TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1366945.2.1
(1191 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 119 4e-053
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 119 4e-053
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 119 4e-053
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 119 4e-053
dbj|AP003771.2| Oryza sativa (japonica cultivar-group) geno... 119 4e-053
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 119 4e-053
gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) c... 119 4e-053
dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA... 119 4e-053
dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA... 119 4e-053
dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA... 93 1e-035
gb|AU070542.1|AU070542 AU070542 Rice shoot Oryza sativa (ja... 104 1e-027
dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA... 80 3e-027
gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (j... 80 3e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-026
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 82 1e-026
emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromoso... 82 1e-026
gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) c... 82 1e-026
dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA... 82 1e-026
ref|XM_473788.1| Oryza sativa (japonica cultivar-group), p... 82 1e-026
gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (j... 79 1e-026
gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (j... 80 1e-026
gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (j... 82 1e-026
gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (j... 78 2e-026
dbj|AP005249.3| Oryza sativa (japonica cultivar-group) geno... 85 7e-024
dbj|AP004657.2| Oryza sativa (japonica cultivar-group) geno... 85 7e-024
dbj|AP004644.1| Oryza sativa (japonica cultivar-group) chro... 85 7e-024
gb|AACV01017705.1| Oryza sativa (japonica cultivar-group) c... 85 7e-024
ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA 85 7e-024
gb|CB655759.1|CB655759 OSJNEc09H12.r OSJNEc Oryza sativa (j... 70 8e-024
gb|AACV01010434.1| Oryza sativa (japonica cultivar-group) c... 82 2e-023
dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA... 82 3e-023
ref|XM_473787.1| Oryza sativa (japonica cultivar-group), p... 82 3e-023
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 77 8e-023
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 77 8e-023
dbj|AP005398.3| Oryza sativa (japonica cultivar-group) geno... 77 8e-023
gb|AACV01003896.1| Oryza sativa (japonica cultivar-group) c... 77 9e-023
emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromoso... 69 6e-022
dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA... 69 6e-022
ref|XM_473793.1| Oryza sativa (japonica cultivar-group), p... 69 6e-022
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 86 7e-022
ref|NT_107129.1| Oryza sativa (japonica cultivar-group) 86 8e-022
gb|AC134925.4| Oryza sativa (japonica cultivar-group) chrom... 86 8e-022
gb|AC136481.6| Oryza sativa (japonica cultivar-group) chrom... 86 8e-022
gb|AACV01023313.1| Oryza sativa (japonica cultivar-group) c... 86 8e-022
dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA... 86 8e-022
dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA... 86 8e-022
dbj|AP003907.3| Oryza sativa (japonica cultivar-group) geno... 79 1e-021
ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA 79 1e-021
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-021
dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXR... 68 2e-021
dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-021
ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-... 68 2e-021
dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-021
ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-021
gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing ... 68 2e-021
gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (j... 65 4e-021
gb|CB000335.1|CB000335 S345U_F07 Rice cold stress germinati... 77 5e-021
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 66 7e-021
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 28750351 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 28750500
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 28750561 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 28750695
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 27827406 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 27827555
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 27827616 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 27827750
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 10128669 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 10128818
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 10128879 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 10129013
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -2
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 10128820 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 10128671
Score = 82.6 bits (174), Expect(3) = 5e-030
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W+NQ+L +RMRWVQ K+MIYNYC D KRFPQGVPAEC +
Sbjct: 10151518 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECSM 10151390
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 10140730 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 10140849
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -2
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 10129009 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 10128881
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +1 / +3
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFS 108
++AS+WNA++WATQGGRVK DWS+APFVA++R ++
Sbjct: 10133595 VFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 10133699
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 10140898 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 10141029
Score = 61.1 bits (127), Expect(3) = 5e-030
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1 / -2
Query: 37 ATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
ATQGGRVK DW+ APF AS+RGF ADACV G
Sbjct: 10151692 ATQGGRVKTDWTHAPFSASYRGFRADACVVAAG 10151594
