TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= F5H
(1360 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, sal... 235 5e-075
gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green... 201 6e-051
gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA li... 187 1e-046
gb|BI951511.1|BI951511 HVSMEm0001D04f Hordeum vulgare green... 122 8e-045
gb|BE559347.1|BE559347 HV_CEb0024D15f Hordeum vulgare seedl... 179 4e-044
gb|BQ468032.1|BQ468032 HR01L12r HR Hordeum vulgare subsp. v... 176 2e-043
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 164 9e-040
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 81 7e-039
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 159 4e-038
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 159 4e-038
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 159 4e-038
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 159 4e-038
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 159 4e-038
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 159 4e-038
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 155 5e-037
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 152 4e-036
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 152 4e-036
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 152 4e-036
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 142 4e-036
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 107 4e-036
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 87 9e-036
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 80 2e-034
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 80 3e-034
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 121 3e-034
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 74 5e-034
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 58 2e-033
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 90 3e-033
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 108 3e-033
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 142 5e-033
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 142 5e-033
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 142 5e-033
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 142 5e-033
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 142 5e-033
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 131 1e-032
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 131 1e-032
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 131 1e-032
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 131 1e-032
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 131 1e-032
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 131 1e-032
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 128 5e-032
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 126 3e-031
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 68 9e-031
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 134 1e-030
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 81 2e-030
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 99 3e-030
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 132 6e-030
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 104 3e-029
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 91 5e-029
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 88 9e-029
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 87 9e-029
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 87 9e-029
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 87 9e-029
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 87 9e-029
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 87 9e-029
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 87 9e-029
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 87 9e-029
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 87 9e-029
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 87 9e-029
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 87 9e-029
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 87 9e-029
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 87 9e-029
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 87 9e-029
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 87 9e-029
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 79 1e-028
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 105 1e-028
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 87 2e-028
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 61 3e-028
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 70 3e-028
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 100 6e-028
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 87 6e-028
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 87 6e-028
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 87 6e-028
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 85 6e-028
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 112 8e-028
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 123 2e-027
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 123 2e-027
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 81 4e-027
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 87 5e-027
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 109 7e-027
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 87 7e-027
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 106 3e-026
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 118 6e-026
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 108 6e-026
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 54 7e-026
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 118 8e-026
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 89 9e-026
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 72 1e-025
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 87 2e-025
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 85 1e-024
gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA li... 87 1e-024
gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. v... 87 1e-024
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 94 1e-024
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 75 2e-024
gb|BJ460252.1|BJ460252 BJ460252 K. Sato unpublished cDNA li... 100 4e-024
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 75 7e-024
gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. v... 87 9e-024
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 59 1e-023
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 85 1e-023
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 110 2e-023
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 61 2e-023
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 78 4e-023
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 106 2e-022
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 58 5e-022
gb|BE060200.3|BE060200 HVSMEg0011E01f Hordeum vulgare pre-a... 105 8e-022
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 61 1e-021
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 74 1e-021
gb|BF618482.2|BF618482 HVSMEc0005N02f Hordeum vulgare seedl... 82 1e-021
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 81 2e-021
gb|BE214174.2|BE214174 HV_CEb0002I14f Hordeum vulgare seedl... 80 3e-021
gb|BE213800.1|BE213800 HV_CEb0001F01f Hordeum vulgare seedl... 78 4e-021
gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA li... 76 4e-021
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 102 4e-021
gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedl... 81 7e-021
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 69 8e-021
gb|AV836988.1|AV836988 AV836988 K. Sato unpublished cDNA li... 100 3e-020
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 79 4e-020
gb|BF259325.3|BF259325 HVSMEf0019E17f Hordeum vulgare seedl... 43 1e-019
gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA li... 91 1e-019
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 45 1e-019
gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedl... 97 2e-019
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 69 2e-019
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 67 3e-019
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 67 4e-019
gb|BQ662325.1|BQ662325 HS01N10w HS Hordeum vulgare subsp. v... 65 4e-019
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 57 5e-019
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 71 5e-019
gb|AU252319.1|AU252319 AU252319 salt-stressed barley root c... 80 7e-019
gb|BE196643.3|BE196643 HVSMEh0092N21f Hordeum vulgare 5-45 ... 95 1e-018
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 57 2e-018
gb|BE421487.1|BE421487 HWM009.G12 ITEC HWM Barley Leaf Libr... 94 2e-018
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 58 3e-018
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 55 4e-018
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 46 7e-018
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 75 9e-018
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 61 2e-017
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 66 2e-017
gb|AV928880.1|AV928880 AV928880 K. Sato unpublished cDNA li... 90 3e-017
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 90 3e-017
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 65 6e-017
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 51 9e-017
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 45 1e-016
gb|BU989362.1|BU989362 HF21I13r HF Hordeum vulgare subsp. v... 44 1e-016
gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. v... 66 1e-016
gb|AV915951.1|AV915951 AV915951 K. Sato unpublished cDNA li... 87 2e-016
gb|AJ434819.1|AJ434819 AJ434819 S00002 Hordeum vulgare subs... 66 2e-016
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 45 2e-016
gb|BJ467028.1|BJ467028 BJ467028 K. Sato unpublished cDNA li... 87 3e-016
gb|BI958347.1|BI958347 HVSMEn0014I13f Hordeum vulgare rachi... 86 4e-016
gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA li... 86 4e-016
gb|CA015964.1|CA015964 HV11L11u HV Hordeum vulgare subsp. v... 86 5e-016
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 66 5e-016
gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA li... 57 1e-015
gb|BF257896.3|BF257896 HVSMEf0014C17f Hordeum vulgare seedl... 54 1e-015
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 51 2e-015
gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. v... 51 2e-015
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 54 2e-014
gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. v... 70 2e-014
gb|BG299631.1|BG299631 HVSMEa0021C22f Hordeum vulgare seedl... 58 2e-014
gb|AU252310.1|AU252310 AU252310 salt-stressed barley root c... 55 3e-014
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 54 3e-014
gb|AL505691.1|AL505691 AL505691 Hordeum vulgare Barke roots... 80 3e-014
gb|BF630974.2|BF630974 HVSMEb0014J14f Hordeum vulgare seedl... 80 3e-014
gb|CA016358.1|CA016358 HV09D15u HV Hordeum vulgare subsp. v... 80 3e-014
gb|AL504503.1|AL504503 AL504503 Hordeum vulgare Barke roots... 54 5e-014
gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. v... 69 5e-014
gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA li... 69 5e-014
gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. v... 68 7e-014
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 79 8e-014
gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedl... 65 1e-013
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 49 1e-013
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 49 1e-013
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 49 1e-013
gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA li... 49 1e-013
gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA li... 49 1e-013
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 49 1e-013
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 49 1e-013
gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA li... 58 2e-013
gb|BE411284.1|BE411284 ISC004.A02F990510 ITEC ISC Barley Le... 68 3e-013
gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green... 46 7e-013
gb|BF630963.2|BF630963 HVSMEb0014J02f Hordeum vulgare seedl... 75 1e-012
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 47 1e-012
gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike... 63 2e-012
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 43 4e-012
gb|CB881714.1|CB881714 HM10K16w HM Hordeum vulgare subsp. v... 73 5e-012
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 44 7e-012
gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subs... 46 1e-011
gb|BQ662532.1|BQ662532 HS02N10u HS Hordeum vulgare subsp. v... 51 2e-011
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 48 2e-011
gb|BE421103.1|BE421103 HWM005.G12 ITEC HWM Barley Leaf Libr... 59 5e-011
gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots... 69 6e-011
gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots... 69 6e-011
gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedl... 69 6e-011
gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA li... 69 6e-011
gb|BE519842.2|BE519842 HV_CEb0021G19f Hordeum vulgare seedl... 45 1e-010
gb|CA016384.1|CA016384 HV09C09u HV Hordeum vulgare subsp. v... 45 1e-010
gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. v... 68 2e-010
gb|BE421270.1|BE421270 HWM007.E11 ITEC HWM Barley Leaf Libr... 59 2e-010
gb|BE421429.1|BE421429 HWM009.C02 ITEC HWM Barley Leaf Libr... 59 2e-010
gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. v... 48 2e-010
gb|BE421330.1|BE421330 HWM008.B11 ITEC HWM Barley Leaf Libr... 59 3e-010
gb|BE421672.1|BE421672 HWM012cF.07r ITEC HWM Barley Leaf Li... 59 3e-010
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 47 4e-010
gb|BF259330.2|BF259330 HVSMEf0019E22f Hordeum vulgare seedl... 66 6e-010
gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedl... 66 6e-010
gb|BE427743.1|BE427743 PSR6690 ITEC PSR Barley Inflorescenc... 59 6e-010
gb|BE427871.1|BE427871 PSR6875 ITEC PSR Barley Inflorescenc... 59 7e-010
gb|BE427848.1|BE427848 PSR6846 ITEC PSR Barley Inflorescenc... 59 7e-010
gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hyd... 47 8e-010
gb|AL511075.1|AL511075 AL511075 Hordeum vulgare Barke devel... 46 8e-010
gb|BI958140.1|BI958140 HVSMEn0013J13f Hordeum vulgare rachi... 50 9e-010
gb|BE427858.1|BE427858 PSR6860 ITEC PSR Barley Inflorescenc... 59 1e-009
gb|BU976859.1|BU976859 HA10H02r HA Hordeum vulgare subsp. v... 65 1e-009
gb|BU976860.1|BU976860 HA10H02u HA Hordeum vulgare subsp. v... 65 1e-009
gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, n... 64 1e-009
gb|CB875167.1|CB875167 HX07H18w HX Hordeum vulgare subsp. v... 64 1e-009
gb|AV919038.1|AV919038 AV919038 K. Sato unpublished cDNA li... 64 2e-009
gb|BE421637.1|BE421637 HWM012cB.11r ITEC HWM Barley Leaf Li... 59 2e-009
gb|BE421019.1|BE421019 HWM004.H12 ITEC HWM Barley Leaf Libr... 59 2e-009
gb|BG416626.2|BG416626 HVSMEk0013K23f Hordeum vulgare testa... 45 3e-009
gb|BE421903.1|BE421903 HWM016cC.09r ITEC HWM Barley Leaf Li... 59 3e-009
gb|BJ474172.1|BJ474172 BJ474172 K. Sato unpublished cDNA li... 44 4e-009
gb|AV928039.1|AV928039 AV928039 K. Sato unpublished cDNA li... 63 4e-009
gb|AV935809.1|AV935809 AV935809 K. Sato unpublished cDNA li... 44 4e-009
gb|BE421962.1|BE421962 HWM017cD.04r ITEC HWM Barley Leaf Li... 59 5e-009
gb|BQ471837.1|BQ471837 HV03K07r HV Hordeum vulgare subsp. v... 45 5e-009
gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene o... 42 5e-009
gb|CV063618.1|CV063618 BNEL91c9 Barley EST endosperm librar... 42 5e-009
gb|CV058216.1|CV058216 BNEL35f11 Barley EST endosperm libra... 42 5e-009
gb|AV921067.1|AV921067 AV921067 K. Sato unpublished cDNA li... 62 5e-009
gb|BE427769.1|BE427769 PSR6728 ITEC PSR Barley Inflorescenc... 59 5e-009
gb|BE421425.1|BE421425 HWM009.B10 ITEC HWM Barley Leaf Libr... 59 6e-009
gb|BE427878.1|BE427878 PSR6884 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|BE427893.1|BE427893 PSR7387 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|BE427874.1|BE427874 PSR6878 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|CB858927.1|CB858927 HI08L23w HI Hordeum vulgare subsp. v... 45 6e-009
gb|BE427852.1|BE427852 PSR6853 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|BE427847.1|BE427847 PSR6845 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|BE427879.1|BE427879 PSR6885 ITEC PSR Barley Inflorescenc... 59 6e-009
gb|BE421536.1|BE421536 HWM010.D01 ITEC HWM Barley Leaf Libr... 59 7e-009
gb|BE421519.1|BE421519 HWM010.B08 ITEC HWM Barley Leaf Libr... 59 7e-009
gb|BE421886.1|BE421886 HWM016cA.12r ITEC HWM Barley Leaf Li... 59 7e-009
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 43 7e-009
gb|BE421278.1|BE421278 HWM007.F07 ITEC HWM Barley Leaf Libr... 58 8e-009
gb|BE421037.1|BE421037 HWM005.B06 ITEC HWM Barley Leaf Libr... 59 8e-009
gb|BE421783.1|BE421783 HWM014cE.02r ITEC HWM Barley Leaf Li... 58 9e-009
gb|BE421572.1|BE421572 HWM011cC.10r ITEC HWM Barley Leaf Li... 59 9e-009
gb|BE421539.1|BE421539 HWM010.D04 ITEC HWM Barley Leaf Libr... 59 9e-009
gb|BE421211.1|BE421211 HWM006.H12 ITEC HWM Barley Leaf Libr... 59 1e-008
gb|BE421526.1|BE421526 HWM010.C03 ITEC HWM Barley Leaf Libr... 59 1e-008
gb|BE420704.1|BE420704 HWM001.F09 ITEC HWM Barley Leaf Libr... 59 1e-008
gb|BE421802.1|BE421802 HWM014cG.10r ITEC HWM Barley Leaf Li... 59 1e-008
gb|CA013589.1|CA013589 HT08O23r HT Hordeum vulgare subsp. v... 61 1e-008
gb|BU995653.1|BU995653 HM10O21r HM Hordeum vulgare subsp. v... 49 1e-008
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 61 1e-008
gb|BE421066.1|BE421066 HWM005.D11 ITEC HWM Barley Leaf Libr... 59 1e-008
gb|BE421132.1|BE421132 HWM006.B05 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE422008.1|BE422008 HWM018cH.02r ITEC HWM Barley Leaf Li... 59 2e-008
gb|BE421885.1|BE421885 HWM016cA.11r ITEC HWM Barley Leaf Li... 58 2e-008
gb|BE421361.1|BE421361 HWM008.E06 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE420924.1|BE420924 HWM004.A01 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE420754.1|BE420754 HWM002.B11 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE420845.1|BE420845 HWM003.B06 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE421663.1|BE421663 HWM012cE.07r ITEC HWM Barley Leaf Li... 59 2e-008
gb|BE421314.1|BE421314 HWM008.A07 ITEC HWM Barley Leaf Libr... 59 2e-008
gb|BE421616.1|BE421616 HWM011cH.02r ITEC HWM Barley Leaf Li... 59 2e-008
gb|BE421897.1|BE421897 HWM016cC.01r ITEC HWM Barley Leaf Li... 59 2e-008
gb|BE422096.1|BE422096 HWM019cH.10r ITEC HWM Barley Leaf Li... 59 3e-008
gb|BE421911.1|BE421911 HWM016cD.09r ITEC HWM Barley Leaf Li... 59 3e-008
gb|BE422145.1|BE422145 HWM020cF.08r ITEC HWM Barley Leaf Li... 59 3e-008
gb|AJ460907.1|AJ460907 AJ460907 S00002 Hordeum vulgare subs... 60 4e-008
gb|BE422431.1|BE422431 HWM024cG.09r ITEC HWM Barley Leaf Li... 59 4e-008
gb|BE421489.1|BE421489 HWM009.H02 ITEC HWM Barley Leaf Libr... 59 4e-008
gb|BE421650.1|BE421650 HWM012cD.04r ITEC HWM Barley Leaf Li... 59 4e-008
gb|BE421482.1|BE421482 HWM009.G07 ITEC HWM Barley Leaf Libr... 59 4e-008
gb|BE421120.1|BE421120 HWM006.A05 ITEC HWM Barley Leaf Libr... 59 4e-008
gb|BE421095.1|BE421095 HWM005.G04 ITEC HWM Barley Leaf Libr... 59 4e-008
gb|BE421434.1|BE421434 HWM009.C07 ITEC HWM Barley Leaf Libr... 57 4e-008
gb|BE421151.1|BE421151 HWM006.C12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|AU089860.1|AU089860 AU089860 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU089874.1|AU089874 AU089874 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU089875.1|AU089875 AU089875 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU089879.1|AU089879 AU089879 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU089930.1|AU089930 AU089930 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU089963.1|AU089963 AU089963 Hordeum vulgare subsp. vulg... 59 5e-008
gb|AU090033.1|AU090033 AU090033 Hordeum vulgare subsp. vulg... 59 5e-008
gb|BE420565.1|BE420565 HWM000.C02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420599.1|BE420599 HWM000.E12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420605.1|BE420605 HWM000.F06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420614.1|BE420614 HWM000.G03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420619.1|BE420619 HWM000.G08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420622.1|BE420622 HWM000.G11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420623.1|BE420623 HWM000.G12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420626.1|BE420626 HWM000.H03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420631.1|BE420631 HWM000.H08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420632.1|BE420632 HWM000.H09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420636.1|BE420636 HWM001.A01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420644.1|BE420644 HWM001.A09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420647.1|BE420647 HWM001.A12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420649.1|BE420649 HWM001.B02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420662.1|BE420662 HWM001.C03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420663.1|BE420663 HWM001.C04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420664.1|BE420664 HWM001.C05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420666.1|BE420666 HWM001.C07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420667.1|BE420667 HWM001.C08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420673.1|BE420673 HWM001.D02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420681.1|BE420681 HWM001.D10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420684.1|BE420684 HWM001.E01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420696.1|BE420696 HWM001.F01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420697.1|BE420697 HWM001.F02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420699.1|BE420699 HWM001.F04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420701.1|BE420701 HWM001.F06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420707.1|BE420707 HWM001.F12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420708.1|BE420708 HWM001.G01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420713.1|BE420713 HWM001.G06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420724.1|BE420724 HWM001.H05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420748.1|BE420748 HWM002.B05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420749.1|BE420749 HWM002.B06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420750.1|BE420750 HWM002.B07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420752.1|BE420752 HWM002.B09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420756.1|BE420756 HWM002.C01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420757.1|BE420757 HWM002.C02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420758.1|BE420758 HWM002.C03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420759.1|BE420759 HWM002.C04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420767.1|BE420767 HWM002.C12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420769.1|BE420769 HWM002.D02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420770.1|BE420770 HWM002.D03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420773.1|BE420773 HWM002.D06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420780.1|BE420780 HWM002.E01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420781.1|BE420781 HWM002.E02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420782.1|BE420782 HWM002.E03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420787.1|BE420787 HWM002.E08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420789.1|BE420789 HWM002.E10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420791.1|BE420791 HWM002.E12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420792.1|BE420792 HWM002.F01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420793.1|BE420793 HWM002.F02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420794.1|BE420794 HWM002.F03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420795.1|BE420795 HWM002.F04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420796.1|BE420796 HWM002.F05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420797.1|BE420797 HWM002.F06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420798.1|BE420798 HWM002.F07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420799.1|BE420799 HWM002.F08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420800.1|BE420800 HWM002.F09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420801.1|BE420801 HWM002.F10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420802.1|BE420802 HWM002.F11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420804.1|BE420804 HWM002.G01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420808.1|BE420808 HWM002.G05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420809.1|BE420809 HWM002.G06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420811.1|BE420811 HWM002.G08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420812.1|BE420812 HWM002.G09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420813.1|BE420813 HWM002.G10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420814.1|BE420814 HWM002.G11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420827.1|BE420827 HWM002.H12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420828.1|BE420828 HWM003.A01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420829.1|BE420829 HWM003.A02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420833.1|BE420833 HWM003.A06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420836.1|BE420836 HWM003.A09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420838.1|BE420838 HWM003.A11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420839.1|BE420839 HWM003.A12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420846.1|BE420846 HWM003.B07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420847.1|BE420847 HWM003.B08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420848.1|BE420848 HWM003.B09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420849.1|BE420849 HWM003.B10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420850.1|BE420850 HWM003.B11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420852.1|BE420852 HWM003.C01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420854.1|BE420854 HWM003.C03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420901.1|BE420901 HWM003.G02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420903.1|BE420903 HWM003.G04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420904.1|BE420904 HWM003.G05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420905.1|BE420905 HWM003.G06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420907.1|BE420907 HWM003.G08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420909.1|BE420909 HWM003.G10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420914.1|BE420914 HWM003.H03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420917.1|BE420917 HWM003.H06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420918.1|BE420918 HWM003.H07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420921.1|BE420921 HWM003.H10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420922.1|BE420922 HWM003.H11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420923.1|BE420923 HWM003.H12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420928.1|BE420928 HWM004.A05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420931.1|BE420931 HWM004.A08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420933.1|BE420933 HWM004.A10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420934.1|BE420934 HWM004.A11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420940.1|BE420940 HWM004.B05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420945.1|BE420945 HWM004.B10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420946.1|BE420946 HWM004.B11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420949.1|BE420949 HWM004.C02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420953.1|BE420953 HWM004.C06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420954.1|BE420954 HWM004.C07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420955.1|BE420955 HWM004.C08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420957.1|BE420957 HWM004.C10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420958.1|BE420958 HWM004.C11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420959.1|BE420959 HWM004.C12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420960.1|BE420960 HWM004.D01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420966.1|BE420966 HWM004.D07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420969.1|BE420969 HWM004.D10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420974.1|BE420974 HWM004.E03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420990.1|BE420990 HWM004.F07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421006.1|BE421006 HWM004.G11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421008.1|BE421008 HWM004.H01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421009.1|BE421009 HWM004.H02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421011.1|BE421011 HWM004.H04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421012.1|BE421012 HWM004.H05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421018.1|BE421018 HWM004.H11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421022.1|BE421022 HWM005.A03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421027.1|BE421027 HWM005.A08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421028.1|BE421028 HWM005.A09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421031.1|BE421031 HWM005.A12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421035.1|BE421035 HWM005.B04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421045.1|BE421045 HWM005.C02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421051.1|BE421051 HWM005.C08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421053.1|BE421053 HWM005.C10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421054.1|BE421054 HWM005.C11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421056.1|BE421056 HWM005.D01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421064.1|BE421064 HWM005.D09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421065.1|BE421065 HWM005.D10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421067.1|BE421067 HWM005.D12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421068.1|BE421068 HWM005.E01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421069.1|BE421069 HWM005.E02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421072.1|BE421072 HWM005.E05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421073.1|BE421073 HWM005.E06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421075.1|BE421075 HWM005.E08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421076.1|BE421076 HWM005.E09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421077.1|BE421077 HWM005.E10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421078.1|BE421078 HWM005.E11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421085.1|BE421085 HWM005.F06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421086.1|BE421086 HWM005.F07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421087.1|BE421087 HWM005.F08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421088.1|BE421088 HWM005.F09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421090.1|BE421090 HWM005.F11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421091.1|BE421091 HWM005.F12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421096.1|BE421096 HWM005.G05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421100.1|BE421100 HWM005.G09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421101.1|BE421101 HWM005.G10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421102.1|BE421102 HWM005.G11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421105.1|BE421105 HWM005.H02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421108.1|BE421108 HWM005.H05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421110.1|BE421110 HWM005.H07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421121.1|BE421121 HWM006.A06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421126.1|BE421126 HWM006.A11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421129.1|BE421129 HWM006.B02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421130.1|BE421130 HWM006.B03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421131.1|BE421131 HWM006.B04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421133.1|BE421133 HWM006.B06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421137.1|BE421137 HWM006.B10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421143.1|BE421143 HWM006.C04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421155.1|BE421155 HWM006.D04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421157.1|BE421157 HWM006.D06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421162.1|BE421162 HWM006.D11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421164.1|BE421164 HWM006.E01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421167.1|BE421167 HWM006.E04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421168.1|BE421168 HWM006.E05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421169.1|BE421169 HWM006.E06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421170.1|BE421170 HWM006.E07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421171.1|BE421171 HWM006.E08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421178.1|BE421178 HWM006.F03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421179.1|BE421179 HWM006.F04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421190.1|BE421190 HWM006.G03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421191.1|BE421191 HWM006.G04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421192.1|BE421192 HWM006.G05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421193.1|BE421193 HWM006.G06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421196.1|BE421196 HWM006.G09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421199.1|BE421199 HWM006.G12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421200.1|BE421200 HWM006.H01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421201.1|BE421201 HWM006.H02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421205.1|BE421205 HWM006.H06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421206.1|BE421206 HWM006.H07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421209.1|BE421209 HWM006.H10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421212.1|BE421212 HWM007.A01 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421213.1|BE421213 HWM007.A02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421219.1|BE421219 HWM007.A08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421221.1|BE421221 HWM007.A10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421222.1|BE421222 HWM007.A11 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421226.1|BE421226 HWM007.B03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421228.1|BE421228 HWM007.B05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421233.1|BE421233 HWM007.B10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421244.1|BE421244 HWM007.C09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421251.1|BE421251 HWM007.D04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421264.1|BE421264 HWM007.E05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421268.1|BE421268 HWM007.E09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421271.1|BE421271 HWM007.E12 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421273.1|BE421273 HWM007.F02 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421274.1|BE421274 HWM007.F03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421275.1|BE421275 HWM007.F04 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421279.1|BE421279 HWM007.F08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421280.1|BE421280 HWM007.F09 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421281.1|BE421281 HWM007.F10 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421286.1|BE421286 HWM007.G03 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421288.1|BE421288 HWM007.G05 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421289.1|BE421289 HWM007.G06 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421290.1|BE421290 HWM007.G07 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421291.1|BE421291 HWM007.G08 ITEC HWM Barley Leaf Libr... 59 5e-008
