TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696537.2.1
(592 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG450408.1|BG450408 NF014E01DT1F1006 Drought Medicago tr... 210 2e-053
gb|BG452084.1|BG452084 NF084E03LF1F1023 Developing leaf Med... 210 2e-053
gb|AJ621857.1|AJ621857 AJ621857 Medicago truncatula J5 root... 204 7e-052
gb|AW329404.2|AW329404 N200637e rootphos(-) Medicago trunca... 199 4e-050
gb|AW560247.1|AW560247 EST315295 DSIR Medicago truncatula c... 179 3e-044
gb|BG453707.1|BG453707 NF100E09LF1F1068 Developing leaf Med... 172 1e-043
gb|BE943506.1|BE943506 EST423085 MGHG Medicago truncatula c... 176 4e-043
gb|AL379975.1|AL379975 MtBB48E09F1 MtBB Medicago truncatula... 171 1e-041
gb|BQ157463.1|BQ157463 NF105B07IR1F1061 Irradiated Medicago... 171 1e-041
gb|CA989726.1|CA989726 EST643234 GLSD Medicago truncatula c... 171 1e-041
gb|CA991198.1|CA991198 EST644706 GESD Medicago truncatula c... 171 1e-041
gb|BG450835.1|BG450835 NF093G02DT1F1018 Drought Medicago tr... 168 8e-041
gb|BG648753.1|BG648753 EST510372 HOGA Medicago truncatula c... 163 2e-039
gb|BF521396.1|BF521396 EST458872 DSIL Medicago truncatula c... 160 2e-038
gb|CA920186.1|CA920186 EST637904 MTUS Medicago truncatula c... 159 4e-038
gb|DW016961.1|DW016961 EST1225922 MTY Medicago truncatula c... 153 3e-036
gb|BQ157180.1|BQ157180 NF102A04IR1F1033 Irradiated Medicago... 133 2e-035
gb|BQ124710.1|BQ124710 EST610286 GLSD Medicago truncatula c... 114 2e-034
gb|DW019196.1|DW019196 EST1228157 MTY Medicago truncatula c... 143 2e-033
gb|AC130799.19| Medicago truncatula clone mth2-34b13, compl... 75 1e-031
gb|BG646762.1|BG646762 EST508381 HOGA Medicago truncatula c... 135 7e-031
gb|BQ154515.1|BQ154515 NF071F06IR1F1059 Irradiated Medicago... 133 2e-030
gb|AC126007.16| Medicago truncatula clone mth2-11o4, comple... 78 3e-029
gb|CA990854.1|CA990854 EST644362 GESD Medicago truncatula c... 128 8e-029
gb|AL386313.1|AL386313 MtBC33H06R1 MtBC Medicago truncatula... 109 4e-023
gb|CA990864.1|CA990864 EST644372 GESD Medicago truncatula c... 106 2e-022
gb|CX519826.1|CX519826 s13dNF53C03VI018_443704 Virus-Infect... 106 2e-022
gb|CG969020.1|CG969020 MBECX18TR mth2 Medicago truncatula g... 59 8e-022
>gb|BG450408.1|BG450408 NF014E01DT1F1006 Drought Medicago truncatula cDNA clone NF014E01DT
5', mRNA sequence
Length = 594
Score = 210 bits (453), Expect = 2e-053
Identities = 74/114 (64%), Positives = 91/114 (79%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC EYLF+S + V+ CGHTIH CL EMR H QF+CP+C +S C+MS +W+K
Sbjct: 44 MHHDCPVCFEYLFESRNDVIVMPCGHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEK 223
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
LD +++A+PMP YQ KMVWILCNDCG TSNV+FH +A KC C+SYNTRQTRG
Sbjct: 224 LDMEISATPMPEPYQNKMVWILCNDCGKTSNVRFHFVAQKCLNCNSYNTRQTRG 385
Score = 135 bits (289), Expect = 7e-031
Identities = 62/114 (54%), Positives = 73/114 (64%)
Frame = +2 / -1
Query: 251 PLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFCQMSD 430
P VCRVL*EL H CA WN TL+V PQSL RI TI F* +GIG A S+F Q D
Sbjct: 384 PRVCRVL*ELQLRHFCATKWNRTLEVFPQSLHRIQTILF*YGSGIGVAEISMSNFSQTFD 205
Query: 431 MLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ Q D GH N C+LIS R W+VCP T+ +F++SN+YS QTGQ *CI
Sbjct: 204 ISQTDFEQRGHVNWKCSLISFRQLLWIVCPHGITMTSFLDSNKYSKQTGQS*CI 43
>gb|BG452084.1|BG452084 NF084E03LF1F1023 Developing leaf Medicago truncatula cDNA clone
NF084E03LF 5', mRNA sequence
Length = 618
Score = 210 bits (453), Expect = 2e-053
Identities = 74/114 (64%), Positives = 91/114 (79%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MHH+CPVC EYLF+S + V+ CGHTIH CL EMR H QF+CP+C +S C+MS +W+K
