TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCL35a05.yg.2.1
(567 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 188 3e-056
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 188 3e-056
dbj|AP004789.3| Oryza sativa (japonica cultivar-group) geno... 188 3e-056
dbj|AP005778.3| Oryza sativa (japonica cultivar-group) geno... 188 3e-056
gb|AACV01004078.1| Oryza sativa (japonica cultivar-group) c... 188 3e-056
ref|XM_465291.1| Oryza sativa (japonica cultivar-group), mRNA 188 3e-056
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 188 6e-046
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 188 6e-046
gb|AQ258518.1|AQ258518 nbxb0020D06f CUGI Rice BAC Library O... 181 4e-045
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 155 3e-041
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 155 3e-041
gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 ... 155 3e-041
gb|AACV01007572.1| Oryza sativa (japonica cultivar-group) c... 155 3e-041
ref|XM_469178.1| Oryza sativa (japonica cultivar-group), mRNA 155 3e-041
gb|CB685927.1|CB685927 OSJNEf16M10.f OSJNEf Oryza sativa (j... 136 7e-041
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 155 4e-036
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 155 4e-036
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 155 4e-036
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +3
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 13100265 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 13100444
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 13100445 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 13100624
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 13100625 GVLIRYVA*QACLI 13100666
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 13100266 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 13100445
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 13100446 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 13100625
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 13100626 ESSSDMLPSKLASS 13100667
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -2
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 13100652 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 13100473
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 13100472 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 13100293
Query: 449 NXXXNH 466
N NH
Sbjct: 13100292 NIIKNH 13100275
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -3
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 13100579 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 13100400
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 13100399 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 13100265
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +2
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 13100393 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 13100572
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 13100573 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 13100665
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -1
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 13100665 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 13100516
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -1
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 13100482 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 13100303
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 13100302 LHAQHYQKP 13100276
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +1
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 13100671 AAPQVVPISTPKKSYGLMGRFSQLL 13100745
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +2
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 13100276 WFLIMLSMKSSLQDALMVFYQWRSW 13100350
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 13100745 Q*LTKPPHEPI*FFRSADWHNLR 13100677
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -3
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 13100744 NS*LNLPMSPYDFLGVLIGTT*GA 13100673
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 13100678 LKLCQSALLKNHMGSWGGLVSYC 13100746
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -1
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 13100746 TIAD*TSP*AHMIF*EC*LAQLE 13100678
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +2
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 7179668 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 7179847
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 7179848 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 7180027
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 7180028 GVLIRYVA*QACLI 7180069
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 7179669 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 7179848
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 7179849 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 7180028
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 7180029 ESSSDMLPSKLASS 7180070
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -1
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 7180055 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 7179876
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 7179875 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 7179696
Query: 449 NXXXNH 466
N NH
Sbjct: 7179695 NIIKNH 7179678
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -2
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 7179982 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 7179803
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 7179802 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 7179668
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +1
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 7179796 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 7179975
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 7179976 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 7180068
