLHLP*L*WHCFH*VQANTSQILH*LPFEQFVQPSCFQ* 336
Query: 374 MKP 366
+P
Sbjct: 335 KRP 327
Score = 66.1 bits (138), Expect(3) = 1e-068
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / +1
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*N 897
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N
Sbjct: 736 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*N 858
Score = 41.4 bits (84), Expect(4) = 3e-030
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = -3 / -3
Query: 896 FQLLPSRSEIS*HKGQDQRVLLSQLVQKV*FPQLLVAQSFL 774
FQ LP RSE S H+ Q Q+ L SQ V FPQL VAQ+ L
Sbjct: 857 FQ*LPPRSETSRHREQAQKALPSQQVHL*IFPQL*VAQNSL 735
Score = 39.6 bits (80), Expect(4) = 3e-030
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 209 RRHNFHRPKQCKHSNQAQHKGN*M 138
++HN H+PK+C HS Q QH +*M
Sbjct: 170 KQHNCHKPKRCMHSTQVQHMES*M 99
Score = 39.1 bits (79), Expect(3) = 1e-068
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 655 RHLTGTTAHSCFKRELFERHSDYQISG 735
R+ TTA+SC K EL E HS Y+ISG
Sbjct: 616 RYAVRTTAYSCIKAEL*EGHSSYKISG 696
Score = 31.3 bits (62), Expect(4) = 3e-030
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3 / -3
Query: 116 QGDSTPPSSYGLVVQMV*WIHLVGD 42
Q DS PPSSY V V*W H D
Sbjct: 77 QEDSKPPSSYDKAVLKV*WSHSTVD 3
>gb|DT632301.1|DT632301 EST1147232 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFI57 3' end, mRNA sequence
Length = 841
Score = 532 bits (1155), Expect = e-150
Identities = 218/268 (81%), Positives = 239/268 (89%)
Frame = +2 / +1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 37 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 216
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RI
Sbjct: 217 ALVCGNCVVWKGAPTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRI 396
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAG 541
PLVSFTGST+ G +VQ+ V+ARFGKCLLELSGNNAIIVM+DAD+ + VRSVLFAAVGTAG
Sbjct: 397 PLVSFTGSTKVGQIVQKAVNARFGKCLLELSGNNAIIVMEDADLAMVVRSVLFAAVGTAG 576
Query: 542 QRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQT 721
QRCT+CRRLILHE IYQ ++QL + YKQV++GDP++K TLLGPLHT ASK NF GIQ
Sbjct: 577 QRCTSCRRLILHEKIYQHIIEQLTDAYKQVKLGDPVDKDTLLGPLHTRASKLNFENGIQV 756
Query: 722 IKSQGGKILFGGSAIESEGNFVQPTIVE 805
IKS GG+IL GGS IE EGNFVQPTIVE
Sbjct: 757 IKSHGGRILTGGSVIEHEGNFVQPTIVE 840
Score = 388 bits (842), Expect = e-107
Identities = 179/267 (67%), Positives = 195/267 (73%)
Frame = -2 / -3
Query: 804 STIVGCTKFPSDSMADPPKRIFPP*DLIV*MPFKKFSFEAGVCSGPSKVPFSNGSPIRTC 625
STIVGCTKFPS S+ +PP R+ PP*D I *MPF KFSF+A VCSGP+ V S GSP TC
Sbjct: 839 STIVGCTKFPSCSITEPPVRMRPP*DFIT*MPFSKFSFDARVCSGPNSVSLSTGSPNLTC 660
Query: 624 LYTSTS*SRKV*YMFS*RISLRHVVQRCPAVPTAANKTDRTASWISASSITMMALFPLSS 445
LY S + S Y+FS ISLR +V RCPAVPTAANKTDRT SASSIT+MALFPLSS
Sbjct: 659 LYASVNCSIMCWYIFSWSISLRQLVHRCPAVPTAANKTDRTTIAKSASSITIMALFPLSS 480
Query: 444 RRHLPNLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNTL 265
+H PNLALT *TI P VLPV ET GIL S AIA PIS PPQ VK+APGK F SNT
Sbjct: 479 SKHFPNLALTAF*TICPTFVLPVKETNGILPSSAIACPISAPPQMQVKMAPGKPFLSNTS 300
Query: 264 ATXXXXXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIW 85
A APFQTTQ PQTKAM AF PSTA GKLNAVITPT PRGF TSIII
Sbjct: 299 AMSFVVAIVINGVVGAPFQTTQLPQTKAMHAFHPSTAHGKLNAVITPTIPRGFQTSIII* 120
Query: 84 FGRSDGIMDPFSWRLSPTA*SHMSMIS 4
GRS+G+M+PF+ RL PTA*SHMS+ S
Sbjct: 119 LGRSEGMMEPFNCRLKPTA*SHMSINS 39
Score = 238 bits (514), Expect = 8e-062
Identities = 109/267 (40%), Positives = 169/267 (63%)
Frame = -1 / -2
Query: 805 FHNCWLHKVSF*FNGRSSKKDFPSLRFDSLNAFQKVLF*SRSVQWSQ*GAFLQRIPNSDL 626
FHNC LHK+ F R+++++ P++RF +LNA KV * S+QWS F+ R+ +L
Sbjct: 840 FHNCRLHKIPFMLYNRATRQNAPTMRFYNLNAVLKVQL*CTSMQWS*QRIFINRVSQFNL 661
Query: 625 FVYLNKLIKEGLIYVLMKNQPTTCSAALSCCTNSSEQDRSHS*LDICIIHNNDGIVSAKF 446
+ +++L+ L+Y+L++ QP+ A+LS TN S+Q+RSH+ +CI HN +GIVS KF
Sbjct: 660 LICISQLLNNVLVYLLVEYQPSATGASLSSSTNCSKQNRSHNHC*VCIFHNYNGIVSTKF 481
Query: 445 KKAFTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRCKNCAWQVVLLQYT 266
K+ KSC + LLN+ ++ SS+ +Q ++ L N T +N Q + L +
Sbjct: 480 KQTLPKSCIDCLLNNLSNLRASSKRDQWDSSIFSYRLPNLCTTTDAGENGTRQTISL*HL 301
Query: 265 SHYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNTHNSKGIPHLHHHM 86
+ FC SDQW STFP++TI+T+QS+A IP K+ST +++C + +K IP+LHHHM
Sbjct: 300 GYEFCCRYSDQWCSRSTFPNNTIATNQSDACIPPKYSTWKVECSNYSDYTKRIPNLHHHM 121
Query: 85 VWSFRWYNGSI*LAT*PHSIITHVDDF 5
+ F Y+G+I L+T* + II HV+ F
Sbjct: 120 IGPF*RYDGAIQLST*ANRIIAHVNKF 40
Score = 205 bits (443), Expect(3) = 6e-059
Identities = 84/191 (43%), Positives = 115/191 (60%)
Frame = +1 / +3
Query: 16 HV*LCCGAKSPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLW 195
HV LC KS +W+H+T T + YDDGG+ES W I +CC W+EC+H FGLW
Sbjct: 51 HVRLCGWLKSTVEWLHHTFRTAQSYDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLW 230
Query: 196 KLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFI 375
+LC LERCS + DHY ++K + E+ A +F++ LW +W+ + + G
Sbjct: 231 QLCCLERCSYYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLF 410
Query: 376 HWKYKGWSNGSATS*CKIW*MPS*T*RKQCHHCYG*CRYPASCAICLVRCCWYSRTTLHY 555
+WK++GW+N S S CKIW + +*T* KQCH+ YG CR CAIC V C WY TT+H
Sbjct: 411 YWKHEGWTNCSKGSQCKIWEVFA*T*WKQCHYSYGRCRLSNGCAICFVCCSWYCWTTMHQ 590
Query: 556 MS*ADSS*EHI 588
+ AD+ E I
Sbjct: 591 LPKADTPREDI 623
Score = 80.8 bits (170), Expect(3) = 3e-027
Identities = 53/122 (43%), Positives = 58/122 (47%)
Frame = -3 / -1
Query: 731 EI**SECXXXXXXXKQECAVVPVRCLSPTDPQFGLVCIPQQADQGRFDICSHEESAYDM* 552
EI * EC E AVV L L + Q Q I S SA+
Sbjct: 766 EIL*LECRSQSSALMHEYAVVLTAYLYQQGLPI*LAYMHQSTAQ*CVGISSRGVSAFGNW 587
Query: 551 CSVVLLYQQQRTRQIAQLAGYLHHP*Q*WHCFR*VQEGIYQILH*LVAEPLDQPLYFQ*M 372
C VV YQ Q+T+QIAQ LH P* *WHCF *VQ QILH*L E QP FQ*
Sbjct: 586 CIVVQQYQLQQTKQIAQPLLSLHLP*L*WHCFH*VQANTSQILH*LPFEQFVQPSCFQ*K 407
Query: 371 KP 366
+P
Sbjct: 406 RP 401
Score = 46.4 bits (95), Expect(3) = 3e-027
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -3 / -1
Query: 116 QGDSTPPSSYGLVVQMV*WIHLVGDLAPQHNHTCR* 9
Q DS PPSSY V V*W H DL+ HN TC+*
Sbjct: 151 QEDSKPPSSYDWAVLKV*WSHSTVDLSQPHNRTCQ* 44
Score = 39.6 bits (80), Expect(3) = 6e-059
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 655 RHLTGTTAHSCFKRELFERHSDYQIS 732
R+ TTA+SC K EL ERHS Y+IS
Sbjct: 690 RYAVRTTAYSCIKAEL*ERHSSYKIS 767
Score = 39.6 bits (80), Expect(3) = 3e-027
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3 / -1
Query: 209 RRHNFHRPKQCKHSNQAQHKGN*M 138
++HN H+PK+C HS Q QH +*M
Sbjct: 244 KQHNCHKPKRCMHSTQVQHMES*M 173
Score = 22.6 bits (43), Expect(3) = 6e-059
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 775 RKLCATNNCG 804
R+ CAT NCG
Sbjct: 810 REFCATYNCG 839
>gb|DR684764.1|DR684764 EST1074841 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAW40 3' end, mRNA sequence
Length = 823
Score = 530 bits (1152), Expect = e-150
Identities = 217/265 (81%), Positives = 238/265 (89%)
Frame = +2 / +2
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 29 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 208
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RI
Sbjct: 209 ALVCGNCVVWKGAPTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRI 388
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAG 541
PLVSFTGST+ G +VQ+ V+ARFGKCLLELSGNNAIIVM+DAD+ + VRSVLFAAVGTAG
Sbjct: 389 PLVSFTGSTKVGQIVQKAVNARFGKCLLELSGNNAIIVMEDADLAMVVRSVLFAAVGTAG 568
Query: 542 QRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQT 721
QRCT+CRRLILHE IYQ ++QL + YKQV++GDP++K TLLGPLHT ASK NF KGIQ
Sbjct: 569 QRCTSCRRLILHEKIYQHIIEQLTDAYKQVKLGDPVDKDTLLGPLHTRASKLNFEKGIQV 748
Query: 722 IKSQGGKILFGGSAIESEGNFVQPT 796
IKSQGG+IL GGS IE EGNFVQPT
Sbjct: 749 IKSQGGRILTGGSVIEHEGNFVQPT 823
Score = 382 bits (829), Expect = e-105
Identities = 176/264 (66%), Positives = 192/264 (72%)
Frame = -2 / -2
Query: 795 VGCTKFPSDSMADPPKRIFPP*DLIV*MPFKKFSFEAGVCSGPSKVPFSNGSPIRTCLYT 616
VGCTKFPS S+ +PP R+ PP*D I *MPF KFSF+A VCSGP+ V S GSP TCLY
Sbjct: 822 VGCTKFPSCSITEPPVRMRPP*DFIT*MPFSKFSFDARVCSGPNSVSLSTGSPNLTCLYA 643
Query: 615 STS*SRKV*YMFS*RISLRHVVQRCPAVPTAANKTDRTASWISASSITMMALFPLSSRRH 436
S + S Y+FS ISLR +V RCPAVPTAANKTDRT SASSIT+MALFPLSS +H
Sbjct: 642 SVNCSIMCWYIFSWSISLRQLVHRCPAVPTAANKTDRTTIAKSASSITIMALFPLSSSKH 463
Query: 435 LPNLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNTLATX 256
PNLALT *TI P VLPV ET GIL S AIA PIS PPQ VK+APGK F SNT A
Sbjct: 462 FPNLALTAF*TICPTFVLPVKETNGILPSSAIACPISAPPQMQVKMAPGKPFLSNTSAMS 283
Query: 255 XXXXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGR 76
APFQTTQ PQTKAM AF PSTA GKLNAVITPT PRGF TSIII GR
Sbjct: 282 FVVAIVINGVVGAPFQTTQLPQTKAMHAFHPSTAHGKLNAVITPTIPRGFQTSIII*LGR 103
Query: 75 SDGIMDPFSWRLSPTA*SHMSMIS 4
S+G+M+PF+ RL PTA*SHMS+ S
Sbjct: 102 SEGMMEPFNCRLKPTA*SHMSINS 31
Score = 228 bits (492), Expect = 8e-059
Identities = 107/264 (40%), Positives = 165/264 (62%)
Frame = -1 / -1
Query: 796 CWLHKVSF*FNGRSSKKDFPSLRFDSLNAFQKVLF*SRSVQWSQ*GAFLQRIPNSDLFVY 617
C LHK+ F R++ ++ P+LRF +LNA KV * S+QWS F+ R+ +L +
Sbjct: 823 CRLHKIPFMLYNRATCQNAPTLRFYNLNALLKVQL*CTSMQWS*QRIFINRVSQFNLLIC 644
Query: 616 LNKLIKEGLIYVLMKNQPTTCSAALSCCTNSSEQDRSHS*LDICIIHNNDGIVSAKFKKA 437
+++L+ L+Y+L++ QP+ A+LS TN S+Q+RSH+ +CI HN +GIVS KFK+
Sbjct: 643 ISQLLNNVLVYLLVEYQPSATGASLSSSTNCSKQNRSHNHC*VCIFHNYNGIVSTKFKQT 464
Query: 436 FTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRCKNCAWQVVLLQYTSHY 257
KSC + LLN+ ++ SS+ +Q ++ L N T +N Q + L + +
Sbjct: 463 LPKSCIDCLLNNLSNLRASSKRDQWDSSIFSYRLPNLCTTTDAGENGTRQTISL*HLGYE 284
Query: 256 FCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNTHNSKGIPHLHHHMVWS 77
FC SDQW STFP++TI+T+QS+A IP K+ST +++C + +K IP+LHHHM+
Sbjct: 283 FCCRYSDQWCSRSTFPNNTIATNQSDACIPPKYSTWKVECSNYSDYTKRIPNLHHHMIGP 104
Query: 76 FRWYNGSI*LAT*PHSIITHVDDF 5
F Y+G+I L+T* + II HV+ F
Sbjct: 103 F*RYDGAIQLST*ANRIIAHVNKF 32
Score = 205 bits (443), Expect(2) = 1e-057
Identities = 84/191 (43%), Positives = 115/191 (60%)
Frame = +1 / +1
Query: 16 HV*LCCGAKSPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLW 195
HV LC KS +W+H+T T + YDDGG+ES W I +CC W+EC+H FGLW
Sbjct: 43 HVRLCGWLKSTVEWLHHTFRTAQSYDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLW 222
