TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580138.2.1
(1484 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ464513.1|BJ464513 BJ464513 K. Sato unpublished cDNA li... 404 e-112
gb|BI779147.2|BI779147 EBro01_SQ003_C08_R root, 3 week, hyd... 352 1e-097
gb|BF631021.3|BF631021 HVSMEb0014L21f Hordeum vulgare seedl... 346 3e-096
gb|BF626468.2|BF626468 HVSMEa0018H20f Hordeum vulgare seedl... 319 8e-094
gb|BQ763590.1|BQ763590 EBro02_SQ008_J19_R root, 3 week, hyd... 189 2e-070
gb|BE215249.2|BE215249 HV_CEb0006E12f Hordeum vulgare seedl... 244 5e-069
gb|BQ762590.1|BQ762590 EBro02_SQ004_K10 _R root, 3 week, hy... 243 2e-065
gb|BJ466873.1|BJ466873 BJ466873 K. Sato unpublished cDNA li... 189 4e-064
gb|BF265461.2|BF265461 HV_CEa0012F11f Hordeum vulgare seedl... 244 7e-064
gb|BE519492.1|BE519492 HV_CEb0016J10f Hordeum vulgare seedl... 229 3e-061
gb|BE215036.3|BE215036 HV_CEb0005J16f Hordeum vulgare seedl... 190 2e-050
gb|BF253631.2|BF253631 HVSMEf0001K23f Hordeum vulgare seedl... 186 4e-050
gb|BF253621.2|BF253621 HVSMEf0001K13f Hordeum vulgare seedl... 195 4e-049
gb|BI777959.2|BI777959 EBro07_SQ001_I08_R root, 3 week, red... 189 1e-048
gb|BG366182.1|BG366182 HVSMEi0006C09f Hordeum vulgare 20 DA... 194 1e-048
gb|BJ448607.1|BJ448607 BJ448607 K. Sato unpublished cDNA li... 189 3e-047
gb|BJ456327.1|BJ456327 BJ456327 K. Sato unpublished cDNA li... 188 7e-047
gb|BF624259.2|BF624259 HVSMEa0013C19f Hordeum vulgare seedl... 160 1e-038
gb|BJ452154.1|BJ452154 BJ452154 K. Sato unpublished cDNA li... 97 5e-035
>gb|BJ464513.1|BJ464513 BJ464513 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34l06 5', mRNA sequence
Length = 553
Score = 404 bits (876), Expect = e-112
Identities = 169/179 (94%), Positives = 174/179 (97%)
Frame = -1 / +1
Query: 1220 VAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSVAGVLLCGQLKLIEHDGLNLRTM 1041
VAAGYCLSASLLSIINKWAIMKFPYPGALTALQY TSVAGVLLCGQLKLIE D LNLRTM
Sbjct: 1 VAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLTSVAGVLLCGQLKLIEPDRLNLRTM 180
Query: 1040 WKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAVPIFVAIGETLYLHQPWPSLKTWLS 861
WKFLPAAVMFYISIFTNSELL+HA+VDTFIVFRSAVPIFVAIGETLYLHQP PS KTWLS
Sbjct: 181 WKFLPAAVMFYISIFTNSELLMHANVDTFIVFRSAVPIFVAIGETLYLHQPCPSFKTWLS 360
Query: 860 LSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSIDFVYIKHVVMTIGLNTWGLVLYNN 684
LSTILGGSVIYVFTDNQFT+TAY+WA+AYLASMSIDFVYIKHVVMTIGLNTWGLVLYNN
Sbjct: 361 LSTILGGSVIYVFTDNQFTLTAYSWAIAYLASMSIDFVYIKHVVMTIGLNTWGLVLYNN 537
Score = 298 bits (645), Expect = 5e-080
Identities = 113/181 (62%), Positives = 137/181 (75%)
Frame = -3 / +3
Query: 1218 GCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH*CCWSSPMWTAQAH*ARWT*LEDNV 1039
GCW+L +S++ALD+QQMGNHE+S+ WS DS V H*CCWSSP+WTA+A+*A T E++V
Sbjct: 3 GCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH*CCWSSPLWTAKAY*A**TEFENHV 182
Query: 1038 EVLTCCCDVLHLHLHK**TPASCRCGYFHCVPLCCAYICRDRRDAVSSSAMAIAQDMAFT 859
EVL CCC VLHL+LHK P +C+CG+FH V +CCA IC D + S M I QDMA T
Sbjct: 183 EVLACCCYVLHLNLHKQRAPDACQCGHFHRVSVCCADICGHWGDTLPSPTMPIFQDMALT 362
Query: 858 LHNTWWKCDLCFHRQPIHCDCLHLGSGLPSKHVH*FRVHQACCNDHWAEHMGPCAIQQP* 679
H TWWKCD+CFH P+H DCL LG L +HV+*FRVHQ C +DH EHMGPCA+QQP*
Sbjct: 363 FHYTWWKCDICFHG*PVHPDCLQLGDSLSGEHVY*FRVHQTCRHDHRVEHMGPCALQQP* 542
Query: 678 G 676
G
Sbjct: 543 G 545
Score = 293 bits (635), Expect = 1e-078
Identities = 134/182 (73%), Positives = 146/182 (80%)
Frame = +1 / -3
Query: 673 KASRLLYSTRPHVFSPMVITTCLMYTKSMDMLARXXXXXXXXXXXNWLSVKT*ITLPPSI 852
+ASRLL STRPHVF+PMV+TTCLMYTKS+DMLAR NWLSVKT ITLPPSI
Sbjct: 548 RASRLL*STRPHVFNPMVMTTCLMYTKSIDMLAR*AIAQL*AVRVNWLSVKTYITLPPSI 369
Query: 853 VESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSSLFVKMEM*NITAAGK 1032
VESESHVL DGHG *R SVSP+ATNIGTA+RNTMKVST A RSSLFVK+EM*NITAAGK
Sbjct: 368 VESESHVLKDGHGW*R*SVSPMATNIGTADRNTMKVSTLACIRSSLFVKIEM*NITAAGK 189
Query: 1033 NFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIAHLLMIESSDADKQYP 1212
NFH+VLK RRTPATLV+YC+AV APG GNFMIAHLL+IES DAD+Q P
Sbjct: 188 NFHMVLKFSLSGSISFSCPQRRTPATLVRYCKAVSAPG*GNFMIAHLLIIESRDADRQ*P 9
Query: 1213 AA 1218
AA
Sbjct: 8 AA 3
Score = 222 bits (479), Expect = 4e-057
Identities = 110/184 (59%), Positives = 124/184 (67%)
Frame = +2 / -1
Query: 668 ASKPQGCCIAQGPMCSAQWSLQHA*CTRNQWTCLLGRPLPRCKQSQ*IGCL*KHRSHFHQ 847
A++PQGCC AQGPMCS +WS +H *CTRNQ TC R P CKQS * G *KH SHFHQ
Sbjct: 553 AAEPQGCCRAQGPMCSTRWS*RHV*CTRNQ*TCSPDRLSPSCKQSG*TGYP*KHISHFHQ 374
Query: 848 VLWRVKXXXXXXXXXDEDTASLRSRQI*AQQSGTQ*KYPHRHEAGVHYL*RWRCRTSQQQ 1027
V W+V+ E S + QI AQQ+ T+*K PH H +G L*R RCRT QQQ
Sbjct: 373 V*WKVRAMS*KMGMVGEGKVSPQWPQISAQQTETR*KCPHWHASGARCL*RLRCRT*QQQ 194
Query: 1028 VRTSTLSSS*VHRAQ*A*AVHIGELQQH**NTAELSGLQDMEIS*LPIC**SRAATLINN 1207
RTST S+ V++AQ*A AVH GELQQH** T +LS LQ E S*LPIC**SRA L N
Sbjct: 193 ARTSTWFSNSVYQAQ*ALAVHKGELQQH**GTVKLSVLQGRETS*LPIC**SRAEMLTGN 14
Query: 1208 TQQP 1219
QQP
Sbjct: 13 NQQP 2
Score = 214 bits (462), Expect(2) = 5e-065
Identities = 87/131 (66%), Positives = 105/131 (80%)
Frame = +3 / -2
Query: 672 QSLKVVV*HKAPCVQPNGHYNMLDVHEINGHAC*VGHCPGVSSHSELVVCENIDHTSTKY 851
QSLKVVV HKAPCVQP+GH +M DVHEIN HA +G+ P VSS ELV+ ENI HTSTKY
Sbjct: 549 QSLKVVVEHKAPCVQPDGHDDMFDVHEINRHARQIGYRPAVSSQGELVIRENIYHTSTKY 370
Query: 852 CGE*KPCLERWPWLMKIQRLSDRDKYRHSRAEHNESIHIGMKQEFTICEDGDVEHHSSR* 1031
G+*+PCLERW WL+K++ L + KYRHSR +H+ES+HIGM QE +CED DVEH+SSR
Sbjct: 369 SGK*EPCLERWAWLVKVKCLPNGHKYRHSRPKHDESVHIGMHQELAVCED*DVEHNSSRQ 190
Query: 1032 ELPHCPQVKSI 1064
ELPH Q++SI
Sbjct: 189 ELPHGSQIQSI 157
Score = 89.5 bits (189), Expect(3) = 7e-038
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = -2 / +2
Query: 856 PQYLVEV*SMFSQTTNSL*LLTPGQWPT*QACPLISCTSSML**PLG*THGALCYTTTLR 677
P YLVEV* MFS+ T+S *LLT G+ P +AC LISCTS+M *P G*THGALC TTTLR
Sbjct: 365 PLYLVEV*YMFSRITSSP*LLTAGR*PIWRACLLISCTSNMSS*PSG*THGALCSTTTLR 544
Query: 676 L*C 668
L C
Sbjct: 545 LCC 553
Score = 63.4 bits (132), Expect(3) = 7e-038
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -2 / +2
Query: 1219 WLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISLVLLEFSYV 1088
WLL I Q CSR STNGQS*+F LE *QL S SLVLLEFS+V
Sbjct: 2 WLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSLVLLEFSFV 133
Score = 54.7 bits (113), Expect(2) = 5e-065
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3 / -2
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSH 1220
+L SCQ SR+ K HDCPFVD+REQR * I SSH
Sbjct: 102 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSH 1
Score = 43.7 bits (89), Expect(3) = 7e-038
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S MPMW
Sbjct: 179 CGSSCLLLLCSTSQSSQTASS*CMPMW 259
>gb|BI779147.2|BI779147 EBro01_SQ003_C08_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_C08 5', mRNA sequence
Length = 664
Score = 352 bits (763), Expect(2) = 1e-097
Identities = 147/164 (89%), Positives = 155/164 (94%)