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -3
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 7180068 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 7179919
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -3
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 7179885 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 7179706
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 7179705 LHAQHYQKP 7179679
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +3
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 7180074 AAPQVVPISTPKKSYGLMGRFSQLL 7180148
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +1
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 7179679 WFLIMLSMKSSLQDALMVFYQWRSW 7179753
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -1
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 7180148 Q*LTKPPHEPI*FFRSADWHNLR 7180080
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -2
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 7180147 NS*LNLPMSPYDFLGVLIGTT*GA 7180076
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 7180081 LKLCQSALLKNHMGSWGGLVSYC 7180149
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -3
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 7180149 TIAD*TSP*AHMIF*EC*LAQLE 7180081
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0476C12
Length = 157570
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +2
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 123293 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 123472
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 123473 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 123652
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 123653 GVLIRYVA*QACLI 123694
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 123294 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 123473
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 123474 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 123653
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 123654 ESSSDMLPSKLASS 123695
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -3
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 123680 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 123501
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 123500 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 123321
Query: 449 NXXXNH 466
N NH
Sbjct: 123320 NIIKNH 123303
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -1
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 123607 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 123428
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 123427 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 123293
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +1
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 123421 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 123600
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 123601 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 123693
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -2
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 123693 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 123544
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -2
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 123510 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 123331
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 123330 LHAQHYQKP 123304
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +3
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 123699 AAPQVVPISTPKKSYGLMGRFSQLL 123773
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +1
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 123304 WFLIMLSMKSSLQDALMVFYQWRSW 123378
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -3
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 123773 Q*LTKPPHEPI*FFRSADWHNLR 123705
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -1
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 123772 NS*LNLPMSPYDFLGVLIGTT*GA 123701
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 123706 LKLCQSALLKNHMGSWGGLVSYC 123774
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -2
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 123774 TIAD*TSP*AHMIF*EC*LAQLE 123706
>dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0042G06
Length = 123571
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +3
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 16746 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 16925
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 16926 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 17105
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 17106 GVLIRYVA*QACLI 17147
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 16747 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 16926
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 16927 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 17106
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 17107 ESSSDMLPSKLASS 17148
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -2
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 17133 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 16954
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 16953 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 16774
Query: 449 NXXXNH 466
N NH
Sbjct: 16773 NIIKNH 16756
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -3
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 17060 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 16881
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 16880 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 16746
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +2
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 16874 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 17053