gb|BE421292.1|BE421292 HWM007.G09 ITEC HWM Barley Leaf Libr... 59 5e-008
>gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_N08 5', mRNA sequence
Length = 647
Score = 235 bits (507), Expect(3) = 5e-075
Identities = 100/133 (75%), Positives = 110/133 (82%)
Frame = +2 / +2
Query: 491 LHNTLRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDR 670
L NTLRLTRDNIKA+IMDVMFGGTETVAS IEWAMAEMM SP++LRRLQ+ELADVVGLDR
Sbjct: 248 LQNTLRLTRDNIKAMIMDVMFGGTETVASGIEWAMAEMMQSPNELRRLQEELADVVGLDR 427
Query: 671 NVNESDLDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGR 850
NV+ESDLDKLPFLKCVIKET E A DCVVGGYSVP+GS +M+NV+ IGR
Sbjct: 428 NVDESDLDKLPFLKCVIKETLRLHPPIPILHHENAKDCVVGGYSVPQGSSIMINVFDIGR 607
Query: 851 HRASWKDADAFRP 889
+ WKDAD FRP
Sbjct: 608 NAKVWKDADMFRP 646
Score = 121 bits (259), Expect(3) = 3e-034
Identities = 61/122 (50%), Positives = 67/122 (54%)
Frame = -2 / -3
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQSPAXXXXXXXXXXXXXXXSLMTHL 709
GRN SASFH +RPM+ TL M EP GTE*PPTTQS A SL+THL
Sbjct: 645 GRNMSASFHTLAFRPMSKTLIMILEPWGTE*PPTTQSLAFSWWRIGMGGCSRSVSLITHL 466
Query: 708 RKGSLSRSDSFTFXXXXXXXXXXXXXXXXXSGLCXXXXXXXXXXXATVSVPPNITSMMIA 529
RKGSLSRSDS TF GLC ATVSVPPNITSM++A
Sbjct: 465 RKGSLSRSDSSTFRSRPTTSASSSCSRRSSLGLCIISAIAHSIPDATVSVPPNITSMIMA 286
Query: 528 LI 523
L+
Sbjct: 285 LM 280
Score = 74.8 bits (157), Expect(2) = 7e-016
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQVVGAV 608
E RD RV +RLLD ALEEGELV+VRL+++ V+AH V +LLLQP ++VGA+
Sbjct: 517 ENRDGRV*SKRLLDYALEEGELVEVRLIYISVEAHHVSKLLLQPTKLVGAL 365
Score = 46.0 bits (94), Expect(3) = 5e-075
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 224 QEFSKLFGAFNVVDFLPWLSWMD 292
QEFS LF AF++ DF+PWLSW D
Sbjct: 2 QEFSHLFAAFSLGDFIPWLSWAD 70
Score = 40.5 bits (82), Expect(3) = 5e-075
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +2 / +2
Query: 296 QGINXXXXXXXXXXXXFIDKIIDEHVRRGKNP 391
QG N FID IIDEHV RGKNP
Sbjct: 71 QGTNVRARAARAALDEFIDFIIDEHVERGKNP 166
Score = 33.6 bits (67), Expect(3) = 3e-034
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 291 SIQLSHGRKSTTLKAPNSFENSC 223
S QLSHG KS L A +ENSC
Sbjct: 69 SAQLSHGMKSPRLNAAKRWENSC 1
Score = 33.6 bits (67), Expect(3) = 3e-034
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2 / -3
Query: 390 GFFPRLTCSSMILSMNXXXXXXXXXXXRLMP 298
GF P TCSSMI SMN L+P
Sbjct: 165 GFLPLSTCSSMIKSMNSSRAARAARARTLVP 73
Score = 29.9 bits (59), Expect(2) = 7.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1 / +1
Query: 232 LEAVRRLQRRRLPAVAELDGPAGHQPPP 315
L ++RR+Q RRL VA+L GP + P
Sbjct: 10 LPSLRRVQPRRLHPVAQLGGPGHQRARP 93
Score = 29.5 bits (58), Expect(2) = 7e-016
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1 / -2
Query: 553 KHHVHDDSLDIVAREPE 503
KHHVHD D+V E E
Sbjct: 310 KHHVHDHGFDVVTGEAE 260
Score = 22.1 bits (42), Expect(2) = 7.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3 / +3
Query: 606 CTAPTTCAGCSR 641
C APT+ GC R
Sbjct: 363 CKAPTSFVGCRR 398
>gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007G18f, mRNA sequence
Length = 426
Score = 201 bits (434), Expect = 6e-051
Identities = 89/124 (71%), Positives = 95/124 (76%)
Frame = +2 / +1
Query: 497 NTLRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNV 676
NTLRL RDNIKA++MDVM GGTET A AI WAMAEMMH PDDLRRLQ+EL VGLDRNV
Sbjct: 55 NTLRLRRDNIKAMMMDVMLGGTETAACAIYWAMAEMMHRPDDLRRLQKELFYTVGLDRNV 234
Query: 677 NESDLDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRHR 856
NE DLDKL FLKCVIKET ETA DCVVGGYSVPR SRVM+NV+ IGR
Sbjct: 235 NE*DLDKLHFLKCVIKETLRLHPPIPLLLHETAEDCVVGGYSVPRASRVMINVFDIGRDA 414
Query: 857 ASWK 868
+WK
Sbjct: 415 KAWK 426
Score = 79.0 bits (166), Expect(2) = 3e-018
Identities = 39/66 (59%), Positives = 40/66 (60%)
Frame = -2 / -2
Query: 867 FHEARWRPMAHTLTMTREPLGTE*PPTTQSPAXXXXXXXXXXXXXXXSLMTHLRKGSLSR 688
FH RPM+ TL MTRE GTE*PPTTQS A SLMTHLRK SLSR
Sbjct: 425 FHALASRPMSKTLIMTREARGTE*PPTTQSSAVSCRSSGMGGCSRSVSLMTHLRKWSLSR 246
Query: 687 SDSFTF 670
S SFTF
Sbjct: 245 SHSFTF 228
Score = 73.0 bits (153), Expect(2) = 2e-014
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQVVGAV 608
EQ + RVQPERLLDD LEE ELV+V LVH+PV+ H V ELLL Q+V +V
Sbjct: 318 EQWNGRVQPERLLDDTLEEVELVEVSLVHIPVETHRVKELLL*STQIVRSV 166
Score = 33.1 bits (66), Expect(2) = 3e-018
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 615 GLCXXXXXXXXXXXATVSVPPNITSMMIALI 523
GLC A VSVPPNITS+++AL+
Sbjct: 173 GLCIISAMAQ*IAHAAVSVPPNITSIIMALM 81
Score = 26.3 bits (51), Expect(2) = 2e-014
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 556 AKHHVHDDSLDIVAREPE 503
A+HHVH L++V +P+
Sbjct: 114 AQHHVHHHGLNVVTPQPK 61
>gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18p14 5', mRNA sequence
Length = 341
Score = 187 bits (403), Expect = 1e-046
Identities = 80/104 (76%), Positives = 84/104 (80%)
Frame = +2 / +1
Query: 566 TVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKETXXXXX 745
TVASAIEWAMAEMMHSPDDLRRLQ+EL D VGLDRNVNESDLDKLPFLKCVIKET
Sbjct: 25 TVASAIEWAMAEMMHSPDDLRRLQKELVDTVGLDRNVNESDLDKLPFLKCVIKETLRLHP 204
Query: 746 XXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDAD 877
ETA DCVVGGYSVPR SRVM+NV+AIGR +WKD D
Sbjct: 205 PIPLLLHETAEDCVVGGYSVPRASRVMINVFAIGRDAKAWKDPD 336
Score = 98.7 bits (209), Expect = 7e-020
Identities = 53/106 (50%), Positives = 53/106 (50%)
Frame = -2 / -1
Query: 882 NASASFHEARWRPMAHTLTMTREPLGTE*PPTTQSPAXXXXXXXXXXXXXXXSLMTHLRK 703
N S SFH RPMA TL MTRE GTE*PPTTQS A SLMTHLRK
Sbjct: 341 NVSGSFHALASRPMAKTLIMTREARGTE*PPTTQSSAVSXRSSGMGGCSRSVSLMTHLRK 162
Query: 702 GSLSRSDSFTFXXXXXXXXXXXXXXXXXSGLCXXXXXXXXXXXATV 565
GSLSRSDSFTF SGLC ATV
Sbjct: 161 GSLSRSDSFTFRSRPTVSTSSFCNRRRSSGLCIISAIAHSIADATV 24
Score = 83.1 bits (175), Expect = 3e-015
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQVVGAV 608
EQ D RVQPERLLDD LEEGELV+VRLVH+PV+ H V ELLL +VV AV
Sbjct: 219 EQWDGRVQPERLLDDTLEEGELVEVRLVHIPVETHRVDELLL*STEVVRAV 67
>gb|BI951511.1|BI951511 HVSMEm0001D04f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0001D04f, mRNA sequence
Length = 828
Score = 122 bits (260), Expect(3) = 8e-045
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = +2 / +3
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKP 1075
EGEAAG+DFKGGCFEFLPFGSGRRSCPG ALGLY+LELAVA L GFNW LP M+P
Sbjct: 219 EGEAAGVDFKGGCFEFLPFGSGRRSCPGMALGLYSLELAVAHLGDGFNWELPHDMRP 389
Score = 69.3 bits (145), Expect(3) = 2e-023
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -2 / -3
Query: 1074 GFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
G M GS QL P ATASS+ Y+PSA+PGHERRP+P GRN
Sbjct: 388 GLMSWGSSQLNPSPRCATASSNEYKPSAIPGHERRPDPNGRN 263
Score = 67.5 bits (141), Expect(3) = 8e-045
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 692 DKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGR 850
D+L + +CVIKET E A DCVV GYSVPRGSRV++NV+AIGR
Sbjct: 2 DELGWRECVIKETLRLHPPIPMLNHENAEDCVVDGYSVPRGSRVIINVFAIGR 160
Score = 54.2 bits (112), Expect(3) = 2e-023
Identities = 29/53 (54%), Positives = 29/53 (54%)
Frame = -2 / -1
Query: 849 RPMAHTLTMTREPLGTE*PPTTQSPAXXXXXXXXXXXXXXXSLMTHLRKGSLS 691
RPMA TL MTREP GTE*P TTQS A SLMTH R S S
Sbjct: 159 RPMAKTLIMTREPRGTE*PSTTQSSAFSWLSIGMGGCNRSVSLMTHSRHPSSS 1
Score = 35.0 bits (70), Expect = 0.99
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 780 TASWAATPCPGAPASWST 833
TAS ATPCPGAP S ST
Sbjct: 90 TASSTATPCPGAPVSLST 143
Score = 33.1 bits (66), Expect(4) = 8e-006
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELV 692
E RD RVQ +RLLDDAL +LV
Sbjct: 70 EHRDGRVQSKRLLDDALTPPKLV 2
Score = 30.4 bits (60), Expect(3) = 8e-045
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 860 SWKDADAFRPSRF 898
+WKD D FRPSRF
Sbjct: 171 AWKDPDMFRPSRF 209
Score = 29.9 bits (59), Expect(4) = 8e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 1069 HAVGQRPVEAVRELGDGE 1016
H VGQ PVE + E+ DGE
Sbjct: 383 HVVGQFPVEPIAEMRDGE 330
Score = 24.0 bits (46), Expect(3) = 2e-023
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 900 VKRDGRNASASFH 862
+ R+GRN S SFH
Sbjct: 211 MNREGRNMSGSFH 173
Score = 23.5 bits (45), Expect(4) = 8e-006
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 1245 PNSYPRTPHPP 1213
P + PR+PHPP
Sbjct: 783 PPTPPRSPHPP 751
Score = 22.6 bits (43), Expect(4) = 8e-006
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -2
Query: 889 RPERVGVLPRGA 854
R E VGVLPR A
Sbjct: 200 RSEHVGVLPRAA 165
>gb|BE559347.1|BE559347 HV_CEb0024D15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024D15f, mRNA sequence
Length = 749
Score = 179 bits (385), Expect = 4e-044
Identities = 71/87 (81%), Positives = 79/87 (90%)
Frame = +2 / +3
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
EGEAA +DF+G CF FLPFGSGRRSCPG ALG+Y+LE AVAQLAHGFNW+LPDGMKPSEL
Sbjct: 219 EGEAAKVDFRGNCF*FLPFGSGRRSCPGMALGIYSLEFAVAQLAHGFNWALPDGMKPSEL 398
Query: 1085 DMGDVFGLTAPRATRLYAVPTPRLNCP 1165
DM D+FGLTAPRA+RL AVPTPRL+ P
Sbjct: 399 DMTDIFGLTAPRASRLCAVPTPRLSHP 479
Score = 124 bits (266), Expect(2) = 2e-029
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = -2 / -2
Query: 1167 KGQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAV 988
+G SRGVGTA SL+ARGAV PK S MSSS+GFMPSGS QL P ASWATA+SS PSA+
Sbjct: 481 QGCESRGVGTAQSLLARGAVSPKMSVMSSSDGFMPSGSAQLNPWASWATANSSE*MPSAI 302
Query: 987 PGHERRPEPKGRN 949
PGHERRP+P GRN
Sbjct: 301 PGHERRPDPNGRN 263
Score = 86.8 bits (183), Expect = 3e-016
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -1 / -1
Query: 1156 EPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
+PGR HG EP GARRGE+EDV HV+LR LHA+GQRPVE V ELGD +
Sbjct: 470 KPGRWHGAEPAGARRGESEDVGHVELRRLHAIGQRPVEPVGELGDSK 330
Score = 28.6 bits (56), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3 / -2
Query: 53 SCSPGDPLVLERPP 12
+CSPGD +VL +PP
Sbjct: 178 ACSPGDGIVLPKPP 137
>gb|BQ468032.1|BQ468032 HR01L12r HR Hordeum vulgare subsp. vulgare cDNA clone HR01L12
5-PRIME, mRNA sequence
Length = 463
Score = 176 bits (379), Expect = 2e-043
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+DFKG CFEFLPFGSGRRSCPG ALG+Y+LE AVAQLAHGFNW+LPDGMKPSELDM D+F
Sbjct: 462 VDFKGNCFEFLPFGSGRRSCPGMALGIYSLEFAVAQLAHGFNWALPDGMKPSELDMTDIF 283
Query: 1103 GLTAPRATRLYAVPTPRLNCP 1165
GLTAPRATRL AVPTPRL+ P
Sbjct: 282 GLTAPRATRLCAVPTPRLSHP 220
Score = 124 bits (266), Expect = 9e-028
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = -2 / +2
Query: 1167 KGQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAV 988
+G SRGVGTA SLVARGAV PK S MSSS+GFMPSGS QL P ASWATA+S+ PSA+
Sbjct: 218 QGCESRGVGTAQSLVARGAVSPKMSVMSSSDGFMPSGSAQLNPWASWATANSNE*MPSAI 397
Query: 987 PGHERRPEPKGRN 949
PGHERRP+P GRN
Sbjct: 398 PGHERRPDPNGRN 436
Score = 84.5 bits (178), Expect = 1e-015
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -1 / +1
Query: 1156 EPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
+PGR HG +P GARRGE+EDV HV+LR LHA+GQRPVE V ELGD +
Sbjct: 229 KPGRWHGAKPGGARRGESEDVGHVELRRLHAIGQRPVEPVGELGDSK 369
>gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 3', mRNA sequence
Length = 644
Score = 164 bits (353), Expect = 9e-040
Identities = 64/127 (50%), Positives = 86/127 (67%)
Frame = +2 / -3
Query: 776 GDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFL 955
GDC + GY VP G+ ++VNVWAIGR SW+DA+ + P RF EG A ++FKG F+FL
Sbjct: 447 GDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPERFIDEGSAVHVNFKGNDFQFL 268
Query: 956 PFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLY 1135
PFG+GRR CPG LG+ +EL +A L + F+W LP G+ ++DM +VFGLT R +L
Sbjct: 267 PFGAGRRMCPGINLGITNVELMLANLIYHFDWELPVGVDRKDIDMAEVFGLTMRRKEKLL 88
Query: 1136 AVPTPRL 1156
VP R+
Sbjct: 87 LVPKSRM 67
Score = 52.8 bits (109), Expect(2) = 2e-013
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = -2 / +2
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R +GT S R V P TS +S S P+GS Q K +A SS+ P +PGH
Sbjct: 71 RDLGTNSSFSFRRMVSPNTSAISMSFLSTPTGSSQSKWYMRFANISSTLVIPRFIPGHIL 250
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 251 RPAPNGKN 274
Score = 43.2 bits (88), Expect(2) = 2e-013
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / +2
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQSP 775
G +SAS HE PMAHTLT P GT *P QSP
Sbjct: 335 GMYSSASSHELESLPMAHTLTRMCVPAGTM*PTMLQSP 448
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 81.3 bits (171), Expect(3) = 7e-039
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 398 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 577
Query: 1091 GDVFGLT 1111
+ GLT
Sbjct: 578 EEFGGLT 598
Score = 61.1 bits (127), Expect(3) = 7e-039
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 266 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 397
Score = 57.4 bits (119), Expect(3) = 7e-039
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +2 / +2
Query: 512 TRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDL 691
TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V SD+
Sbjct: 8 TRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDM 187
Query: 692 DKLPFLKCVIKET 730
KL +L+ V+ ET
Sbjct: 188 PKLKYLRMVLSET 226
Score = 46.9 bits (96), Expect(2) = 3e-010
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / -2
Query: 1110 VRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
VRP S +S +P GS QLK + A +S P A PG RRP PKGR+
Sbjct: 597 VRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRPAPKGRS 436
Score = 38.2 bits (77), Expect(2) = 3e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 393 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 286
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 397 EPLRVEHLGVLPRGRVPADRPRV 329
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 595 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 503
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 478 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 299
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 298 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 119
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 118 VPKSRM 101
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 105 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 284
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 285 RPAPNGKN 308
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 479 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 300
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 299 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 120
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 119 VPKSRM 102
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 106 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 285
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 286 RPAPNGKN 309
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 457 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 278
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 277 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 98
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 97 VPKSRM 80
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 84 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 263
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 264 RPAPNGKN 287
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 478 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 299
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 298 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 119
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 118 VPKSRM 101
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 105 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 284
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 285 RPAPNGKN 308
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 487 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 308
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 307 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 128
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 127 VPKSRM 110
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 114 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 293
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 294 RPAPNGKN 317
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 484 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 305
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 304 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 125
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 124 VPKSRM 107
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 111 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 290
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 291 RPAPNGKN 314
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 457 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 278
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 277 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 98
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 97 VPKSRM 80
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 84 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 263
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 264 RPAPNGKN 287
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 458 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 279
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 278 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 99
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 98 VPKSRM 81
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 85 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 264
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 265 RPAPNGKN 288
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 471 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 292
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 291 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 112
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 111 VPKSRM 94
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +2
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 98 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 277
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 278 RPAPNGKN 301
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 479 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 300
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 299 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 120
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 119 VPKSRM 102
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 106 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 285
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 286 RPAPNGKN 309
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 159 bits (341), Expect = 4e-038
Identities = 63/126 (50%), Positives = 84/126 (66%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 462 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 283
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 282 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLL 103
Query: 1139 VPTPRL 1156
VP R+
Sbjct: 102 VPKSRM 85
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +2
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 89 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 268
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 269 RPAPNGKN 292
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 155 bits (333), Expect = 5e-037
Identities = 59/119 (49%), Positives = 84/119 (70%)
Frame = +2 / +2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGS 967
+ GY VP G+ V++NVWAIGR + W++A+ F P RF EG AAG++FKG F+FLPFG+
Sbjct: 374 IDGYMVPAGTHVLINVWAIGRDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGA 553
Query: 968 GRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVP 1144
GRR CPG LG+ +EL +A L + F+W LP G++ +++M ++FGLT R +L VP
Sbjct: 554 GRRMCPGINLGIATVELMLANLMYHFDWELPLGVERKDINMTELFGLTMRRKEKLMLVP 730
Score = 45.5 bits (93), Expect(3) = 5e-008
Identities = 27/76 (35%), Positives = 33/76 (43%)
Frame = -2 / -3
Query: 1176 RQYKGQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRP 997
R Y GT S R V P S + S PSG+ Q K +A SS+ P
Sbjct: 762 RIYPSNYMCDFGTNISFSFRRMVSPNNSVILISFLSTPSGNSQSKWYIKFANISSTVAIP 583
Query: 996 SAVPGHERRPEPKGRN 949
+PGH RP P G+N
Sbjct: 582 RFIPGHILRPAPNGKN 535
Score = 30.9 bits (61), Expect(3) = 5e-008
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -2 / -3
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*P 793
G N+SAS PMAHTL T P GT P
Sbjct: 474 GMNSSASSQ*LESLPMAHTLIKTCVPAGTMYP 379
Score = 23.5 bits (45), Expect(3) = 5e-008
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSP 42
LVPNSCSP
Sbjct: 26 LVPNSCSP 3
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 152 bits (327), Expect = 4e-036
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 391 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 212
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRL 1132
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 211 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 38
Score = 45.5 bits (93), Expect = 7e-004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -2 / +3
Query: 1119 RGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
R V P TS +S S P GS Q K +A SS+ P +PGH RP P G+N
Sbjct: 51 RRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN 221
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 3', mRNA sequence
Length = 689
Score = 152 bits (327), Expect = 4e-036
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 401 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 222
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRL 1132
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 221 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 48
Score = 45.5 bits (93), Expect = 7e-004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -2 / +1
Query: 1119 RGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
R V P TS +S S P GS Q K +A SS+ P +PGH RP P G+N
Sbjct: 61 RRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN 231
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e08 3', mRNA sequence
Length = 594
Score = 152 bits (327), Expect = 4e-036
Identities = 60/118 (50%), Positives = 80/118 (67%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 405 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 226
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRL 1132
FG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT R +L
Sbjct: 225 FGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKL 52
Score = 45.5 bits (93), Expect = 7e-004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -2 / +2
Query: 1119 RGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
R V P TS +S S P GS Q K +A SS+ P +PGH RP P G+N
Sbjct: 65 RRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN 235
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 142 bits (304), Expect(2) = 4e-036
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 509 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 330
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 329 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 150
Query: 1139 VP 1144
VP
Sbjct: 149 VP 144
Score = 38.6 bits (78), Expect(3) = 2e-008
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 145 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 324
Query: 963 PKGR 952
P GR
Sbjct: 325 PNGR 336
Score = 33.6 bits (67), Expect(2) = 4e-036
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2 / -1
Query: 557 GTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
GT+T +E+AMA +M +PD + +LQ E+
Sbjct: 737 GTDTSYIVMEYAMARLMQNPDLMTKLQAEV 648
Score = 31.3 bits (62), Expect(3) = 2e-008
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1 / +3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
++R R V+PE LLDD L G++V++ L
Sbjct: 531 QKRRRHVKPECLLDDGL*VGQMVKIVL 611
Score = 25.4 bits (49), Expect(3) = 2e-008
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 445 IARLLTMTRVPDGMV*PFMTQS 510
>gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A21f, mRNA sequence
Length = 627
Score = 107 bits (228), Expect(2) = 4e-036
Identities = 42/120 (35%), Positives = 69/120 (57%)
Frame = +2 / +2
Query: 581 IEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKETXXXXXXXXXX 760
IEW M +++ +P+ +R++++EL V+G + ESD+ +LP+L+ V KE
Sbjct: 17 IEWGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESDIGRLPYLQAVAKEILRLRMVVPLV 196
Query: 761 XXETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGG 940
+ D V GY +P+G+ V++N WAI R+ +W D D F P RF GE A +++ G
Sbjct: 197 PRKAEADIEVNGYRIPKGTNVILNAWAINRNADAWSDPDKFVPERFIGAGETAARNYQLG 376
Score = 65.2 bits (136), Expect(2) = 4e-036
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +2 / +2
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTA 1114
G FE +PFG GRR CPG L + L + L H F W LP +K + +DM + G+
Sbjct: 374 GQDFEMIPFGLGRRICPGMPLAQKLIPLILGTLLHRFEWELPADVKETGIDMTEKCGVVL 553
Query: 1115 PRATRLYAVP 1144
T L A+P
Sbjct: 554 SLITPLTAIP 583
Score = 40.9 bits (83), Expect(2) = 6e-006
Identities = 25/70 (35%), Positives = 31/70 (44%)
Frame = -2 / -1
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQSPAXXXXXXXXXXXXXXXSLMTHL 709
G N S S H + +R +AH +T PLG *P T+ S + SL T
Sbjct: 324 GTNLSGSDHASAFRLIAHAFRITLVPLGIL*PFTSMSASALRGTSGTTIRRRRISLATAW 145
Query: 708 RKGSLSRSDS 679
R GS SDS
Sbjct: 144 RYGSRPMSDS 115
Score = 29.5 bits (58), Expect(2) = 6e-006
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = -2 / -1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
+G A V + P S MS +GS +S ++ S +PG RRP
Sbjct: 585 LGMAVRGVIKDNTTPHFSVMSIPVSLTSAGSSHSNRWSSVPRIRGISF*ASGIPGQMRRP 406
Query: 966 EPKG 955
P G
Sbjct: 405 RPNG 394
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024N22f,
mRNA sequence
Length = 653
Score = 87.2 bits (184), Expect(3) = 9e-036
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / +2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 308 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESP 487
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 488 GLVTFMGTPLQAIATPRL 541
Score = 57.9 bits (120), Expect(3) = 9e-036
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP RF E
Sbjct: 185 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEE 304
Score = 56.5 bits (117), Expect(3) = 6e-023
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = -2 / -3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G +PSG D LK C+ ++ PS PGH
Sbjct: 537 RGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 358
Query: 972 RPEPKG 955
RP PKG
Sbjct: 357 RPAPKG 340
Score = 45.5 bits (93), Expect(3) = 6e-023
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
Q +R RRVQ E LLDD + ++++V L H V A D+ ELLLQ
Sbjct: 157 QHERRRRVQTEGLLDDGHQVRQVLEVGLGHDAVTADDIVELLLQ 26
Score = 44.1 bits (90), Expect(3) = 9e-036
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 611 SPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKET 730
+P ++LQ+EL +VVG DR + E+D LP+L V+KE+
Sbjct: 5 NPXVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKES 124
Score = 43.7 bits (89), Expect(3) = 6e-023
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / -3
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 294 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 184
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 189 AATTSPRVPTSW*TCG 236
Score = 23.5 bits (45), Expect(2) = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 220 HGERVGGGPRPQGVE 264
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 79.9 bits (168), Expect(3) = 2e-034
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
+G + +G EF+PFG+GRR CPG LEL +A L + F+W++P G P +
Sbjct: 1355 QGTSVEYSSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPEAM 1534
Query: 1085 DMGDVFGLTAPRATRLY 1135
DMG+VFG+ + L+
Sbjct: 1535 DMGEVFGIIVHTRSSLH 1585
Score = 55.6 bits (115), Expect(3) = 2e-034
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2 / +2
Query: 674 VNESDLDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRH 853
+ +DL L +L+ VIKET + +C V GY +P+G+ VM+N +A+GR
Sbjct: 1127 ITSADLAGLHYLRMVIKETLRLHPSAPLIHRASQENCRVMGYDIPKGTAVMINAFAVGRD 1306
Query: 854 RASW 865
A W
Sbjct: 1307 PAHW 1318
Score = 49.2 bits (101), Expect(3) = 2e-034
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
LT + I A+I D+ T+T A+ +EWAMAE++ +P + R + E+ ++
Sbjct: 956 LTSEIISAVIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEVRQML 1105
Score = 48.3 bits (99), Expect(2) = 3e-005
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -2 / -3
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P TSPMS + G P G Q K + A+ SSS + PGH RP P G N
Sbjct: 1554 PNTSPMSIASGLSPPGIAQSK*YSRLASTSSSMVVANRAPGHCLRPAPNGTN 1399
Score = 24.4 bits (47), Expect(2) = 3e-005
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDD 716
+QR VQP+R LDD
Sbjct: 1213 DQRSGGVQPQRFLDD 1169
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 79.9 bits (168), Expect(3) = 3e-034
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
+G + +G EF+PFG+GRR CPG LEL +A L + F+W++P G P +
Sbjct: 1291 QGTSVEYSSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPETM 1470
Query: 1085 DMGDVFGLTAPRATRLY 1135
DMG+VFG+ + L+
Sbjct: 1471 DMGEVFGIIVHTRSSLH 1521
Score = 55.6 bits (115), Expect(3) = 3e-034
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRH 853
+ +DL L +L+ VIKET + +C V GY +P+G+ VM+N +A+GR
Sbjct: 1063 ITSADLAGLHYLRMVIKETLRLHPSAPLIHRASQENCRVMGYDIPKGTAVMINAFAVGRD 1242
Query: 854 RASW 865
A W
Sbjct: 1243 PAHW 1254
Score = 48.7 bits (100), Expect(3) = 3e-034
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
LT + I A+I D+ T+T A+ +EWAMAE++ +P + R + E+ ++
Sbjct: 892 LTSEIISAVIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEVRQML 1041
Score = 46.9 bits (96), Expect(2) = 6e-005
Identities = 23/52 (44%), Positives = 26/52 (50%)
Frame = -2 / -2
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P TSPMS G P G Q K + A+ SSS + PGH RP P G N
Sbjct: 1490 PNTSPMSIVSGLSPPGIAQSK*YSRLASTSSSMVVANRAPGHCLRPAPNGTN 1335
Score = 24.4 bits (47), Expect(2) = 6e-005
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDD 716
+QR VQP+R LDD
