TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184927.2.1
(1157 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 229 e-111
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 193 2e-080
gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-a... 285 3e-076
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 122 2e-052
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 122 2e-047
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 122 2e-047
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 122 3e-047
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 122 5e-045
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 121 7e-040
gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa... 127 9e-040
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 122 9e-040
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 122 9e-040
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 136 2e-039
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 136 2e-039
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 136 2e-039
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 122 2e-039
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 122 2e-039
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 122 2e-039
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 135 4e-039
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 127 4e-039
gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa... 127 8e-039
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 120 1e-038
gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-a... 118 2e-038
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 127 3e-038
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 127 4e-038
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 122 2e-037
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 122 3e-037
gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 ... 127 4e-037
gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 ... 127 2e-036
gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa... 127 3e-036
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 113 4e-036
gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. v... 127 1e-035
gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa... 127 1e-035
gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa... 127 2e-035
gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke devel... 127 2e-035
gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgar... 127 2e-035
gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa... 127 2e-035
gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA,... 127 2e-035
gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, n... 127 2e-035
gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no... 127 2e-035
gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 ... 127 2e-035
gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA,... 127 2e-035
gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 ... 127 2e-035
gb|BG418507.1|BG418507 HVSMEk0022O17f Hordeum vulgare testa... 127 2e-035
gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, ... 127 2e-035
gb|BG415421.2|BG415421 HVSMEk0006G24f Hordeum vulgare testa... 125 4e-035
gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa... 122 8e-035
gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa... 127 8e-035
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 122 1e-034
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 122 1e-034
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 122 1e-034
gb|BM099821.2|BM099821 EBes01_SQ004_F24_R embryo sac, 4-6 D... 127 1e-034
gb|BI776379.2|BI776379 EBpi05_SQ001_B03_R pistil, 8 DPA, no... 127 1e-034
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 122 1e-034
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 122 2e-034
gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke devel... 123 3e-034
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 122 3e-034
gb|BM099969.2|BM099969 EBes01_SQ004_M17_R embryo sac, 4-6 D... 127 3e-034
gb|BU980172.1|BU980172 HA18O07r HA Hordeum vulgare subsp. v... 127 6e-034
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 122 2e-033
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 122 2e-033
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 122 2e-033
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 134 2e-033
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 118 2e-033
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 122 3e-033
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 134 4e-033
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 136 4e-033
gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 ... 106 7e-033
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 87 1e-032
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 135 1e-032
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 134 1e-032
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 122 2e-032
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 116 3e-032
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 133 4e-032
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 72 5e-032
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 132 1e-031
gb|BG415394.2|BG415394 HVSMEk0006F01f Hordeum vulgare testa... 93 2e-030
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 133 2e-030
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 62 2e-030
gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, n... 132 5e-030
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 132 5e-030
gb|AL507080.1|AL507080 AL507080 Hordeum vulgare Barke devel... 100 6e-030
gb|CA022672.1|CA022672 HZ44A09r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|CA021688.1|CA021688 HZ40M24r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|CA026014.1|CA026014 HZ53N10r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|CA024529.1|CA024529 HZ49J01r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|CA025466.1|CA025466 HZ52D24r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|CA028522.1|CA028522 HZ62E15r HZ Hordeum vulgare subsp. v... 100 6e-030
gb|BQ463596.1|BQ463596 HI05N09r HI Hordeum vulgare subsp. v... 100 6e-030
gb|BI950383.1|BI950383 HVSMEl0020H16f Hordeum vulgare spike... 118 1e-029
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 59 1e-029
gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. v... 122 2e-029
gb|BG299416.1|BG299416 HVSMEa0019O06f Hordeum vulgare seedl... 59 4e-029
gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedl... 109 7e-029
gb|BG417852.1|BG417852 HVSMEk0019M01f Hordeum vulgare testa... 127 2e-028
gb|BQ762251.1|BQ762251 EBro01_SQ005_C12_R root, 3 week, hyd... 127 2e-028
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 116 2e-028
gb|AL508824.1|AL508824 AL508824 Hordeum vulgare Barke devel... 59 3e-028
gb|BE215940.1|BE215940 HV_CEb0008O10f Hordeum vulgare seedl... 59 3e-028
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 73 5e-028
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 62 5e-028
gb|AL503414.1|AL503414 AL503414 Hordeum vulgare Barke roots... 125 6e-028
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 118 9e-028
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 62 1e-027
gb|CA028585.1|CA028585 HZ62I09r HZ Hordeum vulgare subsp. v... 95 1e-027
gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedl... 100 3e-027
gb|AV934159.1|AV934159 AV934159 K. Sato unpublished cDNA li... 122 4e-027
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 116 4e-027
gb|BI958218.1|BI958218 HVSMEn0013O24f Hordeum vulgare rachi... 116 4e-027