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 17054 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 17146
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -1
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 17146 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 16997
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -1
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 16963 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 16784
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 16783 LHAQHYQKP 16757
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +1
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 17152 AAPQVVPISTPKKSYGLMGRFSQLL 17226
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +2
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 16757 WFLIMLSMKSSLQDALMVFYQWRSW 16831
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 17226 Q*LTKPPHEPI*FFRSADWHNLR 17158
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -3
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 17225 NS*LNLPMSPYDFLGVLIGTT*GA 17154
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 17159 LKLCQSALLKNHMGSWGGLVSYC 17227
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -1
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 17227 TIAD*TSP*AHMIF*EC*LAQLE 17159
>gb|AACV01004078.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004078, whole
genome shotgun sequence
Length = 22546
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +1
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 9943 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 10122
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 10123 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 10302
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 10303 GVLIRYVA*QACLI 10344
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +2
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 9944 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 10123
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 10124 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 10303
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 10304 ESSSDMLPSKLASS 10345
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -1
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 10330 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 10151
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 10150 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 9971
Query: 449 NXXXNH 466
N NH
Sbjct: 9970 NIIKNH 9953
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -2
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 10257 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 10078
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 10077 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 9943
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +3
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 10071 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 10250
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 10251 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 10343
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -3
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 10343 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 10194
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -3
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 10160 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 9981
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 9980 LHAQHYQKP 9954
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +2
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 10349 AAPQVVPISTPKKSYGLMGRFSQLL 10423
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +3
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 9954 WFLIMLSMKSSLQDALMVFYQWRSW 10028
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -1
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 10423 Q*LTKPPHEPI*FFRSADWHNLR 10355
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -2
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 10422 NS*LNLPMSPYDFLGVLIGTT*GA 10351
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 10356 LKLCQSALLKNHMGSWGGLVSYC 10424
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -3
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 10424 TIAD*TSP*AHMIF*EC*LAQLE 10356
>ref|XM_465291.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 4275
Score = 188 bits (404), Expect(2) = 3e-056
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +3
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 2328 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 2507
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 2508 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 2687
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 2688 GVLIRYVA*QACLI 2729
Score = 187 bits (403), Expect(2) = 1e-049
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 2329 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 2508
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 2509 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 2688
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 2689 ESSSDMLPSKLASS 2730
Score = 160 bits (345), Expect(2) = 4e-043
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -1
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 2715 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 2536
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 2535 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 2356
Query: 449 NXXXNH 466
N NH
Sbjct: 2355 NIIKNH 2338
Score = 141 bits (302), Expect(2) = 2e-036
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -2
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 2642 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 2463
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 2462 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 2328
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +2