Score = 55.6 bits (115), Expect(2) = 2e-021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++ S+ + WV+ +M Y+YCAD KRFP PAEC
Sbjct: 10133769 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 10133891
Score = 29.9 bits (59), Expect(3) = 5e-030
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQG 48
RLY+SLWNADD G
Sbjct: 10151729 RLYSSLWNADDSGDAG 10151682
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 6215836 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 6215985
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 6216046 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 6216180
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 6215987 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 6215838
Score = 92.7 bits (196), Expect(2) = 9e-036
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
RLY+SLWNADDWATQGGRVK DW+ APF AS+RGF ADACV G
Sbjct: 6238892 RLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAG 6238758
Score = 82.6 bits (174), Expect(2) = 9e-036
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1 / -1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W+NQ+L +RMRWVQ K+MIYNYC D KRFPQGVPAEC +
Sbjct: 6238682 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECSM 6238554
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 6227897 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 6228016
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 6216176 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 6216048
Score = 71.2 bits (149), Expect(2) = 2e-021
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +1 / +1
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFS 108
++AS+WNA++WATQGGRVK DWS+APFVA++R ++
Sbjct: 6220762 VFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 6220866
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 6228065 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 6228196
Score = 55.6 bits (115), Expect(2) = 2e-021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++ S+ + WV+ +M Y+YCAD KRFP PAEC
Sbjct: 6220936 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 6221058
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0622F03
Length = 170064
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 150917 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 151066
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 151127 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 151261
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 151068 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 150919
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 162978 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 163097
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 151257 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 151129
Score = 71.2 bits (149), Expect(2) = 3e-021
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +1 / +2
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFS 108
++AS+WNA++WATQGGRVK DWS+APFVA++R ++
Sbjct: 155843 VFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 155947
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +3
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 163146 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 163277
Score = 55.6 bits (115), Expect(2) = 3e-021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++ S+ + WV+ +M Y+YCAD KRFP PAEC
Sbjct: 156017 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 156139
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0028E05
Length = 157631
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 58126 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 58275
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 58336 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 58470
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 58277 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 58128
Score = 92.7 bits (196), Expect(2) = 1e-035
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
RLY+SLWNADDWATQGGRVK DW+ APF AS+RGF ADACV G
Sbjct: 81182 RLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAG 81048
Score = 82.6 bits (174), Expect(2) = 1e-035
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1 / -1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W+NQ+L +RMRWVQ K+MIYNYC D KRFPQGVPAEC +
Sbjct: 80972 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECSM 80844
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 70187 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 70306
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 58466 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 58338
Score = 71.2 bits (149), Expect(2) = 3e-021
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +1 / +1
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFS 108
++AS+WNA++WATQGGRVK DWS+APFVA++R ++
Sbjct: 63052 VFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 63156
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 70355 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 70486
Score = 55.6 bits (115), Expect(2) = 3e-021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++ S+ + WV+ +M Y+YCAD KRFP PAEC
Sbjct: 63226 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 63348
>gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014850, whole
genome shotgun sequence
Length = 60324
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 45982 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 45833
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 45772 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 45638
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / +3
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 45831 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 45980
Score = 82.6 bits (174), Expect(3) = 6e-030
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W+NQ+L +RMRWVQ K+MIYNYC D KRFPQGVPAEC +
Sbjct: 23133 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECSM 23261
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 33921 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 33802
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / +3