Sbjct: 87 MHHDCPVCFEYLFESRNDVIVMPCGHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEK 266
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
LD +++A+PMP YQ KMVWILCNDCG TSNV+FH +A KC C+SYNTRQTRG
Sbjct: 267 LDMEISATPMPEPYQNKMVWILCNDCGKTSNVRFHFVAQKCLNCNSYNTRQTRG 428
Score = 135 bits (289), Expect = 7e-031
Identities = 62/114 (54%), Positives = 73/114 (64%)
Frame = +2 / -3
Query: 251 PLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFCQMSD 430
P VCRVL*EL H CA WN TL+V PQSL RI TI F* +GIG A S+F Q D
Sbjct: 427 PRVCRVL*ELQLRHFCATKWNRTLEVFPQSLHRIQTILF*YGSGIGVAEISMSNFSQTFD 248
Query: 431 MLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ Q D GH N C+LIS R W+VCP T+ +F++SN+YS QTGQ *CI
Sbjct: 247 ISQTDFEQRGHVNWKCSLISFRQLLWIVCPHGITMTSFLDSNKYSKQTGQS*CI 86
>gb|AJ621857.1|AJ621857 AJ621857 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs376, mRNA sequence
Length = 591
Score = 204 bits (441), Expect = 7e-052
Identities = 72/114 (63%), Positives = 90/114 (78%)
Frame = -2 / -1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MH +CPVC EYLF+S+ +SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 426 MHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEK 247
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
+D ++AA+PMP Y K VWILCNDCG S+VQFH++A KC C SYNTRQTRG
Sbjct: 246 IDLELAATPMPEPYLNKTVWILCNDCGENSHVQFHLVAQKCLNCKSYNTRQTRG 85
Score = 112 bits (239), Expect = 5e-024
Identities = 56/114 (49%), Positives = 69/114 (60%)
Frame = +2 / +2
Query: 251 PLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFCQMSD 430
PLVC VL*+L H CA N T + +PQSLQRI T+ +GIG AA+ S F Q D
Sbjct: 86 PLVCLVL*DLQFKHFCATR*NWT*EFSPQSLQRIQTVLLRYGSGIGVAASSKSIFSQTFD 265
Query: 431 MLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ Q D H GH C+LIS R W+V PQ +T + +SN+YS QTGQ *CI
Sbjct: 266 ISQTDFEHKGHAY*KCSLISFRQLLWIVWPQCNTETSLTDSNKYSKQTGQS*CI 427
>gb|AW329404.2|AW329404 N200637e rootphos(-) Medicago truncatula cDNA clone MHRP-19G1, mRNA
sequence
Length = 590
Score = 199 bits (428), Expect = 4e-050
Identities = 70/114 (61%), Positives = 90/114 (78%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MH +CPVC EY+F+S K I V+ CGHTIH C+ EMR H +++CP+C +S C+MS +W++
Sbjct: 165 MHRDCPVCYEYIFESTKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWER 344
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
LD ++AA+PMP YQ KMVWILCNDCG T NV+FH +A KC C+SYNTRQTRG
Sbjct: 345 LDIEIAATPMPEQYQNKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTRG 506
Score = 119 bits (254), Expect = 4e-026
Identities = 60/114 (52%), Positives = 68/114 (59%)
Frame = +2 / -2
Query: 251 PLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFCQMSD 430
PLVCRVL*EL HL A WN TL V PQSL RI TI F +GIG AA S+ Q D
Sbjct: 505 PLVCRVL*ELQLRHLRATKWNRTLPVFPQSLHRIQTILFWYCSGIGVAAISMSNLSQTLD 326
Query: 431 MLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFIESNRYSMQTGQL*CI 592
+ Q D H GH C+LIS W+VCP T I+F++SN YS TGQ CI
Sbjct: 325 ISQNDFEHRGHVYR*CSLISSIQLLWIVCPHGITTISFVDSNIYS*HTGQSRCI 164
>gb|AW560247.1|AW560247 EST315295 DSIR Medicago truncatula cDNA clone pDSIR-26F15, mRNA
sequence
Length = 629
Score = 179 bits (386), Expect = 3e-044
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -2 / -3
Query: 558 LFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMP 379
LF+S+ +SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K+D ++AA+PMP
Sbjct: 627 LFESVNDVSVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEKIDLELAATPMP 448
Query: 378 AIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