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 2456 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 2635
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 2636 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 2728
Score = 79.0 bits (166), Expect(3) = 1e-027
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -3
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 2728 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 2579
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 32/69 (46%), Positives = 33/69 (47%)
Frame = +1 / -3
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK**I*IVPXXXXXXXXXXXXXXPVSPPIXXHQCIL*XP 438
P * W P RKLLQDH RKCS + * IVP P SP I H CIL*
Sbjct: 2545 PF*PWCPHRKLLQDH*YRKCSARW*TYIVPQQDHSTHHQDDRMPPTSPLIENH*CIL*GT 2366
Query: 439 XXAQXXXKP 465
AQ KP
Sbjct: 2365 LHAQHYQKP 2339
Score = 54.7 bits (113), Expect(2) = 3e-056
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +1
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 2734 AAPQVVPISTPKKSYGLMGRFSQLL 2808
Score = 42.8 bits (87), Expect(2) = 1e-034
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / +2
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 2339 WFLIMLSMKSSLQDALMVFYQWRSW 2413
Score = 37.7 bits (76), Expect(2) = 4e-043
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -1
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 2808 Q*LTKPPHEPI*FFRSADWHNLR 2740
Score = 35.0 bits (70), Expect(2) = 2e-036
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -2
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 2807 NS*LNLPMSPYDFLGVLIGTT*GA 2736
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 2741 LKLCQSALLKNHMGSWGGLVSYC 2809
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -3
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 2809 TIAD*TSP*AHMIF*EC*LAQLE 2741
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 188 bits (404), Expect = 6e-046
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +3
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 13100265 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 13100444
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 13100445 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 13100624
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 13100625 GVLIRYVA*QACLI 13100666
Score = 187 bits (403), Expect = 8e-046
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 13100266 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 13100445
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 13100446 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 13100625
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 13100626 ESSSDMLPSKLASS 13100667
Score = 160 bits (345), Expect = 8e-038
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -1
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 13100652 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 13100473
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 13100472 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 13100293
Query: 449 NXXXNH 466
N NH
Sbjct: 13100292 NIIKNH 13100275
Score = 141 bits (302), Expect = 7e-032
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -2
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 13100579 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 13100400
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 13100399 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 13100265
Score = 127 bits (272), Expect = 1e-027
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +2
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 13100393 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 13100572
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 13100573 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 13100665
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 188 bits (404), Expect = 6e-046
Identities = 80/134 (59%), Positives = 100/134 (74%)
Frame = -2 / +2
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 13146716 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 13146895
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPHW*YN**S 117
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH *++**S
Sbjct: 13146896 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPHR*HS**S 13147075
Query: 116 GILFRFITWQTYFI 75
G+L R++ Q I
Sbjct: 13147076 GVLIRYVA*QACLI 13147117
Score = 187 bits (403), Expect = 8e-046
Identities = 85/134 (63%), Positives = 90/134 (67%)
Frame = -3 / +3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 13146717 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 13146896
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 13146897 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQ 13147076
Query: 115 XXXXXSLPGKHTSS 74
LP K SS
Sbjct: 13147077 ESSSDMLPSKLASS 13147118
Score = 160 bits (345), Expect = 8e-038
Identities = 74/126 (58%), Positives = 81/126 (64%)
Frame = +2 / -3
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 13147103 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 13146924
Query: 269 FGILPENYYRIINVGSVQQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXL 448
G+L E+ YRIIN+GSVQQ E *CH Q RH * TINASCK L
Sbjct: 13146923 LGVLTESCYRIINIGSVQQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFML 13146744
Query: 449 NXXXNH 466
N NH
Sbjct: 13146743 NIIKNH 13146726
Score = 141 bits (302), Expect = 7e-032
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / -1
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 13147030 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 13146851
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 13146850 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 13146716
Score = 127 bits (272), Expect = 1e-027
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -1 / +1
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 13146844 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 13147023
Query: 168 IR*DFFLVASLVIQLMIRNPLQIHYLANILH 76