Frame = -1 / +1
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 172 GSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 351
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAV 933
SVAGVLLCGQLKLIE D LNLRTMWKFLPAAVMFYISIFTNSELL+HA+VDTFIVFRSAV
Sbjct: 352 SVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMFYISIFTNSELLMHANVDTFIVFRSAV 531
Query: 932 PIFVAIGETLYLHQPWPSLKTWLSLSTILGGSVIYVFTDNQFTV 801
PIFVAIGETLYLHQP PS KTWLSLSTILGGSVIYVFTDNQFT+
Sbjct: 532 PIFVAIGETLYLHQPCPSFKTWLSLSTILGGSVIYVFTDNQFTL 663
Score = 270 bits (585), Expect = 1e-071
Identities = 102/163 (62%), Positives = 123/163 (75%)
Frame = -3 / +3
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 171 RVSRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 350
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFHCVPLCC 934
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+CG+FH V +CC
Sbjct: 351 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQCGHFHRVSVCC 530
Query: 933 AYICRDRRDAVSSSAMAIAQDMAFTLHNTWWKCDLCFHRQPIH 805
A IC D + S M I QDMA T H TWWKCD+CFH P+H
Sbjct: 531 ADICGHWGDTLPSPTMPIFQDMALTXHYTWWKCDICFHG*PVH 659
Score = 251 bits (543), Expect = 6e-066
Identities = 116/155 (74%), Positives = 126/155 (81%)
Frame = +1 / -3
Query: 808 NWLSVKT*ITLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSS 987
NWLSVKT ITLPPSIV SESHVL DGHG *R SVSP+ATNIGTA+RNTMKVST A RSS
Sbjct: 656 NWLSVKTYITLPPSIVXSESHVLKDGHGW*R*SVSPMATNIGTADRNTMKVSTLACIRSS 477
Query: 988 LFVKMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIA 1167
LFVK+EM*NITAAGKNFH+VLK RRTPATLV+YC+AV APG GNFMIA
Sbjct: 476 LFVKIEM*NITAAGKNFHMVLKFSLSGSISFSCPQRRTPATLVRYCKAVSAPG*GNFMIA 297
Query: 1168 HLLMIESSDADKQYPAATP*IEACCIRVFNMLLQA 1272
HLL+IES DAD+Q PAATP* EA IRVF++L QA
Sbjct: 296 HLLIIESRDADRQ*PAATP*TEAWRIRVFHVLFQA 192
Score = 186 bits (401), Expect = 2e-046
Identities = 97/162 (59%), Positives = 108/162 (66%)
Frame = +2 / -1
Query: 800 SQ*IGCL*KHRSHFHQVLWRVKXXXXXXXXXDEDTASLRSRQI*AQQSGTQ*KYPHRHEA 979
S * G *KH SHFHQV W V+ E S + QI AQQ+ T+*K PH H +
Sbjct: 664 SG*TGYP*KHISHFHQV*WXVRAMS*KMGMVGEGKVSPQWPQISAQQTETR*KCPHWHAS 485
Query: 980 GVHYL*RWRCRTSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH**NTAELSGLQDMEIS 1159
G L*R RCRT QQQ RTST S+ V++AQ*A AVH GELQQH** T +LS LQ E S
Sbjct: 484 GARCL*RLRCRT*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH**GTVKLSVLQGRETS 305
Query: 1160 *LPIC**SRAATLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
*LPIC**SRA L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 304 *LPIC**SRAEMLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 179
Score = 142 bits (304), Expect(2) = 1e-048
Identities = 56/86 (65%), Positives = 69/86 (80%)
Frame = +3 / -2
Query: 807 ELVVCENIDHTSTKYCGE*KPCLERWPWLMKIQRLSDRDKYRHSRAEHNESIHIGMKQEF 986
ELV+ ENI HTSTKY G *+PCLERW WL+K++ L + KYRHSR +H+ES+HIGM QE
Sbjct: 657 ELVIRENIYHTSTKYSGX*EPCLERWAWLVKVKCLPNGHKYRHSRPKHDESVHIGMHQEL 478
Query: 987 TICEDGDVEHHSSR*ELPHCPQVKSI 1064
+CED DVEH+SSR ELPH Q++SI
Sbjct: 477 AVCED*DVEHNSSRQELPHGSQIQSI 400
Score = 87.2 bits (184), Expect(4) = 9e-029
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = -2 / +2
Query: 1282 RELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISLVLL 1103
R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SLVLL
Sbjct: 182 RKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSLVLL 361
Query: 1102 EFSYV 1088
EFS+V
Sbjct: 362 EFSFV 376
Score = 72.5 bits (152), Expect(2) = 1e-048
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -2
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 345 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 196
Score = 43.7 bits (89), Expect(4) = 9e-029
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S MPMW
Sbjct: 422 CGSSCLLLLCSTSQSSQTASS*CMPMW 502
Score = 27.2 bits (53), Expect(4) = 9e-029
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 856 PQYLVEV*SMFSQTTNS 806
P YLVEV* MFS+ T+S
Sbjct: 608 PLYLVEV*YMFSRITSS 658
Score = 25.8 bits (50), Expect(2) = 1e-097
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 1354 ASERCLISHTPQRK 1313
A RCLIS +PQ+K
Sbjct: 128 AGSRCLISESPQKK 169
Score = 24.9 bits (48), Expect(4) = 9e-029
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1 / +1
Query: 1346 KMSNLSHTSKEDTSPEGSGTTERT 1275
+MSNL SKED S E +G T
Sbjct: 136 QMSNL*EPSKEDGSVEKTGAWNNT 207
>gb|BF631021.3|BF631021 HVSMEb0014L21f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0014L21f, mRNA sequence
Length = 804
Score = 346 bits (750), Expect(2) = 3e-096
Identities = 146/179 (81%), Positives = 159/179 (88%)
Frame = -1 / +1
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 229 GSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 408
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAV 933
SVAGVLLCGQLKLIE D LNLRTMWKFLPAAVMFYISIFTNSELL+HA+VDTFIV R+AV
Sbjct: 409 SVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMFYISIFTNSELLMHANVDTFIV*RTAV 588
Query: 932 PIFVAIGETLYLHQPWPSLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSI 756
PIFVAIGETLYLHQP P KTWLSL TILGGSVIY TD+Q T+TAY W ++ ASM +
Sbjct: 589 PIFVAIGETLYLHQPCPCFKTWLSLCTILGGSVIYDKTDDQDTLTAYKWTMSLSASMCV 765
Score = 264 bits (571), Expect = 9e-070
Identities = 104/178 (58%), Positives = 128/178 (71%)
Frame = -3 / +3
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R+ RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 228 RFSRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 407
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFHCVPLCC 934
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+CG+FH V CC
Sbjct: 408 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQCGHFHRVTDCC 587
Query: 933 AYICRDRRDAVSSSAMAIAQDMAFTLHNTWWKCDLCFHRQPIHCDCLHLGSGLPSKHV 760
A IC D V S M + QDMA T+H TWWKCD+ P H DCL + + +HV
Sbjct: 588 ADICGHWGDTVPSPTMPMFQDMALTMHYTWWKCDI**DG*PRHPDCLQVDNEPVCEHV 761
Score = 239 bits (517), Expect(2) = 5e-064
Identities = 111/155 (71%), Positives = 123/155 (79%)
Frame = +1 / -2
Query: 808 NWLSVKT*ITLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSS 987
+W SV + ITLPPSIV SESHVL GHG *RYSVSP+ATNIGTA R+TMKVST A RSS
Sbjct: 713 SWSSVLSYITLPPSIVHSESHVLKHGHGW*RYSVSPMATNIGTAVRHTMKVSTLACIRSS 534
Query: 988 LFVKMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIA 1167
LFVK+EM*NITAAGKNFH+VLK RRTPATLV+YC+AV APG GNFMIA
Sbjct: 533 LFVKIEM*NITAAGKNFHMVLKFSLSGSISFSCPQRRTPATLVRYCKAVSAPG*GNFMIA 354
Query: 1168 HLLMIESSDADKQYPAATP*IEACCIRVFNMLLQA 1272
HLL+IES DAD+Q PAATP* EA IRVF++L QA
Sbjct: 353 HLLIIESRDADRQ*PAATP*TEAWRIRVFHVLFQA 249
Score = 192 bits (414), Expect = 4e-048
Identities = 103/178 (57%), Positives = 114/178 (64%)
Frame = +2 / -3
Query: 752 NQWTCLLGRPLPRCKQSQ*IGCL*KHRSHFHQVLWRVKXXXXXXXXXDEDTASLRSRQI* 931
NQ TC L CKQS +G H SHFHQV V+ E T S + QI
Sbjct: 769 NQHTCSQTGSLSTCKQSGCLGHPSYHISHFHQV*CIVRAMS*NMGMVGEGTVSPQWPQIS 590