Sbjct: 1149 DQRSGGVQPQRFLDD 1105
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 121 bits (259), Expect(2) = 3e-034
Identities = 46/94 (48%), Positives = 63/94 (67%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 428 DCVINGYTIPSGTRVIVNSRAIARDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 607
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLP 1060
FG+GRR CPG L + A+E+ + L + F+W LP
Sbjct: 608 FGTGRRICPGINLAIGAIEIMLTNLVYHFDWKLP 709
Score = 44.6 bits (91), Expect(2) = 3e-034
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LTR+ +KA ++ + GT+T +E+AMA +M +PD + +LQ E+ + +++ D
Sbjct: 152 LTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVTED 331
Score = 28.1 bits (55), Expect(3) = 8e-004
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
++R R V+PE LLD L G++V++ L
Sbjct: 406 QKRRRHVKPECLLDHGL*VGQMVKIVL 326
Score = 25.8 bits (50), Expect(3) = 8e-004
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2 / -3
Query: 1059 GSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGR 952
GS Q K + S A +PGH RP P GR
Sbjct: 708 GSFQSKWYTRLVSMISMAPMARFIPGHILRPVPNGR 601
Score = 25.4 bits (49), Expect(3) = 8e-004
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 492 IARLLTMTRVPDGMV*PFMTQS 427
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 73.9 bits (155), Expect(3) = 5e-034
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D + ++ D++ G +T ++EWAMAE++ +P ++LQ+EL +VVG DR + E+D
Sbjct: 45 LSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETD 224
Query: 689 LDKLPFLKCVIKET 730
LP+L V+KE+
Sbjct: 225 FQNLPYLMDVVKES 266
Score = 55.6 bits (115), Expect(3) = 5e-034
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2 / +3
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
+D KG F LPFG+GRR CPG G+ + + + H SLP+ +P + +M
Sbjct: 450 IDIKGIDFRVLPFGAGRRVCPGAHFGINLVASMIGPMLHPLTRSLPESPRPKDFNM 617
Score = 53.8 bits (111), Expect(3) = 5e-034
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2 / +3
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP R E
Sbjct: 327 VGGYNIPKGANVMVNVWAVARDPKVWTSPLEFRPERSLEE 446
Score = 45.5 bits (93), Expect(3) = 2e-016
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
Q +R RRVQ E LLDD + ++++V L H V A D+ ELLLQ
Sbjct: 299 QHERRRRVQTEGLLDDVHQVRQVLEVGLGHDAVTADDIVELLLQ 168
Score = 41.4 bits (84), Expect(3) = 2e-016
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2 / -1
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
+R G N+S H R AHT TMT PLG *PPT
Sbjct: 436 ERSGLNSSGLVHTLGSRATAHTFTMTLAPLGML*PPT 326
Score = 36.8 bits (74), Expect(3) = 2e-016
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2 / -1
Query: 1107 RPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKG 955
+P S M S G SG D + C+ ++ P PGH RP PKG
Sbjct: 634 QPGDSLMLKSFGLGLSGKDLVNGCSMGPIIEATRLIPK*APGHTLRPAPKG 482
Score = 27.6 bits (54), Expect(2) = 4.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +1
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 331 AATTSPRVPTSW*TCG 378
Score = 22.1 bits (42), Expect(2) = 4.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ V+
Sbjct: 362 HGERVGGGPRPQGVD 406
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 57.9 bits (120), Expect(4) = 2e-033
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMK 1072
E +DF GG +E LPF +GRR CP A+G+ E + L + NW+ P G K
Sbjct: 527 EELDVDFNGGHYELLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSGDK 688
Score = 57.9 bits (120), Expect(4) = 2e-033
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +2
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 128 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 307
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 308 SDMPKLKYLRMVLSET 355
Score = 56.5 bits (117), Expect(4) = 2e-033
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F RF
Sbjct: 395 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYLERF 526
Score = 35.0 bits (70), Expect(3) = 5e-006
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 882 NASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
N S SFHEA P+AH T+ G *PP+
Sbjct: 510 NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 415
Score = 27.2 bits (53), Expect(3) = 5e-006
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2 / -1
Query: 1065 PSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P G Q K + +S P A G RRP KGR+
Sbjct: 681 PEGGAQFKQ*SKLXRMNSVLATPMASTGQIRRPAXKGRS 565
Score = 26.7 bits (52), Expect(4) = 2e-033
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2 / +3
Query: 1055 LPDGMKPSELDMGDVFGLTAPRATRLYAVPTP 1150
LP G+K G+ GLT P + PTP
Sbjct: 672 LPQGIKDRGFGPGEF*GLTFPYKKPFWLCPTP 767
Score = 24.9 bits (48), Expect(3) = 5e-006
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2 / -3
Query: 1149 GVGTA*SLVARGAVRPKTSPMSSSEGFMPSG 1057
GVG + G VRP+ SP + F+P G
Sbjct: 766 GVGHSQKGFLYGKVRPQNSPGPNPRSFIP*G 674
>gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014A11f, mRNA sequence
Length = 674
Score = 90.0 bits (190), Expect(2) = 3e-033
Identities = 37/75 (49%), Positives = 55/75 (73%)
Frame = +2 / +1
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
++T ++KA+I+++ GTET ++ +EWA+AE++ PD L+R Q+EL VVG D+ V ES
Sbjct: 106 KITDTDVKALILNLFVAGTETTSTMVEWAVAELIRHPDMLKRAQEELDAVVGRDKLVAES 285
Query: 686 DLDKLPFLKCVIKET 730
DL +L FL VIKET
Sbjct: 286 DLPRLAFLGAVIKET 330
Score = 73.0 bits (153), Expect(2) = 3e-033
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGG 940
+C V GY +P+G+ ++VNVW I R A W D FRP+RF P G A +D KGG
Sbjct: 382 ECEVAGYRIPKGTELLVNVWGIARDPALWPDPLEFRPARFLPGGTHADVDVKGG 543
Score = 64.8 bits (135), Expect(2) = 3e-017
Identities = 32/49 (65%), Positives = 34/49 (69%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQVV 617
Q QR RRVQPERLLDD EEGE QVRL V AHD +LLL+P Q V
Sbjct: 363 QRQRRRRVQPERLLDDRAEEGEARQVRLRDELVPAHDGVQLLLRPLQHV 217
Score = 44.1 bits (90), Expect(2) = 3e-017
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2 / -1
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
GRN+S S H A R M HTLT + PLG *P T+ S
Sbjct: 491 GRNSSGSGHRAGSRAMPHTLTSSSVPLGMR*PATSHS 381
Score = 30.4 bits (60), Expect(2) = 0.10
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 826 GQRVGHRPPPRLVEGRRRVP 885
GQRVGHRP P V RVP
Sbjct: 429 GQRVGHRPRPGPVARPARVP 488
Score = 26.7 bits (52), Expect(3) = 1.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 886 PERVGVLPRGAVAADGPHV 830
PE V P+G VA D PHV
Sbjct: 489 PELERVGPQGRVAGDAPHV 433
Score = 25.4 bits (49), Expect(2) = 0.10
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / +2
Query: 795 ATPCPGAPASWSTCG 839
AT P A + WSTCG
Sbjct: 398 ATASPRARSCWSTCG 442
Score = 24.0 bits (46), Expect(3) = 1.3
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = -2 / -1
Query: 723 LMTHLRKGSLSRSDSFTFXXXXXXXXXXXXXXXXXSGLCXXXXXXXXXXXATVSVPPNIT 544
LMT RK RSDS T SG VSVP
Sbjct: 323 LMTAPRKARRGRSDSATSLSRPTTASSSSCARFSMSGCRISSATAHSTIVDVVSVPATNK 144
Query: 543 SMMIAL 526
M AL
Sbjct: 143 FSMSAL 126
Score = 21.7 bits (41), Expect(3) = 1.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1 / -1
Query: 1192 SRPRMASVQGAVEPGR 1145
SRP + S V PGR
Sbjct: 548 SRPPLTSTSACVPPGR 501
>gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. vulgare cDNA clone HT09E03
5-PRIME, mRNA sequence
Length = 609
Score = 108 bits (231), Expect(2) = 3e-033
Identities = 48/121 (39%), Positives = 68/121 (56%)
Frame = +2 / +2
Query: 512 TRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDL 691
TRD IK++IMD++ G+ET A+ +EWAMAE++ +P + + E+ V E DL
Sbjct: 5 TRDAIKSVIMDILGAGSETAATTLEWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQDL 184
Query: 692 DKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKD 871
+L +L+ VI ET E C V GY VPRG++V+VN WA+GR W
Sbjct: 185 TELAYLRLVIWETLRLHPPIPLLFRECQKSCQVLGYDVPRGTQVLVNAWALGRDERYWHH 364
Query: 872 A 874
A
Sbjct: 365 A 367
Score = 54.2 bits (112), Expect(2) = 3e-033
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +2 / +2
Query: 917 AGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
A +D F FLPFG+GRR CPG A G+ +EL +A L F+W
Sbjct: 404 AAVDLGAVDFVFLPFGAGRRMCPGMAFGVANVELPLASLLFHFDW 538
Score = 38.6 bits (78), Expect = 0.078
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2 / -1
Query: 1071 FMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
F Q K + A+ SS+ P+A+PGH RP P GRN
Sbjct: 558 FAEHAHSQSKWKSKLASGSSTLATPNAIPGHILRPAPNGRN 436
>gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 5', mRNA sequence
Length = 522
Score = 142 bits (304), Expect = 5e-033
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 67 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 246
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 247 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 426
Query: 1139 VP 1144
VP
Sbjct: 427 VP 432
Score = 38.6 bits (78), Expect(2) = 5e-004
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / -2
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 431 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 252
Query: 963 PKGR 952
P GR
Sbjct: 251 PNGR 240
Score = 25.4 bits (49), Expect(2) = 5e-004
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -2
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 131 IARLLTMTRVPDGMV*PFMTQS 66
>gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 3', mRNA sequence
Length = 583
Score = 142 bits (304), Expect = 5e-033
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 527 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 348
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 347 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 168
Query: 1139 VP 1144
VP
Sbjct: 167 VP 162
Score = 38.6 bits (78), Expect(2) = 4e-004
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 163 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 342
Query: 963 PKGR 952
P GR
Sbjct: 343 PNGR 354
Score = 25.4 bits (49), Expect(2) = 4e-004
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 463 IARLLTMTRVPDGMV*PFMTQS 528
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 142 bits (304), Expect = 5e-033
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 527 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 348
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 347 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 168
Query: 1139 VP 1144
VP
Sbjct: 167 VP 162
Score = 38.6 bits (78), Expect(3) = 4e-006
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 163 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 342
Query: 963 PKGR 952
P GR
Sbjct: 343 PNGR 354
Score = 25.4 bits (49), Expect(3) = 4e-006
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 463 IARLLTMTRVPDGMV*PFMTQS 528
Score = 23.5 bits (45), Expect(3) = 4e-006
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 760 EQRDRRVQPERLLDD 716
++R R V+PE LLDD
Sbjct: 549 QKRRRHVKPECLLDD 593
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 142 bits (304), Expect = 5e-033
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 509 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 330
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 329 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 150
Query: 1139 VP 1144
VP
Sbjct: 149 VP 144
Score = 38.6 bits (78), Expect(3) = 1e-006
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 145 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 324
Query: 963 PKGR 952
P GR
Sbjct: 325 PNGR 336
Score = 25.4 bits (49), Expect(3) = 1e-006
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 760 EQRDRRVQPERLLDDAL 710
++R R V+PE LLDD L
Sbjct: 531 QKRRRHVKPECLLDDGL 581
Score = 25.4 bits (49), Expect(3) = 1e-006
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 445 IARLLTMTRVPDGMV*PFMTQS 510
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 142 bits (304), Expect = 5e-033
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 117 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 296
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FG+GRR CPG + A+E+ +A L + F+W LP G + M + FGLT R +L
Sbjct: 297 FGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLL 476
Query: 1139 VP 1144
VP
Sbjct: 477 VP 482
Score = 38.6 bits (78), Expect(3) = 6e-007
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / -1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 481 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 302
Query: 963 PKGR 952
P GR
Sbjct: 301 PNGR 290
Score = 26.3 bits (51), Expect(3) = 6e-007
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGE 698
++R R V+PE LLDD L G+
Sbjct: 95 QKRRRHVKPECLLDDGL*VGQ 33
Score = 25.4 bits (49), Expect(3) = 6e-007
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -1
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 181 IARLLTMTRVPDGMV*PFMTQS 116
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 459 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 280
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 279 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 100
Query: 1139 VP 1144
VP
Sbjct: 99 VP 94
Score = 31.3 bits (62), Expect(2) = 0.13
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / +2
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 95 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 274
Query: 963 PKGR 952
P G+
Sbjct: 275 PNGK 286
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 567 VTQDDLHGLPYLKAVIKET 511
Score = 27.2 bits (53), Expect(2) = 0.13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 484 ERPRHVKPECLLDHCL*VGQTVEIVL 561
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 477 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 298
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 297 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 118
Query: 1139 VP 1144
VP
Sbjct: 117 VP 112
Score = 31.3 bits (62), Expect(2) = 0.13
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / +2
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 113 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 292
Query: 963 PKGR 952
P G+
Sbjct: 293 PNGK 304
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 585 VTQDDLHGLPYLKAVIKET 529
Score = 27.2 bits (53), Expect(2) = 0.13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 502 ERPRHVKPECLLDHCL*VGQTVEIVL 579
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 242 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 421
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 422 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 601
Query: 1139 VP 1144
VP
Sbjct: 602 VP 607
Score = 31.3 bits (62), Expect(2) = 0.12
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / -1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 606 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 427
Query: 963 PKGR 952
P G+
Sbjct: 426 PNGK 415
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 134 VTQDDLHGLPYLKAVIKET 190
Score = 27.2 bits (53), Expect(2) = 0.12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 217 ERPRHVKPECLLDHCL*VGQTVEIVL 140
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 460 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 281
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 280 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 101
Query: 1139 VP 1144
VP
Sbjct: 100 VP 95
Score = 31.3 bits (62), Expect(2) = 0.12
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / +3
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 96 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 275
Query: 963 PKGR 952
P G+
Sbjct: 276 PNGK 287
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 568 VTQDDLHGLPYLKAVIKET 512
Score = 27.2 bits (53), Expect(2) = 0.12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +2
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 485 ERPRHVKPECLLDHCL*VGQTVEIVL 562
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 495 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 316
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 315 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 136
Query: 1139 VP 1144
VP
Sbjct: 135 VP 130
Score = 31.3 bits (62), Expect(2) = 0.12
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / +2
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 131 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 310
Query: 963 PKGR 952
P G+
Sbjct: 311 PNGK 322
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 603 VTQDDLHGLPYLKAVIKET 547
Score = 27.2 bits (53), Expect(2) = 0.12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 520 ERPRHVKPECLLDHCL*VGQTVEIVL 597
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 131 bits (280), Expect(2) = 1e-032
Identities = 47/122 (38%), Positives = 73/122 (59%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 496 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 317
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYA 1138
FGSGRR CPG ++L + L + F+W LP + ++M + FGLT R +L
Sbjct: 316 FGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLL 137
Query: 1139 VP 1144
VP
Sbjct: 136 VP 131
Score = 31.3 bits (62), Expect(2) = 0.12
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2 / +3
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT+ S R V P S + GS Q K + + S +PGH RP+
Sbjct: 132 GTSRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPD 311
Query: 963 PKGR 952
P G+
Sbjct: 312 PNGK 323
Score = 29.9 bits (59), Expect(2) = 1e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 604 VTQDDLHGLPYLKAVIKET 548
Score = 27.2 bits (53), Expect(2) = 0.12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / +2
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 521 ERPRHVKPECLLDHCL*VGQTVEIVL 598
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40p23 5', mRNA sequence
Length = 502
Score = 128 bits (275), Expect(2) = 5e-032
Identities = 49/118 (41%), Positives = 70/118 (59%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C V GY +P G RV++N WA+ R SW+ A F P R G AA +D+KG F +LP
Sbjct: 142 ECNVNGYIIPSGIRVIINSWALARDPGSWEHAXEFMPERXMECGSAATMDYKGNDFSYLP 321
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRL 1132
FG+GRR CPG + +E+ +A L + FNW LP + + M ++FG+T R +L
Sbjct: 322 FGTGRRICPGINFAIATIEIMLANLIYHFNWKLPTELMEDGISMTELFGMTVHRKEKL 495
Score = 29.9 bits (59), Expect(2) = 5e-032
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V E+DLD L +LK IKET
Sbjct: 34 VTEADLDSLAYLKAXIKET 90
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak43p03 5', mRNA sequence
Length = 589
Score = 126 bits (269), Expect(2) = 3e-031
Identities = 47/108 (43%), Positives = 66/108 (61%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C V GY +P G RV++N WA+ R SW+ AD F P RF G AA +D+KG F +LP
Sbjct: 185 ECNVNGYIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLP 364
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
FG+GRR CPG + +E+ +A L + FNW LP + + M ++F
Sbjct: 365 FGTGRRICPGINFAIATIEIMLANLIYHFNWKLPTELMEDGISMTELF 508
Score = 29.9 bits (59), Expect(2) = 3e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 674 VNESDLDKLPFLKCVIKET 730
V E+DLD +LK VIKET
Sbjct: 77 VTEADLDSXAYLKAVIKET 133
>gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 5', mRNA sequence
Length = 603
Score = 68.4 bits (143), Expect(3) = 9e-031
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LT IKA+I+D+ G+ET A+ ++WAM+E+M P+ + + Q E+ + + V E D
Sbjct: 120 LTMGMIKAVILDLFGAGSETSATTLQWAMSELMRYPNVMLKAQAEVRNNLQGKSKVTEDD 299
Query: 689 LDKLPFLKCVIKET 730
L L +L+ VIKET
Sbjct: 300 LANLKYLRLVIKET 341
Score = 57.4 bits (119), Expect(3) = 9e-031
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
C + GY +P G+ V+VN WAIGR W+D + F+P RF
Sbjct: 396 CKILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERF 512
Score = 46.4 bits (95), Expect(3) = 9e-031
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPG 988
E+ +DFKG FE++PFG+GRR CPG
Sbjct: 513 ESGMVDFKGTNFEYIPFGAGRRMCPG 590
>gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak43p03 3', mRNA sequence
Length = 358
Score = 134 bits (287), Expect = 1e-030
Identities = 51/117 (43%), Positives = 71/117 (60%)
Frame = +2 / -3
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPF 961
C V GY +P G RV++N WA+ R SW+ AD F P RF G AA +D+KG F +LPF
Sbjct: 356 CNVNGYIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLPF 177
Query: 962 GSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRL 1132
G+GRR CPG + +E+ +A L + FNW LP + + M ++FG+T R +L
Sbjct: 176 GTGRRICPGINFAIATIEIMLANLIYHFNWKLPTELMEDGISMTELFGMTVHRKEKL 6
>gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 5', mRNA sequence
Length = 617
Score = 80.8 bits (170), Expect(3) = 2e-030
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / +3
Query: 776 GDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCF 946
GDC + GY VP G+ ++VNVWAIGR SW+DA+ + P RF EG A ++FKG F
Sbjct: 447 GDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPERFIDEGSAVHVNFKGNDF 617
Score = 65.7 bits (137), Expect(3) = 2e-030
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LTRD+IKA++ DV FG T T ++ +E+ +AE+M P + +LQ E+ +V L +
Sbjct: 177 LTRDHIKALLTDVFFGLTNTSSNTLEFTLAELMRRPSLMGKLQDEVRSIVPLGQETVIET 356
Query: 689 LDKLPFLKCVIKET 730
K+ +L+ VIKE+
Sbjct: 357 DIKMVYLRAVIKES 398
Score = 43.2 bits (88), Expect = 0.003
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2 / -2
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQSP 775
G +SAS HE PMAHTLT P GT *P QSP
Sbjct: 559 GMYSSASSHELESLPMAHTLTRMCVPAGTM*PTMLQSP 446
Score = 24.9 bits (48), Expect(3) = 2e-030
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 344 FIDKIIDEHVRRGKN 388
F+DK+ID+++ +GK+
Sbjct: 69 FLDKLIDDNMSKGKS 113
>gb|AU252315.1|AU252315 AU252315 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C08 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 540
Score = 99.1 bits (210), Expect(2) = 3e-030
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +2 / +1
Query: 929 FKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGL 1108
+K FE+LPFG+GRR CPG GL L+L VA+L + F+WSLP G +P ELDM GL
Sbjct: 238 YKASRFEYLPFGTGRRKCPGDTFGLATLDLIVARLLYYFDWSLPAGTRPDELDMETSLGL 417
Query: 1109 TAPRATRLYAVPTP 1150
TA R +L+ V TP
Sbjct: 418 TARRKNQLHLVATP 459
Score = 53.8 bits (111), Expect(2) = 3e-030
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
C VGG+ + G+RV+VN WA+ R W++A+ F P RF
Sbjct: 103 CDVGGFEIKEGTRVLVNAWAMARSPEYWENAEEFMPERF 219
Score = 47.3 bits (97), Expect(2) = 7e-007
Identities = 28/66 (42%), Positives = 33/66 (50%)
Frame = -2 / -2
Query: 1149 GVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERR 970
GV T S AV P+ MSSS G +P+G Q K S AT SS P+ PGH
Sbjct: 458 GVATRCSWFFLLAVSPRLVSMSSSSGRVPAGRLQSK**RSRATMRSSVASPNVSPGHFLL 279
Query: 969 PEPKGR 952
P P G+
Sbjct: 278 PVPNGK 261
Score = 26.3 bits (51), Expect(2) = 7e-007
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2 / -2
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQ 781
G N+SA + +AH LT T P PPT+Q
Sbjct: 209 GMNSSAFSQYSGLLAIAHALTKTLVPSLISNPPTSQ 102
>gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25l12 3', mRNA sequence
Length = 470
Score = 132 bits (282), Expect = 6e-030
Identities = 53/117 (45%), Positives = 73/117 (62%)
Frame = +2 / -1
Query: 794 GYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGR 973
GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LPFG+GR
Sbjct: 470 GYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGR 291
Query: 974 RSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVP 1144
R CPG + A+E+ +A L + F+W LP G + M + FGLT R +L VP
Sbjct: 290 RICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLLVP 120
Score = 38.6 bits (78), Expect = 0.078
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +1
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 121 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPV 300
Query: 963 PKGR 952
P GR
Sbjct: 301 PNGR 312
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 104 bits (222), Expect(2) = 3e-029
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 371 DCIINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 550
Query: 959 FGSGRRSCPGTALGLYALELAVA 1027
FG+ RR CPG + A+E+ +A
Sbjct: 551 FGTXRRICPGINFAIAAIEIMLA 619
Score = 44.6 bits (91), Expect(2) = 3e-029
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LTR+ +KA ++ + GT+T +E+AMA +M +PD + +LQ E+ + +++ D
Sbjct: 95 LTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVTED 274
>gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak45m01 3', mRNA sequence
Length = 730
Score = 91.3 bits (193), Expect(2) = 5e-029
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E+ +DFKG FE++PFG+GRR CPG ++E+ +A L + F+W LP G+KP LDM
Sbjct: 435 ESGMVDFKGTNFEYIPFGAGRRMCPGMTFAQASMEIVLASLLYHFDWELPSGVKPDGLDM 256
Query: 1091 GDVFGLTAPRATRLY 1135
+ GLT R LY
Sbjct: 255 TEEMGLTVRRKNDLY 211
Score = 57.4 bits (119), Expect(2) = 5e-029
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / -2
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
C + GY +P G+ V+VN WAIGR W+D + F+P RF
Sbjct: 552 CKILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERF 436
Score = 42.8 bits (87), Expect(2) = 6e-004
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = -2 / +2
Query: 1119 RGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKG 955
R VRP +S MSS G P GS Q K S A+ S + +PGH P P G
Sbjct: 227 RRTVRPISSVMSSPSGLTPLGSSQSKW*RSEASTISMLACANVIPGHILLPAPNG 391
Score = 24.0 bits (46), Expect(2) = 6e-004
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1 / +1
Query: 742 VQPERLLDDALEEGELVQVRLVHV 671
+QP LLDD E E+ QV L H+
Sbjct: 595 MQPHCLLDDESEVLEIGQVILGHL 666
>gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003M04f, mRNA sequence
Length = 942
Score = 87.7 bits (185), Expect(2) = 9e-029
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
++T ++KA+I+++ GTET ++ +EWA+AE++ PD L+R +EL VVG D+ V ES
Sbjct: 47 KITDTDVKALILNLFVAGTETTSTIVEWAVAELIRHPDMLKRAHEELDAVVGRDKLVAES 226
Query: 686 DLDKLPFLKCVIKET 730
DL +L FL VIKET
Sbjct: 227 DLPRLAFLGAVIKET 271
Score = 63.8 bits (133), Expect(2) = 9e-016
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQVV 617
Q QR RRVQPERLLDD EEGE QVRL V AHD +LL++P Q V
Sbjct: 304 QRQRRRRVQPERLLDDRAEEGEARQVRLRDELVPAHDGVQLLMRPLQHV 158
Score = 60.2 bits (125), Expect(2) = 9e-029
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAA 919
+C V GY +P+G+ ++VNVW I R A W D F+P+RF P G A
Sbjct: 323 ECEVAGYRIPKGTELLVNVWGITRDPALWPDPLEFQPARFLPGGTHA 463
Score = 40.0 bits (81), Expect(2) = 9e-016
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
G N+S S H A R M HTLT + PLG *P T+ S
Sbjct: 432 GWNSSGSGHRAGSRVMPHTLTSSSVPLGMR*PATSHS 322
Score = 28.1 bits (55), Expect(2) = 0.34
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1 / +1
Query: 826 GQRVGHRPPPRLVEGRRRVP 885
GQRVGH P P V RVP
Sbjct: 370 GQRVGHHPRPGPVARPARVP 429
Score = 25.8 bits (50), Expect(2) = 0.34
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3 / +3
Query: 780 TASWAATPCPGAPASWSTCG 839
+A AT P A + WSTCG
Sbjct: 324 SAKSPATASPRARSCWSTCG 383
>gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004I01f, mRNA sequence
Length = 741
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 269 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 448
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 449 EEFGGLTFRKKKPLVLVPT 505
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 137 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 268
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / -1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 504 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 325
Query: 966 EPKGRN 949
PKGR+
Sbjct: 324 APKGRS 307
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 264 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 157
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 268 EPLRVEHLGVLPRGRVPADRPRV 200
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 466 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 374
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 378 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 199
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 198 EEFGGLTFRKKKPLVLVPT 142
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 510 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 379
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 143 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 322
Query: 966 EPKGRN 949
PKGR+
Sbjct: 323 APKGRS 340
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 383 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 490
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 379 EPLRVEHLGVLPRGRVPADRPRV 447
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 181 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 273
>gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35a04 3', mRNA sequence
Length = 719
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 427 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 248
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 247 EEFGGLTFRKKKPLVLVPT 191
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 559 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 428
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 192 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 371
Query: 966 EPKGRN 949
PKGR+
Sbjct: 372 APKGRS 389
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 432 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 539
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 428 EPLRVEHLGVLPRGRVPADRPRV 496
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 230 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 322
>gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 3', mRNA sequence
Length = 718
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 426 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 247
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 246 EEFGGLTFRKKKPLVLVPT 190
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 558 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 427
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 191 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 370
Query: 966 EPKGRN 949
PKGR+
Sbjct: 371 APKGRS 388
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 431 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 538
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 427 EPLRVEHLGVLPRGRVPADRPRV 495
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 229 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 321
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 349 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 170
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 169 EEFGGLTFRKKKPLVLVPT 113
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 481 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 350
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 114 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 293
Query: 966 EPKGRN 949
PKGR+
Sbjct: 294 APKGRS 311
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 354 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 461
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 350 EPLRVEHLGVLPRGRVPADRPRV 418
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 152 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 244
>gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c10 3', mRNA sequence
Length = 669
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 426 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 247
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 246 EEFGGLTFRKKKPLVLVPT 190
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 558 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 427
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 191 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 370
Query: 966 EPKGRN 949
PKGR+
Sbjct: 371 APKGRS 388
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 431 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 538
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 427 EPLRVEHLGVLPRGRVPADRPRV 495
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 229 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 321
>gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g21 3', mRNA sequence
Length = 670
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 427 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 248
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 247 EEFGGLTFRKKKPLVLVPT 191
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 559 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 428
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 192 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 371
Query: 966 EPKGRN 949
PKGR+
Sbjct: 372 APKGRS 389
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 432 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 539
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 428 EPLRVEHLGVLPRGRVPADRPRV 496
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 230 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 322
>gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4j07 3', mRNA sequence
Length = 646
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 389 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 210
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 209 EEFGGLTFRKKKPLVLVPT 153
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 521 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 390