Y K VWILCNDCG S+VQFH++A KC C SYNTRQTRG
Sbjct: 447 EPYLNKTVWILCNDCGENSHVQFHLVAQKCLNCKSYNTRQTRG 319
>gb|BG453707.1|BG453707 NF100E09LF1F1068 Developing leaf Medicago truncatula cDNA clone
NF100E09LF 5', mRNA sequence
Length = 644
Score = 172 bits (371), Expect(2) = 1e-043
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2 / +2
Query: 567 MEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAAS 388
++YLF+S+ +SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K+D ++AA+
Sbjct: 341 LQYLFESVNDVSVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEKIDLELAAT 520
Query: 387 PMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNT 265
PMP Y K VWILCNDCG S+VQFH++A KC C SYNT
Sbjct: 521 PMPEPYLNKTVWILCNDCGENSHVQFHLVAQKCLNCKSYNT 643
Score = 24.9 bits (48), Expect(2) = 1e-043
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 591 MHHNCPVCME 562
MH +CPVC E
Sbjct: 217 MHQDCPVCFE 246
>gb|BE943506.1|BE943506 EST423085 MGHG Medicago truncatula cDNA clone pMGHG-15P14, mRNA
sequence
Length = 459
Score = 176 bits (378), Expect = 4e-043
Identities = 63/100 (63%), Positives = 78/100 (78%)
Frame = -2 / +1
Query: 549 SMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIY 370
S + V+ CGHTIH CL EMR H QF+CP+C +S C+MS +W+KLD +++A+PMP Y
Sbjct: 1 SRNDVIVMPCGHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEKLDMEISATPMPEPY 180
Query: 369 QKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
Q KMVWILCNDCG TSNV+FH +A KC C+SYNTRQTRG
Sbjct: 181 QNKMVWILCNDCGKTSNVRFHFVAQKCLNCNSYNTRQTRG 300
Score = 109 bits (232), Expect = 5e-023
Identities = 51/99 (51%), Positives = 60/99 (60%)
Frame = +2 / -2
Query: 251 PLVCRVL*ELHPGHLCAKMWNCTLDVTPQSLQRIHTIFF**IAGIGDAATC*SSFCQMSD 430
P VCRVL*EL H CA WN TL+V PQSL RI TI F* +GIG A S+F Q D
Sbjct: 299 PRVCRVL*ELQLRHFCATKWNRTLEVFPQSLHRIQTILF*YGSGIGVAEISMSNFSQTFD 120
Query: 431 MLQADLRHTGHENCWCALIS*RHSRWMVCPQWSTLIAFI 547
+ Q D GH N C+LIS R W+VCP T+ +F+
Sbjct: 119 ISQTDFEQRGHVNWKCSLISFRQLLWIVCPHGITMTSFL 3
>gb|AL379975.1|AL379975 MtBB48E09F1 MtBB Medicago truncatula cDNA clone MtBB48E09 T3, mRNA
sequence
Length = 485
Score = 171 bits (367), Expect = 1e-041
Identities = 57/110 (51%), Positives = 80/110 (72%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 134 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 313
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC CSSYNTR
Sbjct: 314 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKCGHCSSYNTR 463
>gb|BQ157463.1|BQ157463 NF105B07IR1F1061 Irradiated Medicago truncatula cDNA clone
NF105B07IR 5', mRNA sequence
Length = 674
Score = 171 bits (367), Expect = 1e-041
Identities = 57/110 (51%), Positives = 80/110 (72%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 152 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 331
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC CSSYNTR
Sbjct: 332 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKCGHCSSYNTR 481
>gb|CA989726.1|CA989726 EST643234 GLSD Medicago truncatula cDNA clone pGLSD-42H1, mRNA
sequence
Length = 583
Score = 171 bits (367), Expect = 1e-041
Identities = 57/110 (51%), Positives = 80/110 (72%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 57 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 236
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC CSSYNTR
Sbjct: 237 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKCGHCSSYNTR 386
>gb|CA991198.1|CA991198 EST644706 GESD Medicago truncatula cDNA clone GESD-32O23, mRNA
sequence
Length = 839
Score = 171 bits (367), Expect = 1e-041