Query: 196 KLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFI 375
+LC LERCS + DHY ++K + E+ A +F++ LW +W+ + + G
Sbjct: 223 QLCCLERCSYYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLF 402
Query: 376 HWKYKGWSNGSATS*CKIW*MPS*T*RKQCHHCYG*CRYPASCAICLVRCCWYSRTTLHY 555
+WK++GW+N S S CKIW + +*T* KQCH+ YG CR CAIC V C WY TT+H
Sbjct: 403 YWKHEGWTNCSKGSQCKIWEVFA*T*WKQCHYSYGRCRLSNGCAICFVCCSWYCWTTMHQ 582
Query: 556 MS*ADSS*EHI 588
+ AD+ E I
Sbjct: 583 LPKADTPREDI 615
Score = 83.5 bits (176), Expect(3) = 4e-028
Identities = 54/123 (43%), Positives = 59/123 (47%)
Frame = -3 / -3
Query: 734 PEI**SECXXXXXXXKQECAVVPVRCLSPTDPQFGLVCIPQQADQGRFDICSHEESAYDM 555
PEI * EC E AVV L L + Q Q I S SA+
Sbjct: 761 PEIL*LECPSQSSALMHEYAVVLTAYLYQQGLPI*LAYMHQSTAQ*CVGISSRGVSAFGN 582
Query: 554 *CSVVLLYQQQRTRQIAQLAGYLHHP*Q*WHCFR*VQEGIYQILH*LVAEPLDQPLYFQ* 375
C VV YQ Q+T+QIAQ LH P* *WHCF *VQ QILH*L E QP FQ*
Sbjct: 581 WCIVVQQYQLQQTKQIAQPLLSLHLP*L*WHCFH*VQANTSQILH*LPFEQFVQPSCFQ* 402
Query: 374 MKP 366
+P
Sbjct: 401 KRP 393
Score = 46.4 bits (95), Expect(3) = 4e-028
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 116 QGDSTPPSSYGLVVQMV*WIHLVGDLAPQHNHTCR* 9
Q DS PPSSY V V*W H DL+ HN TC+*
Sbjct: 143 QEDSKPPSSYDWAVLKV*WSHSTVDLSQPHNRTCQ* 36
Score = 39.6 bits (80), Expect(3) = 4e-028
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 209 RRHNFHRPKQCKHSNQAQHKGN*M 138
++HN H+PK+C HS Q QH +*M
Sbjct: 236 KQHNCHKPKRCMHSTQVQHMES*M 165
Score = 39.1 bits (79), Expect(2) = 1e-057
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 655 RHLTGTTAHSCFKRELFERHSDYQISG 735
R+ TTA+SC K EL E HS Y+ISG
Sbjct: 682 RYAVRTTAYSCIKAEL*EGHSSYKISG 762
>gb|DR167749.1|DR167749 RTPHOS1_20_F10.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_20_F10_A029 5', mRNA sequence
Length = 614
Score = 387 bits (839), Expect(2) = e-107
Identities = 155/194 (79%), Positives = 175/194 (90%)
Frame = +2 / +1
Query: 83 NHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKIV 262
+HMMMEVWNPLG+VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA TK++
Sbjct: 31 HHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIATTKLI 210
Query: 263 ASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCL 442
A VLE+N LPGAIFT CGG EIGQAIA D RIPLVSFTGST+ G +VQ+ V+ARFGKCL
Sbjct: 211 AEVLERNGLPGAIFTCICGGAEIGQAIAEDGRIPLVSFTGSTKVGQIVQKAVNARFGKCL 390
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LELSGNNAIIVM+DAD+ + VRSVLFAAVGTAGQRCT+CRRLILHE IYQ ++QL + Y
Sbjct: 391 LELSGNNAIIVMEDADLAMVVRSVLFAAVGTAGQRCTSCRRLILHEKIYQHIIEQLTDAY 570
Query: 623 KQVRIGDPLEKGTL 664
KQV++GDP++K TL
Sbjct: 571 KQVKLGDPVDKDTL 612
Score = 267 bits (577), Expect = 2e-070
Identities = 127/193 (65%), Positives = 134/193 (69%)
Frame = -2 / -1
Query: 666 SKVPFSNGSPIRTCLYTSTS*SRKV*YMFS*RISLRHVVQRCPAVPTAANKTDRTASWIS 487
+ V S GSP TCLY S + S Y+FS ISLR +V RCPAVPTAANKTDRT S
Sbjct: 614 NSVSLSTGSPNLTCLYASVNCSIMCWYIFSWSISLRQLVHRCPAVPTAANKTDRTTIAKS 435
Query: 486 ASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKD 307
ASSIT+MALFPLSS +H PNLALT *TI P VLPV ET GIL S AIA PIS PPQ
Sbjct: 434 ASSITIMALFPLSSSKHFPNLALTAF*TICPTFVLPVKETNGILPSSAIACPISAPPQMQ 255
Query: 306 VKIAPGKLFFSNTLATXXXXXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLNAVIT 127
VK+APGK F SNT A APFQTTQ PQTKAM AF PSTA GKLNAVIT
Sbjct: 254 VKMAPGKPFLSNTSAMSFVVAIVINGVVGAPFQTTQLPQTKAMHAFHPSTAHGKLNAVIT 75
Query: 126 PTTPRGFHTSIII 88
PT PRGF TSIII
Sbjct: 74 PTIPRGFQTSIII 36
Score = 181 bits (390), Expect = 1e-044
Identities = 74/167 (44%), Positives = 101/167 (60%)
Frame = +1 / +3
Query: 88 YDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLWKLCRLERCSNNSTDHYCNDKNSG* 267
YDDGG+ES W I +CC W+EC+H FGLW+LC LERCS + DHY ++K
Sbjct: 36 YDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLWQLCCLERCSYYTIDHYSDNKTHSR 215
Query: 268 CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFIHWKYKGWSNGSATS*CKIW*MPS* 447
+ E+ A +F++ LW +W+ + + G +WK++GW+N S S CKIW + +*
Sbjct: 216 GVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLFYWKHEGWTNCSKGSQCKIWEVFA* 395
Query: 448 T*RKQCHHCYG*CRYPASCAICLVRCCWYSRTTLHYMS*ADSS*EHI 588
T* KQCH+ YG CR CAIC V C WY TT+H + AD+ E I
Sbjct: 396 T*WKQCHYSYGRCRLSNGCAICFVCCSWYCWTTMHQLPKADTPREDI 536
Score = 168 bits (361), Expect = 1e-040
Identities = 75/191 (39%), Positives = 120/191 (62%)
Frame = -1 / -3
Query: 655 FLQRIPNSDLFVYLNKLIKEGLIYVLMKNQPTTCSAALSCCTNSSEQDRSHS*LDICIIH 476
F+ R+ +L + +++L+ L+Y+L++ QP+ A+LS TN S+Q+RSH+ +CI H
Sbjct: 603 FINRVSQFNLLICISQLLNNVLVYLLVEYQPSATGASLSSSTNCSKQNRSHNHC*VCIFH 424
Query: 475 NNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRCKNC 296
N +GIVS KFK+ KSC + LLN+ ++ SS+ +Q ++ L N T +N
Sbjct: 423 NYNGIVSTKFKQTLPKSCIDCLLNNLSNLRASSKRDQWDSSIFSYRLPNLCTTTDAGENG 244
Query: 295 AWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNTHNS 116
Q + L + + FC SDQW STFP++TI+T+QS+A IP K+ST +++C + +
Sbjct: 243 TRQTISL*HLGYEFCCRYSDQWCSRSTFPNNTIATNQSDACIPPKYSTWKVECSNYSDYT 64
Query: 115 KGIPHLHHHMV 83
K IP+LHHHM+
Sbjct: 63 KRIPNLHHHMM 31
Score = 24.4 bits (47), Expect(2) = e-107
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 53 NGSIIPSERP 82
+GSIIPSERP
Sbjct: 2 DGSIIPSERP 31
>gb|DR102410.1|DR102410 STRR1_80_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_80_H05_A033 5', mRNA sequence
Length = 604
Score = 371 bits (805), Expect = e-102
Identities = 158/201 (78%), Positives = 177/201 (88%)
Frame = +2 / +2
Query: 314 CGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADI 493
CGG EIGQAIA D RIPLVSFTGST+ G +VQ+ V+ARFGKCLLELSGNNAIIVM+DAD+
Sbjct: 2 CGGAEIGQAIAEDGRIPLVSFTGSTKVGQIVQKAVNARFGKCLLELSGNNAIIVMEDADL 181
Query: 494 QLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGP 673
+ VRSVLFAAVGTAGQRCT+CRRLILHE IYQ ++QL + YKQV++GDP++K TLLGP
Sbjct: 182 AMVVRSVLFAAVGTAGQRCTSCRRLILHEKIYQHIIEQLTDAYKQVKLGDPVDKDTLLGP 361
Query: 674 LHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPV 853
LHT ASK NF KGIQ IKSQGG+IL GGS IE EGNFVQPTIVEI+ APVVKEELFGPV
Sbjct: 362 LHTRASKLNFEKGIQAIKSQGGRILTGGSVIEHEGNFVQPTIVEISKDAPVVKEELFGPV 541
Query: 854 LYVMKFQTLKEAIEINNSVPQ 916
LYV+KFQTL+EAIEINNSV Q
Sbjct: 542 LYVLKFQTLEEAIEINNSVAQ 604
Score = 299 bits (648), Expect = 3e-080
Identities = 142/201 (70%), Positives = 152/201 (75%)
Frame = -2 / -2
Query: 915 *GTELLISIASFKV*NFIT*RTGPKSSSFTTGAEGVISTIVGCTKFPSDSMADPPKRIFP 736
* TEL ISIAS KV*NF T*RTGPKSSSFTTGA ISTIVGCTKFPS S+ +PP R+ P
Sbjct: 603 *ATELFISIASSKV*NFKT*RTGPKSSSFTTGASLDISTIVGCTKFPSCSITEPPVRMRP 424
Query: 735 P*DLIV*MPFKKFSFEAGVCSGPSKVPFSNGSPIRTCLYTSTS*SRKV*YMFS*RISLRH 556
P*D I *MPF KFSF+A VCSGP+ V S GSP TCLY S + S Y+FS ISLR
Sbjct: 423 P*DFIA*MPFSKFSFDARVCSGPNSVSLSTGSPNLTCLYASVNCSIMCWYIFSWSISLRQ 244
Query: 555 VVQRCPAVPTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPV 376
+V RCPAVPTAANKTDRT SASSIT+MALFPLSS +H PNLALT *TI P VLPV
Sbjct: 243 LVHRCPAVPTAANKTDRTTIAKSASSITIMALFPLSSSKHFPNLALTAF*TICPTFVLPV 64
Query: 375 NETKGILMSRAIA*PISVPPQ 313
ET GIL S AIA PIS PPQ
Sbjct: 63 KETNGILPSSAIACPISAPPQ 1
Score = 184 bits (397), Expect = 1e-045
Identities = 84/201 (41%), Positives = 126/201 (62%)
Frame = -1 / -1
Query: 916 LRNRVIDFNCFLQGLKFHNIKDRTKEFFFHNWCRRCNFHNCWLHKVSF*FNGRSSKKDFP 737
L NR++ FN FLQGLK +I++R K+ F HN C FHNC LHK+ F R+++++ P
Sbjct: 604 LSNRIVYFNSFLQGLKLQDIENRPKKLFLHNRCIFRYFHNCRLHKIPFMLYNRATRQNAP 425
Query: 736 SLRFDSLNAFQKVLF*SRSVQWSQ*GAFLQRIPNSDLFVYLNKLIKEGLIYVLMKNQPTT 557
+LRF SLNA KV * S+QWS F+ R+ +L + +++L+ L+Y+L++ QP+
Sbjct: 424 TLRFYSLNALLKVQL*CTSMQWS*QRIFINRVSQFNLLICISQLLNNVLVYLLVEYQPSA 245
Query: 556 CSAALSCCTNSSEQDRSHS*LDICIIHNNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSS 377
A+LS TN S+Q+RSH+ +CI HN +GIVS KFK+ KSC + LLN+ ++ SS
Sbjct: 244 TGASLSSSTNCSKQNRSHNHC*VCIFHNYNGIVSTKFKQTLPKSCIDCLLNNLSNLRASS 65
Query: 376 E*NQRYPNVKGNCLTNFSAPT 314
+ +Q ++ L N T
Sbjct: 64 KRDQWDSSIFSYRLPNLCTTT 2
Score = 97.7 bits (207), Expect(3) = 7e-041
Identities = 41/92 (44%), Positives = 55/92 (59%)
Frame = +1 / +1
Query: 313 LWGH*NWSSNCP*H*DTFGFIHWKYKGWSNGSATS*CKIW*MPS*T*RKQCHHCYG*CRY 492
LW +W+ + + G +WK++GW+N S S CKIW + +*T* KQCH+ YG CR
Sbjct: 1 LWWCRDWAGDS*RWKNPIGLFYWKHEGWTNCSKGSQCKIWEVFA*T*WKQCHYSYGRCRL 180
Query: 493 PASCAICLVRCCWYSRTTLHYMS*ADSS*EHI 588
CAIC V C WY TT+H + AD+ E I
Sbjct: 181 SNGCAICFVCCSWYCWTTMHQLPKADTPREDI 276
Score = 83.5 bits (176), Expect(2) = 8e-023
Identities = 54/123 (43%), Positives = 59/123 (47%)
Frame = -3 / -3
Query: 734 PEI**SECXXXXXXXKQECAVVPVRCLSPTDPQFGLVCIPQQADQGRFDICSHEESAYDM 555
PEI * EC E AVV L L + Q Q I S SA+
Sbjct: 422 PEIL*LECPSQSSALMHEYAVVLTAYLYQQGLPI*LAYMHQSTAQ*CVGISSRGVSAFGN 243
Query: 554 *CSVVLLYQQQRTRQIAQLAGYLHHP*Q*WHCFR*VQEGIYQILH*LVAEPLDQPLYFQ* 375
C VV YQ Q+T+QIAQ LH P* *WHCF *VQ QILH*L E QP FQ*
Sbjct: 242 WCIVVQQYQLQQTKQIAQPLLSLHLP*L*WHCFH*VQANTSQILH*LPFEQFVQPSCFQ* 63
Query: 374 MKP 366
+P
Sbjct: 62 KRP 54
Score = 70.3 bits (147), Expect(3) = 7e-041
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +1 / +1
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSS 915
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C S
Sbjct: 463 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCS 603
Score = 44.6 bits (91), Expect(2) = 8e-023
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = -3 / -3
Query: 914 EEQSY*FQLLPSRSEIS*HKGQDQRVLLSQLVQKV*FPQLLVAQSFL 774
E+Q+ FQ LP RSE S H+ Q Q+ L SQ V FPQL VAQ+ L
Sbjct: 602 EQQNCLFQ*LPPRSETSRHREQAQKALPSQQVHL*IFPQL*VAQNSL 462
Score = 39.1 bits (79), Expect(3) = 7e-041
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1 / +1
Query: 655 RHLTGTTAHSCFKRELFERHSDYQISG 735
R+ TTA+SC K EL E HS Y+ISG
Sbjct: 343 RYAVRTTAYSCIKAEL*EGHSSYKISG 423
>gb|CO170284.1|CO170284 NDL1_13_A07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_13_A07_A029 3', mRNA sequence
Length = 767
Score = 303 bits (656), Expect(3) = 1e-099
Identities = 122/143 (85%), Positives = 131/143 (91%)
Frame = +2 / -1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 653 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 474
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RI
Sbjct: 473 ALVCGNCVVWKGAPTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRI 294
Query: 362 PLVSFTGSTRAGLMVQQQVSARF 430