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 62 5e-027
gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. v... 59 6e-027
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 62 9e-027
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 96 9e-027
gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedl... 62 2e-026
gb|BF259291.3|BF259291 HVSMEf0018M18f Hordeum vulgare seedl... 95 4e-026
gb|BF629372.2|BF629372 HVSMEb0012B02f Hordeum vulgare seedl... 59 6e-026
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 62 8e-026
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 62 8e-026
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 62 8e-026
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 56 8e-026
gb|CA022119.1|CA022119 HZ42D14r HZ Hordeum vulgare subsp. v... 86 1e-025
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 62 1e-025
gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachi... 62 1e-025
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 116 2e-025
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 116 2e-025
gb|BI953687.1|BI953687 HVSMEm0013N22f Hordeum vulgare green... 79 2e-025
gb|CK123698.1|CK123698 BES1824105b24 BES1824 Hordeum vulgar... 116 3e-025
gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. v... 96 7e-025
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 69 2e-024
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 56 3e-024
gb|BG416445.2|BG416445 HVSMEk0012E19f Hordeum vulgare testa... 112 4e-024
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 70 4e-024
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 96 6e-024
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 76 8e-024
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 89 8e-024
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 73 1e-023
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 73 2e-023
gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachi... 62 3e-023
gb|BG415494.2|BG415494 HVSMEk0006L12f Hordeum vulgare testa... 65 3e-023
gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. v... 76 3e-023
gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. v... 76 3e-023
gb|BG414733.1|BG414733 HVSMEk0003H17f Hordeum vulgare testa... 69 4e-023
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 74 4e-023
gb|BU973464.1|BU973464 HB25A15r BC Hordeum vulgare subsp. v... 100 4e-023
gb|CA029028.1|CA029028 HZ63P19r HZ Hordeum vulgare subsp. v... 100 4e-023
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 56 9e-023
gb|BM816368.1|BM816368 HB02H12_T3.ab1 HB Hordeum vulgare su... 59 9e-023
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 73 2e-022
gb|CA023175.1|CA023175 HZ45H08r HZ Hordeum vulgare subsp. v... 106 2e-022
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 61 3e-022
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 61 3e-022
gb|CA028959.1|CA028959 HZ63L24r HZ Hordeum vulgare subsp. v... 98 3e-022
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 73 7e-022
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 62 1e-021
gb|CA028570.1|CA028570 HZ62H10r HZ Hordeum vulgare subsp. v... 61 2e-021
gb|BU986702.1|BU986702 HF12K17r HF Hordeum vulgare subsp. v... 103 2e-021
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 74 2e-021
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 64 3e-021
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 57 3e-021
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 57 3e-021
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 64 3e-021
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 63 3e-021
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 59 5e-021
gb|BU974025.1|BU974025 HB26K23r BC Hordeum vulgare subsp. v... 65 6e-021
gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. v... 73 8e-021
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 64 9e-021
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 57 1e-020
>gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N22f, mRNA sequence
Length = 873
Score = 229 bits (495), Expect(2) = e-111
Identities = 101/189 (53%), Positives = 129/189 (68%)
Frame = -1 / +1
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
++ SKE+ L A+NGTLNVLRSCKKNPFLKRVVLTSSSS VR+RD+ N+ LDET+W
Sbjct: 286 NADSKEEMLDSAINGTLNVLRSCKKNPFLKRVVLTSSSSTVRLRDEAEFPPNVLLDETSW 465
Query: 695 SSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVL 516
SSV CE + +WYA+ EN IDLV VLP+FV+GP+LS L TAS+VL
Sbjct: 466 SSVEFCESIQIWYAVAKILAEKSAWEFAKENNIDLVAVLPTFVVGPNLSPVLAPTASNVL 645
Query: 515 GLFQGDTARFSSYGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLDNDELVSSLAKR 336
GLF+G+T +F+ R GYVH+D++AS IL Y+ G +C+ L D+LV L KR
Sbjct: 646 GLFKGETEKFTHLRRNGYVHLDELASCPILSYKTRAPRGGTICNLAGLWFDQLVPLLPKR 825
Query: 335 YPIFPIPRR 309
P FPIP++
Sbjct: 826 VPAFPIPKK 852
Score = 193 bits (417), Expect(2) = e-111
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = -1 / +1
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A SKGKVCVTGASGFVASWL+KRLLESGYHV+GTVRDPGN +K AHLW L GAKERL++
Sbjct: 16 ANTSKGKVCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQKKVAHLWNLAGAKERLEL 195
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDS 870
VRADLLEEGSFD AVMACEGVFHTASP++ DS
Sbjct: 196 VRADLLEEGSFDDAVMACEGVFHTASPIITNADS 297
Score = 190 bits (409), Expect(2) = 2e-089
Identities = 91/146 (62%), Positives = 105/146 (71%)
Frame = +1 / -2
Query: 427 RMWLLATSSMWTYPILPYELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPF 606
+M LA+SS TYP L +N +VSP N+PRT EAV ++ ++LGP TN GRT TRSM F
Sbjct: 734 KMGQLASSSK*TYPFLRRWVNFSVSPLNKPRTFEAVGANTGERLGPTTNVGRTATRSMLF 555
Query: 607 SLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTL 786
SLANS A FSA LA AYH + SQ+ TELH VSSS L SSL LT DD+DVRTTL
Sbjct: 554 SLANSQADFSARILATAYHIWMLSQNSTELHDVSSSSTLGGNSASSLSLTVDDDDVRTTL 375
Query: 787 FRNGFFLHDLSTFRVPFTAGTSVSSL 864
RNGFFL DLSTFRVPF A +S+SSL
Sbjct: 374 LRNGFFLQDLSTFRVPFIAESSISSL 297
Score = 160 bits (344), Expect(2) = 2e-089
Identities = 72/91 (79%), Positives = 74/91 (81%)
Frame = +1 / -2
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLT 1047
+ES L GDAVW TPSQAITA SKLPSS RSA T SLSLAP FQR A F+* PGSLT
Sbjct: 299 LESALVMIGDAVWKTPSQAITASSKLPSSKRSALTSSSLSLAPAKFQRCATFF*LPGSLT 120
Query: 1048 VPTT*YPDSRSRLISQEATKPEAPVTHTLPL 1140
VP T*YPDSRSRL SQEATKPEAPVTHTLPL
Sbjct: 119 VPRT*YPDSRSRLTSQEATKPEAPVTHTLPL 27
Score = 109 bits (232), Expect(2) = 1e-049
Identities = 51/120 (42%), Positives = 70/120 (58%)
Frame = +3 / -1
Query: 519 DV*SGNA*FVGQTGPDHERREDSHKVDAVLLGELPRRFLCKYLG*GIP*MHLLAEWHGAP 698
D+* G * G+ D ERR+D H+VD VLLGELP FL + LG +P + AE GAP
Sbjct: 642 DI*GGGG*HGGEVRADDERRKDGHEVDVVLLGELPG*FLSEDLGDSVPYLDAFAELDGAP 463
Query: 699 CRFVQRDVTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVG 878
F+Q+ V G + + PH +D+P ++ +LLA SQHVQ V+RR + L +G
Sbjct: 462 *CFIQQHVGGEFSFISQPHGRRRRREDNPLEKWILLAGSQHVQGAVYRRIKHFFLGISIG 283
Score = 108 bits (230), Expect(2) = 1e-049
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3 / -1
Query: 873 VGFSEDGGCSVEYTLTGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSP 1052
+ +D CSVE TL HHG VEAPFFQ++S H+LQPL * P+V LL+I+WV D P
Sbjct: 294 ISIGDDRRCSVEDTLASHHGIVEAPFFQEVSPHELQPLLGTS*VPEVCYLLLIAWVSDCP 115
Query: 1053 YHMISRLEEPFDKPRGNK 1106
+MI L++PFDKPRG++
Sbjct: 114 *NMIPGLKKPFDKPRGDE 61
Score = 91.8 bits (194), Expect(3) = 9e-032
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -3 / +3
Query: 1140 QGQGMRNRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXXXAS* 961
QGQG+ + L LLA QTA V +SC RD Q PR+S + S PLE++W *
Sbjct: 27 QGQGVCHWSLWFRRLLACQTAS*VRVSCSRDSQRPRQSEEGSTPLELSWCQGEAGAREG* 206
Query: 960 SVGRRELRQRRDGL*GCIPHCI 895
+GRRELR+ RDGL GC+PHCI