I+* +FLVAS V QLMIR+P QI LA++ H
Sbjct: 13147024 IK*AYFLVASPVTQLMIRSPHQICCLASLPH 13147116
>gb|AQ258518.1|AQ258518 nbxb0020D06f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0020D06f, DNA sequence
Length = 783
Score = 181 bits (390), Expect(2) = 4e-045
Identities = 80/112 (71%), Positives = 85/112 (75%)
Frame = -3 / -3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A+SVV VE LTGCI+G LSVAKLA YH VAL KFTTLLNTSYI+DP
Sbjct: 478 AISVVFDNVEHEEFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDP 299
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRL 140
V FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLPG L
Sbjct: 298 VTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCL 143
Score = 172 bits (370), Expect = 3e-041
Identities = 71/113 (62%), Positives = 86/113 (76%)
Frame = -2 / -2
Query: 476 CRVCGXXXC*AXXGXYRMH*WXXIGGETGXXLSS**CSE*SCCGTI*IHYFVEHFLH**S 297
C + G C*A YRMH*W I GE G LSS**C E*SCCGT+*+H+ EHFL+**S
Sbjct: 479 CYLSGF**C*A*RVPYRMH*WFSISGEVGGILSS**CVE*SCCGTM*VHHLAEHFLY**S 300
Query: 296 CNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSSWSPH 138
CN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +SW PH
Sbjct: 299 CNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTSWLPH 141
Score = 142 bits (304), Expect(2) = 3e-032
Identities = 63/109 (57%), Positives = 69/109 (63%)
Frame = +2 / +2
Query: 140 EATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPSFGILPENYYRIINVGSV 319
EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S G+L E+ YRIIN+GSV
Sbjct: 143 EATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSSLGVLTESCYRIINIGSV 322
Query: 320 QQSSEFR*CHXXXXXXXXXXXXXXQFRHR*XTINASCKXXXXLNXXXNH 466
QQ E *CH Q RH * TINASCK LN NH
Sbjct: 323 QQGGELT*CHNKIIQHIIKMIECRQLRH**KTINASCKELFMLNIIKNH 469
Score = 141 bits (302), Expect = 7e-032
Identities = 67/105 (63%), Positives = 73/105 (69%)
Frame = +3 / +3
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKVVNLD 341
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KVVNL
Sbjct: 165 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKVVNLH 344
Query: 342 SAXXXXXXXXXXXXXXASFATDXXPSMHPVXTXXCSTXXXTTDTA 476
SA A+FATD P MHPV CST TT+ A
Sbjct: 345 SATTRSFNTSSR**NAANFATDRKPLMHPVRNSSCSTLSKTTEIA 479
Score = 105 bits (224), Expect(2) = 5e-028
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = -1 / -1
Query: 348 WHYLNSLLC*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XC 169
WHY++S C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* C
Sbjct: 351 WHYVSSPPC*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DC 172
Query: 168 IR*DFFLVAS 139
I+* +FLVAS
Sbjct: 171 IK*AYFLVAS 142
Score = 42.8 bits (87), Expect(2) = 5e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1 / -1
Query: 465 WFXXXLSXXXXLQDALMVXYRWRNW 391
WF LS LQDALMV Y+WR+W
Sbjct: 468 WFLIMLSMKSSLQDALMVFYQWRSW 394
Score = 24.0 bits (46), Expect(2) = 4e-045
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 135 VIQLMIRNPLQIHYLANI 82
V QLMIR+P QI LA++
Sbjct: 137 VTQLMIRSPHQICCLASL 84
Score = 21.7 bits (41), Expect(2) = 3e-032
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 89 AR**I*RGFLIISCIT 136
AR I* G LIISC+T
Sbjct: 91 ARQHI**GLLIISCVT 138
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 155 bits (333), Expect(2) = 3e-041
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 12529288 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 12529467
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 12529468 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 12529647
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 12529648 EVSAETVQGKPTHSS 12529692
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +1
Query: 94 PGKHTSSAPQVLPISTPRKTYGLMGRFSQLL 2
P + S + + TPRK+ GLMGRFSQLL
Sbjct: 12529678 PTHSSISTSHIPVMGTPRKSSGLMGRFSQLL 12529770
>ref|NT_107185.1| Oryza sativa (japonica cultivar-group)
Length = 1133266
Score = 155 bits (333), Expect(2) = 3e-041
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 1044486 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 1044665
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 1044666 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 1044845
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 1044846 EVSAETVQGKPTHSS 1044890
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +3
Query: 94 PGKHTSSAPQVLPISTPRKTYGLMGRFSQLL 2
P + S + + TPRK+ GLMGRFSQLL
Sbjct: 1044876 PTHSSISTSHIPVMGTPRKSSGLMGRFSQLL 1044968
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete
sequence
Length = 140720
Score = 155 bits (333), Expect(2) = 3e-041
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / -1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 88781 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 88602
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 88601 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 88422
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 88421 EVSAETVQGKPTHSS 88377
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / -1
Query: 94 PGKHTSSAPQVLPISTPRKTYGLMGRFSQLL 2
P + S + + TPRK+ GLMGRFSQLL
Sbjct: 88391 PTHSSISTSHIPVMGTPRKSSGLMGRFSQLL 88299
>gb|AACV01007572.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007572, whole
genome shotgun sequence
Length = 22797
Score = 155 bits (333), Expect(2) = 3e-041
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / -3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 17038 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 16859
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 16858 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 16679
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 16678 EVSAETVQGKPTHSS 16634
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / -3
Query: 94 PGKHTSSAPQVLPISTPRKTYGLMGRFSQLL 2
P + S + + TPRK+ GLMGRFSQLL
Sbjct: 16648 PTHSSISTSHIPVMGTPRKSSGLMGRFSQLL 16556
>ref|XM_469178.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5415
Score = 155 bits (333), Expect(2) = 3e-041