Identities = 57/110 (51%), Positives = 80/110 (72%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 444 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 623
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTR 262
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC CSSYNTR
Sbjct: 624 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKCGHCSSYNTR 773
>gb|BG450835.1|BG450835 NF093G02DT1F1018 Drought Medicago truncatula cDNA clone NF093G02DT
5', mRNA sequence
Length = 668
Score = 168 bits (361), Expect = 8e-041
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -2 / -2
Query: 534 SVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMV 355
SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K+D ++A +PMP Y K V
Sbjct: 667 SVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEKIDLELAXTPMPEPYXNKTV 488
Query: 354 WILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
WILCNDCG S+VQFH++A KC C YNTRQTRG
Sbjct: 487 WILCNDCGENSHVQFHLVAQKCLNCKXYNTRQTRG 383
>gb|BG648753.1|BG648753 EST510372 HOGA Medicago truncatula cDNA clone pHOGA-23B6 5' end,
mRNA sequence
Length = 797
Score = 163 bits (351), Expect = 2e-039
Identities = 54/107 (50%), Positives = 77/107 (71%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 477 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 656
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSY 271
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC CSSY
Sbjct: 657 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKCGHCSSY 797
>gb|BF521396.1|BF521396 EST458872 DSIL Medicago truncatula cDNA clone pDSIL-43C16, mRNA
sequence
Length = 710
Score = 160 bits (343), Expect = 2e-038
Identities = 55/91 (60%), Positives = 71/91 (78%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MH +CPVC EYLF+S+ +SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 437 MHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEK 616
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSN 319
+D ++AA+PMP Y K VWILCNDCG S+
Sbjct: 617 IDLELAATPMPEPYLNKTVWILCNDCGENSH 709
>gb|CA920186.1|CA920186 EST637904 MTUS Medicago truncatula cDNA clone MTUS-24F4, mRNA
sequence
Length = 640
Score = 159 bits (341), Expect = 4e-038
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = -2 / -1
Query: 531 VLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMVW 352
V+ CGHTIH C+ EMR H +++CP+C +S C+MS + ++LD ++AA+PMP YQ KMVW
Sbjct: 625 VMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVRERLDIEIAATPMPEQYQNKMVW 446
Query: 351 ILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
ILCNDCG T NV+FH +A KC C+SYNTRQTRG
Sbjct: 445 ILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTRG 344
>gb|DW016961.1|DW016961 EST1225922 MTY Medicago truncatula cDNA clone MTYAN76, mRNA
sequence
Length = 845
Score = 153 bits (328), Expect = 3e-036
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C S +MS W++
Sbjct: 543 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSMSVIDMSTAWKR 722
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKC 289
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI+ HKC
Sbjct: 723 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHIIGHKC 845
>gb|BQ157180.1|BQ157180 NF102A04IR1F1033 Irradiated Medicago truncatula cDNA clone
NF102A04IR 5', mRNA sequence
Length = 678
Score = 133 bits (286), Expect(2) = 2e-035
Identities = 44/92 (47%), Positives = 65/92 (70%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 291 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 470
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNV 316
+D+++ A+ MP Y+ VWILCNDC T+ V