Sbjct: 207 PLGRRELRRCRDGLRGCLPHCI 272
Score = 46.4 bits (95), Expect(3) = 9e-032
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = -3 / +3
Query: 714 AGRNDMELRATLREDASMVCPSQGICRESGVGVRQGERHRPCDCPPVVRDR 562
AG N MELR LR+ MV Q E +GVRQGE+HRP P VR R
Sbjct: 447 AG*NIMELRRVLRKHPDMVRCRQDPR*EISLGVRQGEQHRPRGRPSDVRRR 599
Score = 37.3 bits (75), Expect(3) = 9e-032
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -3 / +3
Query: 864 QGGHARPCGERYSERAEIVQEEPVPEKGRPYVFVV 760
QG +A +R+ ERAEI+QEE + ++G P+V VV
Sbjct: 297 QGRNA*FGDKRHPERAEILQEESISQEGCPHVVVV 401
>gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013N24f, mRNA sequence
Length = 896
Score = 193 bits (417), Expect(2) = 2e-080
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = -1 / +3
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A SKGKVCVTGASGFVASWL+KRLLESGYHV+GTVRDPGN +K AHLW L GAKERL++
Sbjct: 15 ANTSKGKVCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQKKVAHLWNLAGAKERLEL 194
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDS 870
VRADLLEEGSFD AVMACEGVFHTASP++ DS
Sbjct: 195 VRADLLEEGSFDDAVMACEGVFHTASPIITNADS 296
Score = 160 bits (344), Expect(2) = 1e-071
Identities = 72/91 (79%), Positives = 74/91 (81%)
Frame = +1 / -2
Query: 868 VESGLARTGDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLT 1047
+ES L GDAVW TPSQAITA SKLPSS RSA T SLSLAP FQR A F+* PGSLT
Sbjct: 298 LESALVMIGDAVWKTPSQAITASSKLPSSKRSALTSSSLSLAPAKFQRCATFF*LPGSLT 119
Query: 1048 VPTT*YPDSRSRLISQEATKPEAPVTHTLPL 1140
VP T*YPDSRSRL SQEATKPEAPVTHTLPL
Sbjct: 118 VPRT*YPDSRSRLTSQEATKPEAPVTHTLPL 26
Score = 130 bits (279), Expect(2) = 1e-071
Identities = 64/102 (62%), Positives = 71/102 (69%)
Frame = +1 / -2
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSSEMLLDWPP 738
GP TN TR M FSLANS FSA LA+AY+ + SQ+ TELH VSSS L
Sbjct: 601 GPTTNVEGPPTRLMLFSLANSQVDFSARILAQAYNIWMLSQNSTELHDVSSSSTLGGNSA 422
Query: 739 SSLILTADDEDVRTTLFRNGFFLHDLSTFRVPFTAGTSVSSL 864
SSL LT DD+DVRTTL RNGFFL DLSTFRVPF A +S+SSL
Sbjct: 421 SSLSLTVDDDDVRTTLLRNGFFLQDLSTFRVPFIAESSISSL 296
Score = 126 bits (270), Expect(2) = 2e-080
Identities = 57/106 (53%), Positives = 70/106 (66%)
Frame = -1 / +3
Query: 875 DSTSKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTW 696
++ SKE+ L A+NGTLNVLRSCKKNPFLKRVVLTSSSS VR+RD+ N+ LDET+W
Sbjct: 285 NADSKEEMLDSAINGTLNVLRSCKKNPFLKRVVLTSSSSTVRLRDEAEFPPNVLLDETSW 464
Query: 695 SSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGP 558
SSV CE + + YA EN I+LV +FV+GP
Sbjct: 465 SSVEFCESIQILYACAKILAEKSTWEFAKENNINLVGGPSTFVVGP 602
Score = 108 bits (230), Expect(2) = 5e-043
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +3 / -1
Query: 873 VGFSEDGGCSVEYTLTGHHGAVEAPFFQQISSHDLQPLFSAR*FPKVGCLLVISWVPDSP 1052
+ +D CSVE TL HHG VEAPFFQ++S H+LQPL * P+V LL+I+WV D P
Sbjct: 293 ISIGDDRRCSVEDTLASHHGIVEAPFFQEVSPHELQPLLGTS*VPEVCYLLLIAWVSDCP 114
Query: 1053 YHMISRLEEPFDKPRGNK 1106
+MI L++PFDKPRG++
Sbjct: 113 *NMIPGLKKPFDKPRGDE 60
Score = 91.8 bits (194), Expect(3) = 5e-028
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -3 / +2
Query: 1140 QGQGMRNRGLRLCCLLAYQTAPRVWISCGRDCQGPRKSPKDSPPLEITWXXXXXXXXAS* 961
QGQG+ + L LLA QTA V +SC RD Q PR+S + S PLE++W *
Sbjct: 26 QGQGVCHWSLWFRRLLACQTAS*VRVSCSRDSQRPRQSEEGSTPLELSWCQGEAGAREG* 205
Query: 960 SVGRRELRQRRDGL*GCIPHCI 895
+GRRELR+ RDGL GC+PHCI
Sbjct: 206 PLGRRELRRCRDGLRGCLPHCI 271
Score = 87.2 bits (184), Expect(2) = 5e-043
Identities = 41/105 (39%), Positives = 58/105 (55%)
Frame = +3 / -1
Query: 564 DHERREDSHKVDAVLLGELPRRFLCKYLG*GIP*MHLLAEWHGAPCRFVQRDVTGLATVV 743
D ER +H+VD V GELP FL + LG + + AE GAP F+Q+ V G + +
Sbjct: 596 DDERGRTAHEVDVVFFGELPG*FLSEDLGASVQYLDAFAELDGAP*CFIQQHVGGEFSFI 417
Query: 744 PDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLLASRVG 878
PH +D+P ++ +LLA SQHVQ V+RR + L +G
Sbjct: 416 SQPHGRRRRREDNPLEKWILLAGSQHVQGAVYRRIKHFFLGISIG 282
Score = 37.3 bits (75), Expect(3) = 5e-028
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -3 / +2
Query: 864 QGGHARPCGERYSERAEIVQEEPVPEKGRPYVFVV 760
QG +A +R+ ERAEI+QEE + ++G P+V VV
Sbjct: 296 QGRNA*FGDKRHPERAEILQEESISQEGCPHVVVV 400
Score = 33.6 bits (67), Expect(3) = 5e-028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3 / +2
Query: 714 AGRNDMELRATLREDASMVCPSQGICRESGVGVRQGERHRP 592
AG N MELR LR+ +V Q E +GVRQ ++H+P
Sbjct: 446 AG*NIMELRRVLRKHPDIVRLRQDPR*EINLGVRQRKQHQP 568
>gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N13f, mRNA sequence
Length = 584
Score = 285 bits (617), Expect = 3e-076
Identities = 120/194 (61%), Positives = 146/194 (75%)
Frame = -1 / +2
Query: 839 VNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLW 660
+NGTLNVLRSCKKNPFLKRVVLTSSSS VR+RD+ N+ LDET+WSSV CE + +W
Sbjct: 2 INGTLNVLRSCKKNPFLKRVVLTSSSSTVRLRDEAEFPPNVLLDETSWSSVEFCESIQIW 181
Query: 659 YALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSS 480
YA+ EN IDLV VLP+FV+GP+LS L TASDVLGLF+G+T +F+
Sbjct: 182 YAVAKILAEKSAWEFAKENNIDLVAVLPTFVVGPNLSPVLGPTASDVLGLFKGETEKFTI 361
Query: 479 YGRMGYVHIDDVASSHILVYEAPQAAGRYLCSSVVLDNDELVSSLAKRYPIFPIPRRLNS 300
+GRMGYVHIDDVAS HILVYE A GRY+C+S VL +DELV+ LAKR+P FPIP+ L +
Sbjct: 362 FGRMGYVHIDDVASCHILVYETADAKGRYICNSAVLGSDELVALLAKRFPSFPIPKSLPN 541
Query: 299 PYGKQSYQLNTSKL 258
YG+Q+Y NTS +
Sbjct: 542 IYGEQTYGYNTSXI 583
Score = 241 bits (521), Expect = 5e-063
Identities = 116/191 (60%), Positives = 126/191 (65%)
Frame = +1 / -3
Query: 265 DVFSWYDCLP*GLFSLRGMGNIG*RFAXXXXXXXXXXXXXXHRYLPAAWGASYTRMWLLA 444
DV Y C P* L L GMGN G RFA YLP A S TRMW LA
Sbjct: 576 DVL*PYVCSP*MLGKLFGMGNDGNRFASKATSSSLPRTAELQMYLPLASAVS*TRMWQLA 397
Query: 445 TSSMWTYPILPYELNLAVSPWNRPRTSEAVTHSSWDKLGPITNDGRTVTRSMPFSLANSH 624
TSSMWTYPILP +N +VSP N+PRTSEAV ++ ++LGP TN GRT TRSM FSLANS
Sbjct: 396 TSSMWTYPILPKMVNFSVSPLNKPRTSEAVGPNTGERLGPTTNVGRTATRSMLFSLANSQ 217
Query: 625 AAFSANTLARAYHRCIFSQSGTELHVVSSSEMLLDWPPSSLILTADDEDVRTTLFRNGFF 804
A FSA LA AYH + SQ+ TELH VSSS L SSL LT DD+DVRTTL RNGFF
Sbjct: 216 ADFSARILATAYHIWMLSQNSTELHDVSSSSTLGGNSASSLSLTVDDDDVRTTLLRNGFF 37
Query: 805 LHDLSTFRVPF 837
L DLSTFRVPF
Sbjct: 36 LQDLSTFRVPF 4
Score = 112 bits (240), Expect(2) = 5e-026
Identities = 57/145 (39%), Positives = 77/145 (53%)
Frame = +3 / -2
Query: 405 GLGGLVHQXXXXXXXXXXXXPHSSVRAEPCRVALE*A*DV*SGNA*FVGQTGPDHERRED 584
G+ G V Q PH E R+ + A D+* G A* G+ D ERR+D
Sbjct: 436 GVRGFVDQDVAARDVVDVDVPHPPEDGELLRLPFKQAKDI*GGGA*HGGEVRADDERRKD 257
Query: 585 SHKVDAVLLGELPRRFLCKYLG*GIP*MHLLAEWHGAPCRFVQRDVTGLATVVPDPHXXX 764
H+VD VLLGELP FL + LG +P + AE GAP F+Q+ V G + + PH
Sbjct: 256 GHEVDVVLLGELPG*FLSEDLGDSVPYLDAFAELDGAP*CFIQQHVGGEFSFISQPHGRR 77
Query: 765 XXXKDDPFQERVLLARSQHVQSTVH 839
+D+P ++ +LLA SQHVQ V+
Sbjct: 76 RRREDNPLEKWILLAGSQHVQGAVY 2
Score = 69.3 bits (145), Expect(3) = 7e-025
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = -2 / +3
Query: 538 ALPLQTS*AYSKATRQGSARTEEWGXXXXXXXXXXXSWCTRPPRPPGGTCAAQWCWTTTS 359
A P Q S A K R+ S + WG SW T+P P GGT A + W TS
Sbjct: 303 APPPQMSLACLKGRRRSSPSSGGWGTSTSTTSRAATSWSTKPRTPRGGTSATRRFWVATS 482
Query: 358 WSPRSRNATRYSP 320
WSP SRN +R SP
Sbjct: 483 WSPCSRNGSRRSP 521
Score = 46.4 bits (95), Expect(3) = 7e-025
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = -3 / +1
Query: 714 AGRNDMELRATLREDASMVCPSQGICRESGVGVRQGERHRPCDCPPVVRDR 562
AG N MELR LR+ MV Q E +GVRQGE+HRP P VR R
Sbjct: 127 AG*NIMELRRVLRKHPDMVRCRQDPR*EISLGVRQGEQHRPRGRPSDVRRR 279
Score = 36.3 bits (73), Expect(3) = 7e-025
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -3 / +1
Query: 837 ERYSERAEIVQEEPVPEKGRPYVFVV 760
+R+ ERAEI+QEE + ++G P+V VV
Sbjct: 4 KRHPERAEILQEESISQEGCPHVVVV 81
Score = 25.4 bits (49), Expect(2) = 5e-026
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 321 GEYRVAFRERGDQL 362
GE R FRE+GDQL
Sbjct: 520 GERREPFREQGDQL 479