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 154 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 333
Query: 966 EPKGRN 949
PKGR+
Sbjct: 334 APKGRS 351
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 394 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 501
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 390 EPLRVEHLGVLPRGRVPADRPRV 458
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 192 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 284
>gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11k05 3', mRNA sequence
Length = 630
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 390 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 211
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 210 EEFGGLTFRKKKPLVLVPT 154
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 522 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 391
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 155 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 334
Query: 966 EPKGRN 949
PKGR+
Sbjct: 335 APKGRS 352
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 395 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 502
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 391 EPLRVEHLGVLPRGRVPADRPRV 459
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 193 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 285
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 369 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 548
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 549 EEFGGLTFRKKKPLVLVPT 605
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 237 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 368
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / -1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 604 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 425
Query: 966 EPKGRN 949
PKGR+
Sbjct: 424 APKGRS 407
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 364 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 257
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 368 EPLRVEHLGVLPRGRVPADRPRV 300
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 566 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 474
>gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 5', mRNA sequence
Length = 586
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 171 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 350
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 351 EEFGGLTFRKKKPLVLVPT 407
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 39 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 170
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / -1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 406 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 227
Query: 966 EPKGRN 949
PKGR+
Sbjct: 226 APKGRS 209
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 166 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 59
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 170 EPLRVEHLGVLPRGRVPADRPRV 102
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 368 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 276
>gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c24 3', mRNA sequence
Length = 578
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 412 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 233
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 232 EEFGGLTFRKKKPLVLVPT 176
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 544 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 413
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 177 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 356
Query: 966 EPKGRN 949
PKGR+
Sbjct: 357 APKGRS 374
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 417 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 524
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 413 EPLRVEHLGVLPRGRVPADRPRV 481
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 215 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 307
>gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l15 3', mRNA sequence
Length = 566
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 434 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 255
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 254 EEFGGLTFRKKKPLVLVPT 198
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 566 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 435
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 199 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 378
Query: 966 EPKGRN 949
PKGR+
Sbjct: 379 APKGRS 396
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 439 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 546
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 435 EPLRVEHLGVLPRGRVPADRPRV 503
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 237 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 329
>gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b11 3', mRNA sequence
Length = 560
Score = 86.8 bits (183), Expect(2) = 9e-029
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 390 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 211
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 210 EEFGGLTFRKKKPLVLVPT 154
Score = 61.1 bits (127), Expect(2) = 9e-029
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 522 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 391
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 155 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 334
Query: 966 EPKGRN 949
PKGR+
Sbjct: 335 APKGRS 352
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 395 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 502
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 391 EPLRVEHLGVLPRGRVPADRPRV 459
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 193 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 285
>gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
5-PRIME, mRNA sequence
Length = 616
Score = 79.0 bits (166), Expect(2) = 1e-028
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
D V G+ +P G+ MVN+WAI W + + FRP RF AA L G P
Sbjct: 389 DVRVDGFLIPAGTTAMVNMWAITHDPDVWAEPEEFRPERFVAGQPAAELSVMGSDLRLAP 568
Query: 959 FGSGRRSCPGTALGL 1003
FG+GRRSCPG +L +
Sbjct: 569 FGAGRRSCPGKSLAM 613
Score = 68.4 bits (143), Expect(2) = 1e-028
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
+L ++ A++ +++F GT+TVA +EW +A ++ D R+ +EL VVG DR V+ES
Sbjct: 110 KLADADMIAVLWEMVFRGTDTVAVLMEWVLARLVLHRDVQARVHEELDRVVGRDRAVDES 289
Query: 686 DLDKLPFLKCVIKET 730
D L +L VIKET
Sbjct: 290 DAASLAYLHAVIKET 334
Score = 43.7 bits (89), Expect(2) = 1e-010
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQP 629
EQR RV P+RLLDD +E GE ++ LV V H +LL+ P
Sbjct: 364 EQRAWRVHPQRLLDDGVEVGEGGRIGLVDGAVAPHHAVKLLVHP 233
Score = 42.8 bits (87), Expect(2) = 1e-010
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = -2 / -2
Query: 987 PGHERRPEPKGRNXXXXXXXXXXXXXXSGVKRDGRNASASFHEARWRPMAHTLTMTREPL 808
PG RP P G R GRN+S S H + MAH TM P
Sbjct: 597 PGQLLRPAPNGARRRSDPITESSAAGCPATNRSGRNSSGSAHTSGSWVMAHMFTMAVVPA 418
Query: 807 GTE*PPTTQS 778
G P T S
Sbjct: 417 GMRKPSTRTS 388
Score = 31.3 bits (62), Expect(2) = 0.003
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 823 HGQRVGHRPPPRLVEGRRRVP 885
HG+ VGH P PR V RVP
Sbjct: 433 HGEHVGHNPRPRRVGRAGRVP 495
Score = 29.9 bits (59), Expect(2) = 0.003
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3 / +3
Query: 780 TASWAATPCPGAPASWSTCG 839
T +W A+ P AP W TCG
Sbjct: 390 TCAWTASSSPLAPRPW*TCG 449
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 105 bits (225), Expect(2) = 1e-028
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 348 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 527
Query: 959 FGSGRRSCPGTALGLYALELAVAQL 1033
FG+GRR CPG + +E+ + L
Sbjct: 528 FGTGRRICPGINFXIAXIEIMLXNL 602
Score = 44.1 bits (90), Expect(2) = 1e-028
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
LTR+ +KA ++ + GT+T +E+AMA +M +PD + +LQ E+
Sbjct: 72 LTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 209
Score = 31.3 bits (62), Expect(3) = 6e-004
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
++R R V+PE LLDD L G++V++ L
Sbjct: 326 QKRRRHVKPECLLDDGL*VGQMVKIVL 246
Score = 25.4 bits (49), Expect(3) = 6e-004
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 412 IARLLTMTRVPDGMV*PFMTQS 347
Score = 23.1 bits (44), Expect(3) = 6e-004
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2 / -3
Query: 987 PGHERRPEPKGR 952
PGH RP P GR
Sbjct: 556 PGHILRPVPNGR 521
>gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 3', mRNA sequence
Length = 511
Score = 86.8 bits (183), Expect(2) = 2e-028
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 391 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 212
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 211 EEFGGLTFRKKKPLVLVPT 155
Score = 60.2 bits (125), Expect(2) = 2e-028
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2 / -1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 502 LGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 392
Score = 48.3 bits (99), Expect(2) = 1e-010
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 156 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 335
Query: 966 EPKGRN 949
PKGR+
Sbjct: 336 APKGRS 353
Score = 38.2 bits (77), Expect(2) = 1e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 396 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 503
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 392 EPLRVEHLGVLPRGRVPADRPRV 460
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 194 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 286
>gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 5', mRNA sequence
Length = 528
Score = 61.1 bits (127), Expect(3) = 3e-028
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 314 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 445
Score = 57.9 bits (120), Expect(3) = 3e-028
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +2
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 47 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 226
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 227 SDMPKLKYLRMVLSET 274
Score = 45.1 bits (92), Expect(3) = 3e-028
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPG 988
E +DF GG +E LPFG+GRR CPG
Sbjct: 446 EELDVDFNGGHYELLPFGAGRRICPG 523
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 441 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 334
Score = 32.2 bits (64), Expect = 6.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 445 EPLRVEHLGVLPRGRVPADRPRV 377
Score = 26.7 bits (52), Expect(2) = 2e-004
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 993 AVPGHERRPEPKGRN 949
A PG RRP PKGR+
Sbjct: 528 ASPGQIRRPAPKGRS 484
>gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. vulgare cDNA clone HT06E05
5-PRIME, mRNA sequence
Length = 700
Score = 69.8 bits (146), Expect(3) = 3e-028
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2 / +1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLP 1060
EAA DF GG F+PFG+GRR CPG A GL +EL +A L F+W LP
Sbjct: 265 EAAKADFGGGDLAFVPFGAGRRMCPGMAFGLAGVELPLASLLFHFDWELP 414
Score = 63.8 bits (133), Expect(3) = 3e-028
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRH 853
V+E L +LP+L+ VI+ET E C V GY VPRG++V+VN WA+ R
Sbjct: 28 VSEDALSELPYLRIVIRETLRLHAPLPLLFRECQEPCQVQGYDVPRGTQVLVNGWALCRD 207
Query: 854 RASWKDA 874
W DA
Sbjct: 208 ERYWPDA 228
Score = 43.2 bits (88), Expect(2) = 2e-005
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -2 / -3
Query: 1059 GSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
GS Q K + A+ SS+ RP+A+PGH RP PKG N
Sbjct: 413 GSSQSKWKSRLASGSSTPARPNAMPGHILRPAPKGTN 303
Score = 29.9 bits (59), Expect(3) = 3e-028
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2 / +1
Query: 1064 GMKPSELDMGDVFGLTAPRATRLYAVPTPRLNCP 1165
G ++LDM + FGLTA R +L P R+ P
Sbjct: 415 GPGSAKLDMTETFGLTARRTDQLLLRPVLRVPIP 516
Score = 28.6 bits (56), Expect(2) = 2e-005
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 757 QRDRRVQPERLLDD 716
QR RRVQP+RL DD
Sbjct: 111 QRQRRVQPQRLPDD 70
>gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29b02 3', mRNA sequence
Length = 617
Score = 99.6 bits (211), Expect(2) = 6e-028
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG E LPFG+GRR CP LGL ++L +A L HG+ W LPDGM EL M + F
Sbjct: 418 VDVKGHDLELLPFGAGRRMCPAHGLGLKMVQLVLANLLHGYAWRLPDGMAAEELSMEEKF 239
Query: 1103 GLTAPRATRLYAVPTPRLNCPLY 1171
G++ R L+A+P P+L LY
Sbjct: 238 GISVSRMHHLHAIPEPKLMDHLY 170
Score = 51.5 bits (106), Expect(2) = 6e-010
Identities = 28/73 (38%), Positives = 35/73 (47%)
Frame = -2 / +3
Query: 1173 QYKGQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPS 994
+Y+ +S G G A R P S M SS MPSGS PC+ +A+ S + P
Sbjct: 168 KYR*SISLGSGIAWR*CMRDTDMPNFSSMLSSSAAMPSGSLHA*PCSKFASTS*TILSPR 347
Query: 993 AVPGHERRPEPKG 955
GH RP PKG
Sbjct: 348 PWAGHILRPAPKG 386
Score = 45.5 bits (93), Expect(2) = 6e-028
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2 / -2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADA 880
+ GY +P G+RV+VNVWAIGR W + A
Sbjct: 544 IAGYEIPVGTRVLVNVWAIGRDPTVWGETAA 452
Score = 32.7 bits (65), Expect(2) = 6e-010
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2 / +3
Query: 882 NASASFHEARWRPMAHTLTMTREPLGTE*P 793
+A+ S H RP+A TLT TR P G *P
Sbjct: 450 SAAVSPHTVGSRPIAQTLTSTRVPTGIS*P 539
Score = 32.2 bits (64), Expect = 6.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVREL 1028
G R +E AR A+ + H QL HAVG+ P AV+++
Sbjct: 191 GLRDSMEMMHARHRYAKLLLHAQLLSRHAVGESPRIAVQQV 313
>gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23p07 3', mRNA sequence
Length = 610
Score = 87.2 bits (184), Expect(2) = 6e-028
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 414 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESP 235
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 234 GLVTFMGTPLQAIATPRL 181
Score = 57.9 bits (120), Expect(2) = 6e-028
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2 / -2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP RF E
Sbjct: 537 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEE 418
Score = 56.5 bits (117), Expect(3) = 2e-016
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = -2 / +2
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G +PSG D LK C+ ++ PS PGH
Sbjct: 185 RGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 364
Query: 972 RPEPKG 955
RP PKG
Sbjct: 365 RPAPKG 382
Score = 43.7 bits (89), Expect(3) = 2e-016
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / +2
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 428 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 538
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / -3
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 533 AATTSPRVPTSW*TCG 486
Score = 23.5 bits (45), Expect(3) = 2e-016
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 763 QEQRDRRVQPERLLD 719
Q +R RRVQ E LLD
Sbjct: 565 QHERRRRVQTEGLLD 609
Score = 23.5 bits (45), Expect(2) = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 502 HGERVGGGPRPQGVE 458
>gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04G02V 5', mRNA sequence
Length = 606
Score = 87.2 bits (184), Expect(2) = 6e-028
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 389 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGXRPEDISMMESP 210
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 209 GLVTFMGTPLQAIATPRL 156
Score = 57.9 bits (120), Expect(2) = 6e-028
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2 / -2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP RF E
Sbjct: 512 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEE 393
Score = 55.6 bits (115), Expect(2) = 2e-014
Identities = 28/66 (42%), Positives = 31/66 (46%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G PSG D LK C+ ++ PS PGH
Sbjct: 160 RGVAMACSGVPMKVTSPGDSIMLMSSGLXPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 339
Query: 972 RPEPKG 955
RP PKG
Sbjct: 340 RPAPKG 357
Score = 43.7 bits (89), Expect(2) = 2e-014
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / +1
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 403 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 513
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / -3
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 508 AATTSPRVPTSW*TCG 461
Score = 23.5 bits (45), Expect(2) = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 477 HGERVGGGPRPQGVE 433
>gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. vulgare cDNA clone HV02K08
3-PRIME, mRNA sequence
Length = 568
Score = 87.2 bits (184), Expect(2) = 6e-028
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / -1
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 427 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESP 248
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 247 GLVTFMGTPLQAIATPRL 194
Score = 57.9 bits (120), Expect(2) = 6e-028
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2 / -1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP RF E
Sbjct: 550 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEE 431
Score = 56.5 bits (117), Expect(2) = 1e-014
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G +PSG D LK C+ ++ PS PGH
Sbjct: 198 RGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 377
Query: 972 RPEPKG 955
RP PKG
Sbjct: 378 RPAPKG 395
Score = 43.7 bits (89), Expect(2) = 1e-014
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / +3
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 441 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 551
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / -2
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 546 AATTSPRVPTSW*TCG 499
Score = 23.5 bits (45), Expect(2) = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 515 HGERVGGGPRPQGVE 471
>gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200005G01F1, mRNA sequence
Length = 486
Score = 85.4 bits (180), Expect(2) = 6e-028
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +2 / +3
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+DF+G FE LPFG+GRR CPG L + L +A L H F WSLP ++ +DM D F
Sbjct: 216 IDFRGVDFELLPFGAGRRICPGMTLAARMVHLMLASLLHQFKWSLPVELERDGIDMEDKF 395
Query: 1103 GLTAPRATRLYAVPTP 1150
GLT + L V TP
Sbjct: 396 GLTLTKVVPLCIVATP 443
Score = 59.7 bits (124), Expect(2) = 6e-028
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2 / +3
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+ GY++P+GSRV VNVWAIGR + W + + F P RF
Sbjct: 93 IAGYTIPKGSRVFVNVWAIGRDKDVWDEPEKFMPERF 203
Score = 42.8 bits (87), Expect(2) = 1e-008
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -3
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*P 793
G N S S H + RPMAHT T TREP G *P
Sbjct: 193 GINFSGSSHTSLSRPMAHTFTKTREPFGIV*P 98
Score = 36.8 bits (74), Expect(2) = 1e-008
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2 / -3
Query: 1158 LSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGH 979
+ GV T +VRP S MS +G L C + A+ + + +PG
Sbjct: 451 IQTGVATIQRGTTLVSVRPNLSSMSIPSLSSSTGRLHLN*CNNEASIKCTILAANVIPGQ 272
Query: 978 ERRPEPKGRN 949
RRP P GR+
Sbjct: 271 IRRPAPNGRS 242
>gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21b10 3', mRNA sequence
Length = 604
Score = 112 bits (240), Expect(2) = 8e-028
Identities = 43/89 (48%), Positives = 60/89 (67%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DCV+ GY++P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LP
Sbjct: 528 DCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLP 349
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGF 1045
FG+GRR CPG + A+E+ +A L + F
Sbjct: 348 FGTGRRICPGINFAIAAIEIMLANLVYHF 262
Score = 31.8 bits (63), Expect(2) = 8e-028
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2 / -3
Query: 1049 WSLPDGMKPSELDMGDVFGLTAPRATRLYAVP 1144
W LP G + M + FGLT R +L VP
Sbjct: 257 WKLPPGSAERGISMTESFGLTVHRKDKLLLVP 162
Score = 28.1 bits (55), Expect(3) = 0.001
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2 / +2
Query: 1068 MPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGR 952
+P + +K A+ S A +PGH RP P GR
Sbjct: 239 IPVAASSMKWYTRLASMISMAAMAKFIPGHILRPVPNGR 355
Score = 25.4 bits (49), Expect(3) = 0.001
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 760 EQRDRRVQPERLLDDAL 710
++R R V+PE LLDD L
Sbjct: 550 QKRRRHVKPECLLDDGL 600
Score = 25.4 bits (49), Expect(3) = 0.001
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / +2
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 464 IARLLTMTRVPDGMV*PFMTQS 529
>gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 3', mRNA sequence
Length = 560
Score = 123 bits (263), Expect = 2e-027
Identities = 46/117 (39%), Positives = 69/117 (58%)
Frame = +2 / -3
Query: 794 GYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGR 973
GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ PFGSGR
Sbjct: 477 GYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGR 298
Query: 974 RSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVP 1144
R CPG ++L + L + F+W LP + ++M + FGLT R +L VP
Sbjct: 297 RICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLLVP 127
>gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. vulgare cDNA clone HV12J09
3-PRIME, mRNA sequence
Length = 518
Score = 123 bits (263), Expect = 2e-027
Identities = 46/117 (39%), Positives = 69/117 (58%)
Frame = +2 / -3
Query: 794 GYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGR 973
GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ PFGSGR
Sbjct: 516 GYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGR 337
Query: 974 RSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVP 1144
R CPG ++L + L + F+W LP + ++M + FGLT R +L VP
Sbjct: 336 RICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETFGLTVHRKEKLLLVP 166
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 81.3 bits (171), Expect(2) = 4e-027
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 369 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 548
Query: 1091 GDVFGLT 1111
+ GLT
Sbjct: 549 EEFGGLT 569
Score = 61.1 bits (127), Expect(2) = 4e-027
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 237 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 368
Score = 46.9 bits (96), Expect(2) = 3e-010
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / -3
Query: 1110 VRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
VRP S +S +P GS QLK + A +S P A PG RRP PKGR+
Sbjct: 568 VRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRPAPKGRS 407
Score = 38.2 bits (77), Expect(2) = 3e-010
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 364 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 257
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 368 EPLRVEHLGVLPRGRVPADRPRV 300
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 566 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 474
>gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
3-PRIME, mRNA sequence
Length = 591
Score = 86.8 bits (183), Expect(2) = 5e-027
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 437 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 258
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 257 EEFGGLTFRKKKPLVLVPT 201
Score = 55.1 bits (114), Expect(2) = 5e-027
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY + + ++VN WAIGR ASWKD + F P RF
Sbjct: 569 ETMRPIRLGGYDIXANTMLVVNAWAIGRDPASWKDPEVFYPERF 438
Score = 48.3 bits (99), Expect(2) = 2e-009
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 202 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 381
Query: 966 EPKGRN 949
PKGR+
Sbjct: 382 APKGRS 399
Score = 34.1 bits (68), Expect(2) = 2e-009
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2 / +1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T *PP+
Sbjct: 442 RSG*NTSGSFHEAGSLPIAHAFTTNMVLAXMS*PPS 549
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 438 EPLRVEHLGVLPRGRVPADRPRV 506
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 240 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 332
>gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. vulgare cDNA clone HU14K18
3-PRIME, mRNA sequence
Length = 588
Score = 109 bits (232), Expect(2) = 7e-027
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +2 / -3
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
+G A DFKG F+FLPFG+GRR CPG GL +E+ +A L + F+W LPDGMK ++
Sbjct: 469 DGAKATADFKGRDFQFLPFGAGRRMCPGMGFGLATVEVMLANLVYCFDWELPDGMKEEDV 290
Query: 1085 DMGDVFGLTAPRATRLYAVPT 1147
DM DVFG+T R +L VPT
Sbjct: 289 DMADVFGVTMRRKGKLVLVPT 227
Score = 64.8 bits (135), Expect = 1e-009
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT S R V P TS MS+S F+PSGS Q K A+ +S+ P +PGH RP
Sbjct: 228 VGTRTSFPFRRIVTPNTSAMSTSSSFIPSGSSQSKQ*TRLASMTSTVANPKPMPGHILRP 407
Query: 966 EPKGRN 949
P G+N
Sbjct: 408 APNGKN 425
Score = 32.2 bits (64), Expect(2) = 7e-027
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2 / -3
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASW 865
V GY VP +R ++N WA+ R W
Sbjct: 586 VNGYLVPARTRAIINAWALCRDTELW 509
>gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_C01 5', mRNA sequence
Length = 537
Score = 86.8 bits (183), Expect(2) = 7e-027
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 373 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 194
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 193 EEFGGLTFRKKKPLVLVPT 137
Score = 54.7 bits (113), Expect(2) = 7e-027
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GG +P V+VN WAIGR ASWKD + F P RF
Sbjct: 505 ETMRPIRLGGTXIPGQHHVVVNAWAIGRDPASWKDPEVFYPERF 374
Score = 48.3 bits (99), Expect(2) = 4e-009
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 138 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 317
Query: 966 EPKGRN 949
PKGR+
Sbjct: 318 APKGRS 335
Score = 33.1 bits (66), Expect(2) = 4e-009
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMT 820
R G N S SFHEA P+AH T T
Sbjct: 378 RSG*NTSGSFHEAGSLPIAHAFTTT 452
Score = 32.2 bits (64), Expect(2) = 6e-004
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 374 EPLRVEHLGVLPRGRVPADRPRV 442
Score = 31.3 bits (62), Expect(2) = 6e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 176 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 268
>gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. vulgare cDNA clone HU14K18
5-PRIME, mRNA sequence
Length = 630
Score = 106 bits (227), Expect(2) = 3e-026
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2 / +1
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
+G A DFKG F+FLPFG+GRR CPG GL +E+ +A L + F+W LPDGMK ++
Sbjct: 265 DGAKATADFKGRDFQFLPFGAGRRMCPGMGFGLATVEVMLANLVYCFDWELPDGMKEEDV 444
Query: 1085 DMGDVFGLTAPRATRLYAVP 1144
DM DVFG+T R +L VP
Sbjct: 445 DMADVFGVTMRRKGKLVLVP 504
Score = 63.4 bits (132), Expect(2) = 3e-013
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = -2 / -2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
+GT S R V P TS MS+S F+PSGS Q K A+ +S+ P +PGH RP
Sbjct: 506 LGTRTSFPFRRIVTPNTSAMSTSSSFIPSGSSQSKQ*TRLASMTSTVANPKPMPGHILRP 327
Query: 966 EPKGRN 949
P G+N
Sbjct: 326 APNGKN 309
Score = 35.0 bits (70), Expect(2) = 3e-013
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLV 677
E+R RRV+PERLL LE G + Q+ L+
Sbjct: 114 EERRRRVKPERLLYHGLEVGHVAQIVLL 31
Score = 32.2 bits (64), Expect(2) = 3e-026
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASW 865
V GY VP +R ++N WA+ R W
Sbjct: 148 VNGYLVPARTRAIINAWALCRDTELW 225
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 5', mRNA sequence
Length = 689
Score = 118 bits (253), Expect = 6e-026
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 440 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 619
Query: 959 FGSGRRSCPGTALGLYALELAVA 1027
FG+GRR CPG LG+ +EL +A
Sbjct: 620 FGAGRRMCPGMNLGIANVELMLA 688
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 108 bits (230), Expect(2) = 6e-026
Identities = 36/91 (39%), Positives = 57/91 (62%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 256 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 435
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
FGSGRR CPG ++L + L + F+W
Sbjct: 436 FGSGRRICPGINFATATIQLMLTNLMYHFDW 528
Score = 29.9 bits (59), Expect(2) = 6e-026
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 148 VTQDDLHGLPYLKAVIKET 204
Score = 27.2 bits (53), Expect(2) = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 757 QRDRRVQPERLLDDALEEGELVQVRL 680
+R R V+PE LLD L G+ V++ L
Sbjct: 231 ERPRHVKPECLLDHCL*VGQTVEIVL 154
Score = 24.9 bits (48), Expect(2) = 6.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 990 VPGHERRPEPKGR 952
+PGH RP+P G+
Sbjct: 467 IPGHILRPDPNGK 429
>gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0024G17f, mRNA sequence
Length = 696
Score = 53.8 bits (111), Expect(3) = 7e-026
Identities = 19/53 (35%), Positives = 35/53 (66%)
Frame = +2 / +3
Query: 566 TVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIK 724
T AIEW + E+++ P+ ++L+ E+ V+G+ + + E D +LP+L+ VIK
Sbjct: 3 TTVGAIEWGLXELVNHPEIQQKLRDEMDAVLGVGQQITEPDTHRLPYLQAVIK 161
Score = 51.5 bits (106), Expect(3) = 7e-026
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY++P S+++VN W + + WK D FRP RF E
Sbjct: 219 DAKLAGYNIPAESKILVNAWFLANNPEQWKRPDEFRPERFLEE 347
Score = 50.6 bits (104), Expect(3) = 7e-026
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGF 1045
E ++ G F +LPFG GRRSCPG L L L + + +L H F
Sbjct: 345 EEKHVEANGNDFTYLPFGVGRRSCPGIMLALPILGITIGRLVHNF 479
Score = 27.2 bits (53), Expect(3) = 0.003
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 996 SAVPGHERRPEPKGR 952
S +PG RRP PKGR
Sbjct: 430 SMMPGQLRRPTPKGR 386
Score = 26.7 bits (52), Expect(3) = 0.003
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
+QRD P LD L+ G+ V+VRL
Sbjct: 197 QQRDGHAHPPPPLDHRLQVGQPVRVRL 117
Score = 23.5 bits (45), Expect(3) = 0.003
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 897 KRDGRNASASFH 862
KR GRN+S FH
Sbjct: 337 KRSGRNSSGRFH 302
>gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011B08f, mRNA sequence
Length = 994
Score = 118 bits (252), Expect = 8e-026
Identities = 46/101 (45%), Positives = 63/101 (62%)
Frame = +2 / +2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGS 967
+GG++VPR S V+ NVWAI R A+W+ D F P RF + ++F+G +EF+PFGS
Sbjct: 218 IGGFAVPRDSTVIFNVWAIMRDPAAWERPDEFVPERFLGKAADKAVEFRGKDYEFIPFGS 397
Query: 968 GRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
GRR CPG + + +A L H F W LPDG+ ELD+
Sbjct: 398 GRRLCPGLPMAERVVPFVLASLLHAFEWRLPDGVLCDELDV 520
Score = 43.7 bits (89), Expect(2) = 1e-008
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2 / -2
Query: 1086 SSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
SSS PSGS C+S A+ + + PGH RRP+P G N
Sbjct: 516 SSSSHNTPSGSRHSNACSSDASTNGTTRSAIGKPGHSRRPDPNGMN 379
Score = 36.3 bits (73), Expect(2) = 1e-008
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2 / -2
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PP 790
G N+S H A R +AHTL +T E LGT PP
Sbjct: 318 GTNSSGLSHAAGSRMIAHTLKITVESLGTAKPP 220
Score = 28.6 bits (56), Expect(2) = 3.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1 / -1
Query: 907 LGREARRPERVGVLPRGAVAADGPHV 830
L +E R E VG LPR V D PHV
Sbjct: 337 LTQEPLRHELVGPLPRRRVPHDRPHV 260
Score = 25.4 bits (49), Expect(2) = 3.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 1090 HVQLRGLHAVGQRPVEAVRE 1031
HVQL HAV + P+E V++
Sbjct: 520 HVQLVAQHAVREPPLERVQQ 461
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 88.6 bits (187), Expect(3) = 9e-026
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA +D+KG F++ P
Sbjct: 421 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFP 600
Query: 959 FGSGRR 976
FGSGRR
Sbjct: 601 FGSGRR 618
Score = 36.8 bits (74), Expect(3) = 9e-026
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 518 DNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
D+IKA ++ + GT+T +E+AM +M +P + LQ E+ +
Sbjct: 154 DHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTI 294
Score = 29.9 bits (59), Expect(3) = 9e-026
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 313 VTQDDLHGLPYLKAVIKET 369
>gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0020D20f, mRNA sequence
Length = 675
Score = 72.1 bits (151), Expect(3) = 1e-025
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = +2 / +1
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+DFKG FE LPFGSGRR CPGT L + + L +A L H F W LP ++ L M +
Sbjct: 259 VDFKGRDFELLPFGSGRRMCPGTPLAVRIVHLMLASLLHRFQWRLPVDVEKKGLAMTEKL 438
Query: 1103 G 1105
G
Sbjct: 439 G 441
Score = 52.8 bits (109), Expect(3) = 1e-025
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
V GY+VP+G+R++VNVWAIG W + F P RF
Sbjct: 136 VQGYTVPKGTRLLVNVWAIGHDGKVWPEPXKFMPERF 246
Score = 36.3 bits (73), Expect(3) = 1e-010
Identities = 18/34 (52%), Positives = 18/34 (52%)
Frame = -2 / -2
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
G N S S H PMAHT T R PLGT P T
Sbjct: 236 GMNXSGSGHTLPSCPMAHTFTRRRVPLGTVYP*T 135
Score = 33.6 bits (67), Expect(3) = 1e-010
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -1 / -1
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAH 656
Q++ RR++PERLL D LE EL V L+++ +A+
Sbjct: 108 QQEWCRRMEPERLLHDGLEVLELSYVGLLNLLFRAY 1
Score = 33.6 bits (67), Expect(3) = 1e-010
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2 / -2