PLVSFTGST+ G +VQ+ V+ARF
Sbjct: 293 PLVSFTGSTKVGQIVQKAVNARF 225
Score = 202 bits (436), Expect(3) = 4e-073
Identities = 95/142 (66%), Positives = 101/142 (71%)
Frame = -2 / +1
Query: 429 NLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNTLATXXX 250
NLALT *TI P VLPV ET GIL S AIA PIS PPQ VK+APGK F SNT A
Sbjct: 226 NLALTAF*TICPTFVLPVKETNGILPSSAIACPISAPPQMQVKMAPGKPFLSNTSAMSFV 405
Query: 249 XXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSD 70
APFQTTQ PQTKAM AF PSTA GKLNAVITPT PRGF TSIII GRS+
Sbjct: 406 VAIVINGVVGAPFQTTQLPQTKAMHAFHPSTAHGKLNAVITPTIPRGFQTSIII*LGRSE 585
Query: 69 GIMDPFSWRLSPTA*SHMSMIS 4
G+M+PF+ RL PTA*SHMS+ S
Sbjct: 586 GMMEPFNCRLKPTA*SHMSINS 651
Score = 146 bits (313), Expect(2) = 2e-036
Identities = 58/138 (42%), Positives = 83/138 (60%)
Frame = +1 / -3
Query: 16 HV*LCCGAKSPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLW 195
HV*LC KS +W+H+T T + YDDGG+ES W I +CC W+EC+H FGLW
Sbjct: 639 HV*LCGWLKSTVEWLHHTFRTAQSYDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLW 460
Query: 196 KLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFI 375
+LC LERCS + DHY ++K + E+ A +F++ LW +W+ + + G
Sbjct: 459 QLCCLERCSYYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLF 280
Query: 376 HWKYKGWSNGSATS*CKI 429
+WK++GW+N S S CKI
Sbjct: 279 YWKHEGWTNCSKGSQCKI 226
Score = 122 bits (262), Expect(2) = 3e-039
Identities = 60/146 (41%), Positives = 90/146 (61%)
Frame = -1 / +3
Query: 442 KAFTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRCKNCAWQVVLLQYTS 263
K F KSC + LLN+ ++ SS+ +Q ++ L N T +N Q + L +
Sbjct: 213 KHFPKSCIDCLLNNLSNLRASSKRDQWDSSIFSYRLPNLCTTTDAGENGTRQTISL*HLG 392
Query: 262 HYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNTHNSKGIPHLHHHMV 83
+ FC SDQW STFP++TI+T+QS+A IP K+ST +++C + +K IP+LHHHM+
Sbjct: 393 YEFCCRYSDQWCSRSTFPNNTIATNQSDACIPPKYSTWKVECSNYSDYTKRIPNLHHHMI 572
Query: 82 WSFRWYNGSI*LAT*PHSIITHVDDF 5
F Y+G+I L+T* + IITHV+ F
Sbjct: 573 GPF*RYDGAIQLST*ANRIITHVNKF 650
Score = 114 bits (243), Expect(2) = 2e-028
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +2 / -2
Query: 389 RAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRL 568
R + ++Q FGKCLLELSGNNAIIVM+DAD+ + VRSVLFAAVGTAGQRCT+CRRL
Sbjct: 265 RLDKLFKRQSMQDFGKCLLELSGNNAIIVMEDADLAMVVRSVLFAAVGTAGQRCTSCRRL 86
Query: 569 ILHENIYQTFL 601
ILHE T L
Sbjct: 85 ILHEKNTNTLL 53
Score = 89.0 bits (188), Expect(3) = 4e-073
Identities = 39/57 (68%), Positives = 43/57 (75%)
Frame = -2 / +3
Query: 582 FS*RISLRHVVQRCPAVPTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTC 412
FS ISLR +V RCPAVPTAANKTDRT SASSIT+MALFPLSS +H P + C
Sbjct: 72 FSWSISLRQLVHRCPAVPTAANKTDRTTIAKSASSITIMALFPLSSSKHFPKSCIDC 242
Score = 65.2 bits (136), Expect(3) = 1e-099
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1 / -1
Query: 424 KIW*MPS*T*RKQCHHCYG*CRYPASCAICLVRCCWYSRTTLHYMS*ADSS*EHISNL 597
+ W + +*T* KQCH+ YG CR CAIC V C WY TT+H + AD+ E ++
Sbjct: 230 RFWEVFA*T*WKQCHYSYGRCRLSNGCAICFVCCSWYCWTTMHQLPKADTPREEYQHI 57
Score = 60.6 bits (126), Expect(2) = 3e-039
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = -1 / +2
Query: 583 VLMKNQPTTCSAALSCCTNSSEQDRSHS*LDICIIHNNDGIVSAKFKKAFTK 428
+L++ QP+ A+LS TN S+Q+RSH+ +CI HN +GIVS KFK+ K
Sbjct: 71 LLVEYQPSATGASLSSSTNCSKQNRSHNHC*VCIFHNYNGIVSTKFKQTLPK 226
Score = 52.4 bits (108), Expect(4) = 7e-022
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -3 / +1
Query: 569 SAYDM*CSVVLLYQQQRTRQIAQLAGYLHHP*Q*WHCFR*VQEGIYQIL 423
SA+ C VV YQ Q+T+QIAQ LH P* *WHCF *VQ Q L
Sbjct: 85 SAFGNWCIVVQQYQLQQTKQIAQPLLSLHLP*L*WHCFH*VQANTSQNL 231
Score = 50.1 bits (103), Expect(4) = 7e-022
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -3 / +2
Query: 116 QGDSTPPSSYGLVVQMV*WIHLVGDLAPQHNHTCR* 9
Q DS PPSSY V V*W H DL+ HNHTC+*
Sbjct: 539 QEDSKPPSSYDWAVLKV*WSHSTVDLSQPHNHTCQ* 646
Score = 39.6 bits (80), Expect(4) = 7e-022
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 209 RRHNFHRPKQCKHSNQAQHKGN*M 138
++HN H+PK+C HS Q QH +*M
Sbjct: 446 KQHNCHKPKRCMHSTQVQHMES*M 517
Score = 35.9 bits (72), Expect(3) = 1e-099
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2 / -1
Query: 587 YQTFLDQLVEVYKQVRIGDPLE 652
YQ ++QL + YKQV++GDP++
Sbjct: 68 YQHIIEQLTDAYKQVKLGDPVD 3
Score = 35.9 bits (72), Expect(2) = 2e-028
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +3 / -2
Query: 15 TCVIMLWG*VAN*MDPLYHLNDQTI**WRCGIPL 116
TCVIM *V +*M P Y N I**WR GI L
Sbjct: 640 TCVIMRLA*VDS*MAPSYLQNGPII**WRFGILL 539
Score = 27.6 bits (54), Expect(2) = 2e-036
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3 / -3
Query: 444 LNLAETMPSLLWMMQ 488
LNL ETMP LW MQ
Sbjct: 210 LNLVETMPL*LWKMQ 166
Score = 24.4 bits (47), Expect(4) = 7e-022
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3 / +2
Query: 431 QILH*LVAEPLDQPLYFQ*MKP 366
+ILH*L E QP FQ* +P
Sbjct: 224 KILH*LPFEQFVQPSCFQ*KRP 289
Score = 24.0 bits (46), Expect(3) = 4e-073
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / +1
Query: 651 SNGSPIRTCLYTSTS 607
S GSP TCLY S +
Sbjct: 4 STGSPNLTCLYASVN 48
>gb|CF663545.1|CF663545 RTCNT1_3_C03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_3_C03_A029 5', mRNA sequence
Length = 654
Score = 318 bits (689), Expect(2) = 1e-086
Identities = 128/149 (85%), Positives = 137/149 (91%)
Frame = +2 / +1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 169 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 348
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RI
Sbjct: 349 ALVCGNCVVWKGAPTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRI 528
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLE 448
PLVSFTGST+ G +VQ+ V+ARFGKCLLE
Sbjct: 529 PLVSFTGSTKVGQIVQKAVNARFGKCLLE 615
Score = 211 bits (456), Expect(2) = 1e-055
Identities = 98/148 (66%), Positives = 105/148 (70%)
Frame = -2 / -2
Query: 447 SRRHLPNLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNT 268
S +H PNLALT *TI P VLPV ET GIL S AIA PIS PPQ VK+APGK F SNT
Sbjct: 614 SSKHFPNLALTAF*TICPTFVLPVKETNGILPSSAIACPISAPPQMQVKMAPGKPFLSNT 435
Query: 267 LATXXXXXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIII 88
A APFQTTQ PQTKAM AF PSTA GKLNAVITPT PRGF TSIII
Sbjct: 434 SAMSFVVAIVINGVVGAPFQTTQLPQTKAMHAFHPSTAHGKLNAVITPTIPRGFQTSIII 255
Query: 87 WFGRSDGIMDPFSWRLSPTA*SHMSMIS 4
GRS+G+M+PF+ RL PTA*SHMS+ S
Sbjct: 254 *LGRSEGMMEPFNCRLKPTA*SHMSINS 171
Score = 151 bits (324), Expect = 1e-035
Identities = 59/139 (42%), Positives = 84/139 (60%)
Frame = +1 / +3
Query: 16 HV*LCCGAKSPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLW 195
HV*LC KS +W+H+T T + YDDGG+ES W I +CC W+EC+H FGLW
Sbjct: 183 HV*LCGWLKSTVEWLHHTFRTAQSYDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLW 362
Query: 196 KLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFI 375
+LC LERCS + DHY ++K + E+ A +F++ LW +W+ + + G
Sbjct: 363 QLCCLERCSYYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLF 542
Query: 376 HWKYKGWSNGSATS*CKIW 432
+WK++GW+N S S CKIW
Sbjct: 543 YWKHEGWTNCSKGSQCKIW 599
Score = 124 bits (265), Expect(2) = 6e-029
Identities = 60/148 (40%), Positives = 91/148 (61%)
Frame = -1 / -1
Query: 448 FKKAFTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRCKNCAWQVVLLQY 269
FK+ KSC + LLN+ ++ SS+ +Q ++ L N T +N Q + L +
Sbjct: 615 FKQTLPKSCIDCLLNNLSNLRASSKRDQWDSSIFSYRLPNLCTTTDAGENGTRQTISL*H 436
Query: 268 TSHYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNTHNSKGIPHLHHH 89
+ FC SDQW STFP++TI+T+QS+A IP K+ST +++C + +K IP+LHHH
Sbjct: 435 LGYEFCCRYSDQWCSRSTFPNNTIATNQSDACIPPKYSTWKVECSNYSDYTKRIPNLHHH 256
Query: 88 MVWSFRWYNGSI*LAT*PHSIITHVDDF 5
M+ F Y+G+I L+T* + IITHV+ F
Sbjct: 255 MIGPF*RYDGAIQLST*ANRIITHVNKF 172
Score = 26.3 bits (51), Expect(2) = 1e-055
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 485 HHP*Q*WHCFR*V 447
H P* *WHCF *V
Sbjct: 653 HLP*L*WHCFH*V 615
Score = 24.4 bits (47), Expect(2) = 6e-029
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 484 IIHNNDGIVSAKFK 443
I HN +GIVS KF+
Sbjct: 652 IFHNYNGIVSTKFQ 611
Score = 23.5 bits (45), Expect(2) = 1e-086
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 447 NLAETMPSLLWMM 485
NL ETMP LW M
Sbjct: 615 NLVETMPL*LWKM 653
>gb|CO158311.1|CO158311 FLD1_6_C12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_C12_A029 3', mRNA sequence
Length = 717
Score = 320 bits (693), Expect = 2e-086
Identities = 129/226 (57%), Positives = 162/226 (71%)
Frame = +2 / +3
Query: 497 LAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPL 676
+A RS+LFA VGTAG RCTT RRL++HE +Y +++L YK VRIGDPL++ T+ GP+
Sbjct: 6 MAARSILFACVGTAGXRCTTGRRLVVHEKVYDELMEKLKTAYKSVRIGDPLDESTICGPV 185
Query: 677 HTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVL 856
HT ++ F +G+ I+SQGGKI+ GG+ I EGNFV+PTIVEI+ SAP VKEELF PVL
Sbjct: 186 HTKSAVREFSEGLAKIQSQGGKIIVGGNVISREGNFVEPTIVEISHSAPCVKEELFLPVL 365
Query: 857 YVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIX 1036
Y +K + +EA+E+NN VPQGLSS++FT +F W GP GSDCG+ NVN T+GAEI
Sbjct: 366 YAIKVSSFEEALEVNNEVPQGLSSALFTNDMKKVFTWTGPLGSDCGLANVNTGTSGAEIG 545
Query: 1037 XXXXXXXXXXXXXXXXSDSWKQYMRRATCTINYGSELPLAQGINFG 1174
SDSWKQYMRR TCTINY ELPLAQG++FG
Sbjct: 546 GAFGGEKETGGGRESGSDSWKQYMRRTTCTINYSKELPLAQGLDFG 683
Score = 155 bits (334), Expect(2) = 3e-043
Identities = 89/178 (50%), Positives = 98/178 (55%)
Frame = -2 / -3
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLV +FTF PQSLP GP H+ FV NP*GT L S AS K+ I +
Sbjct: 541 ISAPLVPVFTFANPQSLPKGPVHVNTFFISFVKRAEDNP*GTSLFTSNASSKLDTLIAYK 362
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSMADPPKRIFPP*DLIV*MPFKKFSFEAGVCS 673
TG SSS T GAE ISTIVG TK PS + PP IFPP D I+ P + V +
Sbjct: 361 TGKNSSSLTHGAECDISTIVGSTKLPSREITFPPTMIFPPWDWILARPSENSRTADLV*T 182
Query: 672 GPSKVPFSNGSPIRTCLYTSTS*SRKV*YMFS*RISLRHVVQRCPAVPTAANKTDRTA 499
GP V S GSPIRT LY S S Y FS* R VV PAVPT AN+ D A
Sbjct: 181 GPQMVDSSKGSPIRTLLYAVLSFSMSSSYTFS*TTRRRPVVHL*PAVPTHANRMDLAA 8
Score = 40.9 bits (83), Expect(2) = 3e-043
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2 / -3
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQES 1087
PK P A+G+S * IVQV LL+YCFQ S
Sbjct: 682 PKSRPCAKGNSFE*FIVQVVLLIYCFQLS 596