Query: 932 AQQSGTQ*KYPHRHEAGVHYL*RWRCRTSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH 1111
AQQS T+*K PH H +G L*R RCRT QQQ RTST S+ V++AQ*A AVH GELQQH
Sbjct: 589 AQQSVTR*KCPHWHASGARCL*RLRCRT*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH 410
Query: 1112 **NTAELSGLQDMEIS*LPIC**SRAATLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
** T +LS LQ E S*LPIC**SRA L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 409 **GTVKLSVLQGRETS*LPIC**SRAEMLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 236
Score = 140 bits (301), Expect(2) = 3e-048
Identities = 60/103 (58%), Positives = 71/103 (68%)
Frame = +3 / -1
Query: 756 NGHAC*VGHCPGVSSHSELVVCENIDHTSTKYCGE*KPCLERWPWLMKIQRLSDRDKYRH 935
N HA HCP VSS LV+ I HTSTKY *+PCLE W WL+K+Q L + KYRH
Sbjct: 765 NTHARRQAHCPLVSSQGVLVIRLIIYHTSTKYSA**EPCLETWAWLVKVQCLPNGHKYRH 586
Query: 936 SRAEHNESIHIGMKQEFTICEDGDVEHHSSR*ELPHCPQVKSI 1064
S H+ES+HIGM QE +CED DVEH+SSR ELPH Q++SI
Sbjct: 585 SSPSHDESVHIGMHQELAVCED*DVEHNSSRQELPHGSQIQSI 457
Score = 87.7 bits (185), Expect(3) = 8e-029
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2 / +2
Query: 1291 VLPRELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISL 1112
V R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SL
Sbjct: 230 VQSRKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSL 409
Query: 1111 VLLEFSYV 1088
VLLEFS+V
Sbjct: 410 VLLEFSFV 433
Score = 72.5 bits (152), Expect(2) = 3e-048
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -1
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 402 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 253
Score = 43.7 bits (89), Expect(3) = 8e-029
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S MPMW
Sbjct: 479 CGSSCLLLLCSTSQSSQTASS*CMPMW 559
Score = 34.5 bits (69), Expect(3) = 8e-029
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -2 / +2
Query: 910 RRCIFIXXXXXXXXXXXSPQYLVEV*SMFSQTTNSL*LLTPGQWPT*QACPLI 752
R C F YLVEV* M + T + *LLT GQ +AC L+
Sbjct: 611 RHCTFTNHAHVSRHGSHYALYLVEV*YMIRRMTKTP*LLTSGQ*ACLRACVLV 769
Score = 27.2 bits (53), Expect(2) = 3e-096
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 1354 ASERCLISHTPQRKILHLR 1298
A RCLIS +PQ+K + R
Sbjct: 185 AGSRCLISQSPQKKTVQSR 241
Score = 26.3 bits (51), Expect(2) = 5e-064
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 1311 IFL*GV*EIRHLSDASSS 1364
+F *G+*EIRHL A+ S
Sbjct: 228 VFF*GL*EIRHLEPANPS 175
>gb|BF626468.2|BF626468 HVSMEa0018H20f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0018H20f, mRNA sequence
Length = 792
Score = 319 bits (691), Expect(4) = 8e-094
Identities = 134/157 (85%), Positives = 143/157 (91%)
Frame = -1 / +2
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 173 GSLEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 352
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAV 933
SVAGVLLCGQLKLIE D LNL+TMWKFLPAAVMFYISIFTNSELL+HA+VDTFIVFRSAV
Sbjct: 353 SVAGVLLCGQLKLIEPDRLNLKTMWKFLPAAVMFYISIFTNSELLMHANVDTFIVFRSAV 532
Query: 932 PIFVAIGETLYLHQPWPSLKTWLSLSTILGGSVIYVF 822
PIFVAIGETLYLHQP PS KTW+ LSTILGG V F
Sbjct: 533 PIFVAIGETLYLHQPCPSFKTWVLLSTILGGRVNICF 643
Score = 249 bits (538), Expect(3) = 2e-067
Identities = 96/159 (60%), Positives = 117/159 (73%)
Frame = -3 / +1
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R+ RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 172 RFTRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 351
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFHCVPLCC 934
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+CG+FH V +CC
Sbjct: 352 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQCGHFHRVSVCC 531
Query: 933 AYICRDRRDAVSSSAMAIAQDMAFTLHNTWWKCDLCFHR 817
A IC + V S M I QDM T H TWWK + F R
Sbjct: 532 ADICGHWGNTVPSPTMPIFQDMGLTFHYTWWKGEYMFPR 648
Score = 236 bits (510), Expect(3) = 2e-065
Identities = 107/146 (73%), Positives = 119/146 (81%)
Frame = +1 / -1
Query: 835 TLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSSLFVKMEM*N 1014
TLPPSIVES++HVL DGHG *RYSVSP+ATNIGTA+RNTMKVST A RSSLFVK+EM*N
Sbjct: 630 TLPPSIVESKTHVLKDGHGW*RYSVSPMATNIGTADRNTMKVSTLACIRSSLFVKIEM*N 451
Query: 1015 ITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIAHLLMIESSD 1194
ITAAGKNFH+V K RRTPATLV+YC+AV APG GNFMIAHLL+IES D
Sbjct: 450 ITAAGKNFHMVFKFSLSGSISFSCPQRRTPATLVRYCKAVSAPG*GNFMIAHLLIIESRD 271
Query: 1195 ADKQYPAATP*IEACCIRVFNMLLQA 1272
AD+Q PAATP* EA IRVF++L QA
Sbjct: 270 ADRQ*PAATP*TEAWRIRVFHVLFQA 193
Score = 176 bits (378), Expect = 4e-043
Identities = 90/151 (59%), Positives = 102/151 (67%)
Frame = +2 / -2
Query: 833 SHFHQVLWRVKXXXXXXXXXDEDTASLRSRQI*AQQSGTQ*KYPHRHEAGVHYL*RWRCR 1012
S FHQV W+V+ E T + QI AQQ+ T+*K PH H +G L*R RCR
Sbjct: 632 SPFHQV*WKVRPMS*KMGMVGEGTVFPQWPQISAQQTETR*KCPHWHASGARCL*RLRCR 453
Query: 1013 TSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH**NTAELSGLQDMEIS*LPIC**SRAA 1192
T QQQ RTST S+ V++AQ*A AVH GELQQH** T +LS LQ E S*LPIC**SRA
Sbjct: 452 T*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH**GTVKLSVLQGRETS*LPIC**SRAE 273
Query: 1193 TLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 272 MLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 180
Score = 127 bits (271), Expect(2) = 4e-044
Identities = 50/81 (61%), Positives = 61/81 (75%)
Frame = +3 / -3
Query: 822 ENIDHTSTKYCGE*KPCLERWPWLMKIQRLSDRDKYRHSRAEHNESIHIGMKQEFTICED 1001
E H STKY G+* PCLERW WL+K+Q + KYRHSR +H+ES+HIGM QE +CED
Sbjct: 643 ETYIHPSTKYSGK*DPCLERWAWLVKVQCFPNGHKYRHSRPKHDESVHIGMHQELAVCED 464
Query: 1002 GDVEHHSSR*ELPHCPQVKSI 1064
DVEH+SSR ELPH Q++SI
Sbjct: 463 *DVEHNSSRQELPHGFQIQSI 401
Score = 87.2 bits (184), Expect(3) = 8e-027
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = -2 / +3
Query: 1282 RELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISLVLL 1103
R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SLVLL
Sbjct: 183 RKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSLVLL 362
Query: 1102 EFSYV 1088
EFS+V
Sbjct: 363 EFSFV 377
Score = 72.5 bits (152), Expect(2) = 4e-044
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -3
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 346 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 197
Score = 43.7 bits (89), Expect(3) = 8e-027
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / +3
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S MPMW
Sbjct: 423 CGSSCLLLLCSTSQSSQTASS*CMPMW 503
Score = 34.5 bits (69), Expect(4) = 8e-094
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 1354 ASERCLISHTPQRKILHLR 1298
A RCLISH+PQ+K +H R
Sbjct: 129 AGSRCLISHSPQKKTVHSR 185
Score = 28.1 bits (55), Expect(3) = 8e-027
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1 / +2
Query: 1346 KMSNLSHTSKEDTSPEGSGTTERT 1275
+MSNLS SKED S E +G T
Sbjct: 137 QMSNLSQPSKEDGSLEKTGAWNNT 208
Score = 26.3 bits (51), Expect(4) = 8e-094
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1 / +2