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 45642 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 45770
Score = 71.2 bits (149), Expect(2) = 3e-021
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +1 / -3
Query: 4 LYASLWNADDWATQGGRVKADWSKAPFVASFRGFS 108
++AS+WNA++WATQGGRVK DWS+APFVA++R ++
Sbjct: 41056 VFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 40952
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 33753 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 33622
Score = 61.1 bits (127), Expect(3) = 6e-030
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 37 ATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
ATQGGRVK DW+ APF AS+RGF ADACV G
Sbjct: 22959 ATQGGRVKTDWTHAPFSASYRGFRADACVVAAG 23057
Score = 55.6 bits (115), Expect(2) = 3e-021
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++ S+ + WV+ +M Y+YCAD KRFP PAEC
Sbjct: 40882 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 40760
Score = 29.9 bits (59), Expect(3) = 6e-030
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQG 48
RLY+SLWNADD G
Sbjct: 22922 RLYSSLWNADDSGDAG 22969
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
insert sequence
Length = 1208
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 643 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 792
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 987
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 794 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 645
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 983 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 855
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
insert sequence
Length = 1208
Score = 119 bits (254), Expect(2) = 4e-053
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGGRQRCP 150
R+YASLWNADDWATQGGRVKADWSKAPFVASFR F+ADACVW G QRCP
Sbjct: 643 RVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGAQRCP 792
Score = 114 bits (243), Expect(2) = 4e-053
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWNQ+LSDMSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 987
Score = 100 bits (212), Expect(2) = 5e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -1
Query: 152 SGQRCLPPSQTQASALKPRKEATKGALDQSALTRPPCVAQSSAFHRLAYS 3
+GQRC P QTQASALK RKEATKGAL QSALTRPPCVAQSSAFHRLAY+
Sbjct: 794 TGQRCAPFDQTQASALKSRKEATKGALLQSALTRPPCVAQSSAFHRLAYT 645
Score = 76.2 bits (160), Expect(2) = 5e-036
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 332 RSLHSAGTPCGKRLASAQ*L*IMNLRCTQRMRR*LMSLSCWFH 204
RSLHSAG P G RLAS Q*L*IMN CT MRR*LMSLS WFH
Sbjct: 983 RSLHSAGVPWGNRLASVQ*L*IMNFLCTHLMRR*LMSLSSWFH 855
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
insert sequence
Length = 1253
Score = 92.7 bits (196), Expect(2) = 1e-035
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACVWDGG 135
RLY+SLWNADDWATQGGRVK DW+ APF AS+RGF ADACV G
Sbjct: 650 RLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAG 784
Score = 82.6 bits (174), Expect(2) = 1e-035
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W+NQ+L +RMRWVQ K+MIYNYC D KRFPQGVPAEC +
Sbjct: 860 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECSM 988
>gb|AU070542.1|AU070542 AU070542 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S2643_22A, mRNA sequence
Length = 291
Score = 104 bits (221), Expect(2) = 1e-027
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
WWN+ + MSYRRMRWVQRKFMIYNYC DAKRFPQG PAECKLR*
Sbjct: 133 WWNRSSATMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR* 267
Score = 44.1 bits (90), Expect(2) = 1e-027
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 76 APFVASFRGFSADACVWDGG 135
APFVASFR F+ADACVW G
Sbjct: 2 APFVASFRDFNADACVWSNG 61
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
insert sequence
Length = 1101
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 644 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 763
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / +2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 812 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 943
>gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 3', mRNA sequence
Length = 705
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 458 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 339
Score = 66.6 bits (139), Expect(2) = 3e-027
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / -2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 290 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECTAK* 159
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 8226552 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 8226430
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 8235252 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 8235142
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / -1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 8235108 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 8234983
Score = 51.5 bits (106), Expect(2) = 2e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -1
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 8226342 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 8226241
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 404555 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 404433
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 413163 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 413053
Score = 68.9 bits (144), Expect(2) = 5e-022
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R++ASLWN D WAT+GG+VK +W+ APFVAS+R ++ AC
Sbjct: 451446 RVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 451327
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 413019 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 412894
Score = 60.2 bits (125), Expect(2) = 5e-022
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W ++QL R + W + +MIY+YC D RFPQG+PAEC L
Sbjct: 451227 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 451099
Score = 51.5 bits (106), Expect(2) = 2e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -3
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 404345 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 404244
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