Sbjct: 471 IDEEIEATVMPDDYRNXKVWILCNDCNDTTEV 566
Score = 36.3 bits (73), Expect(2) = 2e-035
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / +1
Query: 312 FHILAHKCPGCSSYNT 265
FHI+ HKC CSSYNT
Sbjct: 571 FHIIGHKCGHCSSYNT 618
>gb|BQ124710.1|BQ124710 EST610286 GLSD Medicago truncatula cDNA clone pGLSD-37C17, mRNA
sequence
Length = 699
Score = 114 bits (243), Expect(2) = 2e-034
Identities = 38/61 (62%), Positives = 49/61 (80%)
Frame = -2 / +1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MH +CPVC EYLF+S+ +SVLHCGHTIH CL EMR H Q++CP+C +S C+MS +W+K
Sbjct: 430 MHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQYACPLCSKSVCDMSKVWEK 609
Query: 411 L 409
L
Sbjct: 610 L 612
Score = 52.4 bits (108), Expect(2) = 2e-034
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -2 / +3
Query: 414 KLDQQVAASPMPAIYQKKMVWILCNDCGVTS 322
K+D ++AA+PMP Y K VWILCNDCG S
Sbjct: 606 KIDLELAATPMPEPYLNKTVWILCNDCGENS 698
>gb|DW019196.1|DW019196 EST1228157 MTY Medicago truncatula cDNA clone MTYBG09, mRNA
sequence
Length = 832
Score = 143 bits (307), Expect = 2e-033
Identities = 47/96 (48%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 543 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 722
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHI 304
+D+++ A+ MP Y+ + VWILCNDC T+ V FHI
Sbjct: 723 IDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHI 830
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence
Length = 133305
Score = 75.3 bits (158), Expect(3) = 1e-031
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -2 / -1
Query: 357 VWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
VWILCNDCG S+VQFH++A KC C SYNTRQTRG
Sbjct: 110907 VWILCNDCGENSHVQFHLVAQKCLNCISYNTRQTRG 110800
Score = 58.8 bits (122), Expect(3) = 1e-031
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 567 MEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQ 469
++YLF+S+ +SVLHCGHTIH CL EMR H Q
Sbjct: 111624 LQYLFESVNDVSVLHCGHTIHKSCLNEMREHFQ 111526
Score = 58.3 bits (121), Expect(3) = 1e-031
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = -2 / -2
Query: 471 QFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMVWI 349
+++CP+C +S C+MS +W+K+D ++AA+PMP Y K V I
Sbjct: 111437 RYACPLCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVSI 111315
>gb|BG646762.1|BG646762 EST508381 HOGA Medicago truncatula cDNA clone pHOGA-9B12 5' end,
mRNA sequence
Length = 669
Score = 135 bits (289), Expect = 7e-031
Identities = 47/77 (61%), Positives = 62/77 (80%)
Frame = -2 / +1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
MH NCPVC E+LFD+ K I+VL CGHTIHL C+ EM+ H Q+SCPVC +S C+MS +W+K
Sbjct: 439 MHQNCPVCFEFLFDTTKDITVLPCGHTIHLGCVREMQQHLQYSCPVCSKSFCDMSRVWEK 618
Query: 411 LDQQVAASPMPAIYQKK 361
+D++VA+ PMP +YQ K
Sbjct: 619 MDEEVASMPMPEMYQNK 669
>gb|BQ154515.1|BQ154515 NF071F06IR1F1059 Irradiated Medicago truncatula cDNA clone
NF071F06IR 5', mRNA sequence
Length = 615
Score = 133 bits (285), Expect = 2e-030
Identities = 43/90 (47%), Positives = 65/90 (72%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 324 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 503
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDCGVTS 322
+D+++ A+ MP Y+ + VWILCNDC T+
Sbjct: 504 IDEEIEATVMPDDYRNRKVWILCNDCNDTT 593
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence
Length = 106747
Score = 77.6 bits (163), Expect(4) = 3e-029
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2 / +3
Query: 357 VWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAA 238
VWILCNDCGV S+VQFHI+AHKC C+SYNTRQ + P++
Sbjct: 91776 VWILCNDCGVNSHVQFHIVAHKCLSCNSYNTRQIQIVPSS 91895