>gb|DR385753.1|DR385753 RTHG1_10_D07.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_10_D07_A029 5', mRNA sequence
Length = 821
Score = 308 bits (667), Expect = 6e-083
Identities = 131/172 (76%), Positives = 141/172 (81%)
Frame = +2 / +1
Query: 659 TLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTIVEITPSAPVVKEE 838
+LLGPLHT ASK NF KGIQ IKSQGG IL GGS IE EGNFVQPTIVEI+ APVVKEE
Sbjct: 1 SLLGPLHTRASKLNFEKGIQVIKSQGGCILTGGSVIEHEGNFVQPTIVEISKDAPVVKEE 180
Query: 839 LFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPT 1018
LFGPVLYV+KFQTL+EAIEINNSV QGLSSSIFT+ P+ IFKW+GP GSDCGIVN+NIPT
Sbjct: 181 LFGPVLYVLKFQTLEEAIEINNSVAQGLSSSIFTRSPEAIFKWIGPCGSDCGIVNINIPT 360
Query: 1019 NGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRATCTINYGSELPLAQGINFG 1174
+GAEI SDSWKQYMRRATCT+NYGSELPLAQGINFG
Sbjct: 361 SGAEIGGAFGGEKATGGGREAGSDSWKQYMRRATCTLNYGSELPLAQGINFG 516
Score = 207 bits (447), Expect(2) = 3e-062
Identities = 94/123 (76%), Positives = 101/123 (82%)
Frame = -2 / -1
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 374 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 195
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSMADPPKRIFPP*DLIV*MPFKKFSFEAGVCS 673
TGPKSSSFTTGA ISTIVGCTKFPS S+ +PP R+ PP*D I *MPF KFSF+A VCS
Sbjct: 194 TGPKSSSFTTGASLDISTIVGCTKFPSCSITEPPVRMHPP*DFIT*MPFSKFSFDARVCS 15
Query: 672 GPS 664
GP+
Sbjct: 14 GPN 6
Score = 126 bits (270), Expect(2) = 2e-031
Identities = 53/117 (45%), Positives = 76/117 (64%)
Frame = -1 / -3
Query: 1018 SRYVHIHYTTITTMGPEPLKNNIWPLCKYRTAQSLRNRVIDFNCFLQGLKFHNIKDRTKE 839
S Y++++ TT+TT PLKN+ W + T +L NR++ FN FLQGLK +I++R K+
Sbjct: 360 SWYIYVYNTTVTTTRSNPLKNSFWTPSEDGTT*ALSNRIVYFNSFLQGLKLQDIENRPKK 181
Query: 838 FFFHNWCRRCNFHNCWLHKVSF*FNGRSSKKDFPSLRFDSLNAFQKVLF*SRSVQWS 668
F HN C FHNC LHK+ F R+++++ P+LRF +LNA KV * S+QWS
Sbjct: 180 LFLHNRCIFRYFHNCRLHKIPFMLYNRATRQNAPTLRFYNLNALLKVQL*CTSMQWS 10
Score = 102 bits (217), Expect(3) = 2e-031
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +1 / +3
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSSRIEQFYIYKEARY 954
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C SR + F+++ E+R
Sbjct: 117 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCSRPK*FHLHSESRS 296
Query: 955 YF*VARAPW**LWYSECEHT 1014
YF*V W**LWY + ++T
Sbjct: 297 YF*VDWTLW**LWYCKHKYT 356
Score = 52.8 bits (109), Expect(2) = 3e-062
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -1
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 515 PKLIPCASGSSLP*LSVQVARRMYCFHESL 426
Score = 37.3 bits (75), Expect(3) = 2e-031
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 670 TTAHSCFKRELFERHSDYQISG 735
TTA+SC K EL E HS Y+ISG
Sbjct: 12 TTAYSCIKAEL*EGHSSYKISG 77
Score = 35.4 bits (71), Expect(3) = 2e-031
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 1084 E*FLEAVHEEGDLYNQLWERATSSPGNQFWLI 1179
+*F+E VH +LY QL ER +S + FW++
Sbjct: 426 K*FMETVHASCNLYTQLRERTATSTRD*FWIL 521
Score = 30.4 bits (60), Expect(2) = 2e-031
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 1174 TKIDSLG*R*LAPIVDCTSRPPHVLLP 1094
+KI+ L * AP+++CTS HVL P
Sbjct: 516 SKINPLC*WQFAPVIECTSCTTHVLFP 436
>gb|DR012570.1|DR012570 HEAT1_13_E05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_E05_A029 5', mRNA sequence
Length = 627
Score = 290 bits (628), Expect = 1e-077
Identities = 116/132 (87%), Positives = 122/132 (92%)
Frame = +2 / +3
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 228 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 407
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA TK++A VLE+N LPGAIFT CGG EIGQAIA D RI
Sbjct: 408 ALVCGNCVVWKGAPTTPLITIATTKLIAEVLERNGLPGAIFTCICGGAEIGQAIAEDGRI 587
Query: 362 PLVSFTGSTRAG 397
PLVSFTGST+ G
Sbjct: 588 PLVSFTGSTKVG 623
Score = 189 bits (408), Expect = 3e-047
Identities = 87/131 (66%), Positives = 93/131 (70%)
Frame = -2 / -3
Query: 396 PALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNTLATXXXXXXXXXXXXXA 217
P VLPV ET GIL S AIA PIS PPQ VK+APGK F SNT A A
Sbjct: 622 PTFVLPVKETNGILPSSAIACPISAPPQMQVKMAPGKPFLSNTSAMSFVVAIVINGVVGA 443
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLS 37
PFQTTQ PQTKAM AF PSTA GKLNAVITPT PRGF TSIII GRS+G+M+PF+ RL
Sbjct: 442 PFQTTQLPQTKAMHAFHPSTAHGKLNAVITPTIPRGFQTSIII*LGRSEGMMEPFNCRLK 263
Query: 36 PTA*SHMSMIS 4
PTA*SHMS+ S
Sbjct: 262 PTA*SHMSINS 230
Score = 135 bits (290), Expect = 6e-031
Identities = 52/127 (40%), Positives = 76/127 (59%)
Frame = +1 / +2
Query: 16 HV*LCCGAKSPTKWIHYTI*TTKPYDDGGVESPWSCGCYNGI*FPLCCAWLECLHCFGLW 195
HV*LC KS +W+H+T T + YDDGG+ES W I +CC W+EC+H FGLW
Sbjct: 242 HV*LCGWLKSTVEWLHHTFRTAQSYDDGGLESSWYSRSNYCIQLSMCCTWVECMHRFGLW 421
Query: 196 KLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*NWSSNCP*H*DTFGFI 375
+LC LERCS + DHY ++K + E+ A +F++ LW +W+ + + G
Sbjct: 422 QLCCLERCSYYTIDHYSDNKTHSRGVREKWFAWCHFHLHLWWCRDWAGDS*RWKNPIGLF 601
Query: 376 HWKYKGW 396
+WK++GW
Sbjct: 602 YWKHEGW 622
Score = 108 bits (230), Expect = 1e-022
Identities = 49/111 (44%), Positives = 71/111 (63%)
Frame = -1 / -2
Query: 337 LTNFSAPTKRCKNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKH 158
L N T +N Q + L + + FC SDQW STFP++TI+T+QS+A IP K+
Sbjct: 563 LPNLCTTTDAGENGTRQTISL*HLGYEFCCRYSDQWCSRSTFPNNTIATNQSDACIPPKY 384
Query: 157 STREIKCRYNTHNSKGIPHLHHHMVWSFRWYNGSI*LAT*PHSIITHVDDF 5
ST +++C + +K IP+LHHHM+ F Y+G+I L+T* + IITHV+ F
Sbjct: 383 STWKVECSNYSDYTKRIPNLHHHMIGPF*RYDGAIQLST*ANRIITHVNKF 231
>gb|DR386705.1|DR386705 RTHG1_17_A06.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_17_A06_A029 3', mRNA sequence
Length = 823
Score = 264 bits (572), Expect = 8e-070
Identities = 110/146 (75%), Positives = 120/146 (82%)
Frame = +2 / +2
Query: 737 GKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQ 916
G+IL GGS IE EGNFVQPTIVEI+ APVVKEELFGPVLYV+KFQTL+EAIEINNSV Q
Sbjct: 2 GRILTGGSVIEHEGNFVQPTIVEISKDAPVVKEELFGPVLYVLKFQTLEEAIEINNSVAQ 181
Query: 917 GLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSW 1096
GLSSSIFT+ P+ IFKW+GP GSDCGIVN+NIPT+GAEI SDSW
Sbjct: 182 GLSSSIFTRSPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSW 361
Query: 1097 KQYMRRATCTINYGSELPLAQGINFG 1174
KQYMRRATCT+NYGSELPLAQGINFG
Sbjct: 362 KQYMRRATCTLNYGSELPLAQGINFG 439
Score = 164 bits (352), Expect(2) = 3e-049
Identities = 76/99 (76%), Positives = 81/99 (81%)
Frame = -2 / -2
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 297 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 118
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSMADPPKRIFP 736
TGPKSSSFTTGA ISTIVGCTKFPS S+ +PP R+ P
Sbjct: 117 TGPKSSSFTTGASLDISTIVGCTKFPSCSITEPPVRMRP 1
Score = 102 bits (217), Expect(2) = 1e-025
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +1 / +1
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSSRIEQFYIYKEARY 954
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C SR + F+++ E+R
Sbjct: 40 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCSRPK*FHLHSESRS 219
Query: 955 YF*VARAPW**LWYSECEHT 1014
YF*V W**LWY + ++T
Sbjct: 220 YF*VDWTLW**LWYCKHKYT 279
Score = 100 bits (213), Expect(2) = 1e-023
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = -1 / -1
Query: 1018 SRYVHIHYTTITTMGPEPLKNNIWPLCKYRTAQSLRNRVIDFNCFLQGLKFHNIKDRTKE 839
S Y++++ TT+TT PLKN+ W + T +L NR++ FN FLQGLK +I++R K+
Sbjct: 283 SWYIYVYNTTVTTTRSNPLKNSFWTPSEDGTT*ALSNRIVYFNSFLQGLKLQDIENRPKK 104
Query: 838 FFFHNWCRRCNFHNCWLHKVSF*FNGRSSKKDFP 737
F HN C FHNC LHK+ F R+++++ P
Sbjct: 103 LFLHNRCIFRYFHNCRLHKIPFMLYNRATRQNAP 2
Score = 52.8 bits (109), Expect(2) = 3e-049
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 438 PKLIPCASGSSLP*LSVQVARRMYCFHESL 349
Score = 35.4 bits (71), Expect(2) = 1e-025
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +1
Query: 1084 E*FLEAVHEEGDLYNQLWERATSSPGNQFWLI 1179
+*F+E VH +LY QL ER +S + FW++
Sbjct: 349 K*FMETVHASCNLYTQLRERTATSTRD*FWIL 444
Score = 30.4 bits (60), Expect(2) = 1e-023
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 1174 TKIDSLG*R*LAPIVDCTSRPPHVLLP 1094
+KI+ L * AP+++CTS HVL P
Sbjct: 439 SKINPLC*WQFAPVIECTSCTTHVLFP 359
>gb|DR745849.1|DR745849 RTCU1_33_B06.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_33_B06_A029 3', mRNA sequence
Length = 622
Score = 255 bits (552), Expect = 4e-067
Identities = 106/140 (75%), Positives = 115/140 (82%)
Frame = +2 / -2
Query: 755 GSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSI 934
GS IE EGNFVQPTIVEI+ APVVKEELFGPVLYV+KFQTL+EAIEINNSV QGLSSSI
Sbjct: 621 GSVIEHEGNFVQPTIVEISKDAPVVKEELFGPVLYVLKFQTLEEAIEINNSVAQGLSSSI 442
Query: 935 FTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRR 1114
FT+ P+ IFKW+GP GSDCGIVN+NIPT+GAEI SDSWKQYMRR
Sbjct: 441 FTRSPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 262
Query: 1115 ATCTINYGSELPLAQGINFG 1174
ATCT+NYGSELPLAQGINFG
Sbjct: 261 ATCTLNYGSELPLAQGINFG 202
Score = 157 bits (337), Expect(2) = 3e-047
Identities = 73/93 (78%), Positives = 77/93 (82%)
Frame = -2 / +2
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 344 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 523
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSMADP 754
TGPKSSSFTTGA ISTIVGCTKFPS S+ +P
Sbjct: 524 TGPKSSSFTTGASLDISTIVGCTKFPSCSITEP 622
Score = 102 bits (217), Expect(2) = 1e-025
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +1 / -1
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSSRIEQFYIYKEARY 954
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C SR + F+++ E+R
Sbjct: 601 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCSRPK*FHLHSESRS 422
Query: 955 YF*VARAPW**LWYSECEHT 1014
YF*V W**LWY + ++T
Sbjct: 421 YF*VDWTLW**LWYCKHKYT 362
Score = 95.9 bits (203), Expect(2) = 3e-022
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = -1 / +1
Query: 1018 SRYVHIHYTTITTMGPEPLKNNIWPLCKYRTAQSLRNRVIDFNCFLQGLKFHNIKDRTKE 839
S Y++++ TT+TT PLKN+ W + T +L NR++ FN FLQGLK +I++R K+
Sbjct: 358 SWYIYVYNTTVTTTRSNPLKNSFWTPSEDGTT*ALSNRIVYFNSFLQGLKLQDIENRPKK 537
Query: 838 FFFHNWCRRCNFHNCWLHKVSF 773
F HN C FHNC LHK+ F
Sbjct: 538 LFLHNRCIFRYFHNCRLHKIPF 603
Score = 52.8 bits (109), Expect(2) = 3e-047
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / +2