complete sequence
Length = 166804
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 141422 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 141300
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 150030 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 149920
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / -2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 149886 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 149761
Score = 51.5 bits (106), Expect(2) = 2e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -3
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 141212 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 141111
>gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010435, whole
genome shotgun sequence
Length = 5289
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 4877 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 4987
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 5021 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 5146
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
insert sequence
Length = 1109
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 637 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 747
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 781 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 906
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 822
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 547 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 657
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 691 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 816
>gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16J04 3', mRNA sequence
Length = 728
Score = 79.0 bits (166), Expect(2) = 1e-026
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YA+LW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 497 RVYATLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 378
Score = 65.7 bits (137), Expect(2) = 1e-026
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +1 / -1
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG P EC +*
Sbjct: 329 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGFPPECPAK* 198
>gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H13 3', mRNA sequence
Length = 709
Score = 80.3 bits (169), Expect(2) = 1e-026
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF AS+RG +A C
Sbjct: 531 RVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 412
Score = 64.3 bits (134), Expect(2) = 1e-026
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +1 / -2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR MIYNYCAD RFPQG+P EC +*
Sbjct: 363 YQQQLDSASQDRLRQVQRDSMIYNYCADTYRFPQGLPPECTAK* 232
>gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11264_12Z, mRNA sequence
Length = 636
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSA 111
RLY SLWNADDWATQGGRVK DWS+APFVA +R F+A
Sbjct: 125 RLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 235
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +1 / +2
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
++QQ+ + + M+W + +M+Y+YCAD+KRFPQG P EC +
Sbjct: 269 YDQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECSM 394
>gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05J12 3', mRNA sequence
Length = 635
Score = 77.6 bits (163), Expect(2) = 2e-026
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YASLW+A++WATQGGRV+ DWS+APF A +RG +A C
Sbjct: 483 RVYASLWDAEEWATQGGRVRTDWSRAPFTALYRGLAASGC 364
Score = 66.6 bits (139), Expect(2) = 2e-026
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 205 WNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+ QQL S R+R VQR +MIYNYCAD RFPQG+P EC +*
Sbjct: 315 YQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECPAK* 184
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
BAC clone:OSJNBa0087F21
Length = 187401
Score = 85.4 bits (180), Expect(2) = 7e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+ADDWATQGGR+K DWS+APF A FR + A+AC+
Sbjct: 579 RLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANACI 701
Score = 50.1 bits (103), Expect(2) = 7e-024
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+ Q L + ++++ V + IY+YC D++R+P G P EC
Sbjct: 750 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 872
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0031C02
Length = 138843
Score = 85.4 bits (180), Expect(2) = 7e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+ADDWATQGGR+K DWS+APF A FR + A+AC+
Sbjct: 18211 RLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANACI 18333
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+Y S+WNADDWAT GGRVK DWS+APF A FR + A AC
Sbjct: 12683 RVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 12802
Score = 50.1 bits (103), Expect(2) = 7e-024
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+ Q L + ++++ V + IY+YC D++R+P G P EC
Sbjct: 18382 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 18504
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1 / +2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L ++++ V + IY+YC D KRF +P EC + *
Sbjct: 12848 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 12982
>dbj|AP004644.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1117_B06,
*** SEQUENCING IN PROGRESS ***
Length = 95739
Score = 85.4 bits (180), Expect(2) = 7e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+ADDWATQGGR+K DWS+APF A FR + A+AC+
Sbjct: 18663 RLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANACI 18541
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+Y S+WNADDWAT GGRVK DWS+APF A FR + A AC
Sbjct: 24191 RVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 24072
Score = 50.1 bits (103), Expect(2) = 7e-024
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+ Q L + ++++ V + IY+YC D++R+P G P EC
Sbjct: 18492 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 18370
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L ++++ V + IY+YC D KRF +P EC + *
Sbjct: 24026 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 23892
>gb|AACV01017705.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017705, whole
genome shotgun sequence
Length = 21797