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 122 bits (262), Expect(4) = 2e-052
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 85 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 264
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 265 EGTFDAAIAGCDCVFHTASP 324
Score = 81.7 bits (172), Expect(3) = 2e-022
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVW T SQ A SK+PSSN+ A CSLSLAP R VF S TV T P
Sbjct: 323 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 144
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
R L SQEA PEAPVTHT
Sbjct: 143 WRRSLTSQEAM*PEAPVTHT 84
Score = 63.8 bits (133), Expect(4) = 2e-052
Identities = 28/101 (27%), Positives = 51/101 (50%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 427 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 606
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSY 477
+ ++T+ P+ VIGP L L +A +L G ++ ++ +
Sbjct: 607 LXIITINPTMVIGPLLQPTLNTSAEAILKXINGSSSTYAHF 729
Score = 44.1 bits (90), Expect(4) = 2e-052
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 349 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 453
Score = 42.8 bits (87), Expect(3) = 2e-022
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +1 / -3
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSS 714
GP+T G V P S AN HAA SA L YH FSQ+ + VSS+
Sbjct: 647 GPMTIVGFIVIIXNPLSFANFHAASSARVLDSTYHCLFFSQTSALENHVSST 492
Score = 32.7 bits (65), Expect(4) = 2e-052
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 467 GYVHIDDVASSHILVYEAPQA 405
G+V++ DVA +HIL YE P A
Sbjct: 736 GWVNVKDVALAHILAYEDPSA 798
Score = 24.4 bits (47), Expect(3) = 2e-022
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1 / -3
Query: 388 HRYLPAAWGASYTRMWLLATSSMWTYP 468
H A G+SY R+ ATS +T+P
Sbjct: 815 HAISXVAEGSSYARICARATSLTFTHP 735
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 122 bits (262), Expect(3) = 2e-047
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 78 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 257
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 258 EGTFDAAIAGCDCVFHTASP 317
Score = 81.7 bits (172), Expect(2) = 3e-021
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = +1 / -2
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVW T SQ A SK+PSSN+ A CSLSLAP R VF S TV T P
Sbjct: 316 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 137
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
R L SQEA PEAPVTHT
Sbjct: 136 WRRSLTSQEAM*PEAPVTHT 77
Score = 61.1 bits (127), Expect(3) = 2e-047
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = -1 / +3
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 420 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNG 599
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVL 516
++++T+ P+ VIGP L L +A +L
Sbjct: 600 LEIITINPTMVIGPLLQPTLNTSAEAIL 683
Score = 44.1 bits (90), Expect(3) = 2e-047
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 342 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 446
Score = 43.2 bits (88), Expect(2) = 3e-021
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +1 / -2
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSS 714
GP+T G V S P S AN HAA SA L YH FSQ+ + VSS+
Sbjct: 640 GPMTIVGFIVIISNPLSFANFHAASSARVLDSTYHC*FFSQTSALENHVSST 485
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 122 bits (262), Expect(3) = 2e-047
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 62 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 241
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 242 EGTFDAAIAGCDCVFHTASP 301
Score = 81.7 bits (172), Expect(2) = 3e-021
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = +1 / -2
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVW T SQ A SK+PSSN+ A CSLSLAP R VF S TV T P
Sbjct: 300 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 121
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
R L SQEA PEAPVTHT
Sbjct: 120 WRRSLTSQEAM*PEAPVTHT 61
Score = 61.1 bits (127), Expect(3) = 2e-047
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 404 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNG 583
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVL 516
++++T+ P+ VIGP L L +A +L
Sbjct: 584 LEIITINPTMVIGPLLQPTLNTSAEAIL 667
Score = 44.1 bits (90), Expect(3) = 2e-047
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 326 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 430
Score = 43.2 bits (88), Expect(2) = 3e-021
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +1 / -2
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSS 714
GP+T G V S P S AN HAA SA L YH FSQ+ + VSS+
Sbjct: 624 GPMTIVGFIVIISNPLSFANFHAASSARVLDSTYHC*FFSQTSALENHVSST 469
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 122 bits (262), Expect(3) = 3e-047
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 107 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 286
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 287 EGTFDAAIAGCDCVFHTASP 346
Score = 81.7 bits (172), Expect(2) = 1e-021
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = +1 / -1
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G+AVW T SQ A SK+PSSN+ A CSLSLAP R VF S TV T P
Sbjct: 345 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 166
Query: 1072 SRSRLISQEATKPEAPVTHT 1131
R L SQEA PEAPVTHT
Sbjct: 165 WRRSLTSQEAM*PEAPVTHT 106
Score = 60.6 bits (126), Expect(3) = 3e-047
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 449 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 628
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTA 492
+++T+ P+ VIGP L L A +L G ++
Sbjct: 629 FEIITINPTMVIGPLLQPTLNSCAEAILKFINGSSS 736
Score = 45.1 bits (92), Expect(2) = 1e-021
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +1 / -1
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAYHRCIFSQSGTELHVVSSS 714
GP+T G V S P S AN HAA SA L YH FSQ+ + VSS+
Sbjct: 669 GPMTMVGFIVIISNPLSFANFHAASSARVLDSTYHCLFFSQTSALENHVSST 514
Score = 44.1 bits (90), Expect(3) = 3e-047
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 371 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 475
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 122 bits (262), Expect(3) = 5e-045
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 31 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 210
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 211 EGTFDAAIAGCDCVFHTASP 270
Score = 55.1 bits (114), Expect(3) = 5e-045
Identities = 27/101 (26%), Positives = 48/101 (47%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 373 VIVTSSMAACAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 552
Query: 599 IDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSY 477
I+ T+ + IGP L L A +L G ++ ++++
Sbjct: 553 IENNTINSTMGIGPLLQPTLNTNAEAILEFINGSSSTYANF 675
Score = 42.3 bits (86), Expect(3) = 5e-045
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L P VNGTLNVLRSCKK + +V +S ++
Sbjct: 295 KAELLDPTVNGTLNVLRSCKKASIKRVIVTSSMAA 399
>gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24V 5', mRNA sequence
Length = 700
Score = 121 bits (258), Expect(3) = 7e-040
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ SWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 103 VCVTGASGYIXSWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 282
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 283 EGTFDAAIAGCDCVFHTASP 342
Score = 44.1 bits (90), Expect(3) = 7e-040
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 367 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 471
Score = 37.7 bits (76), Expect(3) = 7e-040
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENG 600
V+ +SS A + ++ ++ +DET +SS +CEK WY L +NG
Sbjct: 445 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAXDNG 624