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 203 PKLIPCASGSSLP*LSVQVARRMYCFHESL 292
Score = 35.4 bits (71), Expect(2) = 1e-025
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / -1
Query: 1084 E*FLEAVHEEGDLYNQLWERATSSPGNQFWLI 1179
+*F+E VH +LY QL ER +S + FW++
Sbjct: 292 K*FMETVHASCNLYTQLRERTATSTRD*FWIL 197
Score = 30.4 bits (60), Expect(2) = 3e-022
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / +1
Query: 1174 TKIDSLG*R*LAPIVDCTSRPPHVLLP 1094
+KI+ L * AP+++CTS HVL P
Sbjct: 202 SKINPLC*WQFAPVIECTSCTTHVLFP 282
>gb|CO167298.1|CO167298 FLD1_68_C08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_C08_A029 3', mRNA sequence
Length = 832
Score = 251 bits (542), Expect = 1e-065
Identities = 104/137 (75%), Positives = 113/137 (82%)
Frame = +2 / +1
Query: 764 IESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
IE EGNFVQPTIVEI+ APVVKEELFGPVLYV+KFQTL+EAIEINNSV QGLSSSIFT+
Sbjct: 4 IEHEGNFVQPTIVEISKDAPVVKEELFGPVLYVLKFQTLEEAIEINNSVAQGLSSSIFTR 183
Query: 944 RPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRATC 1123
P+ IFKW+GP GSDCGIVN+NIPT+GAEI SDSWKQYMRRATC
Sbjct: 184 SPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSWKQYMRRATC 363
Query: 1124 TINYGSELPLAQGINFG 1174
T+NYGSELPLAQGINFG
Sbjct: 364 TLNYGSELPLAQGINFG 414
Score = 153 bits (328), Expect(2) = 5e-046
Identities = 72/90 (80%), Positives = 75/90 (83%)
Frame = -2 / -3
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 272 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 93
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSM 763
TGPKSSSFTTGA ISTIVGCTKFPS S+
Sbjct: 92 TGPKSSSFTTGASLDISTIVGCTKFPSCSI 3
Score = 102 bits (217), Expect(2) = 1e-025
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +1 / +3
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSSRIEQFYIYKEARY 954
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C SR + F+++ E+R
Sbjct: 15 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCSRPK*FHLHSESRS 194
Query: 955 YF*VARAPW**LWYSECEHT 1014
YF*V W**LWY + ++T
Sbjct: 195 YF*VDWTLW**LWYCKHKYT 254
Score = 95.9 bits (203), Expect(2) = 3e-022
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = -1 / -2
Query: 1018 SRYVHIHYTTITTMGPEPLKNNIWPLCKYRTAQSLRNRVIDFNCFLQGLKFHNIKDRTKE 839
S Y++++ TT+TT PLKN+ W + T +L NR++ FN FLQGLK +I++R K+
Sbjct: 258 SWYIYVYNTTVTTTRSNPLKNSFWTPSEDGTT*ALSNRIVYFNSFLQGLKLQDIENRPKK 79
Query: 838 FFFHNWCRRCNFHNCWLHKVSF 773
F HN C FHNC LHK+ F
Sbjct: 78 LFLHNRCIFRYFHNCRLHKIPF 13
Score = 52.8 bits (109), Expect(2) = 5e-046
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -3
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 413 PKLIPCASGSSLP*LSVQVARRMYCFHESL 324
Score = 35.4 bits (71), Expect(2) = 1e-025
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 1084 E*FLEAVHEEGDLYNQLWERATSSPGNQFWLI 1179
+*F+E VH +LY QL ER +S + FW++
Sbjct: 324 K*FMETVHASCNLYTQLRERTATSTRD*FWIL 419
Score = 30.4 bits (60), Expect(2) = 3e-022
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 1174 TKIDSLG*R*LAPIVDCTSRPPHVLLP 1094
+KI+ L * AP+++CTS HVL P
Sbjct: 414 SKINPLC*WQFAPVIECTSCTTHVLFP 334
>gb|DR385000.1|DR385000 RTHG1_6_B04.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_6_B04_A029 3', mRNA sequence
Length = 797
Score = 251 bits (542), Expect = 1e-065
Identities = 104/137 (75%), Positives = 113/137 (82%)
Frame = +2 / +1
Query: 764 IESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
IE EGNFVQPTIVEI+ APVVKEELFGPVLYV+KFQTL+EAIEINNSV QGLSSSIFT+
Sbjct: 4 IEHEGNFVQPTIVEISKDAPVVKEELFGPVLYVLKFQTLEEAIEINNSVAQGLSSSIFTR 183
Query: 944 RPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRATC 1123
P+ IFKW+GP GSDCGIVN+NIPT+GAEI SDSWKQYMRRATC
Sbjct: 184 SPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSWKQYMRRATC 363
Query: 1124 TINYGSELPLAQGINFG 1174
T+NYGSELPLAQGINFG
Sbjct: 364 TLNYGSELPLAQGINFG 414
Score = 153 bits (328), Expect(2) = 5e-046
Identities = 72/90 (80%), Positives = 75/90 (83%)
Frame = -2 / -1
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 272 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 93
Query: 852 TGPKSSSFTTGAEGVISTIVGCTKFPSDSM 763
TGPKSSSFTTGA ISTIVGCTKFPS S+
Sbjct: 92 TGPKSSSFTTGASLDISTIVGCTKFPSCSI 3
Score = 102 bits (217), Expect(2) = 1e-025
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +1 / +3
Query: 775 RKLCATNNCGNYTFCTSCERRTLWSCPLCYEISDLEGSN*NQ*LCSSRIEQFYIYKEARY 954
R+ CAT NCGN CT CE R W+C LC E+SDL GS *N+ C SR + F+++ E+R
Sbjct: 15 REFCATYNCGNI*RCTCCEGRAFWACSLCLEVSDLGGSY*NKQFCCSRPK*FHLHSESRS 194
Query: 955 YF*VARAPW**LWYSECEHT 1014
YF*V W**LWY + ++T
Sbjct: 195 YF*VDWTLW**LWYCKHKYT 254
Score = 95.9 bits (203), Expect(2) = 3e-022
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = -1 / -3
Query: 1018 SRYVHIHYTTITTMGPEPLKNNIWPLCKYRTAQSLRNRVIDFNCFLQGLKFHNIKDRTKE 839
S Y++++ TT+TT PLKN+ W + T +L NR++ FN FLQGLK +I++R K+
Sbjct: 258 SWYIYVYNTTVTTTRSNPLKNSFWTPSEDGTT*ALSNRIVYFNSFLQGLKLQDIENRPKK 79
Query: 838 FFFHNWCRRCNFHNCWLHKVSF 773
F HN C FHNC LHK+ F
Sbjct: 78 LFLHNRCIFRYFHNCRLHKIPF 13
Score = 52.8 bits (109), Expect(2) = 5e-046
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -1
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 413 PKLIPCASGSSLP*LSVQVARRMYCFHESL 324
Score = 35.4 bits (71), Expect(2) = 1e-025
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1 / +3
Query: 1084 E*FLEAVHEEGDLYNQLWERATSSPGNQFWLI 1179
+*F+E VH +LY QL ER +S + FW++
Sbjct: 324 K*FMETVHASCNLYTQLRERTATSTRD*FWIL 419
Score = 30.4 bits (60), Expect(2) = 3e-022
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 1174 TKIDSLG*R*LAPIVDCTSRPPHVLLP 1094
+KI+ L * AP+++CTS HVL P
Sbjct: 414 SKINPLC*WQFAPVIECTSCTTHVLFP 334
>gb|DR385676.1|DR385676 RTHG1_10_D07.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_10_D07_A029 3', mRNA sequence
Length = 793
Score = 219 bits (473), Expect = 4e-056
Identities = 90/119 (75%), Positives = 98/119 (82%)
Frame = +2 / +1
Query: 818 APVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDIIFKWLGPHGSDCGI 997
APVVKEELFGPVLYV+KFQTL+EAIEINNSV QGLSSSIFT+ P+ IFKW+GP GSDCGI
Sbjct: 7 APVVKEELFGPVLYVLKFQTLEEAIEINNSVAQGLSSSIFTRSPEAIFKWIGPCGSDCGI 186
Query: 998 VNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRATCTINYGSELPLAQGINFG 1174
VN+NIPT+GAEI SDSWKQYMRRATCT+NYGSELPLAQGINFG
Sbjct: 187 VNINIPTSGAEIGGAFGGEKATGGGREAGSDSWKQYMRRATCTLNYGSELPLAQGINFG 363
Score = 126 bits (270), Expect(2) = 5e-038
Identities = 59/72 (81%), Positives = 61/72 (84%)
Frame = -2 / -3
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NFIT*R 853
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF T*R
Sbjct: 221 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NFKT*R 42
Query: 852 TGPKSSSFTTGA 817
TGPKSSSFTTGA
Sbjct: 41 TGPKSSSFTTGA 6
Score = 52.8 bits (109), Expect(2) = 5e-038
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -3
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 362 PKLIPCASGSSLP*LSVQVARRMYCFHESL 273
>gb|CO158389.1|CO158389 FLD1_6_C12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_C12_A029 5', mRNA sequence
Length = 822
Score = 185 bits (398), Expect(2) = 6e-054
Identities = 70/106 (66%), Positives = 86/106 (81%)
Frame = +2 / +3
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+E ID+CDYA GLSR NG I+PSERP H++ E W+PLG++GVITAFNFP AV GWN I
Sbjct: 369 QEYIDVCDYATGLSRTFNGLILPSERPGHVIQENWHPLGMIGVITAFNFPLAVCGWNTAI 548
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCG 319
+LVCGN +WKGA TT L+T+A+T++VASVLE NNLPG IFT+ G
Sbjct: 549 SLVCGNVQIWKGASTTSLVTVALTRLVASVLEANNLPGGIFTTISG 686
Score = 105 bits (224), Expect = 8e-022
Identities = 54/105 (51%), Positives = 57/105 (54%)
Frame = -2 / -3
Query: 318 PQKDVKIAPGKLFFSNTLATXXXXXXXXXXXXXAPFQTTQFPQTKAMQAFQPSTAQGKLN 139
P+ VKI PGKLF S T AT APFQ PQTK M FQP TA+GKL
Sbjct: 685 PEIVVKIPPGKLFASKTEATSLVNATVTNDVVDAPFQICTLPQTKEMAVFQPQTARGKLK 506
Query: 138 AVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLSPTA*SHMSMIS 4
AVITP PRG S I W G S+G M P R P A*S SM S
Sbjct: 505 AVITPIMPRGCQFS*ITWPGLSEGRMRPLKVRERPVA*SQTSMYS 371
Score = 47.3 bits (97), Expect(2) = 6e-054
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2 / +3
Query: 293 GAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLEL 451
G T G IG+ + D R+ L+SFTGST G + V RFG+ +LEL
Sbjct: 663 GIFTTISGSGGVIGEFLIQDNRLSLISFTGSTEIGRRISSVVHGRFGRTILEL 821
>gb|DR102334.1|DR102334 STRR1_80_H05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_80_H05_A033 3', mRNA sequence
Length = 728
Score = 183 bits (395), Expect = 2e-045
Identities = 75/103 (72%), Positives = 82/103 (79%)
Frame = +2 / +3
Query: 866 KFQTLKEAIEINNSVPQGLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXX 1045
KFQTL+EAIEINNSV QGLSSSIFT+ P+ IFKW+GP GSDCGIVN+NIPT+GAEI
Sbjct: 3 KFQTLEEAIEINNSVAQGLSSSIFTRSPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAF 182
Query: 1046 XXXXXXXXXXXXXSDSWKQYMRRATCTINYGSELPLAQGINFG 1174
SDSWKQYMRRATCT+NYGSELPLAQGINFG
Sbjct: 183 GGEKATGGGREAGSDSWKQYMRRATCTLNYGSELPLAQGINFG 311
Score = 95.0 bits (201), Expect(2) = 1e-028
Identities = 44/56 (78%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTELLISIASFKV*NF 865
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL ISIAS KV*NF
Sbjct: 169 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLRVKMELLRP*ATELFISIASSKV*NF 2
Score = 52.8 bits (109), Expect(2) = 1e-028
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 310 PKLIPCASGSSLP*LSVQVARRMYCFHESL 221
>gb|DR069137.1|DR069137 RTDK1_5_D09.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_D09_A029 3', mRNA sequence
Length = 666
Score = 161 bits (347), Expect = 8e-039
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = +2 / +1
Query: 896 INNSVPQGLSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXX 1075
INNSV QGLSSSIFT P+ IFKW+GP GSDCGIVN+NIPT+GAEI
Sbjct: 1 INNSVAQGLSSSIFTGSPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGR 180
Query: 1076 XXXSDSWKQYMRRATCTINYGSELPLAQGINFG 1174
SDSWKQYMRRATCT+NYGSELPLAQGINFG
Sbjct: 181 EAGSDSWKQYMRRATCTLNYGSELPLAQGINFG 279
Score = 76.2 bits (160), Expect(2) = 5e-023
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = -2 / -2