Query: 758 IDFVYIKHVVMTIGLNTWG 702
I F IKHVVMTIG G
Sbjct: 710 IGFRDIKHVVMTIGFEHMG 766
Score = 26.3 bits (51), Expect(3) = 2e-065
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 1311 IFL*GV*EIRHLSDASSS 1364
+F *G+*EIRHL A+ S
Sbjct: 172 VFF*GL*EIRHLEPANPS 119
Score = 26.3 bits (51), Expect(3) = 2e-065
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 703 PHVFSPMVITTCLMYTKSMDM 765
P +PMV+TTCLM K + +
Sbjct: 765 PMCSNPMVMTTCLMSRKPIGL 703
Score = 24.0 bits (46), Expect(3) = 2e-067
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3 / +1
Query: 753 FRVHQACCNDHW 718
F HQ C +DHW
Sbjct: 715 FPGHQTCRHDHW 750
Score = 23.1 bits (44), Expect(4) = 8e-094
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 840 KCDLCFHRQPIHCDCL 793
+ ++CFH P+H D L
Sbjct: 626 RVNICFHG*PVHPDWL 673
Score = 22.6 bits (43), Expect(3) = 2e-067
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 1344 DV*SLTHLKGRYFT 1303
DV*SLT LK R FT
Sbjct: 139 DV*SLTALKRRRFT 180
>gb|BQ763590.1|BQ763590 EBro02_SQ008_J19_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_J19 5', mRNA sequence
Length = 672
Score = 189 bits (407), Expect(2) = 2e-070
Identities = 76/89 (85%), Positives = 84/89 (94%)
Frame = +1 / -3
Query: 334 LGAFGFVVDCW*STPPDMHIKSPMVPTKEACLSQISKLITTVRSLLTMPSTVNPVAEIAR 513
LG GFVVDCW* TPPDMHIKSP+VPT++ACLSQIS+LITTVRSL T+PSTVNPVAE+AR
Sbjct: 427 LGTLGFVVDCW*RTPPDMHIKSPIVPTRDACLSQISRLITTVRSLFTIPSTVNPVAEMAR 248
Query: 514 LQENPKKDIDNPNRHERATGRTTSNESQF 600
LQENPKKDIDNPNRH+RATGRTTS +SQF
Sbjct: 247 LQENPKKDIDNPNRHDRATGRTTS*DSQF 161
Score = 162 bits (348), Expect(2) = 3e-059
Identities = 78/118 (66%), Positives = 83/118 (70%)
Frame = -1 / +3
Query: 614 SSKVSNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLI 435
S +NWLS+DVVLPVA CRRAISATGFTVLGIVNKLLTVVINLLI
Sbjct: 147 SKMTTNWLSYDVVLPVALSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLLI 326
Query: 434 WDKHASFVGTIGLLICMSGGVLYQQSTTXXXXXXXXXXXENDEEQQKLLQMQGVQESS 261
WDKHAS VGTIGLLICMSGGVLYQQSTT E+DEE Q LLQ+Q ES+
Sbjct: 327 WDKHASLVGTIGLLICMSGGVLYQQSTTKPKVPKIEPKEEDDEEGQNLLQIQPGHESN 500
Score = 122 bits (260), Expect(2) = 3e-047
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = -3 / +2
Query: 600 KLAFI*CGPPCCSLMPVWIINILLRILLQTSYFCYWVHSAWHS*QAPNCCD*FAYLGQAC 421
KLA +* GP CCS+MPV +I ILLRILLQT + C+W++ A +S QAP+ D AYLGQAC
Sbjct: 161 KLAIL*RGPSCCSVMPVRVIYILLRILLQTGHLCHWIYGARYSEQAPDRRDQSAYLGQAC 340
Query: 420 LFCGYHWALDMHVRWCALPAIHH 352
+ G +WALDMHV W +LPAI H
Sbjct: 341 IPGGDNWALDMHVWWRSLPAIDH 409
Score = 104 bits (221), Expect(3) = 2e-035
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +2 / -1
Query: 563 EQQGGPHQMKASLTLWSCRPSSDQILPLREARVGIASKPQGCCIAQGPMCSAQWSLQHA* 742
+Q+G H++ + L+ WSCRPSSD LPL A+VG A++PQGCC AQGPMCS +WS +H *
Sbjct: 195 QQEGPRHKIASLLSSWSCRPSSD*TLPL*GAQVGTAAEPQGCCRAQGPMCSTRWS*RHV* 16
Query: 743 CTRNQ 757
CTRNQ
Sbjct: 15 CTRNQ 1
Score = 97.7 bits (207), Expect(2) = 7e-042
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +1 / -3
Query: 607 LELSTFI*SNSPITRSSSGNSIKASRLLYSTRPHVFSPMVITTCLMYTKS 756
LELSTFI* NSPI RSSSGNS +ASRLL STRPHVF+PMV+TTCLMYTKS
Sbjct: 151 LELSTFI*LNSPIIRSSSGNSSRASRLL*STRPHVFNPMVMTTCLMYTKS 2
Score = 97.7 bits (207), Expect(2) = 2e-070
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +3 / -2
Query: 603 HFGAVDLHLIKFSHYEKLEWE*HQSLKVVV*HKAPCVQPNGHYNMLDVHEI 755
H GAVDLHLI+ SHY++L+WE QSLKVVV HKAPCVQP+GH +M DVHEI
Sbjct: 155 HLGAVDLHLIELSHYKELKWEQQQSLKVVVEHKAPCVQPDGHDDMFDVHEI 3
Score = 94.1 bits (199), Expect(2) = 7e-042
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +2 / -1
Query: 329 QPWAPSVSWWIAGRAHHLTCISRAQWYPQKRHACPR*AN*SQQLGAC*LCQAL*TQ*QK* 508
Q W P W IAGR H TCISRAQ P HACPR*A+*S++ GAC L +A * Q Q+
Sbjct: 432 QSWVPWALWSIAGRERHQTCISRAQLSPPGMHACPR*AD*SRRSGACSLYRAP*IQWQRW 253
Query: 509 LVCXXXXXXXXXXQTGMREQQGGPHQMKASL 601
VC +TGM EQQ GP ASL
Sbjct: 252 PVCRRIRRRI*ITRTGMTEQQEGPRHKIASL 160
Score = 87.7 bits (185), Expect(2) = 3e-047
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = -1 / +3
Query: 755 DFVYIKHVVMTIGLNTWGLVLYNNXXXXXXXXXXXLVMGEFDQMKVDSSKVS 600
DFVYIKHVVMTIGLNTWGLVLYNN L+MGEF+QMKVDSSK++
Sbjct: 3 DFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGEFNQMKVDSSKMT 158
Score = 87.7 bits (185), Expect(2) = 3e-059
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = -3 / +2
Query: 756 *FRVHQACCNDHWAEHMGPCAIQQP*GFDAIPTRASRNGRI*SDEGRQLQ 607
*FRVHQ C +DH EHMGPCA+QQP*G A+PT A NGR+ SDEGRQLQ
Sbjct: 2 *FRVHQTCRHDHRVEHMGPCALQQP*GSAAVPT*APYNGRVQSDEGRQLQ 151
Score = 60.2 bits (125), Expect(3) = 2e-035
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3 / -2
Query: 369 EHTT*HAYQEPNGTHKRGMLVPDKQINHNS*ELVNYAKH 485
E+ T HAYQEPN H+ MLVPDKQI+H+ ELV+Y +H
Sbjct: 392 ENATRHAYQEPNCPHQGCMLVPDKQIDHDGQELVHYTEH 276
Score = 24.0 bits (46), Expect(3) = 2e-035
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 549 KQA*ESNREDHI 584
+QA*+SNR+DH+
Sbjct: 212 EQA*QSNRKDHV 177
>gb|BE215249.2|BE215249 HV_CEb0006E12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006E12f, mRNA sequence
Length = 906
Score = 244 bits (528), Expect(3) = 5e-069
Identities = 103/127 (81%), Positives = 113/127 (88%)
Frame = -1 / +1
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 187 GSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 366
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAV 933
SVAGVLLCGQLKLIE D LNLRTMWKFLPAAVMFYISIFTNSELL+ A+VDTFI ++A
Sbjct: 367 SVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMFYISIFTNSELLMRANVDTFIECQAAG 546
Query: 932 PIFVAIG 912
P A+G
Sbjct: 547 PYLWALG 567
Score = 204 bits (440), Expect = 1e-051
Identities = 77/119 (64%), Positives = 95/119 (79%)
Frame = -3 / +3
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R+ RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 186 RFSRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 365
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFHCVPLC 937
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+CG+FH V C
Sbjct: 366 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQCGHFHRVSGC 542
Score = 166 bits (356), Expect(2) = 5e-042
Identities = 79/120 (65%), Positives = 89/120 (74%)
Frame = +1 / -2
Query: 913 PIATNIGTAERNTMKVSTSA*SRSSLFVKMEM*NITAAGKNFHIVLKXXXXXXXXXXXXH 1092
P A G A ++MKVST A RSSLFVK+EM*NITAAGKNFH+VLK
Sbjct: 566 PNAHKYGPAA*HSMKVSTLARIRSSLFVKIEM*NITAAGKNFHMVLKFSLSGSISFSCPQ 387
Query: 1093 RRTPATLVKYCRAVRAPGYGNFMIAHLLMIESSDADKQYPAATP*IEACCIRVFNMLLQA 1272
RRTPATLV+YC+AV APG GNFMIAHLL+IES DAD+Q PAATP* EA IRVF++L QA
Sbjct: 386 RRTPATLVRYCKAVSAPG*GNFMIAHLLIIESRDADRQ*PAATP*TEAWRIRVFHVLFQA 207
Score = 159 bits (341), Expect = 5e-038
Identities = 78/117 (66%), Positives = 86/117 (73%)
Frame = +2 / -3
Query: 935 QQSGTQ*KYPHRHEAGVHYL*RWRCRTSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH* 1114
QQ T+*K PH H +G L*R RCRT QQQ RTST S+ V++AQ*A AVH GELQQH*