Score = 85.4 bits (180), Expect(2) = 7e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+ADDWATQGGR+K DWS+APF A FR + A+AC+
Sbjct: 4160 RLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANACI 4038
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1 / -2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+Y S+WNADDWAT GGRVK DWS+APF A FR + A AC
Sbjct: 9688 RVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 9569
Score = 50.1 bits (103), Expect(2) = 7e-024
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1 / -1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+ Q L + ++++ V + IY+YC D++R+P G P EC
Sbjct: 3989 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 3867
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1 / -2
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L ++++ V + IY+YC D KRF +P EC + *
Sbjct: 9523 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 9389
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 873
Score = 85.4 bits (180), Expect(2) = 7e-024
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RLYAS+W+ADDWATQGGR+K DWS+APF A FR + A+AC+
Sbjct: 568 RLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNYQANACI 690
Score = 50.1 bits (103), Expect(2) = 7e-024
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W+ Q L + ++++ V + IY+YC D++R+P G P EC
Sbjct: 739 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 861
>gb|CB655759.1|CB655759 OSJNEc09H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09H12 3', mRNA sequence
Length = 556
Score = 69.8 bits (146), Expect(2) = 8e-024
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+YA+LW+A++WATQGGRV+ D S+APF AS RG A C
Sbjct: 497 RVYATLWDAEEWATQGGRVRTDCSRAPFTASSRGLPASGC 378
Score = 65.7 bits (137), Expect(2) = 8e-024
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / -3
Query: 211 QQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
QQL S R+R VQR +MIYNYCAD RFPQG P EC
Sbjct: 323 QQLDSASQARLRQVQRDYMIYNYCADTSRFPQGFPPEC 210
>gb|AACV01010434.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010434, whole
genome shotgun sequence
Length = 26704
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 18517 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 18395
Score = 51.5 bits (106), Expect(2) = 2e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / -1
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 18307 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 18206
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
insert sequence
Length = 1041
Score = 82.2 bits (173), Expect(2) = 3e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 634 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 756
Score = 51.5 bits (106), Expect(2) = 3e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / +1
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 844 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 945
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 882
Score = 82.2 bits (173), Expect(2) = 3e-023
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+ LW+ADDWAT+GGR+K DWS+APFVA FR ++AD CV
Sbjct: 571 RLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNYTADGCV 693
Score = 51.5 bits (106), Expect(2) = 3e-023
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / +1
Query: 235 RRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
+++R Q K+MIYNYC D +RFP G P EC L+*
Sbjct: 781 QQLREAQDKYMIYNYCNDPERFPDGYPKECGLQ* 882
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 76.7 bits (161), Expect(2) = 8e-023
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 7 YASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
Y+S+W A+DWATQGGRVKADWSKAPFVA++ G + + C
Sbjct: 10386925 YSSIWAAEDWATQGGRVKADWSKAPFVANYHGLNINVC 10387038
Score = 55.1 bits (114), Expect(2) = 8e-023
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +1 / +1
Query: 214 QLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
QLSD RMR VQ ++ IYNYC D KR+ VP EC L
Sbjct: 10387120 QLSDSELARMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 10387236
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 76.7 bits (161), Expect(2) = 8e-023
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1 / +3
Query: 7 YASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
Y+S+W A+DWATQGGRVKADWSKAPFVA++ G + + C
Sbjct: 4395981 YSSIWAAEDWATQGGRVKADWSKAPFVANYHGLNINVC 4396094
Score = 55.1 bits (114), Expect(2) = 8e-023
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +1 / +3
Query: 214 QLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
QLSD RMR VQ ++ IYNYC D KR+ VP EC L
Sbjct: 4396176 QLSDSELARMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 4396292
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0669G10
Length = 133372
Score = 76.7 bits (161), Expect(2) = 8e-023
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 7 YASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
Y+S+W A+DWATQGGRVKADWSKAPFVA++ G + + C
Sbjct: 6736 YSSIWAAEDWATQGGRVKADWSKAPFVANYHGLNINVC 6849
Score = 55.1 bits (114), Expect(2) = 8e-023
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +1 / +1
Query: 214 QLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
QLSD RMR VQ ++ IYNYC D KR+ VP EC L
Sbjct: 6931 QLSDSELARMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 7047
>gb|AACV01003896.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003896, whole
genome shotgun sequence
Length = 22607
Score = 76.7 bits (161), Expect(2) = 9e-023
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1 / -1
Query: 7 YASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
Y+S+W A+DWATQGGRVKADWSKAPFVA++ G + + C
Sbjct: 3818 YSSIWAAEDWATQGGRVKADWSKAPFVANYHGLNINVC 3705
Score = 55.1 bits (114), Expect(2) = 9e-023
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +1 / -1
Query: 214 QLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
QLSD RMR VQ ++ IYNYC D KR+ VP EC L
Sbjct: 3623 QLSDSELARMRKVQDEYRIYNYCVDPKRYNGSVPVECSL 3507
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
complete sequence
Length = 129037
Score = 68.9 bits (144), Expect(2) = 6e-022
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1 / -3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R++ASLWN D WAT+GG+VK +W+ APFVAS+R ++ AC