Query: 1032 ISAPLVGMFTFTIPQSLPWGPSHLKIISGLFVNIELLNP*GTEL 901
ISAPLVG+F FTIPQSLP GP HLKI SGL V +ELL P* TEL
Sbjct: 137 ISAPLVGIFMFTIPQSLPQGPIHLKIASGLPVKMELLRP*ATEL 6
Score = 52.8 bits (109), Expect(2) = 5e-023
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 1173 PKLIPWARGSSLP*LIVQVALLMYCFQESL 1084
PKLIP A GSSLP*L VQVA MYCF ESL
Sbjct: 278 PKLIPCASGSSLP*LSVQVARRMYCFHESL 189
>gb|DR069213.1|DR069213 RTDK1_5_D09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_D09_A029 5', mRNA sequence
Length = 665
Score = 149 bits (321), Expect = 3e-035
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = +2 / +3
Query: 920 LSSSIFTKRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWK 1099
LSSSIFT+ P++IFKW+GP GSDCGIVN+NIPT+GAEI SDSWK
Sbjct: 3 LSSSIFTRSPEVIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSWK 182
Query: 1100 QYMRRATCTINYGSELPLAQGINFG 1174
QYMRRATCT+NYGSELPLAQGINFG
Sbjct: 183 QYMRRATCTLNYGSELPLAQGINFG 257
>gb|DR078088.1|DR078088 RTFEPL1_1_G10.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_G10_A029 5', mRNA sequence
Length = 785
Score = 98.7 bits (209), Expect(3) = 2e-033
Identities = 47/134 (35%), Positives = 68/134 (50%)
Frame = +2 / +3
Query: 398 LMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILH 577
L+++ + LEL G + +IVMDDAD+ AV A GQ C RL +
Sbjct: 201 LIMEAAAKSNLKPVTLELGGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQ 380
Query: 578 ENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGG 757
E IY FL + V K+ +GDP + G GP E L+ IQ K G +LFGG
Sbjct: 381 EGIYDDFLKKAVARAKKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGG 560
Query: 758 SAIESEGNFVQPTI 799
+++ +G +++PTI
Sbjct: 561 NSLGDKGFYIEPTI 602
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 609 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 749
Score = 31.3 bits (62), Expect(3) = 2e-033
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQ 412
PG + G G AI+ + I VSFTGST+ G ++ +
Sbjct: 90 PGVLNVLSGFGETAGAAISSHMDIDKVSFTGSTQVGRLIME 212
>gb|DR744318.1|DR744318 RTCU1_21_E04.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_21_E04_A029 5', mRNA sequence
Length = 721
Score = 116 bits (247), Expect(2) = 4e-033
Identities = 52/171 (30%), Positives = 85/171 (49%)
Frame = +2 / +3
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAI 469
PG + EIG + ++ ++FTGST G + + + LEL GN
Sbjct: 177 PGVLNIVMGNAAEIGDTLLESSQVRKITFTGSTAVGKKLMAAAAGTVKRVSLELGGNAPC 356
Query: 470 IVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPL 649
I+ DDAD+++AV+ L A GQ C R+++ + IY+ F + +++G+ L
Sbjct: 357 IIFDDADLEVAVKGTLAAKFRNTGQTCVCVNRILVQDGIYEKFASLFASAVQDMQVGNGL 536
Query: 650 EKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTIV 802
E+G + GPL A+ + K IQ S+G K+L GG F +PT++
Sbjct: 537 EEGVIQGPLINNAAVQKVEKHIQDAVSKGAKLLVGGKRHSLGYTFYEPTVL 689
Score = 46.9 bits (96), Expect(2) = 4e-033
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2 / +3
Query: 110 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKI 259
P+GVVG IT +NFP A++ AL G VV K A TPL +A ++
Sbjct: 6 PVGVVGAITPWNFPLAMITRKVAPALASGCTVVVKPAELTPLTALAAAEL 155
>gb|DR092906.1|DR092906 STRR1_4_G04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_G04_A033 5', mRNA sequence
Length = 890
Score = 74.4 bits (156), Expect(4) = 6e-033
Identities = 38/119 (31%), Positives = 56/119 (47%)
Frame = +2 / +2
Query: 398 LMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILH 577
L+++ + LEL G + +I+MDDA++ AV A GQ C R+ +
Sbjct: 314 LIMEASAKSNLKPVTLELGGKSPLIIMDDANVDEAVNLAHLAVYVNMGQVCCAGSRVFVQ 493
Query: 578 ENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFG 754
E IY FL + V KQ +GDP + G GP E L+ I+ K +G +L G
Sbjct: 494 EGIYDEFLKKAVARAKQQVVGDPFKPGVHQGPQIDKVQYEKVLEYIEYGKREGANLLTG 670
Score = 51.5 bits (106), Expect(4) = 6e-033
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2 / +3
Query: 824 VVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDI 955
+ +EE+FGPV+ ++KF+T++E IE N GLS+ I TK ++
Sbjct: 681 IAQEEIFGPVMSILKFKTIEEVIERGNKTIYGLSAGIVTKNINV 812
Score = 42.8 bits (87), Expect(4) = 6e-033
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2 / +2
Query: 110 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 244
P+GVVG I +N+P + AL CG +V K A TPL+ +
Sbjct: 32 PIGVVGQIIPWNYPLTMFVLKISPALACGCTIVIKSAEQTPLVAL 166
Score = 29.0 bits (57), Expect(4) = 6e-033
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2 / +2
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQ 412
PG + G G AI+ + I ++FTGST G ++ +
Sbjct: 203 PGVLNVLSGFGETAGAAISSHMDIDKIAFTGSTEVGRLIME 325
>gb|CO163346.1|CO163346 FLD1_41_B05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_B05_A029 3', mRNA sequence
Length = 865
Score = 88.1 bits (186), Expect(4) = 6e-033
Identities = 42/119 (35%), Positives = 65/119 (54%)
Frame = +2 / -2
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE
Sbjct: 546 LELGGKSPLIIMDDADIEEAVNLAHTAIFFNSGQVCCAGSRIYVQEGIHDKFVKRVVERA 367
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GG+ + +G +++PTI
Sbjct: 366 KKQVVGDPFNPEVEHGPQIDKTQFEKILEYIEHGKREGAKLLTGGNRVGEKGFYIEPTI 190
Score = 52.8 bits (109), Expect(4) = 6e-033
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / -2
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 156 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTV 28
Score = 28.6 bits (56), Expect(4) = 6e-033
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1 / -1
Query: 148 PLCCAWLECLHCFGLWKLCRLERCSNNSTD 237
P C + E L FGLW + C NS++
Sbjct: 835 PTCHVFYENLSSFGLWMHYSYQTCRTNSSN 746
Score = 28.1 bits (55), Expect(4) = 6e-033
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2 / -2
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMV 406
PG + G G AI+ + I V+FTGST G +V
Sbjct: 702 PGVLNVITGFGETAGAAISSHMDIDKVAFTGSTEIGRIV 586
>gb|DR177472.1|DR177472 RTMNUT1_5_B10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_B10_A029 5', mRNA sequence
Length = 803
Score = 86.3 bits (182), Expect(4) = 2e-032
Identities = 42/119 (35%), Positives = 65/119 (54%)
Frame = +2 / +2
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A GQ C R+ + E I+ F+ ++VE
Sbjct: 266 LELGGKSPLIIMDDADIEEAVNLAHTAIFYNMGQVCFAGSRVYVQEGIHDKFVKRVVERA 445
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP + GP E L+ I+ K +G K+L GG+ + +G +++PTI
Sbjct: 446 KKQVVGDPFKLEVDHGPQIDKTQFEKILEYIEHGKREGAKLLTGGNRVGEQGFYIEPTI 622
Score = 57.0 bits (118), Expect(4) = 2e-032
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +2 / +2
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ V KF++++EAIE+ N GL++ I TK DI+
Sbjct: 656 KEEIFGPVMSVFKFRSIEEAIELGNKTIYGLAAGIMTKNIDIV 784
Score = 28.6 bits (56), Expect(4) = 2e-032
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2 / +2
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMV 406
PG + G G AI+ + I V+FTGST G +V
Sbjct: 110 PGVLNVITGFGVTAGAAISSHMDIDKVAFTGSTEIGRIV 226
Score = 24.0 bits (46), Expect(4) = 2e-032
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2 / +2
Query: 182 ALVCGNCVVWKGAPTTPLITI 244
AL CG VV K A TPL +
Sbjct: 11 ALACGCTVVIKPAEQTPLTAL 73
>gb|DR011778.1|DR011778 HEAT1_7_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_G09_A029 5', mRNA sequence
Length = 862
Score = 99.1 bits (210), Expect(3) = 1e-031
Identities = 47/134 (35%), Positives = 69/134 (51%)
Frame = +2 / +2
Query: 398 LMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILH 577
L+++ + LEL+G + +IVMDDAD+ AV A GQ C RL +
Sbjct: 71 LIMEAAAKSNLKPVTLELAGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQ 250
Query: 578 ENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGG 757
E IY FL + V K+ +GDP + G GP E L+ IQ K G +LFGG
Sbjct: 251 EGIYDDFLKKAVARAKKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGG 430
Query: 758 SAIESEGNFVQPTI 799
+++ +G +++PTI
Sbjct: 431 NSLGDKGFYIEPTI 472
Score = 51.9 bits (107), Expect(3) = 1e-031
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +2
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 479 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 619
Score = 24.4 bits (47), Expect(3) = 1e-031
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 359 IPLVSFTGSTRAGLMVQQ 412
I VSFTGST+ G ++ +
Sbjct: 29 IDKVSFTGSTQVGRLIME 82
>gb|DR021932.1|DR021932 STRS1_47_G01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_47_G01_A034 5', mRNA sequence
Length = 703
Score = 133 bits (286), Expect = 2e-030
Identities = 52/78 (66%), Positives = 58/78 (74%)
Frame = +2 / -3
Query: 941 KRPDIIFKWLGPHGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYMRRAT 1120
+ P+ IFKW+GP GSDCGIVN+NIPT+GAEI SDSWKQYMRRAT
Sbjct: 701 RSPEAIFKWIGPCGSDCGIVNINIPTSGAEIGGAFGGEKATGGGREAGSDSWKQYMRRAT 522
Query: 1121 CTINYGSELPLAQGINFG 1174
CT+NYGSELPLAQGINFG
Sbjct: 521 CTLNYGSELPLAQGINFG 468
>gb|DT634175.1|DT634175 EST1149106 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG312 3' end, mRNA sequence
Length = 912
Score = 133 bits (285), Expect = 3e-030
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +2 / +3
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLG 166
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLG+VGVITAFNFPCAVLG
Sbjct: 555 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLG 719
>gb|CO197545.1|CO197545 GEO1_7_F05.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_7_F05_A029 3', mRNA sequence
Length = 705
Score = 132 bits (283), Expect = 6e-030
Identities = 54/155 (34%), Positives = 87/155 (56%)
Frame = +2 / +2
Query: 479 DDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKG 658
DD D+ + + V GQ C +R ++ E+IY F+++ VE K V++GDP +K
Sbjct: 5 DDVDLDEIMPECVRGRVSNCGQCCVASKRYLVMESIYDKFVEKYVECMKNVKVGDPFDKN 184
Query: 659 TLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTIVEITPSAPVVKEE 838
T +GP+ ++ K + +G K+L GG S+GNF PT++E +P+ +E
Sbjct: 185 TDMGPMARADLRDTVAKQVNQAVQEGAKLLLGGKVPSSKGNFYPPTVLECSPNNSACTDE 364
Query: 839 LFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
+FGPV ++K + KEAIEI N+ GL +F+K
Sbjct: 365 IFGPVASIIKVRDEKEAIEIANNSRYGLGGGVFSK 469
>gb|DR050418.1|DR050418 RTBOR1_23_H04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H04_A029 3', mRNA sequence
Length = 867
Score = 99.1 bits (210), Expect(2) = 1e-029