Sbjct: 544 QQPDTR*KCPHWHASGARCL*RLRCRT*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH* 365
Query: 1115 *NTAELSGLQDMEIS*LPIC**SRAATLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
* T +LS LQ E S*LPIC**SRA L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 364 *GTVKLSVLQGRETS*LPIC**SRAEMLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 194
Score = 87.7 bits (185), Expect(2) = 3e-023
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2 / +2
Query: 1291 VLPRELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISL 1112
V R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SL
Sbjct: 188 VQSRKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSL 367
Query: 1111 VLLEFSYV 1088
VLLEFS+V
Sbjct: 368 VLLEFSFV 391
Score = 72.5 bits (152), Expect(2) = 1e-024
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -1
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 360 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 211
Score = 61.6 bits (128), Expect(2) = 1e-024
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3 / -1
Query: 951 NESIHIGMKQEFTICEDGDVEHHSSR*ELPHCPQVKSI 1064
+ES+HIG QE +CED DVEH+SSR ELPH Q++SI
Sbjct: 528 DESVHIGTHQELAVCED*DVEHNSSRQELPHGSQIQSI 415
Score = 41.8 bits (85), Expect(2) = 3e-023
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -2 / +2
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S +PMW
Sbjct: 437 CGSSCLLLLCSTSQSSQTASS*CVPMW 517
Score = 29.5 bits (58), Expect(3) = 5e-069
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / +3
Query: 932 PIFVAIGETLYLHQPWPSLKTWLSLS 855
PIFV IGETLYL+ S L+LS
Sbjct: 546 PIFVGIGETLYLNTMPSSRLGLLALS 623
Score = 27.2 bits (53), Expect(3) = 5e-069
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +2
Query: 1354 ASERCLISHTPQRKILHLR 1298
A RCLIS +PQ+K + R
Sbjct: 143 AGSRCLISQSPQKKTVQSR 199
Score = 26.3 bits (51), Expect(2) = 5e-042
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 1311 IFL*GV*EIRHLSDASSS 1364
+F *G+*EIRHL A+ S
Sbjct: 186 VFF*GL*EIRHLEPANPS 133
>gb|BQ762590.1|BQ762590 EBro02_SQ004_K10 _R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_K10 5', mRNA sequence
Length = 649
Score = 243 bits (526), Expect(2) = 2e-065
Identities = 101/115 (87%), Positives = 108/115 (93%)
Frame = -1 / +2
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 305 GSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 484
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIV 948
SVAGVLLCGQLKLIE D LNLRTMWKFLPAAVMFYISIFTNSELL+HA+VDTFIV
Sbjct: 485 SVAGVLLCGQLKLIEPDRLNLRTMWKFLPAAVMFYISIFTNSELLMHANVDTFIV 649
Score = 202 bits (435), Expect = 5e-051
Identities = 75/114 (65%), Positives = 93/114 (81%)
Frame = -3 / +1
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R+ RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 304 RFSRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 483
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFH 952
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+CG+FH
Sbjct: 484 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQCGHFH 645
Score = 163 bits (350), Expect(2) = 4e-041
Identities = 76/108 (70%), Positives = 84/108 (77%)
Frame = +1 / -2
Query: 949 TMKVSTSA*SRSSLFVKMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCR 1128
TMKVST A RSSLFVK+EM*NITAAGKNFH+VLK RRTPATLV+YC+
Sbjct: 648 TMKVSTLACIRSSLFVKIEM*NITAAGKNFHMVLKFSLSGSISFSCPQRRTPATLVRYCK 469
Query: 1129 AVRAPGYGNFMIAHLLMIESSDADKQYPAATP*IEACCIRVFNMLLQA 1272
AV APG GNFMIAHLL+IES DAD+Q PAATP* EA IRVF++L QA
Sbjct: 468 AVSAPG*GNFMIAHLLIIESRDADRQ*PAATP*TEAWRIRVFHVLFQA 325
Score = 153 bits (328), Expect = 3e-036
Identities = 75/112 (66%), Positives = 83/112 (74%)
Frame = +2 / -3
Query: 950 Q*KYPHRHEAGVHYL*RWRCRTSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH**NTAE 1129
+*K PH H +G L*R RCRT QQQ RTST S+ V++AQ*A AVH GELQQH** T +
Sbjct: 647 R*KCPHWHASGARCL*RLRCRT*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH**GTVK 468
Query: 1130 LSGLQDMEIS*LPIC**SRAATLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
LS LQ E S*LPIC**SRA L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 467 LSVLQGRETS*LPIC**SRAEMLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 312
Score = 87.7 bits (185), Expect(2) = 8e-024
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2 / +3
Query: 1291 VLPRELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISL 1112
V R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SL
Sbjct: 306 VQSRKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSL 485
Query: 1111 VLLEFSYV 1088
VLLEFS+V
Sbjct: 486 VLLEFSFV 509
Score = 72.5 bits (152), Expect(2) = 1e-026
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -1
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 478 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 329
Score = 68.0 bits (142), Expect(2) = 1e-026
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +3 / -1
Query: 948 HNESIHIGMKQEFTICEDGDVEHHSSR*ELPHCPQVKSI 1064
H+ES+HIGM QE +CED DVEH+SSR ELPH Q++SI
Sbjct: 649 HDESVHIGMHQELAVCED*DVEHNSSRQELPHGSQIQSI 533
Score = 43.7 bits (89), Expect(2) = 8e-024
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -2 / +3
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPMW 962
CGSS LLL CSTS SSQ +S MPMW
Sbjct: 555 CGSSCLLLLCSTSQSSQTASS*CMPMW 635
Score = 27.2 bits (53), Expect(2) = 2e-065
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +3
Query: 1354 ASERCLISHTPQRKILHLR 1298
A RCLIS +PQ+K + R
Sbjct: 261 AGSRCLISQSPQKKTVQSR 317
Score = 26.3 bits (51), Expect(2) = 4e-041
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 1311 IFL*GV*EIRHLSDASSS 1364
+F *G+*EIRHL A+ S
Sbjct: 304 VFF*GL*EIRHLEPANPS 251
>gb|BJ466873.1|BJ466873 BJ466873 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34l06 3', mRNA sequence
Length = 758
Score = 189 bits (407), Expect(2) = 4e-064
Identities = 76/89 (85%), Positives = 84/89 (94%)
Frame = +1 / +3
Query: 334 LGAFGFVVDCW*STPPDMHIKSPMVPTKEACLSQISKLITTVRSLLTMPSTVNPVAEIAR 513
LG GFVVDCW* TPPDMHIKSP+VPT++ACLSQIS+LITTVRSL T+PSTVNPVAE+AR
Sbjct: 357 LGTLGFVVDCW*RTPPDMHIKSPIVPTRDACLSQISRLITTVRSLFTIPSTVNPVAEMAR 536
Query: 514 LQENPKKDIDNPNRHERATGRTTSNESQF 600
LQENPKKDIDNPNRH+RATGRTTS +SQF
Sbjct: 537 LQENPKKDIDNPNRHDRATGRTTS*DSQF 623
Score = 162 bits (348), Expect(2) = 8e-053
Identities = 78/118 (66%), Positives = 83/118 (70%)
Frame = -1 / -2
Query: 614 SSKVSNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLI 435
S +NWLS+DVVLPVA CRRAISATGFTVLGIVNKLLTVVINLLI
Sbjct: 637 SKMTTNWLSYDVVLPVALSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLLI 458
Query: 434 WDKHASFVGTIGLLICMSGGVLYQQSTTXXXXXXXXXXXENDEEQQKLLQMQGVQESS 261
WDKHAS VGTIGLLICMSGGVLYQQSTT E+DEE Q LLQ+Q ES+
Sbjct: 457 WDKHASLVGTIGLLICMSGGVLYQQSTTKPKVPKIEPKEEDDEEGQNLLQIQPGHESN 284
Score = 122 bits (260), Expect(2) = 1e-038
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = -3 / -1