Score = 56.1 bits (116), Expect(4) = 3e-029
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = -2 / +1
Query: 567 MEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQ 469
++YLFD+++ ISVL CGHTIH EC+ EM H +
Sbjct: 89863 LQYLFDTLREISVLTCGHTIHFECVKEMEKHHR 89961
Score = 44.1 bits (90), Expect(4) = 3e-029
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -2 / +1
Query: 471 QFSCPVCLRSACNMSDIWQKLDQQV 397
++SCPVC +S C+MS +W+ LD+ V
Sbjct: 90052 RYSCPVCSKSICDMSSVWKNLDEMV 90126
Score = 30.4 bits (60), Expect(4) = 3e-029
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 591 MHHNCPVCME 562
MHHNCP+C E
Sbjct: 89734 MHHNCPICFE 89763
>gb|CA990854.1|CA990854 EST644362 GESD Medicago truncatula cDNA clone GESD-31G21, mRNA
sequence
Length = 707
Score = 128 bits (274), Expect = 8e-029
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = -2 / +2
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 443 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 622
Query: 411 LDQQVAASPMPAIYQKKMVWILCNDC 334
+D+++ A+ MP Y+ + VWILC DC
Sbjct: 623 IDEEIEATVMPDDYRNRKVWILCYDC 700
>gb|AL386313.1|AL386313 MtBC33H06R1 MtBC Medicago truncatula cDNA clone MtBC33H06 T7, mRNA
sequence
Length = 534
Score = 109 bits (233), Expect = 4e-023
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = -2 / +1
Query: 429 SDIWQKLDQQVAASPMPAIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRG 250
S +W+KLD +++A+PMP YQ MVWILCNDCG TSNV+FH +A KC C+SYNTR TRG
Sbjct: 1 SKVWEKLDMEISATPMPEPYQN*MVWILCNDCGKTSNVRFHFVAQKCLNCNSYNTRHTRG 180
>gb|CA990864.1|CA990864 EST644372 GESD Medicago truncatula cDNA clone GESD-31I21, mRNA
sequence
Length = 455
Score = 106 bits (227), Expect = 2e-022
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = -2 / +1
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 232 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 411
Query: 411 LDQQVAASPMPAIY 370
+D+++ A+ MP Y
Sbjct: 412 IDEEIEATVMPDDY 453
>gb|CX519826.1|CX519826 s13dNF53C03VI018_443704 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 554
Score = 106 bits (227), Expect = 2e-022
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = -2 / +3
Query: 591 MHHNCPVCMEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQK 412
M H+CP+C EYLFDS+K +V+ CGHT+H EC +EM ++ CP+C +S +MS W++
Sbjct: 333 MRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEMIKRDKYCCPICSKSVIDMSTAWKR 512
Query: 411 LDQQVAASPMPAIY 370
+D+++ A+ MP Y
Sbjct: 513 IDEEIEATVMPDDY 554
>gb|CG969020.1|CG969020 MBECX18TR mth2 Medicago truncatula genomic clone 29D12, DNA
sequence
Length = 907
Score = 58.8 bits (122), Expect(3) = 8e-022
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 567 MEYLFDSMKAISVLHCGHTIHLECLYEMRAHQQ 469
++YLF+S+ +SVLHCGHTIH CL EMR H Q
Sbjct: 257 LQYLFESVNDVSVLHCGHTIHKSCLNEMREHFQ 355
Score = 58.3 bits (121), Expect(3) = 8e-022
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = -2 / +3
Query: 471 QFSCPVCLRSACNMSDIWQKLDQQVAASPMPAIYQKKMVWI 349
+++CP+C +S C+MS +W+K+D ++AA+PMP Y K V I
Sbjct: 444 RYACPLCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVSI 566
Score = 24.9 bits (48), Expect(3) = 8e-022
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 591 MHHNCPVCME 562
MH +CPVC E
Sbjct: 133 MHQDCPVCFE 162
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 682,575,499
Number of Sequences: 392609
Number of extensions: 10106142
Number of successful extensions: 59986
Number of sequences better than 1.0e-020: 33
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 18080355722
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)