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 3253 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 3432
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 3433 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 3612
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 3613 EVSAETVQGKPTHSS 3657
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3 / +1
Query: 94 PGKHTSSAPQVLPISTPRKTYGLMGRFSQLL 2
P + S + + TPRK+ GLMGRFSQLL
Sbjct: 3643 PTHSSISTSHIPVMGTPRKSSGLMGRFSQLL 3735
>gb|CB685927.1|CB685927 OSJNEf16M10.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16M10 5', mRNA sequence
Length = 760
Score = 136 bits (292), Expect(2) = 7e-041
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = -3 / +3
Query: 328 TLLNTSYIDDPVIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLP 149
TLLNTSYI+DPV FGEDTKARMATEAVFTIAT +GDHIRSGWRNI+DCIL HKI LLP
Sbjct: 3 TLLNTSYINDPVTTFGEDTKARMATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLP 182
Query: 148 GRLXXXXXXXXXXXXXSLPGKHTSS 74
G L LP K SS
Sbjct: 183 GCLTGDTADDQESSSDMLPSKLASS 257
Score = 126 bits (270), Expect(2) = 8e-033
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +2 / -3
Query: 89 AR**I*RGFLIISCITSEATRKKSYLMXX*NTIYYVPPSTAYVITISSCYSENSFCCHPS 268
AR I* G LIISC+T EATRK +Y M *N IYYVPP TAYVIT+SSCYS+NS CH S
Sbjct: 242 ARQHI**GLLIISCVTGEATRK*AYFMQS*NAIYYVPPPTAYVITMSSCYSKNSLGCHSS 63
Query: 269 FGILPENYYRIINVGSVQQ 325
G+L E+ YRIIN+GSVQQ
Sbjct: 62 LGVLTESCYRIINIGSVQQ 6
Score = 125 bits (268), Expect(2) = 3e-031
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = -2 / +2
Query: 329 YFVEHFLH**SCNSFRGGYQS*DGNRSCFHYSNCLW*SHTQWMEEHNRLYFXXA*DRTSS 150
+ EHFL+**SCN+FR G+Q *+GNR CF+YSN W*SHTQW+EEH+RL+F A*++ +S
Sbjct: 2 HLAEHFLY**SCNNFR*GHQG*NGNRGCFYYSNYSW*SHTQWVEEHSRLHFKIA*NKPTS 181
Query: 149 WSPHW*YN**SGILFRFITWQTYFI 75
W PH *++**SG+L R++ Q I
Sbjct: 182 WLPHR*HS**SGVLIRYVA*QACLI 256
Score = 115 bits (246), Expect = 4e-024
Identities = 58/83 (69%), Positives = 65/83 (78%)
Frame = -1 / +1
Query: 324 C*TLPTLMIL**FSGRIPKLGWQQKLFSL*QLLMVITYAVDGGT**IVF*XCIR*DFFLV 145
C*TLP LMIL* S R P+L WQ +LF L*QLLMVITYAV GGT**I F* CI+* +FLV
Sbjct: 7 C*TLPILMIL*QLSVRTPRLEWQPRLFLL*QLLMVITYAVGGGT**IAF*DCIK*AYFLV 186
Query: 144 ASLVIQLMIRNPLQIHYLANILH 76
AS V QLMIR+P QI LA++ H
Sbjct: 187 ASPVTQLMIRSPHQICCLASLPH 255
Score = 99.6 bits (211), Expect(2) = 5e-024
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = +3 / -1
Query: 162 ILCXXKIQSIMFLHPLRM*SP*AVAIVKTASVAILALVSSPKTITGSSM*EVFNKV 329
ILC K+QS MFLHPLRM*SP* VAIVKTASVAILALVSSPK +TGS +*EVF+KV
Sbjct: 169 ILCNLKMQSTMFLHPLRM*SP*VVAIVKTASVAILALVSSPKVVTGSLI*EVFSKV 2
Score = 79.0 bits (166), Expect(3) = 3e-021
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = +1 / -2
Query: 76 MKYVCQVMNLKRIPDHQLYHQ*GDQEEVLSYAXLKYNLLCSSIHCVCDHH 225
M+ C L R PDHQL H+*G+QE L YA LK NLLCSS HCVCDHH
Sbjct: 255 MRQAC*ATYLMRTPDHQLCHR*GNQEVGLFYAILKCNLLCSSTHCVCDHH 106
Score = 54.7 bits (113), Expect(2) = 7e-041
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = -3 / +3
Query: 76 SAPQVLPISTPRKTYGLMGRFSQLL 2
+APQV+PISTP+K+YGLMGRFSQLL
Sbjct: 261 AAPQVVPISTPKKSYGLMGRFSQLL 335
Score = 37.7 bits (76), Expect(2) = 8e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2 / -3
Query: 2 Q*LAEPPHQSISFPRSANWQNLR 70
Q*L +PPH+ I F RSA+W NLR
Sbjct: 335 Q*LTKPPHEPI*FFRSADWHNLR 267
Score = 36.3 bits (73), Expect(3) = 3e-021
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1 / -2
Query: 259 PS*LWYPPRKLLQDHQCRKCSTK 327
P * W P RKLLQDH RKCS +
Sbjct: 72 PF*PWCPHRKLLQDH*YRKCSAR 4
Score = 35.0 bits (70), Expect(2) = 5e-024
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / -1
Query: 3 SSWLNLPISP*VFRGVLIGKT*GA 74
+S LNLP+SP F GVLIG T*GA
Sbjct: 334 NS*LNLPMSPYDFLGVLIGTT*GA 263
Score = 33.1 bits (66), Expect(2) = 3e-031
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 69 LKFCQLALLGKLMD*WGGSANYC 1
LK CQ ALL M WGG +YC
Sbjct: 268 LKLCQSALLKNHMGSWGGLVSYC 336
Score = 27.6 bits (54), Expect(3) = 3e-021
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -2
Query: 1 TVVG*TSPSVHKFSEEC*LAKLE 69
T+ *TSP H EC*LA+LE
Sbjct: 336 TIAD*TSP*AHMIF*EC*LAQLE 268
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 155 bits (333), Expect = 4e-036
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 26579995 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 26580174
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 26580175 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 26580354
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 26580355 EVSAETVQGKPTHSS 26580399
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 155 bits (333), Expect = 4e-036
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +1
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 26010448 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 26010627
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 26010628 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 26010807
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 26010808 EVSAETVQGKPTHSS 26010852
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 155 bits (333), Expect = 4e-036
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = -3 / +3
Query: 475 AVSVVXXXVEXXXVLTGCIDGXLSVAKLAXXYHXXXXXXXXXVALSKFTTLLNTSYIDDP 296
A++VV E VL C+DG L VAK++ +H V+L KFTTLLNTS +++P
Sbjct: 25919139 AIAVVFDHSEHEEVLLACVDGFLGVAKISAFHHLEDVLDDLVVSLCKFTTLLNTSLVEEP 25919318
Query: 295 VIVFGEDTKARMATEAVFTIATAYGDHIRSGWRNIIDCILXXHKIGLLPGRLXXXXXXXX 116
V FG+D KAR+ATE +FTIA YGD+IR+GWRN++DCIL HK+GLLP R+
Sbjct: 25919319 VTAFGDDLKARLATETLFTIANRYGDYIRTGWRNVLDCILRLHKLGLLPARVASDAADDS 25919498
Query: 115 XXXXXSLPGKHTSSA 71
++ GK T S+
Sbjct: 25919499 EVSAETVQGKPTHSS 25919543
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,758,425,705
Number of Sequences: 438736
Number of extensions: 33086155
Number of successful extensions: 100277
Number of sequences better than 1.0e-020: 27
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 118043460210
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)