Query: 600 KLAFI*CGPPCCSLMPVWIINILLRILLQTSYFCYWVHSAWHS*QAPNCCD*FAYLGQAC 421
KLA +* GP CCS+MPV +I ILLRILLQT + C+W++ A +S QAP+ D AYLGQAC
Sbjct: 623 KLAIL*RGPSCCSVMPVRVIYILLRILLQTGHLCHWIYGARYSEQAPDRRDQSAYLGQAC 444
Query: 420 LFCGYHWALDMHVRWCALPAIHH 352
+ G +WALDMHV W +LPAI H
Sbjct: 443 IPGGDNWALDMHVWWRSLPAIDH 375
Score = 94.1 bits (199), Expect(2) = 9e-034
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +2 / +1
Query: 329 QPWAPSVSWWIAGRAHHLTCISRAQWYPQKRHACPR*AN*SQQLGAC*LCQAL*TQ*QK* 508
Q W P W IAGR H TCISRAQ P HACPR*A+*S++ GAC L +A * Q Q+
Sbjct: 352 QSWVPWALWSIAGRERHQTCISRAQLSPPGMHACPR*AD*SRRSGACSLYRAP*IQWQRW 531
Query: 509 LVCXXXXXXXXXXQTGMREQQGGPHQMKASL 601
VC +TGM EQQ GP ASL
Sbjct: 532 PVCRRIRRRI*ITRTGMTEQQEGPRHKIASL 624
Score = 80.3 bits (169), Expect(3) = 2e-028
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +2 / +1
Query: 563 EQQGGPHQMKASLTLWSCRPSSDQILPLREARVGIASKPQGCCIAQGPMCS 715
+Q+G H++ + L+ WSCRPSSD LPL A+VG A++PQGCC AQGPMCS
Sbjct: 589 QQEGPRHKIASLLSSWSCRPSSD*TLPL*GAQVGTAAEPQGCCRAQGPMCS 741
Score = 77.1 bits (162), Expect(2) = 4e-064
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3 / +2
Query: 603 HFGAVDLHLIKFSHYEKLEWE*HQSLKVVV*HKAPCVQP 719
H GAVDLHLI+ SHY++L+WE QSLKVVV HKAPCVQP
Sbjct: 629 HLGAVDLHLIELSHYKELKWEQQQSLKVVVEHKAPCVQP 745
Score = 70.7 bits (148), Expect(2) = 9e-034
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1 / +3
Query: 607 LELSTFI*SNSPITRSSSGNSIKASRLLYSTRPHVFSP 720
LELSTFI* NSPI RSSSGNS +ASRLL STRPHVF+P
Sbjct: 633 LELSTFI*LNSPIIRSSSGNSSRASRLL*STRPHVFNP 746
Score = 66.1 bits (138), Expect(2) = 8e-053
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -3 / -1
Query: 714 EHMGPCAIQQP*GFDAIPTRASRNGRI*SDEGRQLQ 607
EHMGPCA+QQP*G A+PT A NGR+ SDEGRQLQ
Sbjct: 740 EHMGPCALQQP*GSAAVPT*APYNGRVQSDEGRQLQ 633
Score = 60.2 bits (125), Expect(3) = 2e-028
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3 / +2
Query: 369 EHTT*HAYQEPNGTHKRGMLVPDKQINHNS*ELVNYAKH 485
E+ T HAYQEPN H+ MLVPDKQI+H+ ELV+Y +H
Sbjct: 392 ENATRHAYQEPNCPHQGCMLVPDKQIDHDGQELVHYTEH 508
Score = 59.3 bits (123), Expect(2) = 1e-038
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -1 / -2
Query: 719 GLNTWGLVLYNNXXXXXXXXXXXLVMGEFDQMKVDSSKVS 600
GLNTWGLVLYNN L+MGEF+QMKVDSSK++
Sbjct: 745 GLNTWGLVLYNNLEALLLFPLELLIMGEFNQMKVDSSKMT 626
Score = 24.0 bits (46), Expect(3) = 2e-028
Identities = 8/12 (66%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 549 KQA*ESNREDHI 584
+QA*+SNR+DH+
Sbjct: 572 EQA*QSNRKDHV 607
>gb|BF265461.2|BF265461 HV_CEa0012F11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012F11f, mRNA sequence
Length = 800
Score = 244 bits (528), Expect = 7e-064
Identities = 103/183 (56%), Positives = 133/183 (72%)
Frame = -1 / +1
Query: 1241 QQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSVAGVLLCGQLKLIEHD 1062
Q + + GY L +SLL+IINK+A+ KF YPG LTALQY TS AGV G+L + HD
Sbjct: 124 QHYATSSLVIGYALCSSLLAIINKYAVTKFNYPGLLTALQYLTSAAGVWALGKLGFLCHD 303
Query: 1061 GLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAVPIFVAIGETLYLHQPWP 882
NL T KF PAAV+FY++IFTN+ LL+HA+VDTFIVFRS P+ VAI +T + QP P
Sbjct: 304 PFNLETAKKFAPAAVVFYLAIFTNTNLLVHANVDTFIVFRSLTPLLVAIADTTFRKQPCP 483
Query: 881 SLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSIDFVYIKHVVMTIGLNTWG 702
S T+ SL ILGG+V YV TD+ F++TAY+WA+AYL +++ + VYIKH+V +GLNTWG
Sbjct: 484 SKLTFSSLVIILGGAVGYVITDSAFSLTAYSWALAYLVTITAEMVYIKHIVTNLGLNTWG 663
Query: 701 LVL 693
L
Sbjct: 664 FGL 672
Score = 146 bits (313), Expect = 3e-034
Identities = 78/202 (38%), Positives = 106/202 (52%)
Frame = +1 / -1
Query: 637 SPITRSSSGNSIKASRLLYSTRPHVFSPMVITTCLMYTKSMDMLARXXXXXXXXXXXNWL 816
+P++++ G + +++ S +PHVF P +T CLMYT S ++ R N
Sbjct: 728 APLSKTKDGGYHQRKKVVSSPKPHVFRPRFVTICLMYTISAVIVTR*ASAHEYAVRLNAE 549
Query: 817 SVKT*ITLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSSLFV 996
SV T* T PP+++ + +V +GHG R VS IAT G + T+ VST A*+R +FV
Sbjct: 548 SVIT*PTAPPNMITRDENVSLEGHGCFRKVVSAIATRSGVKDLKTINVSTLA*TRRFVFV 369
Query: 997 KMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIAHLL 1176
M *N TAAG NF V + +TPA VKYC AVR PG NF+ A+LL
Sbjct: 368 NMAR*NTTAAGANFLAVSRLKGSWQRKPSFPRAQTPAADVKYCSAVRRPG*LNFVTAYLL 189
Query: 1177 MIESSDADKQYPAATP*IEACC 1242
MI S K P + CC
Sbjct: 188 MIASKLEHKA*PITRLLVA*CC 123
>gb|BE519492.1|BE519492 HV_CEb0016J10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016J10f, mRNA sequence
Length = 515
Score = 229 bits (495), Expect(2) = 3e-061
Identities = 96/115 (83%), Positives = 104/115 (90%)
Frame = -1 / +2
Query: 1292 GTTERTGAWSNMLNTLMQQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFT 1113
G+ E+TGAW+N NTLM+ AS+YGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQY T
Sbjct: 170 GSVEKTGAWNNTWNTLMRHASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYLT 349
Query: 1112 SVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIV 948
SVAGVLLCGQL+LIE D LNLRTMWKFLPAAVMFYI IFTNS LL+HA+ D FIV
Sbjct: 350 SVAGVLLCGQLRLIEPDRLNLRTMWKFLPAAVMFYI*IFTNSGLLMHANGDPFIV 514
Score = 194 bits (419), Expect = 8e-049
Identities = 74/114 (64%), Positives = 91/114 (79%)
Frame = -3 / +1
Query: 1293 RYYRENWSLE*HVEHSYAASLNLWCGCWVLFISVAALDHQQMGNHEISISWSPDSSAVFH 1114
R+ RENWSLE*H+EHSYA LWCGCW+L +S++ALD+QQMGNHE+S+ WS DS V H
Sbjct: 169 RFSRENWSLE*HMEHSYAPCFGLWCGCWLLPVSISALDYQQMGNHEVSLPWSTDSFTVPH 348
Query: 1113 *CCWSSPMWTAQAH*ARWT*LEDNVEVLTCCCDVLHLHLHK**TPASCRCGYFH 952
*CCWSSP+WTA+A+*A T E++VEVL CCC VLHL+LHK P +C+ G FH
Sbjct: 349 *CCWSSPLWTAKAY*A**TEFENHVEVLACCCYVLHLNLHKQRAPDACQWGPFH 510
Score = 154 bits (330), Expect(2) = 2e-038
Identities = 75/112 (66%), Positives = 84/112 (75%)
Frame = +2 / -1
Query: 950 Q*KYPHRHEAGVHYL*RWRCRTSQQQVRTSTLSSS*VHRAQ*A*AVHIGELQQH**NTAE 1129
+*K PH H +G L*R+RCRT QQQ RTST S+ V++AQ*A AVH GELQQH** T +
Sbjct: 512 R*KGPHWHASGARCL*RFRCRT*QQQARTSTWFSNSVYQAQ*ALAVHKGELQQH**GTVK 333
Query: 1130 LSGLQDMEIS*LPIC**SRAATLINNTQQPHHRLRLAA*ECSTCYSRLQFSR 1285
LS LQ E S*LPIC**SRA L N QQPHHR + A*ECS CYS+LQFSR
Sbjct: 332 LSVLQGRETS*LPIC**SRAEMLTGNNQQPHHRPKHGA*ECSMCYSKLQFSR 177
Score = 153 bits (329), Expect = 2e-036
Identities = 72/108 (66%), Positives = 81/108 (75%)
Frame = +1 / -3
Query: 949 TMKVSTSA*SRSSLFVKMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCR 1128
TMK S A RS LFVK++M*NITAAGKNFH+VLK RRTPATLV+YC+
Sbjct: 513 TMKGSPLACIRSPLFVKIQM*NITAAGKNFHMVLKFSLSGSISLSCPQRRTPATLVRYCK 334
Query: 1129 AVRAPGYGNFMIAHLLMIESSDADKQYPAATP*IEACCIRVFNMLLQA 1272
AV APG GNFMIAHLL+IES DAD+Q PAATP* EA IRVF++L QA
Sbjct: 333 AVSAPG*GNFMIAHLLIIESRDADRQ*PAATP*TEAWRIRVFHVLFQA 190
Score = 87.7 bits (185), Expect(2) = 3e-022
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -2 / +3
Query: 1291 VLPRELEPGVTC*TLLCSKPQSMVWLLGIVYQRRCSRSSTNGQS*NFHILEP*QLCSISL 1112
V R+LE G+T TLLC+ +SMVWLL I Q CSR STNGQS*+F LE *QL S SL
Sbjct: 171 VQSRKLELGITHGTLLCAMLRSMVWLLVIACQHLCSRLSTNGQS*SFPTLEH*QLYSTSL 350