Query: 599 I 597
+
Sbjct: 625 L 627
>gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0023M18f, mRNA sequence
Length = 816
Score = 127 bits (271), Expect(3) = 9e-040
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 51 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 230
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 231 DLSEDGSFNEAIAGCTGVFHVATPM 305
Score = 79.9 bits (168), Expect(3) = 7e-021
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 301 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 122
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 121 WRSFMTSHDPTKPDAPVTTTGPL 53
Score = 42.8 bits (87), Expect(3) = 9e-040
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 327 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 449
Score = 37.7 bits (76), Expect(3) = 9e-040
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = -1 / +3
Query: 605 NGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFSSYGRMGYVHIDDVASSHIL 426
NG+D ++++ + V+GP LS + + L L G+ +S ++ VH+ D+ + +
Sbjct: 582 NGLDFISIIXTLVVGPFLSAGMPPSLVTALALITGNEDHYSILKQVQLVHLYDLCDA*LF 761
Query: 425 VYEAPQAAGRYL 390
A Y+
Sbjct: 762 SLTPADDAATYV 797
Score = 35.4 bits (71), Expect(3) = 7e-021
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1 / -3
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
GP T+ + +S PFSLA S AAFSA L Y
Sbjct: 628 GPTTSVXMMLMKSRPFSLAYSMAAFSARALDTKY 527
Score = 23.1 bits (44), Expect(3) = 7e-021
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -2
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 470 VVGWPRPLLDVDAAGGGGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 327
>gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i12 5', mRNA sequence
Length = 585
Score = 122 bits (262), Expect(3) = 9e-040
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 111 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 290
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 291 EGTFDAAIAGCDCVFHTASP 350
Score = 44.1 bits (90), Expect(3) = 9e-040
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 375 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 479
Score = 35.4 bits (71), Expect(3) = 9e-040
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1 / +3
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYAL 651
V+ +SS A + ++ ++ +DET +SS +CEK WY L
Sbjct: 453 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVL 581
>gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23e18 5', mRNA sequence
Length = 584
Score = 122 bits (262), Expect(3) = 9e-040
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 111 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 290
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 291 EGTFDAAIAGCDCVFHTASP 350
Score = 44.1 bits (90), Expect(3) = 9e-040
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 375 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 479
Score = 35.4 bits (71), Expect(3) = 9e-040
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1 / +3
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYAL 651
V+ +SS A + ++ ++ +DET +SS +CEK WY L
Sbjct: 453 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVL 581
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 136 bits (292), Expect(2) = 2e-039
Identities = 61/131 (46%), Positives = 83/131 (63%)
Frame = -1 / +1
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A A + VCVTGA GFVASWL+K LL ++ V + K AHL L GA ERLQ+
Sbjct: 58 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 237
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPF 792
+ ADLL+ S SAV CEGVFH ASPV + + +E+ + PAV GTLNVL++C +
Sbjct: 238 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKV 417
Query: 791 LKRVVLTSSSS 759
+ V+++S ++
Sbjct: 418 KRVVIVSSCAA 450
Score = 46.9 bits (96), Expect(2) = 2e-039
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1 / +1
Query: 707 ETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGP 558
E +WS LC K WY L + G+D+V +LPS V+GP
Sbjct: 493 EDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGP 642
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 136 bits (292), Expect(2) = 2e-039
Identities = 61/131 (46%), Positives = 83/131 (63%)
Frame = -1 / +1
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A A + VCVTGA GFVASWL+K LL ++ V + K AHL L GA ERLQ+
Sbjct: 31 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 210
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPF 792
+ ADLL+ S SAV CEGVFH ASPV + + +E+ + PAV GTLNVL++C +
Sbjct: 211 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKV 390
Query: 791 LKRVVLTSSSS 759
+ V+++S ++
Sbjct: 391 KRVVIVSSCAA 423
Score = 46.9 bits (96), Expect(2) = 2e-039
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1 / +1
Query: 707 ETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGP 558
E +WS LC K WY L + G+D+V +LPS V+GP
Sbjct: 466 EDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGP 615
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 136 bits (292), Expect(2) = 2e-039
Identities = 61/131 (46%), Positives = 83/131 (63%)
Frame = -1 / +1
Query: 1151 ARASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQI 972
A A + VCVTGA GFVASWL+K LL ++ V + K AHL L GA ERLQ+
Sbjct: 49 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 228
Query: 971 VRADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPF 792
+ ADLL+ S SAV CEGVFH ASPV + + +E+ + PAV GTLNVL++C +
Sbjct: 229 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKV 408
Query: 791 LKRVVLTSSSS 759
+ V+++S ++
Sbjct: 409 KRVVIVSSCAA 441
Score = 46.9 bits (96), Expect(2) = 2e-039
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1 / +1
Query: 707 ETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGP 558
E +WS LC K WY L + G+D+V +LPS V+GP
Sbjct: 484 EDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGP 633
>gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. vulgare cDNA clone HA07C19
5-PRIME, mRNA sequence
Length = 579
Score = 122 bits (262), Expect(3) = 2e-039
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 110 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 289
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 290 EGTFDAAIAGCDCVFHTASP 349
Score = 44.1 bits (90), Expect(3) = 2e-039
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 374 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 478
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWY 657
V+ +SS A + ++ ++ +DET +SS +CEK WY
Sbjct: 452 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 574
>gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. vulgare cDNA clone HF11K09
5-PRIME, mRNA sequence
Length = 571
Score = 122 bits (262), Expect(3) = 2e-039
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 104 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 283
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 284 EGTFDAAIAGCDCVFHTASP 343
Score = 44.1 bits (90), Expect(3) = 2e-039
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 368 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 472
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWY 657
V+ +SS A + ++ ++ +DET +SS +CEK WY
Sbjct: 446 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 568
>gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. vulgare cDNA clone HS04D07
5-PRIME, mRNA sequence
Length = 563
Score = 122 bits (262), Expect(3) = 2e-039
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 94 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 273
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 274 EGTFDAAIAGCDCVFHTASP 333
Score = 44.1 bits (90), Expect(3) = 2e-039