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P S M+S +GS K C A+ + S VPGH P+PKGR+
Sbjct: 440 PSFSVMASPFFSTSTGSLHWKRCNKDASMR*TMRTASGVPGHILLPDPKGRS 285
Score = 29.9 bits (59), Expect(3) = 1e-025
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 656 VGLDRNVNESDLDKLPFLKCVIKET 730
+G V ESD+ +L +L+ ++KET
Sbjct: 1 IGSKEQVEESDIGQLKYLQAIVKET 75
>gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e07 3', mRNA sequence
Length = 580
Score = 86.8 bits (183), Expect(3) = 2e-025
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 390 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 211
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 210 EEFGGLTFRKKKPLVLVPT 154
Score = 48.3 bits (99), Expect(2) = 7e-007
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 155 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 334
Query: 966 EPKGRN 949
PKGR+
Sbjct: 335 APKGRS 352
Score = 38.2 bits (77), Expect(3) = 2e-025
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGR 850
ET +GGY +P + +MVN WAIGR
Sbjct: 523 ETMRPIRLGGYDIPANTMLMVNAWAIGR 440
Score = 31.3 bits (62), Expect(2) = 0.35
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 193 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 285
Score = 29.5 bits (58), Expect(3) = 2e-025
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 854 RASWKDADAFRPSRF 898
RASWKD + F P RF
Sbjct: 435 RASWKDPEVFYPERF 391
Score = 25.4 bits (49), Expect(2) = 7e-007
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEAR 853
R G N S SFHEAR
Sbjct: 395 RSG*NTSGSFHEAR 436
Score = 22.6 bits (43), Expect(2) = 0.35
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRG 857
E R E +GVLPRG
Sbjct: 391 EPLRVEHLGVLPRG 432
>gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0012L22f, mRNA sequence
Length = 501
Score = 85.4 bits (180), Expect(2) = 1e-024
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +2 / -3
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+DF+G FE LPFG+GRR CPG L + L +A L H F WSLP ++ +DM D F
Sbjct: 391 IDFRGVDFELLPFGAGRRICPGMTLAARMVHLMLASLLHQFKWSLPVELERDGIDMEDKF 212
Query: 1103 GLTAPRATRLYAVPTP 1150
GLT + L V TP
Sbjct: 211 GLTLTKVVPLCIVATP 164
Score = 48.7 bits (100), Expect(2) = 1e-024
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 803 VPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+P+GSRV VNVWAIG + W + + F P RF
Sbjct: 499 IPKGSRVFVNVWAIGPDKDVWDEPEKFMPERF 404
Score = 37.3 bits (75), Expect(2) = 5e-007
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2 / +3
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLG 805
G N S S H + PMAHT T TREP G
Sbjct: 414 GINFSGSSHTSLSGPMAHTFTKTREPFG 497
Score = 36.8 bits (74), Expect(2) = 5e-007
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2 / +3
Query: 1158 LSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGH 979
+ GV T +VRP S MS +G L C + A+ + + +PG
Sbjct: 156 IQTGVATIQRGTTLVSVRPNLSSMSIPSLSSSTGRLHLN*CNNEASIKCTILAANVIPGQ 335
Query: 978 ERRPEPKGRN 949
RRP P GR+
Sbjct: 336 IRRPAPNGRS 365
>gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14g24 3', mRNA sequence
Length = 499
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 409 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 230
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 229 EEFGGLTFRKKKPLVLVPT 173
Score = 48.3 bits (99), Expect(2) = 5e-009
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 174 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 353
Query: 966 EPKGRN 949
PKGR+
Sbjct: 354 APKGRS 371
Score = 46.9 bits (96), Expect(2) = 1e-024
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2 / -1
Query: 821 VMVNVWAIGRHRASWKDADAFRPSRF 898
+MVN WAIGR ASWKD + F P RF
Sbjct: 487 LMVNAWAIGRDPASWKDPEVFYPXRF 410
Score = 32.7 bits (65), Expect(2) = 5e-009
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 410 EPXRVEHLGVLPRGRVPADRPRV 478
Score = 31.8 bits (63), Expect(2) = 8e-004
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTM 823
R G N S SFHEA P+AH T+
Sbjct: 414 RSG*NTSGSFHEAGSLPIAHAFTI 485
Score = 31.3 bits (62), Expect(2) = 8e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 212 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 304
>gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. vulgare cDNA clone HV06C16
5-PRIME, mRNA sequence
Length = 477
Score = 86.8 bits (183), Expect(2) = 1e-024
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 396 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 217
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 216 EEFGGLTFRKKKPLVLVPT 160
Score = 48.3 bits (99), Expect(2) = 7e-009
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 161 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 340
Query: 966 EPKGRN 949
PKGR+
Sbjct: 341 APKGRS 358
Score = 46.9 bits (96), Expect(2) = 1e-024
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2 / -1
Query: 821 VMVNVWAIGRHRASWKDADAFRPSRF 898
+MVN WAIGR ASWKD + F P RF
Sbjct: 474 LMVNAWAIGRDPASWKDPEVFYPERF 397
Score = 32.2 bits (64), Expect(2) = 7e-009
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 397 EPLRVEHLGVLPRGRVPADRPRV 465
Score = 31.8 bits (63), Expect(2) = 8e-004
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTM 823
R G N S SFHEA P+AH T+
Sbjct: 401 RSG*NTSGSFHEAGSLPIAHAFTI 472
Score = 31.3 bits (62), Expect(2) = 8e-004
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 199 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 291
>gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. vulgare cDNA clone HV05M12
3-PRIME, mRNA sequence
Length = 467
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = +2 / -2
Query: 929 FKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGL 1108
+KG FE+LPFG+GRR CPG GL LELAV +L + F+WSLP G + ELDM G+
Sbjct: 283 YKGSRFEYLPFGTGRRKCPGDTFGLATLELAVTRLLYYFDWSLPAGTRVDELDMETSVGI 104
Query: 1109 TAPRATRLYAVPTP 1150
R +L+ V TP
Sbjct: 103 ATRRKNQLHLVATP 62
Score = 40.0 bits (81), Expect = 0.030
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = -2 / +3
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGR 952
P MSSS +P+G Q K S TASSS P PGH P P G+
Sbjct: 108 PTLVSMSSSSTRVPAGRLQSK**RSRVTASSSVASPKVSPGHFLLPVPNGK 260
Score = 39.6 bits (80), Expect(2) = 1e-024
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -2
Query: 809 RGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
R +RV+VN WA+ R W++A+ F P RF
Sbjct: 391 RCTRVLVNAWAMARSPEYWENAEEFMPERF 302
>gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_H10 5', mRNA sequence
Length = 537
Score = 75.3 bits (158), Expect(2) = 2e-024
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D + ++ D++ G +T ++EWAMAE++ +P ++LQ+EL +VVG DR + E+D
Sbjct: 109 LSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETD 288
Query: 689 LDKLPFLKCVIKET 730
LP+L V+KE+
Sbjct: 289 FQNLPYLMAVVKES 330
Score = 57.9 bits (120), Expect(2) = 2e-024
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W FRP RF E
Sbjct: 391 VGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEE 510
Score = 45.5 bits (93), Expect(2) = 2e-011
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
Q +R RRVQ E LLDD + ++++V L H V A D+ ELLLQ
Sbjct: 363 QHERRRRVQTEGLLDDGHQVRQVLEVGLGHDAVTADDIVELLLQ 232
Score = 43.7 bits (89), Expect(2) = 2e-011
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 500 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 390
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +2
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 395 AATTSPRVPTSW*TCG 442
Score = 23.5 bits (45), Expect(2) = 2.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 426 HGERVGGGPRPQGVE 470
>gb|BJ460252.1|BJ460252 BJ460252 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40b01 3', mRNA sequence
Length = 592
Score = 99.6 bits (211), Expect(2) = 4e-024
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG E LPFG+GRR CP LGL ++L +A L HG+ W LPDGM EL M + F
Sbjct: 438 VDVKGHDLELLPFGAGRRMCPAHGLGLKMVQLVLANLLHGYAWRLPDGMAAEELSMEEKF 259
Query: 1103 GLTAPRATRLYAVPTPRLNCPLY 1171
G++ R L+A+P P+L LY
Sbjct: 258 GISVSRMHHLHAIPEPKLMDHLY 190
Score = 48.7 bits (100), Expect(2) = 2e-008
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = -2 / +2
Query: 1158 LSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGH 979
+S G G A R P S M SS MPSGS PC+ +A+ S + P GH
Sbjct: 203 ISLGSGIAWR*CMRDTDMPNFSSMLSSSAAMPSGSLHA*PCSKFASTS*TILSPRPWAGH 382
Query: 978 ERRPEPKG 955
RP PKG
Sbjct: 383 ILRPAPKG 406
Score = 32.7 bits (65), Expect(2) = 4e-024
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 806 PRGSRVMVNVWAIGRHRASWKDADA 880
P G+RV+VNV AIGR A W + A
Sbjct: 546 PVGTRVLVNVXAIGRDPAVWGETAA 472
Score = 32.2 bits (64), Expect = 6.6
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1 / +1
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVREL 1028
G R +E AR A+ + H QL HAVG+ P AV+++
Sbjct: 211 GLRDSMEMMHARHRYAKLLLHAQLLSRHAVGESPRIAVQQV 333
Score = 30.4 bits (60), Expect(2) = 2e-008
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 879 ASASFHEARWRPMAHTLTMTREPLG 805
A+ S H A RP+A TLT TR P G
Sbjct: 473 AAVSPHTAGSRPIAXTLTSTRVPTG 547
>gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001G02f, mRNA sequence
Length = 617
Score = 75.3 bits (158), Expect(2) = 7e-024
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D + ++ D++ G +T ++EWAMAE++ +P ++LQ+EL +VVG DR + E+D
Sbjct: 166 LSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETD 345
Query: 689 LDKLPFLKCVIKET 730
LP+L V+KE+
Sbjct: 346 FQNLPYLMAVVKES 387
Score = 56.1 bits (116), Expect(2) = 7e-024
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
VGGY++P+G+ VMVNVWA+ R W F+P RF E
Sbjct: 448 VGGYNIPKGANVMVNVWAVARDPNVWSSPLEFKPERFLEE 567
Score = 45.5 bits (93), Expect(2) = 2e-011
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
Q +R RRVQ E LLDD + ++++V L H V A D+ ELLLQ
Sbjct: 420 QHERRRRVQTEGLLDDGHQVRQVLEVGLGHDAVTADDIVELLLQ 289
Score = 43.7 bits (89), Expect(2) = 2e-011
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = -2 / -1
Query: 897 KRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
KR G N+S H R AHT TMT PLG *PPT
Sbjct: 557 KRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPT 447
Score = 27.6 bits (54), Expect(2) = 0.85
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +2
Query: 792 AATPCPGAPASWSTCG 839
AAT P P SW TCG
Sbjct: 452 AATTSPRVPTSW*TCG 499
Score = 24.9 bits (48), Expect(2) = 0.85
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 823 HGQRVGHRPPPRLVE 867
HG+RVG P P+ VE
Sbjct: 483 HGERVGGGPRPQCVE 527
>gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A16
5-PRIME, mRNA sequence
Length = 469
Score = 86.8 bits (183), Expect(2) = 9e-024
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 396 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 217
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 216 EEFGGLTFRKKKPLVLVPT 160
Score = 48.3 bits (99), Expect(2) = 7e-009
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 161 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 340
Query: 966 EPKGRN 949
PKGR+
Sbjct: 341 APKGRS 358
Score = 44.1 bits (90), Expect(2) = 9e-024
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 827 VNVWAIGRHRASWKDADAFRPSRF 898
VN WAIGR ASWKD + F P RF
Sbjct: 468 VNAWAIGRDPASWKDPEVFYPERF 397
Score = 32.2 bits (64), Expect(2) = 7e-009
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 397 EPLRVEHLGVLPRGRVPADRPRV 465
Score = 31.3 bits (62), Expect(2) = 0.001
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLT 826
R G N S SFHEA P+AH T
Sbjct: 401 RSG*NTSGSFHEAGSLPIAHAFT 469
Score = 31.3 bits (62), Expect(2) = 0.001
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 199 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 291
>gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. vulgare cDNA clone HI14J11
5-PRIME, mRNA sequence
Length = 595
Score = 58.8 bits (122), Expect(3) = 1e-023
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2 / +2
Query: 536 IMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKC 715
+MD GG T + I WAM E++ P L ++Q E+ V G + D+ KL +L+
Sbjct: 2 LMDTFIGGNHTSSVTINWAMTELIRHPRVLSKVQGEIRAVGGRSDRMQHDDMPKLQYLRM 181
Query: 716 VIKET 730
V+KET
Sbjct: 182 VVKET 196
Score = 46.0 bits (94), Expect(3) = 1e-023
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGL 1003
+DF G FE LPFG+GRR CPG A+ +
Sbjct: 383 IDFSGAHFELLPFGTGRRVCPGLAMAV 463
Score = 43.2 bits (88), Expect(3) = 1e-023
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKD 871
ET V GY +P ++++VN WAIGR + W+D
Sbjct: 236 ETIRRIQVAGYDIPAKTKIIVNTWAIGRDPSVWRD 340
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +2 / +1
Query: 920 GLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDV 1099
G + G F L F P G +E +A + + FNW LPDG++ G
Sbjct: 379 GYRLQRGAFRALAFWHRTPGVPRAGHGRVHIEFILANMLYCFNWKLPDGVRSXGCQCGGG 558
Query: 1100 FGLTAP 1117
G P
Sbjct: 559 RGADIP 576
Score = 30.4 bits (60), Expect(2) = 1e-005
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +1
Query: 823 HGQRVGHRPPPRLVEGRRR 879
H + VG+RP P+ VEGR R
Sbjct: 292 HREHVGYRPGPQRVEGRSR 348
>gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. vulgare cDNA clone HV10M21
3-PRIME, mRNA sequence
Length = 528
Score = 85.4 bits (180), Expect(2) = 1e-023
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +2 / -1
Query: 803 VPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSC 982
+P G+RV+VN AI R +SW+ A+ F P RF G AA +D+KG F +LPFG+GRR C
Sbjct: 528 IPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRIC 349
Query: 983 PG 988
PG
Sbjct: 348 PG 343
Score = 45.1 bits (92), Expect(2) = 1e-023
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2 / -2
Query: 962 GSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAV 1141
G G P + A+E+ +A L + F+W LP G + M + FGLT R +L V
Sbjct: 368 GRGGGYAPV*TSPIAAIEIMLANLVYHFDWKLPPGSAERGISMTESFGLTVHRKDKLLLV 189
Query: 1142 P 1144
P
Sbjct: 188 P 186
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 5', mRNA sequence
Length = 688
Score = 110 bits (235), Expect = 2e-023
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F+FLP
Sbjct: 470 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLP 649
Query: 959 FGSGRRSCPGTAL 997
FG+GRR CPG L
Sbjct: 650 FGAGRRMCPGMNL 688
>gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. vulgare cDNA clone HV11L11
5-PRIME, mRNA sequence
Length = 495
Score = 61.1 bits (127), Expect(3) = 2e-023
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR ASWKD + F P RF
Sbjct: 306 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 437
Score = 57.9 bits (120), Expect(3) = 2e-023
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +3
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 39 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 218
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 219 SDMPKLKYLRMVLSET 266
Score = 38.2 bits (77), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SFHEA P+AH T+ G *PP+
Sbjct: 433 RSG*NTSGSFHEAGSLPIAHAFTINMVLAGMS*PPS 326
Score = 32.2 bits (64), Expect = 6.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -2
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 437 EPLRVEHLGVLPRGRVPADRPRV 369
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGS 967
E +DF GG +E LPFG+
Sbjct: 438 EELDVDFNGGHYELLPFGA 494
>gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088J02f, mRNA sequence
Length = 624
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/97 (37%), Positives = 49/97 (50%)
Frame = +2 / +2
Query: 584 EWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKETXXXXXXXXXXX 763
EWAMAE++ +P + + E+ V E DL +L +L+ VI ET
Sbjct: 2 EWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQDLTELAYLRLVIWETLRLHPPIPLLF 181
Query: 764 XETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDA 874
E C V GY VPRG++V+VN WA+GR W A
Sbjct: 182 RECQKSCQVLGYDVPRGTQVLVNAWALGRDERYWHHA 292
Score = 51.0 bits (105), Expect(2) = 4e-023
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2 / +2
Query: 917 AGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
A +D F FLPFG+GRR CP A G+ +EL +A L F+W
Sbjct: 329 AAVDLGAVDFVFLPFGAGRRMCPXMAFGVANVELPLASLLXHFDW 463
Score = 34.5 bits (69), Expect = 1.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 1050 QLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
Q K + A+ SS+ P+A+ GH RP P GRN
Sbjct: 462 QSKXKSKLASGSSTLATPNAIXGHILRPAPNGRN 361
>gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40p23 3', mRNA sequence
Length = 461
Score = 106 bits (227), Expect = 2e-022
Identities = 43/109 (39%), Positives = 59/109 (54%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLP 958
+C V G +P G RV++N WA+ R SW+ AD F P RF G AA + +KG F P
Sbjct: 370 ECNVNGXIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAAXMXYKGNDFSXXP 191
Query: 959 FGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFG 1105
FG+GRR CPG + +E+ +A L N LP + + M + FG
Sbjct: 190 FGTGRRICPGINFAIATIEIMLANLIXHXNXXLPTELMEDGISMTEXFG 44
>gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c24 5', mRNA sequence
Length = 489
Score = 57.9 bits (120), Expect(3) = 5e-022
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +1
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 13 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 192
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 193 SDMPKLKYLRMVLSET 240
Score = 42.3 bits (86), Expect(3) = 5e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCP 985
E +DF GG +E LPFG+GRR CP
Sbjct: 413 EELDVDFNGGHYELLPFGAGRRICP 487
Score = 42.3 bits (86), Expect(3) = 5e-022
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 830 NVWAIGRHRASWKDADAFRPSRF 898
N WAIGR ASWKD + F P RF
Sbjct: 344 NAWAIGRDPASWKDPEVFYPERF 412
Score = 32.2 bits (64), Expect(3) = 0.007
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E R E +GVLPRG V AD P V
Sbjct: 412 EPLRVEHLGVLPRGRVPADRPRV 344
Score = 25.8 bits (50), Expect(3) = 0.007
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 987 PGHERRPEPKGRN 949
PG RRP PKGR+
Sbjct: 489 PGQIRRPAPKGRS 451
Score = 21.7 bits (41), Expect(3) = 0.007
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1 / -1
Query: 556 AKHHVHDDSLDIVAREP 506
A HH H D+VA +P
Sbjct: 348 AFHHQHGVGRDVVAPQP 298
>gb|BE060200.3|BE060200 HVSMEg0011E01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011E01f, mRNA sequence
Length = 556
Score = 105 bits (223), Expect = 8e-022
Identities = 43/92 (46%), Positives = 54/92 (58%)
Frame = +2 / +1
Query: 881 FRPSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLP 1060
FRP+RF P G A +D KGG F +PFG+GRR C G + GL + + A L H F+W LP
Sbjct: 10 FRPARFLPGGTHADVDVKGGDFGLIPFGAGRRICAGLSWGLRVVTVTTATLVHSFDWELP 189
Query: 1061 DGMKPSELDMGDVFGLTAPRATRLYAVPTPRL 1156
G P +L+M + F L RA L P PRL
Sbjct: 190 AGQTPGKLNMEEAFSLLLQRAVPLMVHPVPRL 285
Score = 48.7 bits (100), Expect = 7e-005
Identities = 27/72 (37%), Positives = 31/72 (43%)
Frame = -2 / -3
Query: 1170 YKGQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSA 991
Y S G G S AR + R K S M S G P+GS Q C S A + + RP
Sbjct: 299 YADGSSLGTGWTMSGTARCSSREKASSMLSLPGVWPAGSSQSNECTSVAVVTVTTRRPQL 120
Query: 990 VPGHERRPEPKG 955
P RP P G
Sbjct: 119 RPAQILRPAPNG 84
>gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017K07f, mRNA sequence
Length = 763
Score = 61.1 bits (127), Expect(3) = 1e-021
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2 / +1
Query: 524 IKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLP 703
I A ++ GTET +S EWAM+ +++ P LR+ Q E+ VG R V D+ +L
Sbjct: 166 ITAPCANLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVGTCRLVTADDVPRLA 345
Query: 704 FLKCVIKET 730
+L+C++ ET
Sbjct: 346 YLQCIVSET 372
Score = 54.7 bits (113), Expect(3) = 1e-021
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+++ DC VGGY+VP G+ +MVN +AI R A+W+ F P RF
Sbjct: 412 QSSADCKVGGYNVPSGTMLMVNAYAIHRDPAAWERPLEFVPERF 543
Score = 41.8 bits (85), Expect(3) = 7e-012
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / -3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R G N+S H A R MA+ T++ PLGT *PPT QS
Sbjct: 539 RSGTNSSGRSHAAGSRWMAYAFTISIVPLGTL*PPTLQS 423
Score = 40.5 bits (82), Expect(3) = 7e-012
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -1 / -2
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQ 623
Q+ R RRVQP+RL DAL+ GE V H P AH +L L+ Q
Sbjct: 405 QQHRRRRVQPQRLAHDALQVGEPGHVVGGHQPAGAHGHVDLGLRLPQ 265
Score = 25.8 bits (50), Expect(3) = 1e-021
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 953 LPFGSGRRSCPG 988
+PFG G R CPG
Sbjct: 574 IPFGMGLRRCPG 609
Score = 25.4 bits (49), Expect(3) = 7e-012
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 1002 RPSAVPGHERRPEPKG 955
R + PGH RRP P G
Sbjct: 623 RQVSPPGHRRRPIPNG 576
>gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001B07f, mRNA sequence
Length = 1300
Score = 74.4 bits (156), Expect(2) = 1e-021
Identities = 26/72 (36%), Positives = 48/72 (66%)
Frame = +2 / +3
Query: 515 RDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLD 694
R + +++ D+ GT+T ++ +EWAMAE++ +P + R ++EL V+G V ESD+
Sbjct: 126 RQTLLSLLSDLFSAGTDTSSATVEWAMAELLLNPSSMSRAREELDQVIGSKEQVEESDIG 305
Query: 695 KLPFLKCVIKET 730
+L +L+ ++KET
Sbjct: 306 QLKYLQAIVKET 341
Score = 49.6 bits (102), Expect(2) = 1e-021
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
V GY+V +G+R++VNVWAIG W + + F P +F
Sbjct: 402 VQGYTVAKGTRLLVNVWAIGHDXKVWPEPEKFMPEKF 512
Score = 36.3 bits (73), Expect(2) = 1e-005
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGEL 641
Q++ RR++PERLL D LE EL V L+++ +A+ + EL
Sbjct: 374 QQEWCRRMEPERLLHDGLEVLELSYVGLLNLLFRAYHLVEL 252
Score = 33.1 bits (66), Expect(2) = 1e-005
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -2 / -1
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
G N S S H PMAHT T R PL T P T
Sbjct: 502 GMNFSGSGHTLXSCPMAHTFTRRRVPLATVYP*T 401
>gb|BF618482.2|BF618482 HVSMEc0005N02f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0005N02f, mRNA sequence
Length = 590
Score = 81.7 bits (172), Expect(2) = 1e-021
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +2 / -1
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
++F GG +EFLPFG+GRR CPG A+G+ E +A L FNW+LP G++ ++ + +
Sbjct: 458 VEFNGGQYEFLPFGAGRRICPGLAMGVANTEFILANLL*CFNWALPHGIRTEDVGVEEFG 279
Query: 1103 GLTAPRATRLYAVPT 1147
GLT + L VPT
Sbjct: 278 GLTFRKKKPLVLVPT 234
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +1
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 235 VGTSTSGFFFRKVRPPNSSTPTSSVLIP*GSAQLKH*SKLARMNSVLATPMASPGQIRRP 414
Query: 966 EPKGRN 949
PKG+N
Sbjct: 415 APKGKN 432
Score = 42.3 bits (86), Expect(2) = 1e-021
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2 / -1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
VGGY + + +MVN AIGR ASWK + F RF
Sbjct: 581 VGGYYISANTMLMVNGLAIGRTPASWKAPEVFTSERF 471
>gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008D16f, mRNA sequence
Length = 622
Score = 81.3 bits (171), Expect(2) = 2e-021
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+T NIK +I D+ GT+T + +EWAMAEM+++P + R Q+E+ VVG R + ESD
Sbjct: 151 ITEVNIKGLIFDMFTAGTDTSSIIVEWAMAEMINNPSIMARAQEEMDRVVGRGRRLEESD 330
Query: 689 LDKLPFLKCVIKE 727
+ LP+L+ + KE
Sbjct: 331 IANLPYLQAICKE 369
Score = 41.8 bits (85), Expect(2) = 2e-021
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2 / +3
Query: 821 VMVNVWAIGRHRASWKDADAFRPSRF 898
V N+WAIGR A+W+D FRP RF
Sbjct: 465 VPYNIWAIGRKPAAWEDPREFRPERF 542
Score = 33.1 bits (66), Expect(2) = 2e-004
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 898 EARRPERVGVLPRGAVAADGPHV 830
E RPE GVLPR AADGP V
Sbjct: 542 EPFRPELPGVLPRRRFAADGPDV 474
Score = 31.8 bits (63), Expect(2) = 2e-004
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1 / -2
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLL 635
Q +R R V+ RLL + L+ GE+ V L+ A D LLL
Sbjct: 405 QAERRRGVEAHRLLANGLQVGEVGDVGLLEPAAAADDTVHLLL 277
>gb|BE214174.2|BE214174 HV_CEb0002I14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002I14f, mRNA sequence
Length = 708
Score = 79.9 bits (168), Expect(2) = 3e-021
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
+G + +G EF+PFG+GR CPG LEL +A L + F+W++P G P +
Sbjct: 152 QGTSVEYSSQGPHMEFVPFGAGRTQCPGALFATTMLELVLANLLYHFDWAIPGGESPETM 331
Query: 1085 DMGDVFGLTAPRATRLY 1135
DMG+VFG+ +RL+
Sbjct: 332 DMGEVFGIIVHTRSRLH 382
Score = 46.4 bits (95), Expect = 4e-004
Identities = 23/52 (44%), Positives = 26/52 (50%)
Frame = -2 / -1
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P TSPMS G P G Q K + A+ SSS + PGH RP P G N
Sbjct: 351 PNTSPMSIVSGLSPPGIAQSK*YSRLASTSSSMVVANRAPGHCVRPAPNGTN 196
Score = 42.8 bits (87), Expect(2) = 3e-021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASW 865
+C V GY +P+G+ VM+N +A+GR A W
Sbjct: 29 NCRVMGYDIPKGTAVMINAFAVGRDPAHW 115
Score = 26.7 bits (52), Expect(2) = 9.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1 / -3
Query: 1135 VEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
V+P + +A+ +AHV RPV+ ++++G E
Sbjct: 382 VQPGPSVHNDAKHLAHVHRLRAFPTRNRPVKVIQQVGQHE 263
Score = 22.1 bits (42), Expect(2) = 9.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2 / -2
Query: 1041 PCASWATASSSAYRPSAVPGHERRPEP 961
PCA+ A+ + + ++ G RRP P
Sbjct: 194 PCAALASCTPRSCLGTSPAGTRRRPLP 114
>gb|BE213800.1|BE213800 HV_CEb0001F01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001F01f, mRNA sequence
Length = 956
Score = 78.0 bits (164), Expect(2) = 4e-021
Identities = 31/101 (30%), Positives = 57/101 (56%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D ++A++ D+ G T A+ IEW M +++ +P+ +R++++EL V+G + ESD
Sbjct: 189 LSHDVMRALLSDLYGAGASTTAALIEWGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESD 368
Query: 689 LDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPR 811
+ +LP+L+ V KE + D V GY +P+
Sbjct: 369 IGRLPYLQAVAKEILRLRMVVPLVPRKAEADIEVNGYRIPK 491
Score = 44.1 bits (90), Expect(2) = 4e-021
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2 / +2
Query: 806 PRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGG 940
P + V++N WAI R+ +W D D F P RF G G +++ G
Sbjct: 485 P*STNVILNAWAINRNADAWSDPDKFVPERFIGAG*TGGRNYQLG 619
>gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20l03 3', mRNA sequence
Length = 557
Score = 76.2 bits (160), Expect(2) = 4e-021
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +2 / -1
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
L LTRDNIK I+MD GG +T A W M+E+M +P +R+ Q E+ VV V+E
Sbjct: 428 LALTRDNIKGILMDTFTGGIDTCAVTTIWIMSELMRNPRVMRKAQSEVRAVVRNKSRVDE 249
Query: 683 SDLDKLPFLKCVIKE 727
D L +LK V+KE
Sbjct: 248 EDAQGLKYLKMVVKE 204
Score = 46.0 bits (94), Expect(2) = 4e-021
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRH 853
ET C + GYSVP G+R+ V+VWA+GR+
Sbjct: 161 ETMQSCEIAGYSVPAGTRIHVDVWAMGRN 75
>gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. vulgare cDNA clone HT04F04
5-PRIME, mRNA sequence
Length = 399
Score = 102 bits (218), Expect = 4e-021
Identities = 44/119 (36%), Positives = 68/119 (57%)
Frame = +2 / +3
Query: 518 DNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDK 697
D +KAII+DV G+ET + +EWA++E++++P +++ E+ V+E L +
Sbjct: 12 DAVKAIILDVFAAGSETTTTTLEWAISELINNPKAMQKATTEVRQAFHGHGAVSEDALSE 191
Query: 698 LPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDA 874
LP+L+ VI+ET E C V GY VPRG++V+VN WA+ R W DA
Sbjct: 192 LPYLRIVIRETLRLHAPLPLLFRECQEPCQVQGYDVPRGTQVLVNGWALCRDERYWPDA 368
>gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0015E18f, mRNA sequence
Length = 733
Score = 81.3 bits (171), Expect(2) = 7e-021
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E + F GG +E LPFG GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 457 EELDVHFYGGHYELLPFGVGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 278
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 277 EEFGGLTFRKKKPLVLVPT 221
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 222 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 401
Query: 966 EPKGRN 949
PKGR+
Sbjct: 402 TPKGRS 419
Score = 40.0 bits (81), Expect(2) = 7e-021
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2 / -1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAF 883
+G Y + + M NVW IGR+ A WKD F
Sbjct: 568 LGDYIISANTMYMANVWVIGRYPALWKDPQVF 473
Score = 31.3 bits (62), Expect(2) = 0.61
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 1108 EAEDVAHVQLRGLHAVGQRPVEAVRELGDGE 1016
EA + H + H + +RPVEAV ++G E
Sbjct: 260 EAPKLLHAHILAPHPLRERPVEAVEQVGQDE 352
Score = 27.2 bits (53), Expect(2) = 2e-007
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / +3
Query: 882 NASASFHEARWRPMAHTLTM 823
N SFH+A + P+ HTL M
Sbjct: 474 NT*GSFHKAGYLPITHTLAM 533
Score = 24.9 bits (48), Expect(2) = 0.61
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 883 ERVGVLPRGAVAADGPHV 830
E + VLP+G V + PHV
Sbjct: 473 EHLRVLPQGRVPTNNPHV 526
>gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021C04f, mRNA sequence
Length = 706
Score = 68.9 bits (144), Expect(3) = 8e-021
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 145 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 324
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 325 LERLPYLQSVVKET 366
Score = 41.4 bits (84), Expect(2) = 0.004
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 396 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 268
Score = 40.5 bits (82), Expect(3) = 8e-021
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGF 1045
E ++ G F F+PFG RRSCPG L L + + + L F
Sbjct: 545 EEKSVEAHGNDFRFVPFGVRRRSCPGIILALPIIGITLGPLVQKF 679
Score = 29.0 bits (57), Expect(3) = 8e-021
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVW 838
D + GY +P S+++VN W
Sbjct: 418 DAKLAGYDIPAESKILVNAW 477
Score = 22.6 bits (43), Expect(2) = 0.004
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / -2
Query: 990 VPGHERRPEPKGRN 949
+PG RR PKG N
Sbjct: 624 IPGQLRRRTPKGTN 583
>gb|AV836988.1|AV836988 AV836988 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd21h06, mRNA sequence
Length = 504
Score = 100 bits (212), Expect = 3e-020
Identities = 44/87 (50%), Positives = 53/87 (60%)
Frame = +2 / -3
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D G E LPFG+GRR CPG LGL +++ +A L HGF W LPDGM +L M +VF
Sbjct: 466 VDVVGQDMELLPFGAGRRMCPGYNLGLKVVQVCLANLLHGFVWRLPDGMAAEQLSMDEVF 287
Query: 1103 GLTAPRATRLYAVPTPRLNCPLY*RHA 1183
GLT R L AV P+L LY HA
Sbjct: 286 GLTTSRKFPLEAVLEPKLPAHLYTLHA 206
Score = 51.9 bits (107), Expect = 8e-006
Identities = 28/67 (41%), Positives = 33/67 (49%)
Frame = -2 / +3
Query: 1155 SRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHE 976
S G TA R V P TS M S +PSGS Q KP + +A + + P PGH
Sbjct: 234 SLGSNTASRGNLRDVVSPNTSSMLSCSAAIPSGSLQTKPWSRFARHTWTTLSPRL*PGHI 413
Query: 975 RRPEPKG 955
RRP P G
Sbjct: 414 RRPAPNG 434
Score = 46.9 bits (96), Expect = 3e-004
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = -1 / +2
Query: 1180 MASVQGAVEPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVREL 1028
M V+ + E G +H ++ ARRGE E + H QL H+VG+ P EAV ++
Sbjct: 209 MQCVEVSGELGLQHSLQGELARRGEPEHLVHAQLLRRHSVGEPPDEAVEQI 361
>gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003O04f, mRNA sequence
Length = 507
Score = 79.4 bits (167), Expect(2) = 4e-020
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +2 / +1
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
++L R+ +KA D++ GGTE+ A +EWA++E++ P+ L + +EL VVG R V E
Sbjct: 145 VKLNREGVKAFTQDLIAGGTESSAVTVEWALSELLKKPEVLAKATEELDRVVGRGRWVTE 324
Query: 683 SDLDKLPFLKCVIKET 730
D+ LP++ ++KET
Sbjct: 325 KDMPSLPYVDAIVKET 372
Score = 39.1 bits (79), Expect(2) = 4e-020
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGR 850
D + GY +P G+RV+V VW+IGR
Sbjct: 424 DTSINGYDIPAGTRVLVMVWSIGR 495
>gb|BF259325.3|BF259325 HVSMEf0019E17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019E17f, mRNA sequence
Length = 850
Score = 42.8 bits (87), Expect(5) = 1e-019
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +2
Query: 296 QGINXXXXXXXXXXXXFIDKIIDEHVRRGKNP 391
QG N FIDKIIDEH+ RGKNP
Sbjct: 47 QGTNVRARAARAALDEFIDKIIDEHMERGKNP 142
Score = 39.1 bits (79), Expect(5) = 1e-019
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 557 GTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
G ETVAS I+WAM + HS DL L +EL
Sbjct: 292 GRETVASVIDWAMKYINHSLQDLLLLHEEL 381
Score = 36.3 bits (73), Expect = 0.38
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2 / -2
Query: 390 GFFPRLTCSSMILSMNXXXXXXXXXXXRLMP 298
GFFP CSSMILSMN L+P
Sbjct: 141 GFFPLSMCSSMILSMNSSRAARAARARTLVP 49
Score = 31.3 bits (62), Expect(5) = 1e-019
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 491 LHNTLRLTRDNIKAI 535
L NTLRLTRDNIK I
Sbjct: 224 LQNTLRLTRDNIKPI 268
Score = 30.9 bits (61), Expect(5) = 1e-019
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 248 AFNVVDFLPWLSWMD 292
AF++ DF+PWL W D
Sbjct: 2 AFSLGDFIPWLGWAD 46
Score = 24.0 bits (46), Expect(5) = 1e-019
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 533 IIMDVMFGGT 562
+IMD+MFGGT
Sbjct: 267 LIMDLMFGGT 296
>gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd22b21, mRNA
sequence
Length = 521
Score = 91.3 bits (193), Expect(2) = 1e-019
Identities = 37/73 (50%), Positives = 55/73 (75%)
Frame = +2 / +2
Query: 512 TRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDL 691
T N+KA++MD++ GGTET ++ +EWAMAEM+ + LR++Q+EL +VVG+D V ES L
Sbjct: 236 TMTNVKALLMDMVVGGTETTSNTVEWAMAEMLQNLRILRKVQEELDEVVGIDGVVEESHL 415
Query: 692 DKLPFLKCVIKET 730
+L +L V+KET
Sbjct: 416 PQLHYLHLVVKET 454
Score = 40.0 bits (81), Expect(2) = 2e-004
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -1 / -2
Query: 757 QRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQ 623
+R RR+QPERLLD ++ +L ++R +H V + + E LL Q