Query: 1111 VLLEFSYV 1088
VLLEFS+V
Sbjct: 351 VLLEFSFV 374
Score = 72.5 bits (152), Expect(2) = 2e-024
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +3 / -2
Query: 1119 ILQSCQGSRIWKFHDCPFVDDREQRR**TIPSSHTID*GLLHKSVQHVTP 1268
+L SCQ SR+ K HDCPFVD+REQR * I SSHTID + HKSV V P
Sbjct: 343 VL*SCQCSRVGKLHDCPFVDNREQRC*QAITSSHTIDRSMAHKSVPCVIP 194
Score = 61.1 bits (127), Expect(2) = 2e-024
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3 / -2
Query: 948 HNESIHIGMKQEFTICEDGDVEHHSSR*ELPHCPQVKSI 1064
H+E + IGM QE +CED DVEH+SSR ELPH Q++SI
Sbjct: 514 HDERVPIGMHQEPAVCEDSDVEHNSSRQELPHGSQIQSI 398
Score = 38.2 bits (77), Expect(2) = 3e-022
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -2 / +3
Query: 1042 CGSSYLLL*CSTSPSSQIVNSCFMPM 965
CGSS LLL CSTS SSQ S MPM
Sbjct: 420 CGSSCLLLLCSTSESSQTAGS*CMPM 497
Score = 27.2 bits (53), Expect(2) = 3e-061
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / +3
Query: 1354 ASERCLISHTPQRKILHLR 1298
A RCLIS +PQ+K + R
Sbjct: 126 AGSRCLISQSPQKKTVQSR 182
Score = 26.3 bits (51), Expect(2) = 2e-038
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 1311 IFL*GV*EIRHLSDASSS 1364
+F *G+*EIRHL A+ S
Sbjct: 169 VFF*GL*EIRHLEPANPS 116
>gb|BE215036.3|BE215036 HV_CEb0005J16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005J16f, mRNA sequence
Length = 952
Score = 190 bits (410), Expect(2) = 2e-050
Identities = 84/149 (56%), Positives = 106/149 (71%)
Frame = -1 / +3
Query: 1241 QQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSVAGVLLCGQLKLIEHD 1062
Q + + GY L +SLL+IINK+A+ KF YPG LTALQY TS AGV G+L + HD
Sbjct: 99 QHYATSSLVIGYALCSSLLAIINKYAVTKFNYPGLLTALQYLTSAAGVWALGKLGFLCHD 278
Query: 1061 GLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAVPIFVAIGETLYLHQPWP 882
NL T KF PAAV+FY++IFTN+ LL+HA+VDTFIVFRS P+ VAI +T + QP P
Sbjct: 279 PFNLETAKKFAPAAVVFYLAIFTNTNLLVHANVDTFIVFRSLTPLLVAIADTTFRKQPCP 458
Query: 881 SLKTWLSLSTILGGSVIYVFTDNQFTVTA 795
S T+ SL ILGG+V YV TD+ F++TA
Sbjct: 459 SKLTFSSLVIILGGAVGYVITDSAFSLTA 545
Score = 108 bits (231), Expect(2) = 1e-026
Identities = 61/142 (42%), Positives = 76/142 (53%)
Frame = +1 / -1
Query: 817 SVKT*ITLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSSLFV 996
SV T* T PP+++ + +V +GHG R VS IAT G + T+ VST A*+R +FV
Sbjct: 523 SVIT*PTAPPNMITRDENVSLEGHGCFRKVVSAIATRSGVKDLKTINVSTLA*TRRFVFV 344
Query: 997 KMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIAHLL 1176
M *N TAAG NF V + +TPA VKYC AVR PG NF+ A+LL
Sbjct: 343 NMAR*NTTAAGANFLAVSRLKGSWQRKPSFPRAQTPAADVKYCSAVRRPG*LNFVTAYLL 164
Query: 1177 MIESSDADKQYPAATP*IEACC 1242
MI S K P + CC
Sbjct: 163 MIASKLEHKA*PITRLLVA*CC 98
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1 / -2
Query: 637 SPITRSSSGNSIKASRLLYSTRPHVFSP 720
+P+ G A RLLYST PHV P
Sbjct: 702 APLQNPKMGVYHTAXRLLYSTNPHVLDP 619
Score = 29.9 bits (59), Expect(2) = 2e-050
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 719 GLNTWGLVLYNN 684
G NTWG VLYNN
Sbjct: 620 GSNTWGFVLYNN 655
>gb|BF253631.2|BF253631 HVSMEf0001K23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001K23f, mRNA sequence
Length = 838
Score = 186 bits (401), Expect(2) = 4e-050
Identities = 77/147 (52%), Positives = 105/147 (71%)
Frame = -1 / +1
Query: 1124 QYFTSVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVF 945
QY TSV V G+L + H+ N + K+ PAA++FY++IFTN+ LL HA+V TFIVF
Sbjct: 1 QYLTSVVVVWSLGKLGFLYHEPFNFQIAKKYAPAALVFYLAIFTNTHLLKHANVHTFIVF 180
Query: 944 RSAVPIFVAIGETLYLHQPWPSLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLAS 765
RS P+ VA+ +T + QP PS T+LSL ILGG++ YV TD+ FT+TAY+WAVAYL +
Sbjct: 181 RSLTPLLVAVADTTFRKQPCPSKLTFLSLVIILGGALGYVMTDSGFTLTAYSWAVAYLIT 360
Query: 764 MSIDFVYIKHVVMTIGLNTWGLVLYNN 684
++ + VYIKH+V + L TWG V+YNN
Sbjct: 361 ITTEMVYIKHMVTNLRLTTWGSVIYNN 441
Score = 36.3 bits (73), Expect(2) = 4e-050
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -1 / +1
Query: 515 RRAISATGFTVLGIVNKLLTVVINLLIWDK 426
R+A+SAT FTV G N+ LTV IN++ DK
Sbjct: 613 RQAVSATAFTVTGGDNRYLTVGINVMN*DK 702
>gb|BF253621.2|BF253621 HVSMEf0001K13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001K13f, mRNA sequence
Length = 857
Score = 195 bits (421), Expect = 4e-049
Identities = 80/147 (54%), Positives = 108/147 (73%)
Frame = -1 / +1
Query: 1124 QYFTSVAGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVF 945
QY TSV V G+L + H+ N + K+ PAA++FY++IFTN+ LL HA+VDTFIVF
Sbjct: 1 QYLTSVVVVWSLGKLGFLYHEPFNFQIAKKYAPAALVFYLAIFTNTHLLKHANVDTFIVF 180
Query: 944 RSAVPIFVAIGETLYLHQPWPSLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLAS 765
RS P+ VA+ +T + QP PS T+LSL ILGG+V YV TD+ FT+TAY+WAVAYL +
Sbjct: 181 RSLTPLLVAVADTTFRKQPCPSKLTFLSLVIILGGAVGYVMTDSGFTLTAYSWAVAYLIT 360
Query: 764 MSIDFVYIKHVVMTIGLNTWGLVLYNN 684
++ + VYIKH+V +GL+TWG V+YNN
Sbjct: 361 ITTEMVYIKHMVTNLGLSTWGXVIYNN 441
>gb|BI777959.2|BI777959 EBro07_SQ001_I08_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ001_I08 5', mRNA sequence
Length = 491
Score = 189 bits (407), Expect(2) = 1e-048
Identities = 76/89 (85%), Positives = 84/89 (94%)
Frame = +1 / -2
Query: 334 LGAFGFVVDCW*STPPDMHIKSPMVPTKEACLSQISKLITTVRSLLTMPSTVNPVAEIAR 513
LG GFVVDCW* TPPDMHIKSP+VPT++ACLSQIS+LITTVRSL T+PSTVNPVAE+AR
Sbjct: 310 LGTLGFVVDCW*RTPPDMHIKSPIVPTRDACLSQISRLITTVRSLFTIPSTVNPVAEMAR 131
Query: 514 LQENPKKDIDNPNRHERATGRTTSNESQF 600
LQENPKKDIDNPNRH+RATGRTTS +SQF
Sbjct: 130 LQENPKKDIDNPNRHDRATGRTTS*DSQF 44
Score = 162 bits (348), Expect(2) = 5e-041
Identities = 78/118 (66%), Positives = 83/118 (70%)
Frame = -1 / +3
Query: 614 SSKVSNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLI 435
S +NWLS+DVVLPVA CRRAISATGFTVLGIVNKLLTVVINLLI
Sbjct: 30 SKMTTNWLSYDVVLPVALSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLLI 209
Query: 434 WDKHASFVGTIGLLICMSGGVLYQQSTTXXXXXXXXXXXENDEEQQKLLQMQGVQESS 261
WDKHAS VGTIGLLICMSGGVLYQQSTT E+DEE Q LLQ+Q ES+
Sbjct: 210 WDKHASLVGTIGLLICMSGGVLYQQSTTKPKVPKIEPKEEDDEEGQNLLQIQPGHESN 383
Score = 122 bits (260), Expect(2) = 6e-028
Identities = 51/83 (61%), Positives = 63/83 (75%)
Frame = -3 / +2
Query: 600 KLAFI*CGPPCCSLMPVWIINILLRILLQTSYFCYWVHSAWHS*QAPNCCD*FAYLGQAC 421
KLA +* GP CCS+MPV +I ILLRILLQT + C+W++ A +S QAP+ D AYLGQAC
Sbjct: 44 KLAIL*RGPSCCSVMPVRVIYILLRILLQTGHLCHWIYGARYSEQAPDRRDQSAYLGQAC 223
Query: 420 LFCGYHWALDMHVRWCALPAIHH 352
+ G +WALDMHV W +LPAI H
Sbjct: 224 IPGGDNWALDMHVWWRSLPAIDH 292
Score = 26.7 bits (52), Expect(2) = 5e-041
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / +3
Query: 638 EFDQMKVDSSKVS 600
EF+QMKVDSSK++
Sbjct: 3 EFNQMKVDSSKMT 41
Score = 25.4 bits (49), Expect(2) = 1e-048
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 603 HFGAVDLHLIK 635
H GAVDLHLI+
Sbjct: 38 HLGAVDLHLIE 6
Score = 23.1 bits (44), Expect(2) = 6e-028
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 639 RI*SDEGRQLQ 607
R+ SDEGRQLQ
Sbjct: 2 RVQSDEGRQLQ 34
>gb|BG366182.1|BG366182 HVSMEi0006C09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006C09f, mRNA sequence