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 358 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 462
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWY 657
V+ +SS A + ++ ++ +DET +SS +CEK WY
Sbjct: 436 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 558
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 135 bits (289), Expect(2) = 4e-039
Identities = 60/129 (46%), Positives = 82/129 (63%)
Frame = -1 / +2
Query: 1145 ASKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVR 966
A + VCVTGA GFVASWL+K LL ++ V + K AHL L GA ERLQ++
Sbjct: 2 AKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLS 181
Query: 965 ADLLEEGSFDSAVMACEGVFHTASPVLAKPDSTSKEDTLVPAVNGTLNVLRSCKKNPFLK 786
ADLL+ S SAV CEGVFH ASPV + + +E+ + PAV GTLNVL++C + +
Sbjct: 182 ADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKR 361
Query: 785 RVVLTSSSS 759
V+++S ++
Sbjct: 362 VVIVSSCAA 388
Score = 46.9 bits (96), Expect(2) = 4e-039
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1 / +2
Query: 707 ETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGP 558
E +WS LC K WY L + G+D+V +LPS V+GP
Sbjct: 431 EDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGP 580
>gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0014A07f, mRNA sequence
Length = 697
Score = 127 bits (271), Expect(3) = 4e-039
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 42 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 221
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 222 DLSEDGSFNEAIAGCTGVFHVATPM 296
Score = 79.9 bits (168), Expect(3) = 8e-022
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -1
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 292 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 113
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 112 WRSFMTSHDPTKPDAPVTTTGPL 44
Score = 42.8 bits (87), Expect(3) = 4e-039
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 318 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 440
Score = 38.6 bits (78), Expect(3) = 8e-022
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / -1
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
GP T+ G + +S PFSLA S AAFSA L Y
Sbjct: 619 GPTTSVGMMLMKSRPFSLAYSMAAFSARALDTKY 518
Score = 35.0 bits (70), Expect(3) = 4e-039
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +3
Query: 605 NGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARF 486
NG+D ++++P+ V+GP L+ + + L L G+ A +
Sbjct: 573 NGLDFISIIPTLVVGPFLNAGMPPSLVTALALITGNEAHY 692
Score = 23.1 bits (44), Expect(3) = 8e-022
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -3
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 461 VVGWPRPLLDVDAAGGGGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 318
>gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0009D15f, mRNA sequence
Length = 961
Score = 127 bits (271), Expect(3) = 8e-039
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 47 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 226
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 227 DLSEDGSFNEAIAGCTGVFHVATPM 301
Score = 42.8 bits (87), Expect(3) = 8e-039
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 323 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 445
Score = 35.0 bits (70), Expect(3) = 8e-039
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1 / +3
Query: 605 NGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGD 498
NG+D ++++P+ V+GP LS + + L L G+
Sbjct: 579 NGLDFISIIPTLVVGPFLSAGMPASLVTALALITGE 686
>gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. vulgare cDNA clone HB24O01
5-PRIME, mRNA sequence
Length = 478
Score = 120 bits (257), Expect(3) = 1e-038
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = -1 / +3
Query: 1133 KVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLL 954
+VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LL
Sbjct: 9 RVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLL 188
Query: 953 EEGSFDSAVMACEGVFHTASP 891
EEG+ D+A+ C+ VFHTASP
Sbjct: 189 EEGTXDAAIAGCDCVFHTASP 251
Score = 44.1 bits (90), Expect(3) = 1e-038
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 276 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 380
Score = 34.1 bits (68), Expect(3) = 1e-038
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1 / +3
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWY 657
V+ +SS A + ++ ++ +DET +SS +CEK WY
Sbjct: 354 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 476
>gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005O08f, mRNA sequence
Length = 949
Score = 118 bits (252), Expect(3) = 2e-038
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = -1 / +3
Query: 1127 CVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLEE 948
CVTG +GF+AS LI+ LL +G+ V TVRDP + K LW+L GA ERLQ++RADLL E
Sbjct: 24 CVTGGTGFIASHLIRALLAAGHTVRATVRDPSDEAKVGFLWELEGADERLQLLRADLLVE 203
Query: 947 GSFDSAVMACEGVFHTASPVL 885
GSFD+AV +GVFH ASPV+
Sbjct: 204 GSFDAAVSGVDGVFHAASPVV 266
Score = 51.9 bits (107), Expect(3) = 2e-038
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -1 / +3
Query: 716 SLDETTWSSVPLCEKMHLWYALXXXXXXXXXXXXXXENGIDLVTVLPSFVIGPSL 552
+L+E+ WS C LWYA E+G+DLV V PSFVIGP L
Sbjct: 438 TLNESHWSDADYCRTYGLWYAYAKTVAEKEAWRLATEHGLDLVVVNPSFVIGPVL 602
Score = 27.6 bits (54), Expect(3) = 2e-038
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 866 SKEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSS 762
++E + P V G NVLRSC + R V+ +SS
Sbjct: 291 AQEKLVDPIVKGAGNVLRSCARAAVPPRRVVFTSS 395
>gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0023C20f, mRNA sequence
Length = 843
Score = 127 bits (271), Expect(3) = 3e-038
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 38 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 217
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 218 DLSEDGSFNEAIAGCTGVFHVATPM 292
Score = 79.9 bits (168), Expect(3) = 8e-022
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -1
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 288 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 109
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 108 WRSFMTSHDPTKPDAPVTTTGPL 40
Score = 42.8 bits (87), Expect(3) = 3e-038
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 314 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 436
Score = 38.6 bits (78), Expect(3) = 8e-022
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / -1
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
GP T+ G + +S PFSLA S AAFSA L Y
Sbjct: 615 GPTTSVGMMLMKSRPFSLAYSMAAFSARALDTKY 514
Score = 32.7 bits (65), Expect(3) = 3e-038
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIGPSLSHELCVTASDVLGLFQGDTARFS 483
NG+D ++++P+ V+GP LS + L L G+ +S
Sbjct: 569 NGLDFISIIPTLVVGPFLSAGMPPRLVTGLSLNTGNETHYS 691
Score = 23.1 bits (44), Expect(3) = 8e-022
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -3
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 457 VVGWPRPLLDVDAAGGGGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 314
>gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D1710 5-PRIME, mRNA sequence
Length = 683
Score = 127 bits (271), Expect(3) = 4e-038
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 47 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 226
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 227 DLSEDGSFNEAIAGCTGVFHVATPM 301
Score = 79.9 bits (168), Expect(3) = 8e-022
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 297 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 118
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 117 WRSFMTSHDPTKPDAPVTTTGPL 49
Score = 42.8 bits (87), Expect(3) = 4e-038
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 323 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 445