Sbjct: 481 ERQRRMQPERLLDHQMQIVQLREMRFLHHAVDPNHLVEFLLHLPQ 347
Score = 28.6 bits (56), Expect(2) = 1e-019
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2 / +2
Query: 254 NVVDFLPWLSWMDLQGINXXXXXXXXXXXXFIDKIIDEHV 373
NV DF P L+ DLQGI +II++ V
Sbjct: 23 NVSDFFPALAPFDLQGIRKKSDALKERFDNIFGRIIEKRV 142
Score = 28.1 bits (55), Expect(2) = 2e-004
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2 / -3
Query: 372 TCSSMILSMNXXXXXXXXXXXRLMPCRSIQLSHGRKSTTLKA 247
T SMIL +PCRS S G+KS TL A
Sbjct: 141 TLFSMILPKMLSNRSLSASDFFRIPCRSNGASAGKKSDTLGA 16
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 44.6 bits (91), Expect(4) = 1e-019
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LTR+ +KA ++ + GT+T +E+AMA +M +PD + +LQ E+ + +++ D
Sbjct: 348 LTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVTED 527
Score = 38.6 bits (78), Expect(4) = 1e-019
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 950 FLPFGSGRRSCPGTALGLYALELAVAQLAHGF 1045
+LPFG+GRR CPG L + A+ + + L + F
Sbjct: 798 YLPFGTGRRYCPGINLRIAAIGIMLTNLGYQF 893
Score = 35.0 bits (70), Expect(4) = 1e-019
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 857 ASWKDADAFRPSRFTPEGEAAGLDFKGGCF 946
A+W+ A+ P RF G AA +D+KG F
Sbjct: 704 ANWESAEEVLPERFMQGGMAAAMDYKGNGF 793
Score = 33.1 bits (66), Expect(4) = 1e-019
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMV 829
DCV+ GY++P G+RV+V
Sbjct: 624 DCVINGYTIPSGTRVIV 674
Score = 28.1 bits (55), Expect(3) = 0.011
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
++R R V+PE LLD L G++V++ L
Sbjct: 602 QKRRRHVKPECLLDHGL*VGQMVKIVL 522
Score = 23.5 bits (45), Expect(3) = 0.011
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 831 LTMTREPLGTE*PPTTQS 778
LTMTR P G *P TQS
Sbjct: 676 LTMTRVPDGMV*PFMTQS 623
Score = 23.5 bits (45), Expect(3) = 0.011
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 990 VPGHERRPEPKGR 952
+PG RP PKGR
Sbjct: 838 IPGQYLRPVPKGR 800
>gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0020I08f, mRNA sequence
Length = 408
Score = 97.3 bits (206), Expect = 2e-019
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +2 / +3
Query: 908 GEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELD 1087
G+ DFKG F+FLPFG+GR CPG + +E+ +A L + ++W LP GM+ +LD
Sbjct: 24 GDIVSPDFKGRDFQFLPFGAGRMMCPGINFAMATVEIMLANLVYCYDWELPGGMRQEDLD 203
Query: 1088 MGDVFGLTAPRATRLYAVPTPR 1153
M DVFG+T R +L+ VP R
Sbjct: 204 MTDVFGMTMRRKEKLFLVPISR 269
Score = 42.8 bits (87), Expect = 0.004
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -2 / -3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
+GT + R V P TS +S S +P GS Q A+ S+ +PGH RP
Sbjct: 262 IGTRNNFSFRRIVMPNTSVISRSSCRIPPGSSQS*Q*TRLASMISTVAIAKFIPGHIIRP 83
Query: 966 EPKGRN 949
P GRN
Sbjct: 82 APNGRN 65
>gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. vulgare cDNA clone HV02F12
3-PRIME, mRNA sequence
Length = 643
Score = 68.9 bits (144), Expect(2) = 2e-019
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / -2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 396 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 217
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 216 LERLPYLQSVVKET 175
Score = 47.3 bits (97), Expect(2) = 2e-019
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
D + GY +P S+++VN W + W AD FRP RF
Sbjct: 123 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERF 4
Score = 41.4 bits (84), Expect = 0.012
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / +1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 145 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 273
>gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. vulgare cDNA clone HM05O04
3-PRIME, mRNA sequence
Length = 604
Score = 67.0 bits (140), Expect(2) = 3e-019
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E + +DFKG FE PFG+GRR CP ++ +E +A L + F W+LP+GM S +
Sbjct: 366 EMSKIDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTLPEGMVVSMEEE 187
Query: 1091 GDVFGL 1108
G + L
Sbjct: 186 GKLVPL 169
Score = 48.7 bits (100), Expect(2) = 3e-019
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKD 871
E D +GGY VP +R+ VN WAIGR SW D
Sbjct: 501 EAMRDIQIGGYDVPAKTRIYVNAWAIGRDPTSWPD 397
Score = 25.8 bits (50), Expect(2) = 9.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2 / +2
Query: 846 PMAHTLTMTREPLGTE*PPTTQS 778
PMAH T R GT *PP S
Sbjct: 422 PMAHAFT*IRVLAGTS*PPIWMS 490
Score = 25.8 bits (50), Expect(2) = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 1069 HAVGQRPVEAVRELGDGE 1016
H + +RP+EAV ++G GE
Sbjct: 208 HPLRERPLEAV*QVGQGE 261
>gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13l05 3', mRNA sequence
Length = 622
Score = 67.0 bits (140), Expect(2) = 4e-019
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E + +DFKG FE PFG+GRR CP ++ +E +A L + F W+LP+GM S +
Sbjct: 426 EMSKIDFKGTHFELTPFGAGRRICPALSMSTATVEFTLANLLYRFQWTLPEGMVVSMEEE 247
Query: 1091 GDVFGL 1108
G + L
Sbjct: 246 GKLVPL 229
Score = 48.3 bits (99), Expect(2) = 4e-019
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKD 871
E D +GGY VP +R+ VN WAIGR SW D
Sbjct: 561 EAMRDIQIGGYHVPAKTRIYVNAWAIGRDPTSWPD 457
>gb|BQ662325.1|BQ662325 HS01N10w HS Hordeum vulgare subsp. vulgare cDNA clone HS01N10
3-PRIME, mRNA sequence
Length = 504
Score = 64.8 bits (135), Expect(2) = 4e-019
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2 / -1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
E++ DC VGGY VP G+ ++VN +AI R A+W+D AFRP RF
Sbjct: 489 ESSADCKVGGYDVPSGTMLIVNAYAIHRDPATWEDPTAFRPERF 358
Score = 50.6 bits (104), Expect(2) = 4e-019
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2 / -1
Query: 926 DFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMK 1072
D KG +PFG GRR CPG AL L + + + L F+W DG++
Sbjct: 354 DGKGDGLLLMPFGMGRRRCPGEALALQTVGVVLGMLVQCFDWDRVDGVE 208
Score = 44.1 bits (90), Expect(2) = 2e-008
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = -2 / +2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRNA S H A MA+ T++ PLGT *PPT QS
Sbjct: 362 RSGRNAVGSSHVAGSLWMAYAFTISMVPLGTS*PPTLQS 478
Score = 35.0 bits (70), Expect(2) = 2e-008
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2 / +2
Query: 1065 PSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKG 955
PS Q K C S + + SA PGH RRP P G
Sbjct: 215 PSTRSQSKHCTSIPRTTPTVCSASASPGHLRRPIPNG 325
>gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n10 5', mRNA sequence
Length = 563
Score = 56.5 bits (117), Expect(3) = 5e-019
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2 / +1
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
+F+P G+GRR CP + + VA + H F W LP GM P ++D+
Sbjct: 370 KFIPLGTGRRLCPALPMVELVVPFMVASMLHAFEWRLPQGMSPDQVDV 513
Score = 46.9 bits (96), Expect(3) = 5e-019
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGE 913
+GGY VP G+ ++ N W+I R +W+ D F P RF + E
Sbjct: 220 IGGYDVPMGATIIFNSWSIMRDPEAWERPDEFVPERFLGKTE 345
Score = 35.4 bits (71), Expect(2) = 3e-005
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PP 790
R G N+S H + R M H L M P+GT *PP
Sbjct: 326 RSGTNSSGLSHASGSRMMDHELKMMVAPIGTS*PP 222
Score = 32.7 bits (65), Expect(2) = 3e-005
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -2 / -1
Query: 1095 SPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
S S+ G MP GS K C AT + GH RP P G N
Sbjct: 518 SVTSTWSGDMPWGSLHSKACNMDATMKGTTSSTMGNAGHSLRPVPSGMN 372
Score = 29.0 bits (57), Expect(3) = 5e-019
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 665 DRNVNESDLDKLPFLKCVIKET 730
+R + E+D+ KLP+L+ +KE+
Sbjct: 91 ERMITEADVAKLPYLQAAVKES 156
>gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61P23
5-PRIME, mRNA sequence
Length = 580
Score = 70.7 bits (148), Expect(2) = 5e-019
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LT D+IKA+I+D+ +ET A+A++WAMAE++ +P +R+ Q+E+ + V E
Sbjct: 220 LTNDDIKAVIVDIFIASSETSATALQWAMAELLRNPRVMRKAQEEVRRALDGRDRVTEES 399
Query: 689 LDKLPFLKCVIKE 727
+ L +L VIKE
Sbjct: 400 VASLRYLNLVIKE 438
Score = 44.1 bits (90), Expect(2) = 5e-019
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2 / +1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASW 865
E C V G+ VP G+ V+VN WAIGR A W
Sbjct: 481 ECRAPCRVLGFDVPAGAMVLVNAWAIGRDPAHW 579
>gb|AU252319.1|AU252319 AU252319 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C11R similar to cytochrome P450,
mRNA sequence
Length = 428
Score = 80.3 bits (169), Expect(2) = 7e-019
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 917 AGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPS 1078
+ LD KG +E LPFGSGRR CPG +LGL +++++A L HGF W LPDG++ S
Sbjct: 365 SSLDVKGQNYELLPFGSGRRMCPGYSLGLKVIQVSLANLLHGFTWRLPDGVELS 204
Score = 43.2 bits (88), Expect = 0.003
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -2 / +1
Query: 1089 MSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
+SS PSGS + PC +A + + P PGH RP+P G N
Sbjct: 193 ISSMLSSTPSGSLHVNPCRRFARLTWITFNPRLYPGHILRPDPNGSN 333
Score = 34.1 bits (68), Expect(2) = 7e-019
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2 / -1
Query: 1079 ELDMGDVFGLTAPRATRLYAVPTPRLNCPLY 1171
EL M ++FGL+ PR L AV P+L LY
Sbjct: 212 ELSMEEIFGLSTPRKFPLEAVVEPKLPAHLY 120
Score = 33.6 bits (67), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1 / +3
Query: 1120 ARRGEAEDVAHVQLRGLHAVGQRPVEAVRE 1031
AR G++ED+ H QL + + PV+ VRE
Sbjct: 171 ARCGQSEDLLHAQLHAIRKPPREPVQEVRE 260
>gb|BE196643.3|BE196643 HVSMEh0092N21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092N21f, mRNA sequence
Length = 903
Score = 94.5 bits (200), Expect = 1e-018
Identities = 44/119 (36%), Positives = 63/119 (52%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L D IK++IMD++ G+ET A+ +EWAMAE++ +P + + E+ V E D
Sbjct: 215 LDMDAIKSVIMDILGAGSETAATTLEWAMAELVKNPRAMHKATAEVRRAFHAGGTVAEQD 394
Query: 689 LDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASW 865
L +L +L+ VI ET E C V G V RG++V+VN WA GR W
Sbjct: 395 LTELAYLRLVILETLRADPPIPLVFRECQKSCQVLGDDVARGTQVLVNAWAPGRDERYW 571
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 57.0 bits (118), Expect(3) = 2e-018
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAA 919
+C++ GY++P G+R +N +AI R ++W+ + F P RF G AA
Sbjct: 457 ECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAA 597
Score = 43.2 bits (88), Expect(3) = 2e-018
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
LTRD+IKA ++ + GT+T +E+AM +M +P + LQ E+ +
Sbjct: 181 LTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTI 330
Score = 29.9 bits (59), Expect(3) = 2e-018
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 349 VTQDDLHGLPYLKAVIKET 405
>gb|BE421487.1|BE421487 HWM009.G12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM009.G12, mRNA sequence
Length = 931
Score = 93.6 bits (198), Expect = 2e-018
Identities = 39/86 (45%), Positives = 52/86 (60%)
Frame = +2 / +3
Query: 908 GEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELD 1087
G +DF+G FE LPFG+GRR CPG A GL +EL +A + F+W PD KP+E D
Sbjct: 57 GARVDVDFRGTDFELLPFGAGRRMCPGMAFGLAGVELPLASMLLHFDWEAPDIPKPAEFD 236
Query: 1088 MGDVFGLTAPRATRLYAVPTPRLNCP 1165
M + G+TA R L+ P+ R+ P
Sbjct: 237 MTEELGVTARRKANLHLRPSLRVPLP 314
Score = 62.0 bits (129), Expect = 7e-009
Identities = 35/104 (33%), Positives = 48/104 (46%)
Frame = -2 / -1
Query: 1164 GQLSRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVP 985
G +R G L R AV P +S MS+S GF SG+ Q K + A+ SS+ RP+A+P
Sbjct: 313 GSGTRREGRRWRLAFRRAVTPNSSVMSNSAGFGMSGASQSK*SSMLASGSSTPARPNAIP 134
Query: 984 GHERRPEPKGRNXXXXXXXXXXXXXXSGVKRDGRNASASFHEAR 853
GH RP P G + + + +AS E R
Sbjct: 133 GHILRPAPNGSSSKSVPLKSTSTRAPASKRSGRNSASCRILEPR 2
>gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016D19f, mRNA sequence
Length = 823
Score = 57.9 bits (120), Expect(2) = 3e-018
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +2
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 371 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 550
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 551 SDMPKLKYLRMVLSET 598
Score = 54.2 bits (112), Expect(2) = 3e-018
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
ET +GGY +P + +MVN WAIGR AS KD + F P RF
Sbjct: 638 ETMRPIRLGGYDIPANTMLMVNAWAIGRDPAS*KDPEVFYPERF 769
Score = 34.5 bits (69), Expect = 1.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2 / -2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N S SF EA P+AH T+ G *PP+
Sbjct: 765 RSG*NTSGSFQEAGSLPIAHAFTINMVLAGMS*PPS 658
>gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. vulgare cDNA clone HU13P05
5-PRIME, mRNA sequence
Length = 537
Score = 55.1 bits (114), Expect(3) = 4e-018
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D VGG+ VP G+ MVN+WAI A W + + FRP RF E
Sbjct: 100 DAHVGGHLVPAGTTAMVNMWAIAHDAAVWPEPELFRPERFMEE 228
Score = 49.6 bits (102), Expect(3) = 4e-018
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2 / +1
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSE 1081
G PFG+GRR CPG L L + L +AQL H F W+ + SE
Sbjct: 244 GSDLRLAPFGAGRRVCPGKMLALATVHLWLAQLLHRFEWAPSGSVDLSE 390
Score = 40.9 bits (83), Expect(3) = 6e-011
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -2 / -2
Query: 900 VKRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
+ R GRN+S S H A MAH T+ P GT PPT S
Sbjct: 221 MNRSGRNSSGSGHTAASCAMAHMFTIAVVPAGTRWPPTCAS 99
Score = 34.5 bits (69), Expect(3) = 6e-011
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGE 698
E+R RRV +RLLDDAL+ GE
Sbjct: 75 EERARRVHAQRLLDDALDVGE 13
Score = 29.0 bits (57), Expect(3) = 6e-011
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2 / -2
Query: 1035 ASWATASSSAYRPSAVPGHERRPEPKG 955
+S A+ + R S PGH RRP P G
Sbjct: 344 SSCASQRWTVARASIFPGHTRRPAPNG 264
Score = 24.4 bits (47), Expect(3) = 4e-018
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 698 LPFLKCVIKET 730
LP+++C++KET
Sbjct: 13 LPYIQCIVKET 45
>gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0002G10f, mRNA sequence
Length = 683
Score = 46.0 bits (94), Expect(3) = 7e-018
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +2 / +1
Query: 905 EGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSEL 1084
EG L+ F+ F +GRR C LG + +L HGF WS P M +L
Sbjct: 286 EGAGGNLELTENELRFISFSTGRRGCVAPMLGTAMTVMLFGRLLHGFTWSKPAEMPDIQL 465
Score = 46.0 bits (94), Expect(3) = 7e-018
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSR 895
D VV GY VP+GS V+++ +GR+ A W D F P R
Sbjct: 163 DTVVAGYRVPKGSHVLLSRLGLGRNPAIWNDPLRFNPDR 279
Score = 40.5 bits (82), Expect(2) = 6e-008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 742 VQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQV 620
VQ ERL D L+ EL VRL+H+P+ H +LL +P Q+
Sbjct: 123 VQSERLPDAGLDVVELGDVRLLHLPLPPHHPVQLLRRPPQL 1
Score = 36.8 bits (74), Expect(2) = 6e-008
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R G S SF A +RP L T PLGT *P TT S
Sbjct: 278 RSGLKRSGSFQMAGFRPRPRRLRRTWLPLGTR*PATTVS 162
Score = 36.3 bits (73), Expect(3) = 7e-018
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 623 LRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKE 727
L R +EL VVG +R V ESD+ +L ++K I+E
Sbjct: 4 LGRAAEELDRVVGRERQVQESDIPQLNYVKACIRE 108
>gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_H11 5', mRNA sequence
Length = 489
Score = 74.8 bits (157), Expect(2) = 9e-018
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I ++ G ET +IEW +AE+++ PD +L+QE+A V+G D V E D
Sbjct: 110 INHDNVLYIGENINGGAIETTLWSIEWGVAELVNHPDIQSKLRQEIAAVLGPDAAVTEPD 289
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 290 LERLPYLQAVVKET 331
Score = 35.9 bits (72), Expect(2) = 9e-018
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAF 883
D + GY +P S+++VN W + W AD F
Sbjct: 383 DAKLTGYDIPAESKILVNAWFLANDPKRWVRADEF 487
>gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01F04_T3.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 786
Score = 60.6 bits (126), Expect(2) = 2e-017
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 563 ETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKET 730
ET +IEW +AE+++ P+ ++L++E+ V+G V E DL++LP+L+ V+KET
Sbjct: 24 ETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPDLERLPYLQSVVKET 191
Score = 48.7 bits (100), Expect(2) = 2e-017
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 243 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 371
Score = 41.4 bits (84), Expect = 0.012
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 221 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 93
>gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_H18 5', mRNA sequence
Length = 457
Score = 65.7 bits (137), Expect(2) = 2e-017
Identities = 26/75 (34%), Positives = 48/75 (64%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
R+ D++ I ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E
Sbjct: 32 RIDHDSVLCIGKNINVAPIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEP 211
Query: 686 DLDKLPFLKCVIKET 730
DL++LP+L+ V+KET
Sbjct: 212 DLERLPYLQSVVKET 256
Score = 43.7 bits (89), Expect(2) = 2e-017
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD F+P F E
Sbjct: 308 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFKPECFLEE 436
Score = 41.4 bits (84), Expect = 0.012
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 286 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 158
>gb|AV928880.1|AV928880 AV928880 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd20a20 3', mRNA sequence
Length = 292
Score = 90.0 bits (190), Expect = 3e-017
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +2 / -3
Query: 932 KGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLT 1111
KG F+FLPFG+GRR CPG LG+ +EL +A L F+W LP G+ ++DM +VFGLT
Sbjct: 257 KGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLT 78
Query: 1112 APRATRLYAVPTPRL 1156
R +L VP R+
Sbjct: 77 VRRKEKLLLVPKSRM 33
Score = 49.2 bits (101), Expect = 5e-005
Identities = 28/68 (41%), Positives = 33/68 (48%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
R GT S R V P TS +S S P GS Q K +A SS+ P +PGH
Sbjct: 37 RDFGTNNSFSFRRTVSPNTSVISMSFLPTPRGSSQSKWHTRFANISSTFAIPRFIPGHIL 216
Query: 972 RPEPKGRN 949
RP P G+N
Sbjct: 217 RPAPNGKN 240
>gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day germination, no treatment, cv Optic,
EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ002_E09 5', mRNA sequence
Length = 306
Score = 90.0 bits (190), Expect = 3e-017
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2 / +3
Query: 857 ASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLA 1036
+SW A+ F P RF G AA +D+KG F +LPFG+GRR CPG + A+E+ +A L
Sbjct: 9 SSWDSAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLV 188
Query: 1037 HGFNWSLPDGM 1069
+ F+W LP G+
Sbjct: 189 YHFDWKLPPGI 221
Score = 32.2 bits (64), Expect = 6.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 1068 MPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGR 952
+P GS Q K A+ S A +PGH RP P GR
Sbjct: 220 IPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR 104
>gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H20u 3', mRNA sequence
Length = 393
Score = 64.8 bits (135), Expect(2) = 6e-017
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2 / +1
Query: 524 IKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLP 703
I A+ ++ GTET +S EWAM+ +++ P LR+ Q E+ VG R V D+ +L
Sbjct: 52 ITALCANLFGAGTETTSSTTEWAMSLLLNHPAALRKAQAEIDVAVGTSRLVTADDVPRLA 231
Query: 704 FLKCVIKET 730
+L+C++ ET
Sbjct: 232 YLQCIVSET 258
Score = 43.2 bits (88), Expect(2) = 6e-017
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRAS 862
+++ DC VGGY+VP G+ +MVN +AI R A+
Sbjct: 298 QSSADCKVGGYNVPSGTMLMVNAYAIHRDPAA 393
Score = 39.1 bits (79), Expect(2) = 9e-006
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -1 / -1
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQ 623
Q+ R RRVQP+RL DAL+ GE V H P AH +L L+ Q
Sbjct: 291 QQHRRRRVQPQRLAHDALQVGEPGHVVGGHQPGGAHGHVDLGLRLPQ 151
Score = 30.9 bits (61), Expect(2) = 9e-006
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 849 RPMAHTLTMTREPLGTE*PPTTQS 778
R MA+ T++ PLGT *PPT QS
Sbjct: 380 RWMAYAFTISIVPLGTL*PPTLQS 309
>gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J15 5', mRNA sequence
Length = 490
Score = 51.5 bits (106), Expect(3) = 9e-017
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY++P S+++VN W + + WK D FRP RF E
Sbjct: 85 DAKLAGYNIPAESKILVNAWFLANNPEQWKRPDEFRPERFLEE 213
Score = 51.0 bits (105), Expect(3) = 9e-017
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2 / +1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F +LPFG GRRSCPG L L L + + +L F S P G
Sbjct: 211 EEKHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPG 366
Score = 29.9 bits (59), Expect(3) = 8e-004
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGE 698
+QRD QP+RLLD L+ G+
Sbjct: 63 QQRDGHAQPQRLLDHRLQVGQ 1
Score = 25.8 bits (50), Expect(3) = 8e-004
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 990 VPGHERRPEPKGR 952
+PG RRP PKGR
Sbjct: 290 MPGQLRRPTPKGR 252
Score = 23.5 bits (45), Expect(3) = 8e-004
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 897 KRDGRNASASFH 862
KR GRN+S FH
Sbjct: 203 KRSGRNSSGRFH 168
Score = 22.1 bits (42), Expect(3) = 9e-017
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 698 LPFLKCVIKET 730
LP+L+ VIKET
Sbjct: 1 LPYLQAVIKET 33
>gb|AU252316.1|AU252316 AU252316 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C09 similar to putative cytochrome
P450, mRNA sequence
Length = 1066
Score = 45.1 bits (92), Expect(3) = 1e-016
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
D +G Y+VP+ ++V V G + W + FRP RF GE G+D G
Sbjct: 546 DTDIGDYTVPKDAQVHFLVADYGLDESVWTEPHEFRPERFLDGGEGCGVDVTG 704
Score = 44.1 bits (90), Expect(3) = 1e-016
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
LT I + +VM GT+T A+ EW MAE+++ PD +L E+
Sbjct: 285 LTDAEITTLTAEVMVAGTDTTATLFEWIMAELVNHPDVQAKLYDEV 422
Score = 41.4 bits (84), Expect(3) = 1e-016
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / +3
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
+ +PFG+GRR CPG +L LE V L F W
Sbjct: 717 KMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQW 821
Score = 28.1 bits (55), Expect(2) = 0.34
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 987 PGHERRPEPKG 955
PGH RRP PKG
Sbjct: 757 PGHNRRPAPKG 725
Score = 25.8 bits (50), Expect(2) = 0.34
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRN+ S H P + T T LGT * P + S
Sbjct: 661 RSGRNSCGSVHTDSSSP*SATRKWTWASLGTV*SPMSVS 545
>gb|BU989362.1|BU989362 HF21I13r HF Hordeum vulgare subsp. vulgare cDNA clone HF21I13
5-PRIME, mRNA sequence
Length = 499
Score = 44.1 bits (90), Expect(3) = 1e-016
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQL 1033
EF+PFG+GRR CPGT +EL +A L
Sbjct: 403 EFVPFGAGRRQCPGTLFATTIMELVLANL 489
Score = 42.8 bits (87), Expect(3) = 1e-016
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 530 AIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELAD 652
A + D++ TET +S IEWAMAE++ +P+ + + + E+ +
Sbjct: 7 ADLQDIIGAATETTSSTIEWAMAELVGNPEAMAKAKHEVRE 129
Score = 40.9 bits (83), Expect(3) = 1e-016
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASW 865
DC V GY +P+G+ VM+N +A+G A W
Sbjct: 247 DCQVMGYHIPKGTAVMINGFAVGTDPAHW 333
Score = 31.8 bits (63), Expect = 9.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 1026 ATASSSAYRPSAVPGHERRPEPKGRN 949
A+ SS ++VPGH RRP P G N
Sbjct: 482 ASTSSMIVVANSVPGHCRRPAPNGTN 405
>gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. vulgare cDNA clone HV14C06
5-PRIME, mRNA sequence
Length = 453
Score = 66.1 bits (138), Expect(2) = 1e-016
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
RLT + +KA + + ++A EWA+AEM+ +P+ L R +EL VVG +R V ES
Sbjct: 68 RLTMEEVKAQAKLINLAAVDNPSNAAEWALAEMVKNPELLGRAAEELDRVVGRERXVQES 247
Query: 686 DLDKLPFLKCVIKE 727
D+ +L ++K I+E
Sbjct: 248 DIPQLNYVKACIRE 289
Score = 40.5 bits (82), Expect(2) = 1e-016
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKD 871
D VV GY VP+GS V+++ +GR+ A W D
Sbjct: 344 DTVVAGYRVPKGSHVLLSRLGLGRNPAIWND 436
Score = 35.9 bits (72), Expect(2) = 6e-006
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 742 VQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQPAQ 623
VQ ERL D L+ EL VRL+H+ + H +LL +P Q
Sbjct: 304 VQSERLPDAGLDVVELGDVRLLHLXLPPHHPVQLLRRPPQ 185
Score = 34.5 bits (69), Expect(2) = 6e-006
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -2 / -1
Query: 888 GRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
G S SF A +RP L T PLGT *P TT S
Sbjct: 453 GLKRSGSFQMAGFRPRPRRLRRTWLPLGTR*PATTVS 343
>gb|AV915951.1|AV915951 AV915951 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16m22 5', mRNA sequence
Length = 395
Score = 87.2 bits (184), Expect = 2e-016
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / +3
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 30 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESP 209
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 210 GLVTFMGTPLQAIATPRL 263
Score = 56.5 bits (117), Expect = 3e-007
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = -2 / -2
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G +PSG D LK C+ ++ PS PGH
Sbjct: 259 RGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 80
Query: 972 RPEPKG 955
RP PKG
Sbjct: 79 RPAPKG 62
>gb|AJ434819.1|AJ434819 AJ434819 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200058H04F1, mRNA sequence
Length = 422
Score = 65.7 bits (137), Expect(2) = 2e-016
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +2 / +2
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTA 1114
G FE +PFG GRR CPG L + L + L H F W LP +K + +DM + G+
Sbjct: 110 GQDFEMIPFGLGRRICPGMPLAQKLIPLILGTLLHRFEWELPADVKETGIDMTEKCGVVL 289
Query: 1115 PRATRLYAVP 1144
T L A+P
Sbjct: 290 SLVTPLTAIP 319
Score = 40.5 bits (82), Expect(2) = 2e-016
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +2
Query: 830 NVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGG 940
+ WAI R+ +W D D F P RF GE A +++ G
Sbjct: 2 SAWAINRNADAWSDPDKFVPERFIGAGETAARNYQLG 112
Score = 29.9 bits (59), Expect(2) = 0.87
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = -2 / -3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
+G A V + P S MS +GS +S ++ S +PG RRP
Sbjct: 321 LGMAVRGVTKDNTTPHFSVMSIPVSLTSAGSSHSNRWSSVPRIRGISF*ASGIPGQMRRP 142
Query: 966 EPKG 955
P G
Sbjct: 141 RPNG 130
Score = 22.6 bits (43), Expect(2) = 0.87
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1 / -2
Query: 916 GLALGREARRPERVGVLPRGAVAADGP 836
GLA E R E VG+ P V D P
Sbjct: 88 GLAGADEPLRDELVGIRPCVGVPVDRP 8
>gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. vulgare cDNA clone HV09C09
5-PRIME, mRNA sequence
Length = 653
Score = 45.1 bits (92), Expect(3) = 2e-016
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
D +G Y+VP+ ++V V G + W + FRP RF GE G+D G
Sbjct: 251 DTDIGDYTVPKDAQVHFLVADYGLDESVWTEPHEFRPERFLDGGEGCGVDVTG 409
Score = 41.4 bits (84), Expect(3) = 2e-016
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / +2
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
+ +PFG+GRR CPG +L LE V L F W
Sbjct: 422 KMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQW 526
Score = 41.4 bits (84), Expect(3) = 2e-016
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 527 KAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
+ + +VM GT+T A+ EW MAE+++ PD +L E+
Sbjct: 8 RTLTAEVMVAGTDTTATLFEWIMAELVNHPDVQAKLYDEV 127
Score = 28.1 bits (55), Expect(2) = 0.35
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 987 PGHERRPEPKG 955
PGH RRP PKG
Sbjct: 462 PGHNRRPAPKG 430
Score = 25.8 bits (50), Expect(2) = 0.35
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRN+ S H P + T T LGT * P + S
Sbjct: 366 RSGRNSCGSVHTDSSSP*SATRKWTWASLGTV*SPMSVS 250
>gb|BJ467028.1|BJ467028 BJ467028 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35k11 3', mRNA sequence
Length = 446
Score = 86.8 bits (183), Expect = 3e-016
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E +DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ +
Sbjct: 406 EELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGV 227
Query: 1091 GDVFGLTAPRATRLYAVPT 1147
+ GLT + L VPT
Sbjct: 226 EEFGGLTFRKKKPLVLVPT 170
Score = 48.3 bits (99), Expect = 1e-004
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 171 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 350
Query: 966 EPKGRN 949
PKGR+
Sbjct: 351 APKGRS 368
>gb|BI958347.1|BI958347 HVSMEn0014I13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014I13f,
mRNA sequence
Length = 757
Score = 86.3 bits (182), Expect = 4e-016
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2 / -1
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+D KG F LPFG+GRR CPG LG+ + + + H F WSLP+G +P ++ M +
Sbjct: 697 IDIKGSDFGVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESP 518
Query: 1103 GLTAPRATRLYAVPTPRL 1156
GL T L A+ TPRL
Sbjct: 517 GLVTFMGTPLQAIATPRL 464
Score = 56.5 bits (117), Expect = 3e-007
Identities = 28/66 (42%), Positives = 32/66 (48%)
Frame = -2 / +3
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHER 973
RGV A S V P S M S G +PSG D LK C+ ++ PS PGH
Sbjct: 468 RGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPIMEATRLIPSCAPGHTL 647
Query: 972 RPEPKG 955
RP PKG
Sbjct: 648 RPAPKG 665
>gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags3g14 3', mRNA sequence
Length = 462
Score = 86.3 bits (182), Expect = 4e-016
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +2 / -1
Query: 893 RFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMK 1072
RF G AA +D+KG F +LPFG+GR CPG + A+E+ +A L + F+W LP G
Sbjct: 456 RFMQGGSAAAMDYKGNGFLYLPFGTGRXICPGINFAIAAIEIMLANLVYHFDWKLPPGSA 277
Query: 1073 PSELDMGDVFGLTAPRATRLYAVP 1144
+ + FGLT R +L VP
Sbjct: 276 ERGISXTESFGLTVHRKDKLLLVP 205
Score = 39.6 bits (80), Expect = 0.041
Identities = 24/64 (37%), Positives = 27/64 (42%)
Frame = -2 / +2
Query: 1143 GTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPE 964
GT SL R V P S + P GS Q K A+ S A +PGH RP
Sbjct: 206 GTRRSLSLRCTVSPNDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHXLRPV 385
Query: 963 PKGR 952
P GR
Sbjct: 386 PNGR 397
>gb|CA015964.1|CA015964 HV11L11u HV Hordeum vulgare subsp. vulgare cDNA clone HV11L11
3-PRIME, mRNA sequence
Length = 430
Score = 85.8 bits (181), Expect = 5e-016
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVF 1102
+DF GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ + +
Sbjct: 426 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFG 247
Query: 1103 GLTAPRATRLYAVPT 1147
GLT + L VPT
Sbjct: 246 GLTFRKKKPLVLVPT 202
Score = 48.3 bits (99), Expect = 1e-004
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / +2
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 203 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 382
Query: 966 EPKGRN 949
PKGR+
Sbjct: 383 APKGRS 400
>gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021J18f, mRNA sequence
Length = 834
Score = 66.1 bits (138), Expect(2) = 5e-016
Identities = 25/74 (33%), Positives = 47/74 (63%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G E D
Sbjct: 211 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPETEPD 390
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 391 LERLPYLQSVVKET 432
Score = 38.6 bits (78), Expect(2) = 5e-016
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAA 919
D + GY++P S+++ N W + A+ FRP RF E + A
Sbjct: 484 DAKLAGYNIPAESKILGNAWFLANDPKRGGRANKFRPQRFLKEEKPA 624
Score = 36.3 bits (73), Expect = 0.38
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL +A +LL Q
Sbjct: 462 QERDGHAEAERLLHDGLQVGEALQVRLRLRRARAQHGDDLLAQ 334
>gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n10 3', mRNA sequence
Length = 646
Score = 56.5 bits (117), Expect(2) = 1e-015
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2 / -3
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
+F+P G+GRR CP + + VA + H F W LP GM P ++D+
Sbjct: 428 KFIPLGTGRRLCPALPMVELVVPFMVASMLHAFEWRLPQGMSPDQVDV 285
Score = 46.9 bits (96), Expect(2) = 1e-015
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2 / -3
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGE 913
+GGY VP G+ ++ N W+I R +W+ D F P RF + E
Sbjct: 578 IGGYDVPMGATIIFNSWSIMRDPEAWERPDEFVPERFLGKTE 453
Score = 35.4 bits (71), Expect(2) = 3e-005
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2 / +1
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PP 790
R G N+S H + R M H L M P+GT *PP
Sbjct: 472 RSGTNSSGLSHASGSRMMDHELKMMVAPIGTS*PP 576
Score = 32.7 bits (65), Expect(2) = 3e-005
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -2 / +1
Query: 1095 SPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
S S+ G MP GS K C AT + GH RP P G N
Sbjct: 280 SVTSTWSGDMPWGSLHSKACNMDATMKGTTSSTMGNAGHSLRPVPSGMN 426
>gb|BF257896.3|BF257896 HVSMEf0014C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014C17f, mRNA sequence
Length = 568
Score = 53.8 bits (111), Expect(2) = 1e-015
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D ++A++ D G T A+ IEW M +++H+P + ++++EL VG + ESD
Sbjct: 85 LSHDVMRALLSDWYGAGASTTAALIEWGMEDLLHNP*VMLKVKEELTTDVGEKPLMEESD 264
Query: 689 LDKLPFLK 712
+ ++ +L+
Sbjct: 265 IGRIAYLQ 288
Score = 49.6 bits (102), Expect(2) = 1e-015
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAF 883
D V GY +P+G+ V++N W I R+ SW DAD F
Sbjct: 355 DIDVNGYRIPKGAGVILNAWTINRYADSWSDADKF 459
Score = 31.8 bits (63), Expect = 9.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2 / -3
Query: 885 RNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
+N SAS HE+ +R + L +T P G *P T+ S
Sbjct: 461 KNLSASDHESAYRLIVQALRITPAPFGIL*PFTSMS 354
>gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. vulgare cDNA clone HA04M20
5-PRIME, mRNA sequence
Length = 630