Identities = 47/134 (35%), Positives = 69/134 (51%)
Frame = +2 / +3
Query: 398 LMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILH 577
L+++ + LEL+G + +IVMDDAD+ AV A GQ C RL +
Sbjct: 24 LIMEAAAKSNLKPVTLELAGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQ 203
Query: 578 ENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGG 757
E IY FL + V K+ +GDP + G GP E L+ IQ K G +LFGG
Sbjct: 204 EGIYDDFLKKAVARAKKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGG 383
Query: 758 SAIESEGNFVQPTI 799
+++ +G +++PTI
Sbjct: 384 NSLGDKGFYIEPTI 425
Score = 51.9 bits (107), Expect(2) = 1e-029
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 432 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 572
>gb|CO200457.1|CO200457 GEO2_7_C07.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C07_A032 5', mRNA sequence
Length = 806
Score = 87.7 bits (185), Expect(3) = 3e-029
Identities = 43/119 (36%), Positives = 65/119 (54%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE
Sbjct: 181 LELGGKSPLIIMDDADIEEAVNLAHKAIFFGSGQVCCAGSRIYVQEGIHDKFVKRVVERA 360
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GGS + +G +++PTI
Sbjct: 361 KKQVVGDPFNPEVDHGPQIDKTQFEKILEYIEHGKREGAKLLTGGSRVGEKGFYIEPTI 537
Score = 53.3 bits (110), Expect(3) = 3e-029
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 571 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIASKNIDTV 699
Score = 26.7 bits (52), Expect(3) = 3e-029
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMV 406
PG + G G AI+ + I V+FTGST G ++
Sbjct: 25 PGVLNVITGFGETAGAAISKHMDIDKVAFTGSTDIGRVI 141
>gb|DR050731.1|DR050731 RTBOR1_25_G12.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_G12_A029 3', mRNA sequence
Length = 826
Score = 97.7 bits (207), Expect(2) = 3e-029
Identities = 46/119 (38%), Positives = 63/119 (52%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +IVMDDAD+ AV A GQ C RL + E IY FL + V
Sbjct: 13 LELGGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARA 192
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP + G GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 193 KKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 369
Score = 51.9 bits (107), Expect(2) = 3e-029
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 376 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 516
>gb|CF395276.1|CF395276 RTDS2_10_G06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_10_G06_A021 5', mRNA sequence
Length = 799
Score = 97.7 bits (207), Expect(2) = 3e-029
Identities = 46/119 (38%), Positives = 63/119 (52%)
Frame = +2 / -2
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +IVMDDAD+ AV A GQ C RL + E IY FL + V
Sbjct: 759 LELGGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARA 580
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP + G GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 579 KKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 403
Score = 51.9 bits (107), Expect(2) = 3e-029
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / -2
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 396 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 256
>gb|CO196946.1|CO196946 GEO1_2_F12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_F12_A029 5', mRNA sequence
Length = 773
Score = 97.7 bits (207), Expect(2) = 3e-029
Identities = 46/119 (38%), Positives = 63/119 (52%)
Frame = +2 / -1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +IVMDDAD+ AV A GQ C RL + E IY FL + V
Sbjct: 746 LELGGKSPVIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARA 567
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP + G GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 566 KKHVVGDPFQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 390
Score = 51.9 bits (107), Expect(2) = 3e-029
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / -1
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 383 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 243
>gb|DR117730.1|DR117730 RTMG1_8_G01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_8_G01_A029 5', mRNA sequence
Length = 862
Score = 100 bits (213), Expect(2) = 5e-029
Identities = 48/139 (34%), Positives = 72/139 (51%)
Frame = +2 / +3
Query: 341 IALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLF 520
IA+ + V+FTGST G + + LEL G + I+V +D DI+ A +F
Sbjct: 12 IAIHPDVD*VAFTGSTGTGRAIMTAAAQVIKPVSLELGGKSPILVFEDVDIEKAAEWAMF 191
Query: 521 AAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKEN 700
T GQ C+ RL++ E+I F+ +LV K ++I DP EKG LGP+ + + +
Sbjct: 192 GCFWTNGQICSATSRLLVQESIADEFIGKLVNWTKSIKISDPFEKGCRLGPVVSESQYKK 371
Query: 701 FLKGIQTIKSQGGKILFGG 757
L I + +G IL GG
Sbjct: 372 ILNFISVAEEEGATILCGG 428
Score = 48.7 bits (100), Expect(2) = 5e-029
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 806 ITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDI 955
+ PS + +EE+FGPVL VM F+T +EAI + N L+ ++ + D+
Sbjct: 486 VNPSMQIWREEVFGPVLAVMTFKTEEEAINLANDSQYALAGAVLSNNADL 635
>gb|CF393010.1|CF393010 RTDR3_18_E06.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_18_E06_A022 5', mRNA
sequence
Length = 722
Score = 85.4 bits (180), Expect(3) = 9e-028
Identities = 42/119 (35%), Positives = 64/119 (53%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +G C R+ + E I+ FL ++VE
Sbjct: 223 LELGGKSPLIIMDDADIEEAVNLAHTAIFFNSG*VCCAGSRIYVQEGIHDKFLKRVVERA 402
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GG+ + +G +++PTI
Sbjct: 403 KKQVVGDPFNPEVEHGPQIDKTQFEKILEYIEHGKREGAKLLTGGNRVGEKGFYIEPTI 579
Score = 49.2 bits (101), Expect(3) = 9e-028
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2 / +1
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSI 934
KEE+FGPV+ + KF+T++EAIE+ N GL++ I
Sbjct: 613 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGI 717
Score = 28.1 bits (55), Expect(3) = 9e-028
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMV 406
PG + G G AI+ + I V+FTGST G +V
Sbjct: 67 PGVLNVITGFGETAGAAISSHMDIDKVAFTGSTEIGRIV 183
>gb|DR386197.1|DR386197 RTHG1_13_C02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_C02_A029 5', mRNA sequence
Length = 709
Score = 102 bits (217), Expect(2) = 1e-027
Identities = 49/146 (33%), Positives = 73/146 (50%)
Frame = +2 / +1
Query: 320 GTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQL 499
G E G + + V+FTGST G + + LEL G + I+V +D DI+
Sbjct: 232 GPEAGAPLPSHPDVDKVAFTGSTGTGRAIMTAAAQVIKPVSLELGGKSPILVFEDVDIEK 411
Query: 500 AVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLH 679
A +F T GQ C+ RL++ E+I F+ +LV K ++I DP EKG LGP+
Sbjct: 412 AAEWAMFGCFWTNGQICSATSRLLVQESIADEFIGKLVNWTKSIKISDPFEKGCRLGPVV 591
Query: 680 TPASKENFLKGIQTIKSQGGKILFGG 757
+ + + L I + +G IL GG
Sbjct: 592 SESQYKKILNFISVAEEEGATILCGG 669
Score = 41.8 bits (85), Expect(2) = 1e-027
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2 / +1
Query: 110 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKIVASV 271
PLGVVG+IT +N+P + W AL G + K + L + + I +
Sbjct: 31 PLGVVGLITPWNYPLLMAAWKVAPALAAGCTAILKPSEIASLTCLELASICKEI 192
>gb|DR014263.1|DR014263 HEAT1_24_A02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_24_A02_A029 5', mRNA sequence
Length = 925
Score = 89.0 bits (188), Expect(2) = 7e-027
Identities = 43/119 (36%), Positives = 65/119 (54%)
Frame = +2 / +2
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE
Sbjct: 107 LELGGKSPLIIMDDADIEEAVNLAHTAIFFNSGQVCCAGSRIYVQEGIHDKFVKRVVERA 286
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GGS + +G +++PTI
Sbjct: 287 KKQVVGDPFNPEVDHGPQIDKTQFEKILEYIEHGKREGAKLLTGGSRVGEKGFYIEPTI 463
Score = 52.8 bits (109), Expect(2) = 7e-027
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +2
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 497 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTV 625
>gb|BX680375.1|BX680375 BX680375 RS Pinus pinaster cDNA clone RS42F02_1, mRNA sequence
Length = 616
Score = 88.1 bits (186), Expect(2) = 7e-027
Identities = 43/119 (36%), Positives = 65/119 (54%)
Frame = +2 / +3
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE
Sbjct: 27 LELGGKSPLIIMDDADIEEAVNLAHKAIFFGSGQVCCAGSRIYVQEGIHDKFVKRVVERA 206
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GGS + +G +++PTI
Sbjct: 207 KKQVVGDPFNPEVNHGPQIDKTQFEKILEYIEHGKREGAKLLTGGSRVGEKGFYIEPTI 383
Score = 53.8 bits (111), Expect(2) = 7e-027
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +3
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 417 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKNIDTV 545
>gb|DR695015.1|DR695015 EST1085108 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ49 3' end, mRNA sequence
Length = 871
Score = 89.0 bits (188), Expect(3) = 8e-027
Identities = 42/138 (30%), Positives = 67/138 (48%)
Frame = +2 / +3
Query: 344 ALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFA 523
AL + V F GST G MV + S LEL G +A IV DD D+ + + A
Sbjct: 84 ALVSSVDKVIFVGSTAVGKMVMENASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 263
Query: 524 AVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENF 703
A+ ++GQ C R +H+++Y +F Q++++ K VR+G PLE +G + +
Sbjct: 264 ALQSSGQNCAGAERFYVHQDVYDSFKAQVIKIVKSVRVGPPLEARYDMGAICLQEHADKL 443
Query: 704 LKGIQTIKSQGGKILFGG 757
+ +G +I G
Sbjct: 444 QSLVNDALEKGAEIAVRG 497
Score = 46.4 bits (95), Expect(3) = 8e-027
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2 / +3
Query: 797 IVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFT 940
I+ + S +++EE+FGP++ +MKF + +EAI + N GL ++F+
Sbjct: 558 ILNVNHSMHLMQEEIFGPIIAIMKFSSDEEAIMLANDTNYGLGCAVFS 701
Score = 24.0 bits (46), Expect(3) = 8e-027
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2 / +3
Query: 737 GKILFGGSAIESEGNFVQPTIV 802
GK+ FG + G F PT++
Sbjct: 495 GKLFFGSLGDDVVGQFYPPTVI 560
>gb|DT638958.1|DT638958 EST1153889 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHL44 3' end, mRNA sequence
Length = 840
Score = 89.0 bits (188), Expect(3) = 8e-027
Identities = 42/138 (30%), Positives = 67/138 (48%)
Frame = +2 / +2
Query: 344 ALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFA 523
AL + V F GST G MV + S LEL G +A IV DD D+ + + A