Score = 38.6 bits (78), Expect(3) = 8e-022
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / -3
Query: 559 GPITNDGRTVTRSMPFSLANSHAAFSANTLARAY 660
GP T+ G + +S PFSLA S AAFSA L Y
Sbjct: 624 GPTTSVGMMLMKSRPFSLAYSMAAFSARALDTKY 523
Score = 31.8 bits (63), Expect(3) = 4e-038
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIGPSLS 549
NG+D ++++P+ V+GP LS
Sbjct: 578 NGLDFISIIPTLVVGPFLS 634
Score = 23.1 bits (44), Expect(3) = 8e-022
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -2
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 466 VVGWPRPLLDVDTAGGGGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 323
>gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0002I16f, mRNA sequence
Length = 609
Score = 122 bits (262), Expect(3) = 2e-037
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 91 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 270
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 271 EGTFDAAIAGCDCVFHTASP 330
Score = 44.1 bits (90), Expect(3) = 2e-037
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 355 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 459
Score = 27.6 bits (54), Expect(3) = 2e-037
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1 / +1
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEK 672
V+ +SS A + ++ ++ +DET +SS +CEK
Sbjct: 433 VIVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEK 540
>gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0092C06f, mRNA sequence
Length = 941
Score = 122 bits (262), Expect(3) = 3e-037
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 143 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 322
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 323 EGTFDAAIAGCDCVFHTASP 382
Score = 44.1 bits (90), Expect(3) = 3e-037
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 407 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 511
Score = 27.2 bits (53), Expect(3) = 3e-037
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKM 669
V+ +SS A ++ ++ +DET +SS +CEK+
Sbjct: 485 VIVTSSMAAVXLHGKPRTPDVVVDETWFSSAEVCEKI 595
>gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0085O04f, mRNA sequence
Length = 842
Score = 127 bits (271), Expect(3) = 4e-037
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 50 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 229
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 230 DLSEDGSFNEAIAGCTGVFHVATPM 304
Score = 79.9 bits (168), Expect(3) = 5e-021
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 300 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 121
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 120 WRSFMTSHDPTKPDAPVTTTGPL 52
Score = 42.8 bits (87), Expect(3) = 4e-037
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 326 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 448
Score = 35.9 bits (72), Expect(3) = 5e-021
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3 / -2
Query: 552 QTGPDHERREDSHKVDAVLLGELPRRFLCKYLG 650
+ G D ER D++KV AVL G L FLC+ G
Sbjct: 634 RNGADDERGNDANKVQAVLAGVLHGGFLCQGFG 536
Score = 29.0 bits (57), Expect(3) = 4e-037
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIGP 558
NG+D ++++P+ V+GP
Sbjct: 581 NGLDFISIIPTLVVGP 628
Score = 23.1 bits (44), Expect(3) = 5e-021
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -2
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 469 VVGWPRPLLDVDAAGGGGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 326
>gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0095O05f, mRNA sequence
Length = 717
Score = 127 bits (271), Expect(3) = 2e-036
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +1
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 49 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 228
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 229 DLSEDGSFNEAIAGCTGVFHVATPM 303
Score = 42.8 bits (87), Expect(3) = 2e-036
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 325 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 447
Score = 25.8 bits (50), Expect(3) = 2e-036
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2 / +2
Query: 409 RPPGGTCAAQWCWTTTSWSPRSRNATRYSP 320
R P + A+ WT+++ SPRS +A +P
Sbjct: 551 RRPPWSTPARTAWTSSASSPRSSSARFSTP 640
>gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0003A18f, mRNA sequence
Length = 900
Score = 127 bits (273), Expect(2) = 3e-036
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +1
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 46 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKQLLELPGAKERLSIWKA 225
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 226 DLSEDGSFNEAIAGCTGVFHVATPM 300
Score = 44.6 bits (91), Expect(2) = 3e-036
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+VLTSS+ +V I +
Sbjct: 322 ENEVIKPTVEGMLSIMRACKEAGTVKRIVLTSSAGSVNIEE 444
>gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0023N15f, mRNA sequence
Length = 678
Score = 113 bits (241), Expect(3) = 4e-036
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = -1 / +2
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWLIK +L Y V TVRD + +KT HL L AKERL + +A LLE
Sbjct: 113 VCVTGASGYIASWLIKGVLGRXYTVRATVRDTDDPKKTLHLQALEVAKERLHLFKASLLE 292
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 293 EGTFDAAIAGCDCVFHTASP 352
Score = 44.1 bits (90), Expect(3) = 4e-036
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 377 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 481
Score = 32.7 bits (65), Expect(3) = 4e-036
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1 / +2
Query: 779 VLTSSSSAVRIRDDGGQSSNISLDETTWSSVPLCEKMHLWYAL 651
V+ +SS A + ++ ++ +DET +SS +CEK WY L
Sbjct: 455 VIVTSSMAAVAYNGRPKTPDVVIDETWFSSGRVCEKR*HWYVL 583
>gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. vulgare cDNA clone HA02P13
5-PRIME, mRNA sequence
Length = 622
Score = 127 bits (271), Expect(3) = 1e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 51 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 230
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 231 DLSEDGSFNEAIAGCTGVFHVATPM 305
Score = 42.8 bits (87), Expect(3) = 1e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 327 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 449
Score = 23.1 bits (44), Expect(3) = 1e-035
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 409 RPPGGTCAAQWCWTTTSWSPRS 344
R P + A+ WT+++ SPRS
Sbjct: 553 RRPPWSTPARTAWTSSASSPRS 618
>gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0003J21f, mRNA sequence
Length = 625
Score = 127 bits (271), Expect(3) = 1e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 51 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 230
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 231 DLSEDGSFNEAIAGCTGVFHVATPM 305
Score = 42.8 bits (87), Expect(3) = 1e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 327 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 449
Score = 22.6 bits (43), Expect(3) = 1e-035
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIG 561
NG+ ++++P+ V+G
Sbjct: 581 NGLXFISIIPTLVVG 625
>gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0002H01f, mRNA sequence
Length = 895
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 50 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 229
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 230 DLSEDGSFNEAIAGCTGVFHVATPM 304
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 326 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 448
>gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07O14V 5',
mRNA sequence
Length = 700
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 41 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 220