Length = 569
Score = 194 bits (418), Expect = 1e-048
Identities = 85/151 (56%), Positives = 108/151 (71%)
Frame = -1 / +3
Query: 1241 QQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSVAGVLLCGQLKLIEHD 1062
Q + + GY L +SLL+IINK+A+ KF YPG LTALQY TS AGV G+L + HD
Sbjct: 117 QHYATSSLVIGYALCSSLLAIINKYAVTKFNYPGLLTALQYLTSAAGVWALGKLGFLCHD 296
Query: 1061 GLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAVPIFVAIGETLYLHQPWP 882
NL T KF PAAV+FY++IFTN+ LL+HA+VDTFIVFRS P+ VAI +T + QP P
Sbjct: 297 PFNLETAKKFAPAAVVFYLAIFTNTNLLVHANVDTFIVFRSLTPLLVAIADTTFRKQPCP 476
Query: 881 SLKTWLSLSTILGGSVIYVFTDNQFTVTAYT 789
S T+ SL ILGG+V YV TD+ F++TAY+
Sbjct: 477 SKLTFSSLVIILGGAVGYVITDSAFSLTAYS 569
Score = 108 bits (231), Expect = 7e-023
Identities = 61/142 (42%), Positives = 76/142 (53%)
Frame = +1 / -2
Query: 817 SVKT*ITLPPSIVESESHVLSDGHG**RYSVSPIATNIGTAERNTMKVSTSA*SRSSLFV 996
SV T* T PP+++ + +V +GHG R VS IAT G + T+ VST A*+R +FV
Sbjct: 541 SVIT*PTAPPNMITRDENVSLEGHGCFRKVVSAIATRSGVKDLKTINVSTLA*TRRFVFV 362
Query: 997 KMEM*NITAAGKNFHIVLKXXXXXXXXXXXXHRRTPATLVKYCRAVRAPGYGNFMIAHLL 1176
M *N TAAG NF V + +TPA VKYC AVR PG NF+ A+LL
Sbjct: 361 NMAR*NTTAAGANFLAVSRLKGSWQRKPSFPRAQTPAADVKYCSAVRRPG*LNFVTAYLL 182
Query: 1177 MIESSDADKQYPAATP*IEACC 1242
MI S K P + CC
Sbjct: 181 MIASKLEHKA*PITRLLVA*CC 116
>gb|BJ448607.1|BJ448607 BJ448607 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20j05 5', mRNA sequence
Length = 543
Score = 189 bits (408), Expect = 3e-047
Identities = 76/89 (85%), Positives = 85/89 (95%)
Frame = +1 / -3
Query: 334 LGAFGFVVDCW*STPPDMHIKSPMVPTKEACLSQISKLITTVRSLLTMPSTVNPVAEIAR 513
LG GFVVDCW* TPPDMHI+SP+VPT++ACLSQIS+LITTVRSLLT+PSTVNPVAE+AR
Sbjct: 280 LGTLGFVVDCW*RTPPDMHIRSPIVPTRDACLSQISRLITTVRSLLTIPSTVNPVAEMAR 101
Query: 514 LQENPKKDIDNPNRHERATGRTTSNESQF 600
LQENPKKDIDNPNRH+RATGRTTS +SQF
Sbjct: 100 LQENPKKDIDNPNRHDRATGRTTS*DSQF 14
Score = 160 bits (345), Expect = 1e-038
Identities = 77/114 (67%), Positives = 82/114 (71%)
Frame = -1 / +3
Query: 602 SNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLIWDKH 423
+NWLS+DVVLPVA CRRAISATGFTVLGIVNKLLTVVINLLIWDKH
Sbjct: 12 ANWLSYDVVLPVALSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLLIWDKH 191
Query: 422 ASFVGTIGLLICMSGGVLYQQSTTXXXXXXXXXXXENDEEQQKLLQMQGVQESS 261
AS VGTIGLLICMSGGVLYQQSTT E+DEE Q LLQ+Q ES+
Sbjct: 192 ASLVGTIGLLICMSGGVLYQQSTTKPKVPKIEPKEEDDEEGQNLLQIQPGHESN 353
Score = 121 bits (258), Expect = 1e-026
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = -3 / +2
Query: 600 KLAFI*CGPPCCSLMPVWIINILLRILLQTSYFCYWVHSAWHS*QAPNCCD*FAYLGQAC 421
KLA +* GP CCS+MPV +I ILLRILLQT + CYW++ A +S QAP+ D AYLGQAC
Sbjct: 14 KLAIL*RGPSCCSVMPVRVIYILLRILLQTGHLCYWIYGARYSQQAPDRRDQSAYLGQAC 193
Query: 420 LFCGYHWALDMHVRWCALPAIHH 352
+ G +WA DMHV W +LPAI H
Sbjct: 194 IPGGDNWAPDMHVWWRSLPAIDH 262
>gb|BJ456327.1|BJ456327 BJ456327 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20j05 3', mRNA sequence
Length = 547
Score = 188 bits (405), Expect = 7e-047
Identities = 76/89 (85%), Positives = 84/89 (94%)
Frame = +1 / +3
Query: 334 LGAFGFVVDCW*STPPDMHIKSPMVPTKEACLSQISKLITTVRSLLTMPSTVNPVAEIAR 513
LG GFVVDCW* TPPDMHI+SP+VPT++ACLSQIS LITTVRSLLT+PSTVNPVAE+AR
Sbjct: 279 LGTLGFVVDCW*RTPPDMHIRSPIVPTRDACLSQISXLITTVRSLLTIPSTVNPVAEMAR 458
Query: 514 LQENPKKDIDNPNRHERATGRTTSNESQF 600
LQENPKKDIDNPNRH+RATGRTTS +SQF
Sbjct: 459 LQENPKKDIDNPNRHDRATGRTTS*DSQF 545
Score = 158 bits (340), Expect = 6e-038
Identities = 76/114 (66%), Positives = 81/114 (71%)
Frame = -1 / -1
Query: 602 SNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLIWDKH 423
+NWLS+DVVLPVA CRRAISATGFTVLGIVNKLLTVVIN LIWDKH
Sbjct: 547 ANWLSYDVVLPVALSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINXLIWDKH 368
Query: 422 ASFVGTIGLLICMSGGVLYQQSTTXXXXXXXXXXXENDEEQQKLLQMQGVQESS 261
AS VGTIGLLICMSGGVLYQQSTT E+DEE Q LLQ+Q ES+
Sbjct: 367 ASLVGTIGLLICMSGGVLYQQSTTKPKVPKIEPKEEDDEEGQNLLQIQPGHESN 206
Score = 121 bits (259), Expect = 9e-027
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = -3 / -3
Query: 600 KLAFI*CGPPCCSLMPVWIINILLRILLQTSYFCYWVHSAWHS*QAPNCCD*FAYLGQAC 421
KLA +* GP CCS+MPV +I ILLRILLQT + CYW++ A +S QAP+ D AYLGQAC
Sbjct: 545 KLAIL*RGPSCCSVMPVRVIYILLRILLQTGHLCYWIYGARYSQQAPDRRDQXAYLGQAC 366
Query: 420 LFCGYHWALDMHVRWCALPAIHH 352
+ G +WA DMHV W +LPAI H
Sbjct: 365 IPGGDNWAPDMHVWWRSLPAIDH 297
>gb|BF624259.2|BF624259 HVSMEa0013C19f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0013C19f, mRNA sequence
Length = 498
Score = 160 bits (345), Expect = 1e-038
Identities = 71/128 (55%), Positives = 89/128 (69%)
Frame = -1 / +2
Query: 1241 QQASIYGVAAGYCLSASLLSIINKWAIMKFPYPGALTALQYFTSVAGVLLCGQLKLIEHD 1062
Q + + GY L +SLL+IINK+A+ KF YPG LTALQY TS AGV G+L + HD
Sbjct: 113 QHYATSNLVIGYALCSSLLAIINKYAVTKFNYPGLLTALQYLTSAAGVWALGKLGFLCHD 292
Query: 1061 GLNLRTMWKFLPAAVMFYISIFTNSELLLHADVDTFIVFRSAVPIFVAIGETLYLHQPWP 882
NL T KF PAA +FY++IFTN+ LL+HA+VDTFIVFRS P+ VAI +T + QP P
Sbjct: 293 PFNLETAKKFAPAADVFYLAIFTNTNLLVHANVDTFIVFRSLTPLLVAIADTTFPKQPCP 472
Query: 881 SLKTWLSL 858
S T+ SL
Sbjct: 473 SKLTFSSL 496
>gb|BJ452154.1|BJ452154 BJ452154 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37p10 5', mRNA sequence
Length = 570
Score = 97.3 bits (206), Expect(2) = 5e-035
Identities = 42/87 (48%), Positives = 50/87 (57%)
Frame = -1 / +1
Query: 611 SKVSNWLSFDVVLPVAXXXXXXXXXXXXXXXCRRAISATGFTVLGIVNKLLTVVINLLIW 432
S+ W D + VA R+AISAT FTV G+VNK LTV IN+ IW
Sbjct: 208 SRGEGWFQLDAFVAVALSCLFGLLISFFGFAARKAISATAFTVTGVVNKFLTVAINVTIW 387
Query: 431 DKHASFVGTIGLLICMSGGVLYQQSTT 351
DKHAS G + LL ++GGVLYQQS T
Sbjct: 388 DKHASAFGLVSLLFTLAGGVLYQQSVT 468
Score = 76.7 bits (161), Expect(2) = 8e-025
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +1 / -2
Query: 409 PTKEACLSQISKLITTVRSLLTMPSTVNPVAEIARLQENPKKDIDNPNRHERATGRTTSN 588
P ACLSQI LI TVR+L T P TVN VAEIA L PKK + NPN+H+ AT S+
Sbjct: 410 PNALACLSQIVTLIATVRNLFTTPVTVNAVAEIAFLAAKPKKLMSNPNKHDNATATNASS 231
Query: 589 ESQ 597
+Q
Sbjct: 230 WNQ 222
Score = 71.6 bits (150), Expect(2) = 5e-035
Identities = 25/42 (59%), Positives = 35/42 (83%)
Frame = -1 / +1
Query: 809 FTVTAYTWAVAYLASMSIDFVYIKHVVMTIGLNTWGLVLYNN 684
F++TA +WA+AYL +++ + VYIKH+V +GLNTWG VLYNN
Sbjct: 7 FSLTA*SWALAYLVTITAEMVYIKHIVTNLGLNTWGFVLYNN 132
Score = 57.9 bits (120), Expect(2) = 8e-025
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 637 SPITRSSSGNSIKASRLLYSTRPHVFSPMVITTCLMYTKSMDMLAR 774
SP+ G+ I RLLYST+PHVF P +T CLMYT S ++ R
Sbjct: 179 SPVKNQKMGDIINERRLLYSTKPHVFRPRFVTICLMYTISAVIVTR 42
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 737,953,020
Number of Sequences: 312970
Number of extensions: 12557345
Number of successful extensions: 87765
Number of sequences better than 1.0e-020: 24
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18429729129
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)