Score = 51.5 bits (106), Expect(2) = 2e-015
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
+GGY++P GS+V+VN W + + W+ + FRP RF E
Sbjct: 53 LGGYTIPEGSKVVVNAWWLANNPELWEKPEEFRPERFLGE 172
Score = 51.0 bits (105), Expect(2) = 2e-015
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +2 / +2
Query: 944 FEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGM 1069
F FLPFG GRRSCPG L L L L V +L F P G+
Sbjct: 212 FRFLPFGVGRRSCPGIILALPILALIVGKLVRSFEMVPPPGV 337
Score = 31.8 bits (63), Expect = 9.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -1
Query: 1065 PSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P G K S+ T S+ +PG RRP P GRN
Sbjct: 333 PGGGTISKLLTSFPTMSARMGSARMMPGQLRRPTPNGRN 217
>gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46P09
5-PRIME, mRNA sequence
Length = 501
Score = 51.5 bits (106), Expect(2) = 2e-015
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY++P S+++VN W + + WK D FRP RF E
Sbjct: 11 DAKLAGYNIPAESKILVNAWFLANNPEQWKRPDEFRPERFLEE 139
Score = 51.0 bits (105), Expect(2) = 2e-015
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F +LPFG GRRSCPG L L L + + +L F S P G
Sbjct: 137 EEKHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFVLSPPPG 292
Score = 25.8 bits (50), Expect(2) = 6.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 990 VPGHERRPEPKGR 952
+PG RRP PKGR
Sbjct: 216 MPGQLRRPTPKGR 178
Score = 23.5 bits (45), Expect(2) = 6.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 897 KRDGRNASASFH 862
KR GRN+S FH
Sbjct: 129 KRSGRNSSGRFH 94
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 54.2 bits (112), Expect(2) = 2e-014
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWK 868
DC++ GY VP G+RV+VN WAIGR +SW+
Sbjct: 447 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWE 536
Score = 45.5 bits (93), Expect(2) = 2e-014
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2 / +1
Query: 854 RASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGS 967
RA + F P RFT EG ++FKG F+FLPFG+
Sbjct: 523 RAPGSTREEFIPERFTDEGSTMHINFKGNDFQFLPFGA 636
>gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. vulgare cDNA clone HT06E05
3-PRIME, mRNA sequence
Length = 549
Score = 69.8 bits (146), Expect(2) = 2e-014
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2 / -3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLP 1060
EAA DF GG F+PFG+GRR CPG A GL +EL +A L F+W LP
Sbjct: 475 EAAKADFGGGDLAFVPFGAGRRMCPGMAFGLAGVELPLASLLFHFDWELP 326
Score = 43.2 bits (88), Expect = 0.003
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -2 / +3
Query: 1059 GSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
GS Q K + A+ SS+ RP+A+PGH RP PKG N
Sbjct: 327 GSSQSKWKSRLASGSSTPARPNAMPGHILRPAPKGTN 437
Score = 29.9 bits (59), Expect(2) = 2e-014
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2 / -3
Query: 1064 GMKPSELDMGDVFGLTAPRATRLYAVPTPRLNCP 1165
G ++LDM + FGLTA R +L P R+ P
Sbjct: 325 GPGSAKLDMTETFGLTARRTDQLLLRPVLRVPIP 224
>gb|BG299631.1|BG299631 HVSMEa0021C22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021C22f, mRNA sequence
Length = 817
Score = 58.3 bits (121), Expect(2) = 2e-014
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2 / +2
Query: 524 IKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLP 703
I A+ ++ GTET ++ EWAM+ +++ P LR+ Q E+ VG R V D+ +L
Sbjct: 398 ITALCANLFGAGTETTSTTTEWAMSLLLNHPAALRKAQAEIDAAVGTSRVVTADDVPRLV 577
Query: 704 FLKCVIKET 730
+L+C+ +T
Sbjct: 578 YLQCIGSKT 604
Score = 44.6 bits (91), Expect(2) = 2e-014
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +2 / +2
Query: 149 TKNVTFRAAFGTRDGEDQEEFIAILQEFSKLFGAFNVVDFLPWLSWMDLQGINXXXXXXX 328
TK A T + +EF ++ E GA N D+LP + W D+ G+
Sbjct: 71 TKGTRSEADADTDMSVEAQEFKKVVDEIIPYLGAANTWDYLPVMRWFDVFGVRNKILAAV 250
Query: 329 XXXXXFIDKIIDEHVRR 379
F+ ++ID RR
Sbjct: 251 SRRDAFLHRLIDAERRR 301
>gb|AU252310.1|AU252310 AU252310 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C03 similar to cytochrome P450
CYP99A1, mRNA sequence
Length = 691
Score = 55.1 bits (114), Expect(2) = 3e-014
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2 / +2
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
C V G+ V G+RV+VN WA+GR W++A+ F P RF
Sbjct: 518 CXVXGFEVKEGTRVLVNTWAMGRSSEYWENAEEFMPERF 634
Score = 46.9 bits (96), Expect(2) = 3e-014
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 521 NIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
+IKAII+D+ GT++ ++A EW M+E+M +P + Q E+
Sbjct: 251 DIKAIILDMFTAGTDSTSAAAEWVMSELMRNPKVMAEAQAEV 376
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 53.8 bits (111), Expect(2) = 3e-014
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2 / +3
Query: 782 CVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
C V GY VP+G+ V VN WAI R W A+ FRP RF
Sbjct: 303 CKVLGYDVPKGATVFVNAWAICRDPKHWDAAEEFRPERF 419
Score = 45.1 bits (92), Expect(2) = 3e-014
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPG 988
E+ +DFKG FE+ PFG+GRR CPG
Sbjct: 420 ESGEVDFKGTNFEYTPFGAGRRICPG 497
Score = 39.6 bits (80), Expect(2) = 4e-005
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = -1 / -2
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVH 674
Q+QR RRVQPERLLDD E+ QV L H
Sbjct: 281 QQQRHRRVQPERLLDDQPHVLEVGQVVLGH 192
Score = 28.1 bits (55), Expect(2) = 4e-005
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2 / -3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPT 787
R G N+SA+ +AH T T PLGT P T
Sbjct: 415 RSGLNSSAASQCLGSLQIAHAFTNTVAPLGTSYPRT 308
>gb|AL505691.1|AL505691 AL505691 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09D20V 5', mRNA sequence
Length = 500
Score = 79.9 bits (168), Expect = 3e-014
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +2 / -3
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRAT 1126
EF+PFG+GRR+CPG + + L +A + H F W LP+GM P ++D+ FG + T
Sbjct: 414 EFMPFGAGRRACPGMPMATRVVTLILASVLHAFEWRLPNGMLPCDVDVRGRFGTSLKMVT 235
Query: 1127 RLYAVPTP 1150
L AVP P
Sbjct: 234 PLRAVPVP 211
Score = 37.3 bits (75), Expect(2) = 0.011
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = -2 / +2
Query: 1155 SRGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHE 976
+ G GTA S V + P S+S G +P GS K ++ A S + +PGH
Sbjct: 206 NNGTGTALSGVTILSDVPNRPLTSTSHGSIPLGSLHSKA*STEARISVTTLVAMGIPGHA 385
Query: 975 RRPEPKGRN 949
P P G N
Sbjct: 386 LLPAPNGMN 412
Score = 24.4 bits (47), Expect(2) = 0.011
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3 / +3
Query: 1358 FFFFFLRIK 1332
FFFFFLR+K
Sbjct: 30 FFFFFLRVK 56
>gb|BF630974.2|BF630974 HVSMEb0014J14f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0014J14f, mRNA sequence
Length = 794
Score = 79.9 bits (168), Expect = 3e-014
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2 / +2
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTA 1114
GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ + + GLT
Sbjct: 5 GGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTF 184
Query: 1115 PRATRLYAVPT 1147
+ L VPT
Sbjct: 185 RKKKPLVLVPT 217
Score = 48.3 bits (99), Expect = 1e-004
Identities = 28/66 (42%), Positives = 34/66 (51%)
Frame = -2 / -3
Query: 1146 VGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRP 967
VGT+ S VRP S +S +P GS QLK + A +S P A PG RRP
Sbjct: 216 VGTSTSGFFFRKVRPPNSSTPTSSLLIP*GSAQLKQ*SKLARMNSVLATPMASPGQIRRP 37
Query: 966 EPKGRN 949
PKGR+
Sbjct: 36 APKGRS 19
>gb|CA016358.1|CA016358 HV09D15u HV Hordeum vulgare subsp. vulgare cDNA clone HV09D15
3-PRIME, mRNA sequence
Length = 417
Score = 79.9 bits (168), Expect = 3e-014
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2 / -2
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTA 1114
GG +E LPFG+GRR CPG A+G+ E +A L + FNW+LP GM+ ++ + + GLT
Sbjct: 413 GGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFGGLTF 234
Query: 1115 PRATRLYAVPT 1147
+ L VPT
Sbjct: 233 RKKKPLVLVPT 201
Score = 47.8 bits (98), Expect = 1e-004
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / +1
Query: 1110 VRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
VRP S +S +P GS QLK + A +S P A PG RRP PKGR+
Sbjct: 238 VRPPNSSTPTSSLLIP*GSAQLKQXSKLARMNSVLATPMASPGQIRRPAPKGRS 399
>gb|AL504503.1|AL504503 AL504503 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05H19V 5', mRNA sequence
Length = 700
Score = 53.8 bits (111), Expect(2) = 5e-014
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
E DC VGG+ V RG+ ++VN WAI R W + F P RF
Sbjct: 20 EAMEDCTVGGFRVQRGTMILVNAWAIHRDANVWDAPEEFMPERF 151
Score = 44.1 bits (90), Expect(2) = 5e-014
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2 / +2
Query: 953 LPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
LPFG GRR CPG L + + L +A L F W + G
Sbjct: 182 LPFGLGRRRCPGEGLAMRLVGLTLATLVQCFEWDVGQG 295
Score = 29.9 bits (59), Expect(2) = 0.14
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2 / -2
Query: 900 VKRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
+ R G N+S + R +AH T P T PPT QS
Sbjct: 153 MNRSGMNSSGASQTLASRWIAHAFTRIIVPRWTRKPPTVQS 31
Score = 25.4 bits (49), Expect(2) = 0.14
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -2 / -2
Query: 1044 KPCASWATASSSAYRPSAVPGHERRPEPKG 955
K C S A + PGH RP P G
Sbjct: 273 KHCTSVARVKPTRRIARPSPGHRLRPSPNG 184
>gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
5-PRIME, mRNA sequence
Length = 650
Score = 68.9 bits (144), Expect(2) = 5e-014
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 305 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 484
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 485 LERLPYLQSVVKET 526
Score = 41.4 bits (84), Expect = 0.012
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 556 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 428
Score = 29.0 bits (57), Expect(2) = 5e-014
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVW 838
D + GY +P S+++VN W
Sbjct: 578 DAKLAGYDIPAESKILVNAW 637
>gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 5', mRNA sequence
Length = 561
Score = 68.9 bits (144), Expect(2) = 5e-014
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 227 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 406
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 407 LERLPYLQSVVKET 448
Score = 41.4 bits (84), Expect = 0.012
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 478 QERDGHAEAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 350
Score = 29.0 bits (57), Expect(2) = 5e-014
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVW 838
D + GY +P S+++VN W
Sbjct: 500 DAKLAGYDIPAESKILVNAW 559
>gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53H05
5-PRIME, mRNA sequence
Length = 579
Score = 67.5 bits (141), Expect(2) = 7e-014
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ II ++ ET +IEW +AE+++ P+ ++L+ E+ V+G+ + E D
Sbjct: 224 INEDNVLYIIENINVAAIETTLWSIEWGLAELVNHPEIQQKLRDEMDAVLGVGHQITEPD 403
Query: 689 LDKLPFLKCVIKET 730
+LP+L+ VIKET
Sbjct: 404 THRLPYLQAVIKET 445
Score = 36.8 bits (74), Expect = 0.28
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
+QRD QP+RLLD L+ G+ V+VRL
Sbjct: 475 QQRDGHAQPQRLLDHRLQVGQPVRVRL 395
Score = 29.9 bits (59), Expect(2) = 7e-014
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRH 853
D + GY++P S+++VN W + +
Sbjct: 497 DAKLAGYNIPAESKILVNAWFLANN 571
>gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 5', mRNA sequence
Length = 544
Score = 78.5 bits (165), Expect = 8e-014
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCF 946
DC++ GY VP G+RV+VN WAIGR +SW+ + F P RFT EG ++FKG F
Sbjct: 376 DCIIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDF 543
>gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017M13f, mRNA sequence
Length = 723
Score = 64.8 bits (135), Expect(2) = 1e-013
Identities = 25/74 (33%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+T + ++I + + GTET ASA++W MA ++ PD ++L+ E+ + G + V E++
Sbjct: 266 VTDGELVSLISEFLGAGTETTASALQWTMANLVKRPDLQQKLRVEVDAIAGNGQVVEETE 445
Query: 689 LDKLPFLKCVIKET 730
L ++P+LK V+ E+
Sbjct: 446 LSRMPYLKAVVLES 487
Score = 32.2 bits (64), Expect(2) = 1e-013
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2 / +2
Query: 812 GSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGE 913
G+ V V IGR A+W + F P RF P G+
Sbjct: 581 GATVNFLVGKIGRDAAAWPNPMEFTPERFMPGGD 682
>gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200035H01F1, mRNA sequence
Length = 621
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 33 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 161
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 159 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 314
>gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n15 3', mRNA sequence
Length = 615
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 579 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 451
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 453 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 298
>gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 3', mRNA sequence
Length = 598
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 562 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 434
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 436 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 281
>gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27m08 3', mRNA sequence
Length = 577
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 550 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 422
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 424 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 269
>gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 3', mRNA sequence
Length = 568
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 539 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 411
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / -3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 413 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 258
>gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52M20
5-PRIME, mRNA sequence
Length = 465
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 86 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 214
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 212 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 367
Score = 29.5 bits (58), Expect(2) = 0.39
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -2 / -1
Query: 1065 PSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P G K C + +PG RRP PKG N
Sbjct: 366 PGGGSSSKFCTRRPSVMPMMGSARMIPGQLRRPTPKGTN 250
Score = 26.7 bits (52), Expect(2) = 0.39
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGE 698
++RD + ERLL D L+ GE
Sbjct: 64 QERDGHAEAERLLHDGLQVGE 2
>gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_K12 5', mRNA sequence
Length = 380
Score = 48.7 bits (100), Expect(2) = 1e-013
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
D + GY +P S+++VN W + W AD FRP RF E
Sbjct: 77 DAKLAGYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 205
Score = 48.3 bits (99), Expect(2) = 1e-013
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / +2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 203 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 358
>gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11k05 5', mRNA sequence
Length = 567
Score = 57.9 bits (120), Expect(2) = 2e-013
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2 / +2
Query: 503 LRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNE 682
+ TRD+ K+I+ D T+T + + W M E++ P L + Q E+ G V
Sbjct: 212 ITFTRDHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRI 391
Query: 683 SDLDKLPFLKCVIKET 730
SD+ KL +L+ V+ ET
Sbjct: 392 SDMPKLKYLRMVLSET 439
Score = 38.2 bits (77), Expect(2) = 2e-013
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGR 850
ET +GGY +P + +MVN WAIGR
Sbjct: 479 ETMRPIRLGGYDIPANTMLMVNAWAIGR 562
>gb|BE411284.1|BE411284 ISC004.A02F990510 ITEC ISC Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone ISC004.A02, mRNA sequence
Length = 488
Score = 68.4 bits (143), Expect(2) = 3e-013
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +2 / -3
Query: 908 GEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELD 1087
G + +D+ G FLPFG+GRR CPG A +LA+A + + F+W LP G P +
Sbjct: 360 GGSGTMDYNGKDPRFLPFGAGRRGCPGIAFATRLAQLALANMMYHFDWELPGGQDPESFE 181
Query: 1088 MGDVFGLTAPRATRLYAVPTP 1150
+ + G++ + L P
Sbjct: 180 LVEASGVSPGLKSALILAAKP 118
Score = 45.5 bits (93), Expect(2) = 3e-006
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -2 / +2
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P S S+ G P GS Q K A+AS + A+PGH P PKGRN
Sbjct: 164 PLASTSSNDSGSWPPGSSQSKWYIMLASASCARRVAKAIPGHPLLPAPKGRN 319
Score = 27.2 bits (53), Expect(2) = 3e-013
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 848 RHRASWKDADAFRPSRF 898
R SW++A+ FRP RF
Sbjct: 414 RDXESWENAEEFRPERF 364
Score = 25.8 bits (50), Expect(2) = 3e-006
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / +1
Query: 916 GLALGREARRPERVGVLPR 860
G A +E RPE +GVLPR
Sbjct: 346 GSASAQEPFRPELLGVLPR 402
>gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0008H17f, mRNA sequence
Length = 872
Score = 45.5 bits (93), Expect(3) = 7e-013
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
D +G Y+VP+ ++V V G ++ W + FRP RF G+ G+D G
Sbjct: 285 DTDIGDYTVPKDAQVHFLVADYGLDQSVWTEPHEFRPERFLDRGQGCGVDLTG 443
Score = 41.8 bits (85), Expect(3) = 7e-013
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPD 619
LT I + +VM GT+T A+ EW MAE+++ PD
Sbjct: 24 LTDAEITTLTAEVMVAGTDTTATLFEWIMAELVNHPD 134
Score = 29.5 bits (58), Expect(3) = 7e-013
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 953 LPFGSGRRSCPG 988
+PFG+GRR CPG
Sbjct: 461 MPFGAGRRLCPG 496
Score = 29.5 bits (58), Expect(2) = 0.25
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 990 VPGHERRPEPKG 955
+PGH RRP PKG
Sbjct: 498 IPGHNRRPAPKG 463
Score = 24.9 bits (48), Expect(2) = 0.25
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRN+ S H P + T T LGT * P + S
Sbjct: 400 RSGRNSCGSVHTDWSSP*SATRKWTWASLGTV*SPMSVS 284
>gb|BF630963.2|BF630963 HVSMEb0014J02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014J02f, mRNA sequence
Length = 746
Score = 74.8 bits (157), Expect = 1e-012
Identities = 30/103 (29%), Positives = 58/103 (56%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
L+ D ++A++ D+ G T A+ IEW M +++ +P+ +R++++EL V+G + E D
Sbjct: 407 LSHDVMRALLSDLYGAGASTTAALIEWGMVDLLQNPEVMRKVKEELTTVLGEKPLMEEXD 586
Query: 689 LDKLPFLKCVIKETXXXXXXXXXXXXETAGDCVVGGYSVPRGS 817
+ +LP+L+ V KE + D V G+ +P+ +
Sbjct: 587 IGRLPYLQAVAKEILRLRMVVPLVPXKAEADIEVNGFRIPKAT 715
>gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004F12f, mRNA sequence
Length = 799
Score = 47.3 bits (97), Expect(2) = 1e-012
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2 / +3
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTP 904
+ + D V GY +P+G+ V NVWAI R+ +W RP R P
Sbjct: 180 KASADVKVAGYYIPKGASVTENVWAIARNPYAWDTPLEIRPERLLP 317
Score = 46.0 bits (94), Expect(2) = 1e-012
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = +2 / +3
Query: 599 EMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKET 730
+++ +P ++Q+EL VVG DR ++E+DL LP+L+ V+KE+
Sbjct: 9 DVVRNPRVQHKVQEELDRVVGRDRVLSETDLPSLPYLQAVVKES 140
Score = 40.9 bits (83), Expect(2) = 5e-007
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = -1 / -3
Query: 763 QEQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLL 635
+ QR RRVQPERLL D L+ + VRL PV A +LLL
Sbjct: 173 EHQRRRRVQPERLLHDGLQVRQAR*VRLRQHPVAADHPVQLLL 45
Score = 33.1 bits (66), Expect(2) = 5e-007
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2 / -1
Query: 903 GVKRDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
G KR G +S H R +AHT ++T PLG *P T S
Sbjct: 316 GSKRSGLISSGVSHA*GLRAIAHTFSVTLAPLGM**PATFTS 191
>gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011O14f, mRNA sequence
Length = 813
Score = 63.4 bits (132), Expect(2) = 2e-012
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +2 / +1
Query: 554 GGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESDLDKLPFLKCVIKET 730
GGTET ++ IEWAM+ +++ P L++ Q E+ +G R V D+ +L +L+C+I ET
Sbjct: 160 GGTETTSTTIEWAMSLLLNHPAALKKAQAEIDASIGTSRMVAADDVPRLSYLQCIINET 336
Score = 31.3 bits (62), Expect(3) = 1e-004
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 763 QEQRDRRVQPERLLDDALEEGE 698
Q+QR RRV RL+DDALE E
Sbjct: 369 QQQRRRRVHA*RLVDDALEVAE 304
Score = 29.0 bits (57), Expect(2) = 2e-012
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 767 ETAGDCVVGGYSVPRGS 817
E++ DC VGGY +P G+
Sbjct: 376 ESSADCKVGGYDLPSGT 426
Score = 28.1 bits (55), Expect(3) = 1e-004
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / -3
Query: 886 PERVGVLPRGAVAADGPHV 830
PER GVLPR V DG V
Sbjct: 496 PERSGVLPRPRVPVDGVRV 440
Score = 23.1 bits (44), Expect(3) = 1e-004
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 813 PLGTE*PPTTQS 778
PLG *PPT QS
Sbjct: 422 PLGKS*PPTLQS 387
>gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 5', mRNA sequence
Length = 615
Score = 43.2 bits (88), Expect(3) = 4e-012
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
LTRD+IKA ++ + GT+T +E+AM +M +P + LQ E+ +
Sbjct: 274 LTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTI 423
Score = 35.4 bits (71), Expect(3) = 4e-012
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRGSRVMVNVWAI 844
+C++ GY++P G+R +N +AI
Sbjct: 550 ECIINGYTIPSGTRTFINTYAI 615
Score = 29.9 bits (59), Expect(3) = 4e-012
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 442 VTQDDLHGLPYLKAVIKET 498
>gb|CB881714.1|CB881714 HM10K16w HM Hordeum vulgare subsp. vulgare cDNA clone HM10K16
3-PRIME, mRNA sequence
Length = 542
Score = 72.5 bits (152), Expect = 5e-012
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2 / -2
Query: 935 GGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTA 1114
G +EFLPFG+GRR CPG GL ++ELA+ L + F+WSLP+G+ +++ G+
Sbjct: 538 GSSYEFLPFGAGRRMCPGFNYGLASMELALVGLLYHFDWSLPEGVADVDMEEAPGLGVRR 359
Query: 1115 PRATRLYAVP 1144
L A P
Sbjct: 358 RTPLMLLATP 329
Score = 43.2 bits (88), Expect = 0.003
Identities = 23/52 (44%), Positives = 25/52 (48%)
Frame = -2 / +3
Query: 1104 PKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKGRN 949
P+ S S PSGSDQ K + ASS P PGH RP P GRN
Sbjct: 369 PRPGASSISTSATPSGSDQSKW*SRPTRASSMLASP*LKPGHILRPAPNGRN 524
>gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. vulgare cDNA clone HU10K20
3-PRIME, mRNA sequence
Length = 520
Score = 44.1 bits (90), Expect(3) = 7e-012
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2 / +1
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
+ A D VGGY +P+G+ V V + R W+ F P R P G +D G
Sbjct: 280 KAAEDMEVGGYLIPKGATVNFMVAEMSRDEREWEKPTEFVPERILPGGAGEAVDVTG 450
Score = 37.3 bits (75), Expect(3) = 7e-012
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDR 670
LT + + + + + GT+T ++ ++W MAE++ +P +L +E++ G D+
Sbjct: 16 LTDNEMINLCSEFLDAGTDTTSTGLQWIMAELVKNPAIQEKLYKEISATKGDDK 177
Score = 26.3 bits (51), Expect(3) = 7e-012
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2 / +1
Query: 947 EFLPFGSGRRSCPGTALGL 1003
+ +PFG GRR C G + +
Sbjct: 463 KMMPFGVGRRICAGLGIAM 519
>gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200025H07F1, mRNA sequence
Length = 240
Score = 46.4 bits (95), Expect(2) = 1e-011
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2 / +3
Query: 794 GYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
GY +P S+++VN W + W AD FRP RF E
Sbjct: 3 GYDIPAESKILVNAWFLANDPKRWVRADEFRPERFLEE 116
Score = 43.2 bits (88), Expect(2) = 1e-011
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQL 1033
E ++ G F F+PFG GRRSCPG L L + + + +L
Sbjct: 114 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRL 236
>gb|BQ662532.1|BQ662532 HS02N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS02N10
3-PRIME, mRNA sequence
Length = 448
Score = 50.6 bits (104), Expect(3) = 2e-011
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2 / -3
Query: 926 DFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMK 1072
D KG +PFG GRR CPG AL L + + + L F+W DG++
Sbjct: 398 DGKGDGLLLIPFGMGRRRCPGEALALQTVGVVLGMLVQCFDWDRVDGVE 252
Score = 35.0 bits (70), Expect = 0.99
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2 / +1
Query: 1065 PSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKG 955
PS Q K C S + + SA PGH RRP P G
Sbjct: 259 PSTRSQSKHCTSIPRTTPTVCSASASPGHLRRPIPNG 369
Score = 28.1 bits (55), Expect(3) = 2e-011
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 1079 ELDMGDVFGLTAPRATRLYAVPTPR 1153
E+DM + G+T P+A L AV PR
Sbjct: 254 EVDMTEGVGITMPKAVALEAVCRPR 180
Score = 27.6 bits (54), Expect(3) = 2e-011
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 857 ASWKDADAFRPSRF 898
A+W+D AFRP RF
Sbjct: 443 ATWEDPTAFRPERF 402
>gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d07 5', mRNA sequence
Length = 578
Score = 47.8 bits (98), Expect(2) = 2e-011
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2 / +2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDA 874
DCV+ GY++P G+RV+VN AI R +SW+ A
Sbjct: 482 DCVINGYTIPSGTRVIVNSRAIARDPSSWESA 577
Score = 44.1 bits (90), Expect(2) = 2e-011
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
LTR+ +KA ++ + GT+T +E+AMA +M +PD + +LQ E+
Sbjct: 206 LTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 343
Score = 31.3 bits (62), Expect(2) = 0.057
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRL 680
++R R V+PE LLDD L G++V++ L
Sbjct: 460 QKRRRHVKPECLLDDGL*VGQMVKIVL 380
Score = 25.4 bits (49), Expect(2) = 0.057
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 843 MAHTLTMTREPLGTE*PPTTQS 778
+A LTMTR P G *P TQS
Sbjct: 546 IARLLTMTRVPDGMV*PFMTQS 481
>gb|BE421103.1|BE421103 HWM005.G12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.G12, mRNA sequence
Length = 1114
Score = 59.3 bits (123), Expect(2) = 5e-011
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 124 LVPNSCSPGDPLVLERPPPRW 62
Score = 55.1 bits (114), Expect = 8e-007
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRH+
Sbjct: 62 PPRWRPL*N*WIPRAAGIRHQ 124
Score = 50.6 bits (104), Expect(2) = 5e-006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -1 / -2
Query: 61 CRIPAARGIH*F*SGRHRGG 2
CRIPAARGIH*F*SGRHRGG
Sbjct: 120 CRIPAARGIH*F*SGRHRGG 61
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 61 STAVAAALELVDPPGCRN 114
Score = 32.2 bits (64), Expect(2) = 5e-011
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / -3
Query: 1358 FFFFFLRIKKIDNGCLQHT 1302
FFFFFL KK+ LQHT
Sbjct: 434 FFFFFLNCKKLKRDSLQHT 378
Score = 24.0 bits (46), Expect(2) = 5e-006
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1 / -2
Query: 1228 YPTPTRGDDGNGSRPRMAS 1172
YP G D GSR R+A+
Sbjct: 1017 YPRTRIGSDARGSRERLAA 961
>gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D01V 5', mRNA sequence
Length = 689
Score = 68.9 bits (144), Expect = 6e-011
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 344 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 523
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 524 LERLPYLQSVVKET 565
Score = 38.6 bits (78), Expect = 0.078
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1 / -2
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + E LL D L+ GE +QVRL H +A +LL Q
Sbjct: 595 QERDGHAEAEXLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 467
>gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05I23V 5', mRNA sequence
Length = 667
Score = 68.9 bits (144), Expect = 6e-011
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 362 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 541
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 542 LERLPYLQSVVKET 583
Score = 35.4 bits (71), Expect = 0.72
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 739 QPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
+ ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 592 EAERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 485
>gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001L18f, mRNA sequence
Length = 530
Score = 68.9 bits (144), Expect = 6e-011
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 22 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 201
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 202 LERLPYLQSVVKET 243
Score = 40.9 bits (83), Expect = 0.016
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1 / -3
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
++RD + ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 273 QERDGHAERERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 145
>gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 5', mRNA sequence
Length = 570
Score = 68.9 bits (144), Expect = 6e-011
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 346 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 525
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V+KET
Sbjct: 526 LERLPYLQSVVKET 567
Score = 35.0 bits (70), Expect = 0.99
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1 / -1
Query: 733 ERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQ 632
ERLL D L+ GE +QVRL H +A +LL Q
Sbjct: 570 ERLLHDGLQVGEALQVRLRHRRARAQHGDDLLAQ 469
>gb|BE519842.2|BE519842 HV_CEb0021G19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021G19f, mRNA sequence
Length = 611
Score = 45.1 bits (92), Expect(2) = 1e-010
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2 / +3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
D +G Y+VP+ ++V V G + W + FRP RF GE G+D G
Sbjct: 102 DTDIGDYTVPKDAQVHFLVADYGLDESVWTEPHEFRPERFLDGGEGCGVDVTG 260
Score = 41.4 bits (84), Expect(2) = 1e-010
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / +3
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
+ +PFG+GRR CPG +L LE V L F W
Sbjct: 273 KMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQW 377
Score = 28.1 bits (55), Expect(2) = 0.35
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 987 PGHERRPEPKG 955
PGH RRP PKG
Sbjct: 313 PGHNRRPAPKG 281
Score = 25.8 bits (50), Expect(2) = 0.35
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / -2
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRN+ S H P + T T LGT * P + S
Sbjct: 217 RSGRNSCGSVHTDSSSP*SATRKWTWASLGTV*SPMSVS 101
>gb|CA016384.1|CA016384 HV09C09u HV Hordeum vulgare subsp. vulgare cDNA clone HV09C09
3-PRIME, mRNA sequence
Length = 509
Score = 45.1 bits (92), Expect(2) = 1e-010
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2 / -2
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
D +G Y+VP+ ++V V G + W + FRP RF GE G+D G
Sbjct: 490 DTDIGDYTVPKDAQVHFLVADYGLDESVWTEPHEFRPERFLDGGEGCGVDVTG 332
Score = 41.4 bits (84), Expect(2) = 1e-010
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2 / -2
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
+ +PFG+GRR CPG +L LE V L F W
Sbjct: 319 KMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQW 215
Score = 28.1 bits (55), Expect(2) = 0.35
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 987 PGHERRPEPKG 955
PGH RRP PKG
Sbjct: 279 PGHNRRPAPKG 311
Score = 25.8 bits (50), Expect(2) = 0.35
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2 / +3
Query: 894 RDGRNASASFHEARWRPMAHTLTMTREPLGTE*PPTTQS 778
R GRN+ S H P + T T LGT * P + S
Sbjct: 375 RSGRNSCGSVHTDSSSP*SATRKWTWASLGTV*SPMSVS 491
>gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57B14
5-PRIME, mRNA sequence
Length = 400
Score = 67.5 bits (141), Expect = 2e-010
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +2 / +2
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ II ++ ET +IEW +AE+++ P+ ++L+ E+ V+G+ + E D
Sbjct: 167 INEDNVLYIIENINVAAIETTLWSIEWGLAELVNHPEIQQKLRDEMDAVLGVGHQITEPD 346
Query: 689 LDKLPFLKCVIKET 730
+LP+L+ VIKET
Sbjct: 347 THRLPYLQAVIKET 388
>gb|BE421270.1|BE421270 HWM007.E11 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.E11, mRNA sequence
Length = 824
Score = 59.3 bits (123), Expect(2) = 2e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 118 LVPNSCSPGDPLVLERPPPRW 56
Score = 40.9 bits (83), Expect = 0.016
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPR RPL*N* I RAAGIRHE
Sbjct: 56 PPRXRPL*N*XISRAAGIRHE 118
Score = 40.5 bits (82), Expect = 0.022
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAAR I *F*SGR RGG
Sbjct: 117 SCRIPAAREIX*F*SGRXRGG 55
Score = 35.9 bits (72), Expect = 0.52
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STA AAALEL D PGCRN
Sbjct: 55 STAXAAALELXDLPGCRN 108
Score = 29.9 bits (59), Expect(2) = 2e-010
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -1
Query: 261 TTLKAPNSFENSCRMAMNSSWSSPSRVPKA 172
T L +P F S + + ++WSSPSRV K+
Sbjct: 485 TVLVSP*YFSASVGLLILAAWSSPSRVAKS 396
>gb|BE421429.1|BE421429 HWM009.C02 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM009.C02, mRNA sequence
Length = 828
Score = 59.3 bits (123), Expect(2) = 2e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 109 LVPNSCSPGDPLVLERPPPRW 47
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 47 PPRWRPL*N*WIPRAAGIRHE 109
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 108 SCRIPAARGIH*F*SGRHRGG 46
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 46 STAVAAALELVDPPGCRN 99
Score = 29.9 bits (59), Expect(2) = 2e-010
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 261 TTLKAPNSFENSCRMAMNSSWSSPSRVPKA 172
T L +P F S + + ++WSSPSRV K+
Sbjct: 374 TVLVSP*YFSASVGLLILAAWSSPSRVAKS 285
>gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
3-PRIME, mRNA sequence
Length = 538
Score = 48.3 bits (99), Expect(2) = 2e-010
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / -2
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 447 EEKSVEAHGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFELLPPPG 292