Sbjct: 30647 RVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 30528
Score = 60.2 bits (125), Expect(2) = 6e-022
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / -3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W ++QL R + W + +MIY+YC D RFPQG+PAEC L
Sbjct: 30428 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 30300
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
insert sequence
Length = 1234
Score = 68.9 bits (144), Expect(2) = 6e-022
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1 / +3
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R++ASLWN D WAT+GG+VK +W+ APFVAS+R ++ AC
Sbjct: 660 RVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 779
Score = 60.2 bits (125), Expect(2) = 6e-022
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W ++QL R + W + +MIY+YC D RFPQG+PAEC L
Sbjct: 879 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 1007
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 966
Score = 68.9 bits (144), Expect(2) = 6e-022
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R++ASLWN D WAT+GG+VK +W+ APFVAS+R ++ AC
Sbjct: 592 RVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSAC 711
Score = 60.2 bits (125), Expect(2) = 6e-022
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKL 330
W ++QL R + W + +MIY+YC D RFPQG+PAEC L
Sbjct: 811 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECSL 939
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 86.3 bits (182), Expect(2) = 7e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 1720991 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 1721110
Score = 42.3 bits (86), Expect(2) = 7e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 1721198 YRRLAWVRKTHTIYNYCDDRERYPAMSP 1721281
>ref|NT_107129.1| Oryza sativa (japonica cultivar-group)
Length = 234310
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 115463 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 115582
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 115670 YRRLAWVRKTHTIYNYCDDRERYPAMSP 115753
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
complete sequence
Length = 148829
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +2
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 115463 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 115582
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 115670 YRRLAWVRKTHTIYNYCDDRERYPAMSP 115753
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0007D07, complete sequence
Length = 133930
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 15082 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 15201
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 15289 YRRLAWVRKTHTIYNYCDDRERYPAMSP 15372
>gb|AACV01023313.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023313, whole
genome shotgun sequence
Length = 37775
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / -1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 17114 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 16995
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 16907 YRRLAWVRKTHTIYNYCDDRERYPAMSP 16824
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
insert sequence
Length = 1053
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 595 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 714
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 802 YRRLAWVRKTHTIYNYCDDRERYPAMSP 885
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
insert sequence
Length = 977
Score = 86.3 bits (182), Expect(2) = 8e-022
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
+LY+SLWNADDWAT+GGR K DWS+APFVAS+RGF D C
Sbjct: 598 KLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGC 717
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / +1
Query: 232 YRRMRWVQRKFMIYNYCADAKRFPQGVP 315
YRR+ WV++ IYNYC D +R+P P
Sbjct: 805 YRRLAWVRKTHTIYNYCDDRERYPAMSP 888
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1217_D10
Length = 103188
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+Y S+WNADDWAT GGRVK DWS+APF A FR + A AC
Sbjct: 98857 RVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 98976
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L ++++ V + IY+YC D KRF +P EC + *
Sbjct: 99022 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 99156
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 861
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADAC 120
R+Y S+WNADDWAT GGRVK DWS+APF A FR + A AC
Sbjct: 562 RVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIAC 681
Score = 49.2 bits (101), Expect(2) = 1e-021
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAECKLR* 336
W+NQ+L ++++ V + IY+YC D KRF +P EC + *
Sbjct: 727 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN* 861
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 68.4 bits (143), Expect(2) = 1e-021
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+A+LW+ WAT+ G VK DWS APFV S+RG+S +ACV
Sbjct: 62482 RLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 62604
Score = 59.3 bits (123), Expect(2) = 1e-021
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++L + W +R +M YNYCAD RFPQG PAEC
Sbjct: 62662 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 62784
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
endotransglycosylase-related protein 5, complete cds
Length = 1280
Score = 68.4 bits (143), Expect(2) = 2e-021
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 1 RLYASLWNADDWATQGGRVKADWSKAPFVASFRGFSADACV 123
RL+A+LW+ WAT+ G VK DWS APFV S+RG+S +ACV
Sbjct: 598 RLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 720
Score = 59.3 bits (123), Expect(2) = 2e-021
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 202 WWNQQLSDMSYRRMRWVQRKFMIYNYCADAKRFPQGVPAEC 324
W +++L + W +R +M YNYCAD RFPQG PAEC
Sbjct: 778 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 900
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,984,786,500
Number of Sequences: 438736
Number of extensions: 93022861
Number of successful extensions: 499558
Number of sequences better than 1.0e-020: 68
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 304802112720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)