Sbjct: 92 ALVSSVDKVIFVGSTAVGKMVMENASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 271
Query: 524 AVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENF 703
A+ ++GQ C R +H+++Y +F Q++++ K VR+G PLE +G + +
Sbjct: 272 ALQSSGQNCAGAERFYVHQDVYDSFKAQVIKIVKSVRVGPPLEARYDMGAICLQEHADKL 451
Query: 704 LKGIQTIKSQGGKILFGG 757
+ +G +I G
Sbjct: 452 QSLVNDALEKGAEIAVRG 505
Score = 46.4 bits (95), Expect(3) = 8e-027
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2 / +2
Query: 797 IVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFT 940
I+ + S +++EE+FGP++ +MKF + +EAI + N GL ++F+
Sbjct: 566 ILNVNHSMHLMQEEIFGPIIAIMKFSSDEEAIMLANDTNYGLGCAVFS 709
Score = 24.0 bits (46), Expect(3) = 8e-027
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2 / +2
Query: 737 GKILFGGSAIESEGNFVQPTIV 802
GK+ FG + G F PT++
Sbjct: 503 GKLFFGSLGDDVVGQFYPPTVI 568
>gb|DR060686.1|DR060686 RTNIT1_29_H06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_H06_A029 3', mRNA sequence
Length = 782
Score = 89.0 bits (188), Expect(2) = 1e-026
Identities = 42/111 (37%), Positives = 58/111 (52%)
Frame = +2 / +1
Query: 467 IIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDP 646
+IVMDDAD+ AV A GQ C RL + E IY FL + V K+ +GDP
Sbjct: 1 VIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARAKKHVVGDP 180
Query: 647 LEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
+ G GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 181 FQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 333
Score = 51.9 bits (107), Expect(2) = 1e-026
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 340 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 480
>gb|CV032465.1|CV032465 RTNACL1_8_H04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_H04_A029 3', mRNA sequence
Length = 744
Score = 89.0 bits (188), Expect(2) = 1e-026
Identities = 42/111 (37%), Positives = 58/111 (52%)
Frame = +2 / +1
Query: 467 IIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDP 646
+IVMDDAD+ AV A GQ C RL + E IY FL + V K+ +GDP
Sbjct: 1 VIVMDDADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARAKKHVVGDP 180
Query: 647 LEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
+ G GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 181 FQPGVQHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 333
Score = 51.9 bits (107), Expect(2) = 1e-026
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 340 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 480
>gb|DR056038.1|DR056038 RTCA1_27_E03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_27_E03_A029 5', mRNA sequence
Length = 697
Score = 70.7 bits (148), Expect(3) = 1e-025
Identities = 33/120 (27%), Positives = 57/120 (47%)
Frame = +2 / +1
Query: 401 MVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHE 580
+++ ++ K LEL G + IV DDAD+ AV+ F GQ C R+ +
Sbjct: 331 VMKAAANSNLKKVTLELGGKSPNIVFDDADVDQAVKWAAFGIFFNHGQCCCAGSRVYVQS 510
Query: 581 NIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGS 760
IY F + K + +GDP ++ GP + +E + I++ K +G ++ GG+
Sbjct: 511 GIYDRFTAAFSDHIKTMNVGDPFDETVAQGPQVSQLQQERIMGYIESGKKEGATVVHGGN 690
Score = 53.8 bits (111), Expect(3) = 1e-025
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2 / +1
Query: 80 PNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKI 259
P+ + P+G VG I +NFP +L W +L CGN VV K + TPL + + +
Sbjct: 16 PDKFAYTIHEPIGAVGCIIPWNFPLLMLSWKLGPSLACGNTVVLKPSEMTPLTALRVCAL 195
Query: 260 V 262
+
Sbjct: 196 I 198
Score = 30.9 bits (61), Expect(3) = 1e-025
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2 / +1
Query: 254 KIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQ 412
++ A + E PG + G +G AIA + V+FTGST G V +
Sbjct: 181 RVCALIQEAGFPPGVVNIVTGYGNTVGAAIAEHPHLEKVAFTGSTLVGRSVMK 339
>gb|CO200378.1|CO200378 GEO2_7_C07.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C07_A032 3', mRNA sequence
Length = 767
Score = 81.7 bits (172), Expect(2) = 8e-025
Identities = 40/115 (34%), Positives = 62/115 (53%)
Frame = +2 / +3
Query: 455 GNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVR 634
G + +I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE K+
Sbjct: 3 GKSPLIIMDDADIEEAVNLAHKAIFFGSGQVCCAGSRIYVQEGIHDKFVKRVVERAKKQV 182
Query: 635 IGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
+GDP GP E L+ I+ K +G K+L GGS + +G +++PTI
Sbjct: 183 VGDPFNPEVDHGPQIDKTQFEKILEYIEHGKREGAKLLTGGSRVGEKGFYIEPTI 347
Score = 53.3 bits (110), Expect(2) = 8e-025
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +3
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 381 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIASKNIDTV 509
>gb|CF393189.1|CF393189 RTDR3_17_E11.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_E11_A022 5', mRNA
sequence
Length = 694
Score = 79.4 bits (167), Expect(2) = 8e-025
Identities = 33/118 (27%), Positives = 57/118 (48%)
Frame = +2 / +3
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAI 469
PG + EIG + ++ ++FTGST G + + + LEL GN
Sbjct: 339 PGVLNIVMGNAAEIGDTLLESSQVRKITFTGSTAVGKKLMAAAAGTVKRVSLELGGNAPC 518
Query: 470 IVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGD 643
I+ DDAD+++AV+ L A GQ C R+++ + IY+ F + +++G+
Sbjct: 519 IIFDDADLEVAVKGTLAAKFRNTGQTCVCVNRILVQDGIYEKFASLFASAVQDMQVGN 692
Score = 55.6 bits (115), Expect(2) = 8e-025
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2 / +3
Query: 41 SRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 220
++++ G IIP + ++ + P+GVVG IT +NFP A++ AL G VV K A
Sbjct: 99 AKRIYGDIIPPTVADRRLLVLKQPVGVVGAITPWNFPLAMITRKVAPALASGCTVVVKPA 278
Query: 221 PTTPLITIAMTKI 259
TPL +A ++
Sbjct: 279 ELTPLTALAAAEL 317
>gb|CO163412.1|CO163412 FLD1_41_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_41_B05_A029 5', mRNA sequence
Length = 794
Score = 79.4 bits (167), Expect(2) = 5e-024
Identities = 38/111 (34%), Positives = 60/111 (54%)
Frame = +2 / -2
Query: 467 IIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDP 646
+I+MDDADI+ AV A +GQ C R+ + E I+ F+ ++VE K+ +GDP
Sbjct: 790 LIIMDDADIEEAVNLAHTAIFFNSGQVCCAGSRIYVQEGIHDKFVKRVVERAKKQVVGDP 611
Query: 647 LEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
GP E L+ I+ K +G K+L GG+ + +G +++PTI
Sbjct: 610 FNPEVEHGPQIDKTQFEKILEYIEHGKREGAKLLTGGNRVGEKGFYIEPTI 458
Score = 52.8 bits (109), Expect(2) = 5e-024
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / -2
Query: 830 KEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDII 958
KEE+FGPV+ + KF+T++EAIE+ N GL++ I +K D +
Sbjct: 424 KEEIFGPVMSIFKFRTIEEAIELGNKTIYGLAAGIVSKDIDTV 296
>gb|DR053556.1|DR053556 RTCA1_11_H08.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_11_H08_A029 5', mRNA sequence
Length = 614
Score = 89.5 bits (189), Expect(3) = 9e-024
Identities = 43/119 (36%), Positives = 65/119 (54%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+MDDADI+ AV A +GQ C R+ + E I+ FL ++VE
Sbjct: 172 LELGGKSPLIIMDDADIEEAVNLAHTAIFFNSGQVCCAGSRIYVQEGIHDKFLKRVVERA 351
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K+ +GDP GP E L+ I+ K +G K+L GG+ + +G +++PTI
Sbjct: 352 KKQVVGDPFNPEVEHGPQIDKTQFEKILEYIEHGKREGAKLLTGGNRVGEKGFYIEPTI 528
Score = 31.3 bits (62), Expect(3) = 9e-024
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 830 KEELFGPVLYVMKFQTL 880
KEE+FGPV+ + KF+T+
Sbjct: 562 KEEIFGPVMSIFKFRTI 612
Score = 28.1 bits (55), Expect(3) = 9e-024
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2 / +1
Query: 290 PGAIFTSFCGGTEIGQAIALDIRIPLVSFTGSTRAGLMV 406
PG + G G AI+ + I V+FTGST G +V
Sbjct: 16 PGVLNVITGFGETAGAAISSHMDIDKVAFTGSTEIGRIV 132
>gb|CF389302.1|CF389302 RTDR2_9_A07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_9_A07_A021 5', mRNA
sequence
Length = 767
Score = 79.0 bits (166), Expect(2) = 1e-023
Identities = 38/106 (35%), Positives = 53/106 (50%)
Frame = +2 / -1
Query: 482 DADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGT 661
DAD+ AV A GQ C RL + E IY FL + V K+ +GDP + G
Sbjct: 767 DADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARAKKHVVGDPFQPGV 588
Query: 662 LLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 587 QHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 450
Score = 51.9 bits (107), Expect(2) = 1e-023
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / -1
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 443 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 303
>gb|DR179598.1|DR179598 RTMNUT1_23_D08.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_D08_A029 3', mRNA sequence
Length = 716
Score = 79.0 bits (166), Expect(2) = 1e-023
Identities = 38/106 (35%), Positives = 53/106 (50%)
Frame = +2 / +3
Query: 482 DADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGT 661
DAD+ AV A GQ C RL + E IY FL + V K+ +GDP + G
Sbjct: 3 DADVDTAVNIAHLAIFNNMGQVCLAGSRLFVQEGIYDDFLKKAVARAKKHVVGDPFQPGV 182
Query: 662 LLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
GP E L+ IQ K G +LFGG+++ +G +++PTI
Sbjct: 183 QHGPQIDKMQYEKVLEYIQYGKRDGANLLFGGNSLGDKGFYIEPTI 320
Score = 51.9 bits (107), Expect(2) = 1e-023
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 803 EITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTK 943
++ + KEE+FGPV+ ++KF+T++E IE N GL + I TK
Sbjct: 327 DVEDDMQIAKEEIFGPVMSILKFKTIEEVIERGNKTIYGLGAGIITK 467
>gb|DR687598.1|DR687598 EST1077680 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABU36 3' end, mRNA sequence
Length = 733
Score = 80.3 bits (169), Expect(2) = 2e-023
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2 / +1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEV 103
+E IDMCDYAVGLSRQLNGSIIPSERPNHMMMEV
Sbjct: 547 QEFIDMCDYAVGLSRQLNGSIIPSERPNHMMMEV 648
Score = 49.6 bits (102), Expect(2) = 2e-023
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2 / +3
Query: 104 WNPLGVVGVITAFNFPCAVL 163
WNPLG+V VITAFNFPCAVL
Sbjct: 648 WNPLGIVRVITAFNFPCAVL 707
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 846,864,705
Number of Sequences: 355925
Number of extensions: 13148544
Number of successful extensions: 63191
Number of sequences better than 1.0e-020: 64
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 22984903440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)