Score = 37.3 bits (75), Expect(2) = 2e-010
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2 / -2
Query: 815 SRVMVNVWAIGRHRASWKDADAFRPSRFTPE 907
S+++VN W + W AD FRP RF E
Sbjct: 537 SKILVNAWFLANDPKRWVRADEFRPERFLEE 445
>gb|BE421330.1|BE421330 HWM008.B11 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM008.B11, mRNA sequence
Length = 1125
Score = 59.3 bits (123), Expect(2) = 3e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 116 LVPNSCSPGDPLVLERPPPRW 54
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 54 PPRWRPL*N*WIPRAAGIRHE 116
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 115 SCRIPAARGIH*F*SGRHRGG 53
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 53 STAVAAALELVDPPGCRN 106
Score = 29.9 bits (59), Expect(2) = 3e-010
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 261 TTLKAPNSFENSCRMAMNSSWSSPSRVPKA 172
T L +P F S + + ++WSSPSRV K+
Sbjct: 407 TVLVSP*YFSASVGLLILAAWSSPSRVAKS 318
>gb|BE421672.1|BE421672 HWM012cF.07r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM012cF.07, mRNA sequence
Length = 1209
Score = 59.3 bits (123), Expect(2) = 3e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 120 LVPNSCSPGDPLVLERPPPRW 58
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 58 PPRWRPL*N*WIPRAAGIRHE 120
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 119 SCRIPAARGIH*F*SGRHRGG 57
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 57 STAVAAALELVDPPGCRN 110
Score = 29.9 bits (59), Expect(2) = 3e-010
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 261 TTLKAPNSFENSCRMAMNSSWSSPSRVPKA 172
T L +P F S + + ++WSSPSRV K+
Sbjct: 401 TVLVSP*YFSASVGLLILAAWSSPSRVAKS 312
>gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002K17f, mRNA sequence
Length = 772
Score = 46.9 bits (96), Expect(2) = 4e-010
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2 / +2
Query: 767 ETAGDCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKG 937
+ A D VGGY +P+G+ V V + R W+ F P RF P G +D G
Sbjct: 113 KAAEDMEVGGYLIPKGATVNFMVAEMSRDEREWEKPTEFVPERFLPGGAGEAVDVTG 283
Score = 37.7 bits (76), Expect(2) = 4e-010
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2 / +2
Query: 947 EFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNW 1051
+ +PFG GR+ C G + + LE VA + F W
Sbjct: 296 KMMPFGVGRKICAGLGIAMLHLEYFVANMVREFEW 400
>gb|BF259330.2|BF259330 HVSMEf0019E22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019E22f, mRNA sequence
Length = 527
Score = 65.7 bits (137), Expect = 6e-010
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
LT +NIK +I+D++ +ET ++ + WAMAE++ P ++R Q E+ + V E
Sbjct: 225 LTTENIKLVIIDMISASSETTSTTLVWAMAELLRKPAAMQRAQDEVRRQLNGHLRVTEDG 404
Query: 689 LDKLPFLKCVIKET 730
L L +L+ VIKET
Sbjct: 405 LTDLHYLRLVIKET 446
Score = 33.6 bits (67), Expect = 2.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -1 / -1
Query: 760 EQRDRRVQPERLLDDALEEGELVQVRLVHVPVQAHDVGELLLQP 629
+Q RRVQPERLLDD + ++ L H V +L+L+P
Sbjct: 476 DQHHRRVQPERLLDD*PQVVQVC*AVLRHPEVAVELPPDLVLRP 345
>gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014P23f, mRNA sequence
Length = 574
Score = 65.7 bits (137), Expect = 6e-010
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +2 / +3
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNESD 688
+ DN+ I+ ++ ET +IEW +AE+++ P+ ++L++E+ V+G V E D
Sbjct: 336 INHDNVLYIVENINVAAIETTLWSIEWGLAELVNHPEIQQKLREEIVAVLGPGTPVTEPD 515
Query: 689 LDKLPFLKCVIKET 730
L++LP+L+ V KET
Sbjct: 516 LERLPYLQSVGKET 557
>gb|BE427743.1|BE427743 PSR6690 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6690, mRNA sequence
Length = 1034
Score = 59.3 bits (123), Expect(2) = 6e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 118 LVPNSCSPGDPLVLERPPPRW 56
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 56 PPRWRPL*N*WIPRAAGIRHE 118
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 117 SCRIPAARGIH*F*SGRHRGG 55
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 55 STAVAAALELVDPPGCRN 108
Score = 28.6 bits (56), Expect(2) = 6e-010
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1 / -3
Query: 1180 MASVQGAVEPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDG 1019
+ +V AV G R RG+ + HV L G H V + V A ELG G
Sbjct: 582 LEAVVAAVASGGGAVPLQRAPVRGDGDADGHVGLVGAHLVVRAAVVAQVELGHG 421
>gb|BE427871.1|BE427871 PSR6875 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6875, mRNA sequence
Length = 1218
Score = 59.3 bits (123), Expect(2) = 7e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 119 LVPNSCSPGDPLVLERPPPRW 57
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 57 PPRWRPL*N*WIPRAAGIRHE 119
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 118 SCRIPAARGIH*F*SGRHRGG 56
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 56 STAVAAALELVDPPGCRN 109
Score = 28.6 bits (56), Expect(2) = 7e-010
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1 / -3
Query: 1180 MASVQGAVEPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDG 1019
+ +V AV G R RG+ + HV L G H V + V A ELG G
Sbjct: 583 LEAVVAAVASGGGAVPLQRAPVRGDGDADGHVGLVGAHLVVRAAVVAQVELGHG 422
>gb|BE427848.1|BE427848 PSR6846 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6846, mRNA sequence
Length = 1223
Score = 59.3 bits (123), Expect(2) = 7e-010
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 117 LVPNSCSPGDPLVLERPPPRW 55
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 55 PPRWRPL*N*WIPRAAGIRHE 117
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 116 SCRIPAARGIH*F*SGRHRGG 54
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 54 STAVAAALELVDPPGCRN 107
Score = 28.6 bits (56), Expect(2) = 7e-010
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1 / -1
Query: 1180 MASVQGAVEPGRRHGVEPRGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDG 1019
+ +V AV G R RG+ + HV L G H V + V A ELG G
Sbjct: 581 LEAVVAAVASGGGAVPLQRAPVRGDGDADGHVGLVGAHLVVRAAVVAQVELGHG 420
>gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_B10 5', mRNA sequence
Length = 537
Score = 47.3 bits (97), Expect(2) = 8e-010
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2 / +1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
E ++ G F F+PFG GRRSCPG L L + + + +L F P G
Sbjct: 88 EERAVEANGNDFRFVPFGVGRRSCPGIILALPIIGITLGRLVQNFQLLPPLG 243
Score = 36.3 bits (73), Expect(2) = 8e-010
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2 / +1
Query: 818 RVMVNVWAIGRHRASWKDADAFRPSRFTPEGEA 916
+++VN W + W AD FRP RF E A
Sbjct: 1 KILVNAWFLANDPKRWVRADEFRPERFLEEERA 99
>gb|AL511075.1|AL511075 AL511075 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06O14u 3',
mRNA sequence
Length = 505
Score = 46.4 bits (95), Expect(2) = 8e-010
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLA 1036
+DF G FE LPFG+G R CPG A+ + +E Q A
Sbjct: 495 IDFSGAHFELLPFGTGXRVCPGLAMAVSNIEFIXGQHA 382
Score = 37.3 bits (75), Expect(2) = 8e-010
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2 / -3
Query: 1019 AVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVPT 1147
+ A + + FNW LPDG++ ++ + + LT + L VPT
Sbjct: 398 SXANMLYCFNWKLPDGVRSEDVSVEEAGALTFRKKAPLVLVPT 270
>gb|BI958140.1|BI958140 HVSMEn0013J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013J13f, mRNA sequence
Length = 867
Score = 49.6 bits (102), Expect(2) = 9e-010
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELA 649
++T ++KA+I+++ GTET ++ +EWA+AE++ P Q ELA
Sbjct: 365 KITDTDVKALILNLFVAGTETTSTIVEWALAELIRHPGHA*AAQDELA 508
Score = 37.3 bits (75), Expect(2) = 9e-010
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 203 EEFIAILQEFSKLFGAFNVVDFLPWLSWMDLQGI 304
+EF I+ E ++ G NV DF+P L W++ QG+
Sbjct: 89 QEFKEIVLEVMEVGGVLNVGDFVPALXWLERQGV 190
>gb|BE427858.1|BE427858 PSR6860 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6860, mRNA sequence
Length = 1202
Score = 59.3 bits (123), Expect(2) = 1e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 115 LVPNSCSPGDPLVLERPPPRW 53
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 53 PPRWRPL*N*WIPRAAGIRHE 115
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 114 SCRIPAARGIH*F*SGRHRGG 52
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 52 STAVAAALELVDPPGCRN 105
Score = 28.1 bits (55), Expect(2) = 1e-009
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1 / -3
Query: 1126 RGARRGEAEDVAHVQLRGLHAVGQRPVEAVRELGDG 1019
R RG+ + HV L G H V + V A ELG G
Sbjct: 525 RAPVRGDGDADGHVGLVGAHLVVRAAVVAQVELGHG 418
>gb|BU976859.1|BU976859 HA10H02r HA Hordeum vulgare subsp. vulgare cDNA clone HA10H02
5-PRIME, mRNA sequence
Length = 363
Score = 64.8 bits (135), Expect = 1e-009
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2 / +3
Query: 974 RSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVPTPR 1153
R CPG +L + +ELA+A L F+W LP G +P ++DM + FG+T R ++L+
Sbjct: 12 RMCPGVSLAMANMELALAGLLFHFDWELPCGARPQDMDMAETFGITVRRKSKLWLHAESH 191
Query: 1154 LNC 1162
+ C
Sbjct: 192 VPC 200
Score = 36.8 bits (74), Expect = 0.28
Identities = 21/44 (47%), Positives = 22/44 (50%)
Frame = -2 / -3
Query: 1110 VRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGH 979
V PK S MS S G P GS Q K A+ASS S PGH
Sbjct: 148 VIPKVSAMSISCGLAPQGSSQSKWKRRPASASSMLAMASDTPGH 17
>gb|BU976860.1|BU976860 HA10H02u HA Hordeum vulgare subsp. vulgare cDNA clone HA10H02
3-PRIME, mRNA sequence
Length = 363
Score = 64.8 bits (135), Expect = 1e-009
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2 / -3
Query: 974 RSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVPTPR 1153
R CPG +L + +ELA+A L F+W LP G +P ++DM + FG+T R ++L+
Sbjct: 352 RMCPGVSLAMANMELALAGLLFHFDWELPCGARPQDMDMAETFGITVRRKSKLWLHAESH 173
Query: 1154 LNC 1162
+ C
Sbjct: 172 VPC 164
Score = 36.8 bits (74), Expect = 0.28
Identities = 21/44 (47%), Positives = 22/44 (50%)
Frame = -2 / +3
Query: 1110 VRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGH 979
V PK S MS S G P GS Q K A+ASS S PGH
Sbjct: 216 VIPKVSAMSISCGLAPQGSSQSKWKRRPASASSMLAMASDTPGH 347
>gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ003_O03 5', mRNA sequence
Length = 424
Score = 64.3 bits (134), Expect = 1e-009
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = +2 / +3
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDRNVNES 685
RL + + + +VM GT+T A+A+EW M ++ P R+ E+ G + E+
Sbjct: 132 RLGEEELVTLCSEVMSAGTDTSATALEWVMMHLILDPAAQERVYDEVVAKAGKTARITEA 311
Query: 686 DLDKLPFLKCVIKET 730
D++ LP+L+ V+KET
Sbjct: 312 DVESLPYLQAVVKET 356
>gb|CB875167.1|CB875167 HX07H18w HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
3-PRIME, mRNA sequence
Length = 636
Score = 64.3 bits (134), Expect = 1e-009
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +2 / -2
Query: 833 VWAIGRHRASWKDADAFRPSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYAL 1012
+WAI W + + FRP RF AA L G PFG+GRRSCPG +L + +
Sbjct: 635 MWAITHDPDVWAEPEEFRPERFVAGQPAAELSVMGSDLRLAPFGAGRRSCPGKSLAMATV 456
Query: 1013 ELAVAQLAH 1039
+A L H
Sbjct: 455 AFWLATLLH 429
Score = 35.9 bits (72), Expect = 0.52
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = -2 / +1
Query: 1038 CASWATASSSAYRPSAVPGHERRPEPKGRNXXXXXXXXXXXXXXSGVKRDGRNASASFHE 859
C+S A+ +++ PG RP P G R GRN+S S H
Sbjct: 430 CSSVASQNATVAIARLFPGQLLRPAPNGARRRSDPITESSAAGCPATNRSGRNSSGSAHT 609
Query: 858 ARWRPMAH 835
+ MAH
Sbjct: 610 SGSWVMAH 633
>gb|AV919038.1|AV919038 AV919038 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4c12 3', mRNA sequence
Length = 614
Score = 63.8 bits (133), Expect = 2e-009
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +2 / -2
Query: 923 LDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
+DF+G E +PFG+GRR CPG G+ LE+ +A L F+W LP G
Sbjct: 613 VDFRGANLELVPFGAGRRMCPGITFGVKVLEVMLASLLFHFDWELPGG 470
Score = 35.0 bits (70), Expect = 0.99
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2 / +3
Query: 1098 TSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAVPGHERRPEPKG 955
+S + SS P GS Q K A+ +S P+ +PGH P P G
Sbjct: 438 SSSVMSSPSAPPPGSSQSKWNNKLASMTSRTLTPNVIPGHILLPAPNG 581
>gb|BE421637.1|BE421637 HWM012cB.11r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM012cB.11, mRNA sequence
Length = 1430
Score = 59.3 bits (123), Expect(2) = 2e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 126 LVPNSCSPGDPLVLERPPPRW 64
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 64 PPRWRPL*N*WIPRAAGIRHE 126
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 125 SCRIPAARGIH*F*SGRHRGG 63
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 63 STAVAAALELVDPPGCRN 116
Score = 27.2 bits (53), Expect(2) = 2e-009
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3 / -1
Query: 1358 FFFFFLRIKKIDNGCLQHTLQHRPGMFFKGKKDDRE 1251
FFFFF + K N C +Q + F K + E
Sbjct: 416 FFFFFFQAKNWINRCAITNIQRQDSTFNSSKHQEFE 309
>gb|BE421019.1|BE421019 HWM004.H12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.H12, mRNA sequence
Length = 798
Score = 59.3 bits (123), Expect(2) = 2e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 157 LVPNSCSPGDPLVLERPPPRW 95
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 95 PPRWRPL*N*WIPRAAGIRHE 157
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 156 SCRIPAARGIH*F*SGRHRGG 94
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 94 STAVAAALELVDPPGCRN 147
Score = 26.3 bits (51), Expect(2) = 2e-009
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 1358 FFFFFLRIKKIDNG 1317
FFFFFL K DNG
Sbjct: 727 FFFFFLGTNKKDNG 686
>gb|BG416626.2|BG416626 HVSMEk0013K23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0013K23f, mRNA sequence
Length = 701
Score = 45.1 bits (92), Expect(2) = 3e-009
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +2 / +2
Query: 506 RLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVVGLDR 670
+++ ++ A++ +++F GT+TVA +EW MA M+ P+ + EL VVG R
Sbjct: 458 KMSESDMIAVLWEMIFRGTDTVAILMEWIMARMVLHPEIHSKAVPELDPVVGRGR 622
Score = 40.0 bits (81), Expect(2) = 3e-009
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2 / +2
Query: 218 ILQEFSKLFGAFNVVDFLPWLSWMDLQGINXXXXXXXXXXXXFIDKIIDEHVRR 379
++ E L G FN D LP+L +DLQG+ ++ II EH R
Sbjct: 218 MVNEGYDLLGTFNWADHLPFLKCLDLQGVRRRCNRLVRQVEAYVGNIIQEHKAR 379
>gb|BE421903.1|BE421903 HWM016cC.09r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM016cC.09, mRNA sequence
Length = 882
Score = 59.3 bits (123), Expect(2) = 3e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 126 LVPNSCSPGDPLVLERPPPRW 64
Score = 46.4 bits (95), Expect(2) = 3e-004
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPR R L*N*WIPRAAGIRHE
Sbjct: 64 PPRRRTL*N*WIPRAAGIRHE 126
Score = 43.2 bits (88), Expect = 0.003
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*S R RGG
Sbjct: 125 SCRIPAARGIH*F*SVRLRGG 63
Score = 39.6 bits (80), Expect = 0.041
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STA A ALELVDPPGCRN
Sbjct: 63 STAEADALELVDPPGCRN 116
Score = 25.8 bits (50), Expect(2) = 3e-009
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3 / -1
Query: 1358 FFFFFLRIKKIDNGCLQHTLQH 1293
FFFFF +GC++ L H
Sbjct: 531 FFFFFFFXXXCTSGCIESPLVH 466
Score = 21.7 bits (41), Expect(2) = 3e-004
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 301 HQPPPPRRTIRA 336
H PPPP++ +A
Sbjct: 766 HPPPPPKKRQKA 801
>gb|BJ474172.1|BJ474172 BJ474172 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19g12 3', mRNA sequence
Length = 717
Score = 44.1 bits (90), Expect(2) = 4e-009
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2 / -1
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEG 910
D ++G Y + RG + +++W + R W DAD F P R+ +G
Sbjct: 609 DDMLGEYPIGRGEDIFISIWNLHRCPNHWDDADVFNPERWPLDG 478
Score = 37.3 bits (75), Expect(2) = 4e-009
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2 / -1
Query: 944 FEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKP 1075
F ++PFG G R C G + +A A L F++ + G P
Sbjct: 450 FSYIPFGGGPRKCVGDMFATFENVVATAMLVKRFDFQMAPGAPP 319
>gb|AV928039.1|AV928039 AV928039 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13l06 3', mRNA sequence
Length = 425
Score = 62.9 bits (131), Expect = 4e-009
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2 / -1
Query: 911 EAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDM 1090
E + +DFKG FE PFG+GRR C ++ +E +A L + F W+LP+GM S +
Sbjct: 389 EMSKIDFKGTHFELTPFGAGRRICXALSMSTATVEFTLANLLYRFQWTLPEGMVVSMEEE 210
Query: 1091 GDVFGL 1108
G + L
Sbjct: 209 GKLVPL 192
>gb|AV935809.1|AV935809 AV935809 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6i06 3', mRNA sequence
Length = 683
Score = 44.1 bits (90), Expect(2) = 4e-009
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2 / -3
Query: 779 DCVVGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRFTPEG 910
D ++G Y + RG + +++W + R W DAD F P R+ +G
Sbjct: 621 DDMLGEYPIGRGEDIFISIWNLHRCPNHWDDADVFNPERWPLDG 490
Score = 37.3 bits (75), Expect(2) = 4e-009
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2 / -3
Query: 944 FEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKP 1075
F ++PFG G R C G + +A A L F++ + G P
Sbjct: 462 FSYIPFGGGPRKCVGDMFATFENVVATAMLVKRFDFQMAPGAPP 331
>gb|BE421962.1|BE421962 HWM017cD.04r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM017cD.04, mRNA sequence
Length = 1258
Score = 59.3 bits (123), Expect(2) = 5e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 126 LVPNSCSPGDPLVLERPPPRW 64
Score = 53.8 bits (111), Expect = 2e-006
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIR+E
Sbjct: 64 PPRWRPL*N*WIPRAAGIRYE 126
Score = 47.3 bits (97), Expect = 2e-004
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
S RIPAARGIH*F*SGRHRGG
Sbjct: 125 SYRIPAARGIH*F*SGRHRGG 63
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 63 STAVAAALELVDPPGCRN 116
Score = 25.8 bits (50), Expect(2) = 5e-009
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3 / -3
Query: 1358 FFFFFLRIKKIDNGCLQHTLQH 1293
FFFFF +GC++ L H
Sbjct: 509 FFFFFFFXXXXTSGCIESPLVH 444
>gb|BQ471837.1|BQ471837 HV03K07r HV Hordeum vulgare subsp. vulgare cDNA clone HV03K07
5-PRIME, mRNA sequence
Length = 513
Score = 44.6 bits (91), Expect(2) = 5e-009
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +2 / +1
Query: 149 TKNVTFRAAFGTRDGEDQEEFIAILQEFSKLFGAFNVVDFLPWLSWMDLQGINXXXXXXX 328
TK A T + +EF ++ E GA N D+LP + W D+ G+
Sbjct: 61 TKGTRSEADADTDMSVEAQEFKKVVDEIIPYLGAANTWDYLPVMRWFDVFGVRNKILAAV 240
Query: 329 XXXXXFIDKIIDEHVRR 379
F+ ++ID RR
Sbjct: 241 SRRDAFLHRLIDAERRR 291
Score = 39.1 bits (79), Expect(2) = 5e-009
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2 / +1
Query: 524 IKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQEL 646
I A+ ++ GTET ++ EWAM+ +++ P LR+ Q E+
Sbjct: 388 ITALCANLFGAGTETTSTTTEWAMSLLLNHPAALRKAQAEI 510
>gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene oxidase 1 (KO1) mRNA,
partial cds
Length = 1595
Score = 41.8 bits (85), Expect(2) = 5e-009
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2 / +2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+ GY VP G+ +++N++ ++ W++ + +RP RF
Sbjct: 1097 LAGYDVPAGTEIVINLYGCNMNKKDWEEPEEWRPERF 1207
Score = 39.1 bits (79), Expect(2) = 5e-009
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2 / +2
Query: 887 PSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
P + PE G ++ + FG+GRRSC G+ A+A+ F W L +G
Sbjct: 1181 PEEWRPERFMDGRFEAADMYKTMAFGAGRRSCAGSLQATSISCAAIARFVQDFAWRLKEG 1360
>gb|CV063618.1|CV063618 BNEL91c9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL91c9 5' similar to ent-kaurene
oxidase, mRNA sequence
Length = 730
Score = 41.8 bits (85), Expect(2) = 5e-009
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2 / -2
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+ GY VP G+ +++N++ ++ W++ + +RP RF
Sbjct: 513 LAGYDVPAGTEIVINLYGCNMNKKDWEEPEEWRPERF 403
Score = 39.1 bits (79), Expect(2) = 5e-009
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2 / -2
Query: 887 PSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
P + PE G ++ + FG+GRRSC G+ A+A+ F W L +G
Sbjct: 429 PEEWRPERFMDGRFEAADMYKTMAFGAGRRSCAGSLQATSISCAAIARFVQDFAWRLKEG 250
>gb|CV058216.1|CV058216 BNEL35f11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35f11 5' similar to ent-kaurene
oxidase, mRNA sequence
Length = 566
Score = 41.8 bits (85), Expect(2) = 5e-009
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2 / -1
Query: 788 VGGYSVPRGSRVMVNVWAIGRHRASWKDADAFRPSRF 898
+ GY VP G+ +++N++ ++ W++ + +RP RF
Sbjct: 452 LAGYDVPAGTEIVINLYGCNMNKKDWEEPEEWRPERF 342
Score = 39.1 bits (79), Expect(2) = 5e-009
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2 / -1
Query: 887 PSRFTPEGEAAGLDFKGGCFEFLPFGSGRRSCPGTALGLYALELAVAQLAHGFNWSLPDG 1066
P + PE G ++ + FG+GRRSC G+ A+A+ F W L +G
Sbjct: 368 PEEWRPERFMDGRFEAADMYKTMAFGAGRRSCAGSLQATSISCAAIARFVQDFAWRLKEG 189
>gb|AV921067.1|AV921067 AV921067 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16m22 3', mRNA sequence
Length = 493
Score = 62.5 bits (130), Expect = 5e-009
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2 / -2
Query: 971 RRSCPGTALGLYALELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVPTP 1150
RR CPG LG+ + + + H F WSLP G +P ++ M + GL T L A+ TP
Sbjct: 492 RRVCPGAQLGINLVASMIGHMLHHFKWSLPXGTRPEDISMMESPGLVTFMGTPLQAIATP 313
Query: 1151 RL 1156
RL
Sbjct: 312 RL 307
>gb|BE427769.1|BE427769 PSR6728 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6728, mRNA sequence
Length = 1037
Score = 59.3 bits (123), Expect(2) = 5e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 114 LVPNSCSPGDPLVLERPPPRW 52
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 52 PPRWRPL*N*WIPRAAGIRHE 114
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 113 SCRIPAARGIH*F*SGRHRGG 51
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 51 STAVAAALELVDPPGCRN 104
Score = 25.4 bits (49), Expect(2) = 5e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 216 GRRCRGSPEGSRCGESEIRSRIRRRG 139
>gb|BE421425.1|BE421425 HWM009.B10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM009.B10, mRNA sequence
Length = 826
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 123 LVPNSCSPGDPLVLERPPPRW 61
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 61 PPRWRPL*N*WIPRAAGIRHE 123
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 122 SCRIPAARGIH*F*SGRHRGG 60
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 60 STAVAAALELVDPPGCRN 113
Score = 24.9 bits (48), Expect(2) = 6e-009
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1 / -1
Query: 1111 GEAEDVAHVQLRGLHAVGQRPVEA 1040
GE DVA V+ G+H VG EA
Sbjct: 271 GEHHDVALVERLGVHGVGGGADEA 200
>gb|BE427878.1|BE427878 PSR6884 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6884, mRNA sequence
Length = 1203
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 112 LVPNSCSPGDPLVLERPPPRW 50
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 50 PPRWRPL*N*WIPRAAGIRHE 112
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 111 SCRIPAARGIH*F*SGRHRGG 49
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 49 STAVAAALELVDPPGCRN 102
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 214 GRRCRGSPEGSRCGESEIRSRIRRRG 137
>gb|BE427893.1|BE427893 PSR7387 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR7387, mRNA sequence
Length = 1206
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 111 LVPNSCSPGDPLVLERPPPRW 49
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 49 PPRWRPL*N*WIPRAAGIRHE 111
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 110 SCRIPAARGIH*F*SGRHRGG 48
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 48 STAVAAALELVDPPGCRN 101
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 213 GRRCRGSPEGSRCGESEIRSRIRRRG 136
>gb|BE427874.1|BE427874 PSR6878 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6878, mRNA sequence
Length = 1225
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 113 LVPNSCSPGDPLVLERPPPRW 51
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 51 PPRWRPL*N*WIPRAAGIRHE 113
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 112 SCRIPAARGIH*F*SGRHRGG 50
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 50 STAVAAALELVDPPGCRN 103
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 215 GRRCRGSPEGSRCGESEIRSRIRRRG 138
>gb|CB858927.1|CB858927 HI08L23w HI Hordeum vulgare subsp. vulgare cDNA clone HI08L23
3-PRIME, mRNA sequence
Length = 663
Score = 44.6 bits (91), Expect(2) = 6e-009
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +2 / -2
Query: 1013 ELAVAQLAHGFNWSLPDGMKPSELDMGDVFGLTAPRATRLYAVPTPRL 1156
EL H F W+LPDG + +LDM + GL T L V TPRL
Sbjct: 347 ELVRNPRVHHFTWALPDGARTEDLDMMESPGLITFMRTPLQVVATPRL 204
Score = 39.1 bits (79), Expect(2) = 6e-009
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 491 LHNTLRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSP 616
L + L+ D + ++ D++ GT+T +EWA+AE++ +P
Sbjct: 455 LRDKYDLSDDTVIGLLWDMITAGTDTTVITVEWAVAELVRNP 330
Score = 34.1 bits (68), Expect = 1.9
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -2 / +1
Query: 1152 RGVGTA*SLVARGAVRPKTSPMSSSEGFMPSGSDQLKPCASWATASSSAYRPSAV 988
RGV T S V + P S MS S PSGS Q+K C SS+ + +
Sbjct: 208 RGVATTCSGVRMNVISPGDSIMSRSSVRAPSGSAQVKWCTLGFLTSSATAHSTVI 372
>gb|BE427852.1|BE427852 PSR6853 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6853, mRNA sequence
Length = 1245
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 119 LVPNSCSPGDPLVLERPPPRW 57
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 57 PPRWRPL*N*WIPRAAGIRHE 119
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 118 SCRIPAARGIH*F*SGRHRGG 56
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 56 STAVAAALELVDPPGCRN 109
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 221 GRRCRGSPEGSRCGESEIRSRIRRRG 144
>gb|BE427847.1|BE427847 PSR6845 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6845, mRNA sequence
Length = 1248
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 114 LVPNSCSPGDPLVLERPPPRW 52
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 52 PPRWRPL*N*WIPRAAGIRHE 114
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 113 SCRIPAARGIH*F*SGRHRGG 51
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 51 STAVAAALELVDPPGCRN 104
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 216 GRRCRGSPEGSRCGESEIRSRIRRRG 139
>gb|BE427879.1|BE427879 PSR6885 ITEC PSR Barley Inflorescence Library Hordeum vulgare
subsp. vulgare cDNA clone PSR6885, mRNA sequence
Length = 1279
Score = 59.3 bits (123), Expect(2) = 6e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 118 LVPNSCSPGDPLVLERPPPRW 56
Score = 56.5 bits (117), Expect(2) = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 56 PPRWRPL*N*WIPRAAGIRHE 118
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 117 SCRIPAARGIH*F*SGRHRGG 55
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 55 STAVAAALELVDPPGCRN 108
Score = 25.4 bits (49), Expect(2) = 6e-009
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 1150 GRRHGVEPRGARRGEAEDVAHVQLRG 1073
GRR P G+R GE+E + ++ RG
Sbjct: 220 GRRCRGSPEGSRCGESEIRSRIRRRG 143
Score = 22.6 bits (43), Expect(2) = 3e-007
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 1179 MRGRLPLPSSPRVGVGY 1229
+RG P P +PR +G+
Sbjct: 128 LRGSAPTPPNPRPDLGF 178
>gb|BE421536.1|BE421536 HWM010.D01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM010.D01, mRNA sequence
Length = 966
Score = 59.3 bits (123), Expect(2) = 7e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 126 LVPNSCSPGDPLVLERPPPRW 64
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 64 PPRWRPL*N*WIPRAAGIRHE 126
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 125 SCRIPAARGIH*F*SGRHRGG 63
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 63 STAVAAALELVDPPGCRN 116
Score = 24.9 bits (48), Expect(2) = 7e-009
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1 / -1
Query: 1111 GEAEDVAHVQLRGLHAVGQRPVEA 1040
GE DVA V+ G+H VG EA
Sbjct: 387 GEHHDVALVERLGVHGVGGGADEA 316
>gb|BE421519.1|BE421519 HWM010.B08 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM010.B08, mRNA sequence
Length = 994
Score = 59.3 bits (123), Expect = 5e-008
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 111 LVPNSCSPGDPLVLERPPPRW 49
Score = 56.5 bits (117), Expect(2) = 7e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +1
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 49 PPRWRPL*N*WIPRAAGIRHE 111
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 110 SCRIPAARGIH*F*SGRHRGG 48
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +3
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 48 STAVAAALELVDPPGCRN 101
Score = 27.6 bits (54), Expect(2) = 7e-009
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 344 FIDKIIDEHVRRGK 385
F++++ DEHVRR K
Sbjct: 169 FVERVFDEHVRRSK 210
>gb|BE421886.1|BE421886 HWM016cA.12r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM016cA.12, mRNA sequence
Length = 733
Score = 59.3 bits (123), Expect(2) = 7e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 127 LVPNSCSPGDPLVLERPPPRW 65
Score = 46.4 bits (95), Expect = 4e-004
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPR R L*N*WIPRAAGIRHE
Sbjct: 65 PPRRRTL*N*WIPRAAGIRHE 127
Score = 43.2 bits (88), Expect = 0.003
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*S R RGG
Sbjct: 126 SCRIPAARGIH*F*SVRLRGG 64
Score = 39.6 bits (80), Expect = 0.041
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STA A ALELVDPPGCRN
Sbjct: 64 STAEADALELVDPPGCRN 117
Score = 24.4 bits (47), Expect(2) = 7e-009
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 1358 FFFFFLRIKKI 1326
FFFFFLRI ++
Sbjct: 717 FFFFFLRITRV 685
>gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 5', mRNA sequence
Length = 523
Score = 43.2 bits (88), Expect(3) = 7e-009
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 509 LTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRLQQELADVV 658
LTRD+IKA ++ + GT+T +E+AM +M +P + LQ E+ +
Sbjct: 181 LTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTI 330
Score = 29.9 bits (59), Expect(3) = 7e-009
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 674 VNESDLDKLPFLKCVIKET 730
V + DL LP+LK VIKET
Sbjct: 349 VTQDDLHGLPYLKAVIKET 405
Score = 24.0 bits (46), Expect(3) = 7e-009
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 779 DCVVGGYSVPRG 814
+C++ GY++P G
Sbjct: 457 ECIINGYTIPSG 492
>gb|BE421278.1|BE421278 HWM007.F07 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F07, mRNA sequence
Length = 812
Score = 58.3 bits (121), Expect(2) = 8e-009
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -3 / -1
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDP+VLERPPPRW
Sbjct: 116 LVPNSCSPGDPIVLERPPPRW 54
Score = 50.6 bits (104), Expect = 2e-005
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N WI RAAGIRHE
Sbjct: 54 PPRWRPL*NYWISRAAGIRHE 116
Score = 45.1 bits (92), Expect = 0.001
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -1 / -2
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAAR I *F*SGRHRGG
Sbjct: 115 SCRIPAAREIQ*F*SGRHRGG 53
Score = 39.1 bits (79), Expect = 0.057
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALEL+D PGCRN
Sbjct: 53 STAVAAALELLDLPGCRN 106
Score = 25.4 bits (49), Expect(2) = 8e-009
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 1150 GRRHGVEPRGARRG 1109
GRR G RGARRG
Sbjct: 196 GRRRGGRARGARRG 155
>gb|BE421037.1|BE421037 HWM005.B06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.B06, mRNA sequence
Length = 1191
Score = 59.3 bits (123), Expect(2) = 8e-009
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3 / -3
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDPLVLERPPPRW
Sbjct: 106 LVPNSCSPGDPLVLERPPPRW 44
Score = 56.5 bits (117), Expect = 3e-007
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3 / +2
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N*WIPRAAGIRHE
Sbjct: 44 PPRWRPL*N*WIPRAAGIRHE 106
Score = 52.4 bits (108), Expect = 6e-006
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGIH*F*SGRHRGG
Sbjct: 105 SCRIPAARGIH*F*SGRHRGG 43
Score = 45.1 bits (92), Expect = 0.001
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALELVDPPGCRN
Sbjct: 43 STAVAAALELVDPPGCRN 96
Score = 24.9 bits (48), Expect(2) = 8e-009
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2 / -2
Query: 1164 GQLSRGVGTA*SLVARGAVRPKTS 1093
G+LSRGVG ++ G RP+ S
Sbjct: 1091 GELSRGVGQKSAVA*GGRYRPRLS 1020
>gb|BE421783.1|BE421783 HWM014cE.02r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM014cE.02, mRNA sequence
Length = 708
Score = 58.3 bits (121), Expect(2) = 9e-009
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -3 / -2
Query: 65 LVPNSCSPGDPLVLERPPPRW 3
LVPNSCSPGDP+VLERPPPRW
Sbjct: 128 LVPNSCSPGDPIVLERPPPRW 66
Score = 54.2 bits (112), Expect = 2e-006
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 3 PPRWRPL*N*WIPRAAGIRHE 65
PPRWRPL*N WIPRAAGIRHE
Sbjct: 66 PPRWRPL*NYWIPRAAGIRHE 128
Score = 48.7 bits (100), Expect = 7e-005
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -1 / -3
Query: 64 SCRIPAARGIH*F*SGRHRGG 2
SCRIPAARGI *F*SGRHRGG
Sbjct: 127 SCRIPAARGIQ*F*SGRHRGG 65
Score = 43.7 bits (89), Expect = 0.002
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 2 STAVAAALELVDPPGCRN 55
STAVAAALEL+DPPGCRN
Sbjct: 65 STAVAAALELLDPPGCRN 118
Score = 24.9 bits (48), Expect(2) = 9e-009
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1 / -2
Query: 1111 GEAEDVAHVQLRGLHAVGQRPVEA 1040
GE DVA V+ G+H VG EA
Sbjct: 269 GEHHDVALVERLGVHGVGGGADEA 198
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 425,097,782
Number of Sequences: 312970
Number of extensions: 6139290
Number of successful extensions: 100689
Number of sequences better than 10.0: 3587
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16674516831
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)