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 221 DLSEDGSFNEAIAGCTGVFHVATPM 295
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 317 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 439
>gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C149 5-PRIME, mRNA sequence
Length = 679
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 56 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 235
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 236 DLSEDGSFNEAIAGCTGVFHVATPM 310
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 332 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 454
>gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005F01f, mRNA sequence
Length = 657
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +1
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 28 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 207
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 208 DLSEDGSFNEAIAGCTGVFHVATPM 282
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 304 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 426
>gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_G09 5', mRNA sequence
Length = 575
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +1
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 46 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 225
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 226 DLSEDGSFNEAIAGCTGVFHVATPM 300
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 322 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 444
>gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_J03 5', mRNA sequence
Length = 558
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 59 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 238
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 239 DLSEDGSFNEAIAGCTGVFHVATPM 313
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 335 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 457
>gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_A12 5', mRNA sequence
Length = 532
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +1
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 46 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 225
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 226 DLSEDGSFNEAIAGCTGVFHVATPM 300
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 322 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 444
>gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0100J05f, mRNA sequence
Length = 519
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 53 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 232
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 233 DLSEDGSFNEAIAGCTGVFHVATPM 307
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 329 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 451
>gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_O16 5', mRNA sequence
Length = 504
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 18 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 197
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 198 DLSEDGSFNEAIAGCTGVFHVATPM 272
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 294 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 416
>gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0095D03f, mRNA sequence
Length = 502
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 38 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 217
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 218 DLSEDGSFNEAIAGCTGVFHVATPM 292
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 314 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 436
>gb|BG418507.1|BG418507 HVSMEk0022O17f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0022O17f, mRNA sequence
Length = 494
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 50 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 229
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 230 DLSEDGSFNEAIAGCTGVFHVATPM 304
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 326 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 448
>gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_M01 5', mRNA sequence
Length = 468
Score = 127 bits (271), Expect(2) = 2e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 12 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 191
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 192 DLSEDGSFNEAIAGCTGVFHVATPM 266
Score = 42.8 bits (87), Expect(2) = 2e-035
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I +
Sbjct: 288 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEE 410
>gb|BG415421.2|BG415421 HVSMEk0006G24f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0006G24f, mRNA sequence
Length = 640
Score = 125 bits (268), Expect(3) = 4e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 51 NKGPVVVTGASGFVWSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 230
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 231 DLSEDGSFNEAIAGCTGVFHVATPM 305
Score = 35.4 bits (71), Expect(3) = 4e-035
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ D + P V G L+++R+C + +KR+V T + +V I +
Sbjct: 327 ENDVIKPTVEGMLSIMRACIEARTVKRIVFTFYAGSVNIEE 449
Score = 29.9 bits (59), Expect(3) = 4e-035
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIGPSLS 549
NG++L+ ++P+ V+GP L+
Sbjct: 581 NGLELINIIPTLVVGPFLN 637
>gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0007B19f, mRNA sequence
Length = 653
Score = 122 bits (260), Expect(3) = 8e-035
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = -1 / +3
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+K V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 51 NKWPVVVTGASGFVWSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 230
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 231 DLSEDGSFNEAIAGCTGVFHVATPM 305
Score = 41.4 bits (84), Expect(3) = 8e-035
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRI 747
+ + + P V G L+++R+CK+ +KR+V TSS+ +V I
Sbjct: 327 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSACSVNI 443
Score = 26.7 bits (52), Expect(3) = 8e-035
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1 / +2
Query: 605 NGIDLVTVLPSFVIGPSLS 549
NG+ +++ P+ V+GP LS
Sbjct: 584 NGLXFISLFPTLVVGPFLS 640
>gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0021F02f, mRNA sequence
Length = 671
Score = 127 bits (271), Expect(3) = 8e-035
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -1 / +2
Query: 1142 SKGKVCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRA 963
+KG V VTGASGFV SWL+ +LL++GY V TVRDP N +KT L +LPGAKERL I +A
Sbjct: 38 NKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKA 217
Query: 962 DLLEEGSFDSAVMACEGVFHTASPV 888
DL E+GSF+ A+ C GVFH A+P+
Sbjct: 218 DLSEDGSFNEAIAGCTGVFHVATPM 292
Score = 79.9 bits (168), Expect(3) = 3e-021
Identities = 43/83 (51%), Positives = 48/83 (57%)
Frame = +1 / -3
Query: 892 GDAVWNTPSQAITALSKLPSSNRSARTICSLSLAPGNFQRWAVFW*FPGSLTVPTT*YPD 1071
G A W TP Q A KLPSS RSA + S SLAPG+ VF GS TV T YP
Sbjct: 288 GVATWKTPVQPAMASLKLPSSLRSAFQMDSRSLAPGSSSNGFVFSTLAGSRTVARTVYPA 109
Query: 1072 SRSRLISQEATKPEAPVTHTLPL 1140
RS + S + TKP+APVT T PL
Sbjct: 108 WRSFMTSHDPTKPDAPVTTTGPL 40
Score = 40.0 bits (81), Expect(3) = 8e-035
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -1 / +2
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSSAVRIRD 741
+ + + P V G L+++R+CK+ +KR+V T S+ +V I +
Sbjct: 314 ENEVIKPTVEGMLSIMRACKEAGTVKRIVFTFSAGSVNIEE 436
Score = 36.8 bits (74), Expect(3) = 3e-021
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / -2
Query: 552 QTGPDHERREDSHKVDAVLLGELPRRFLCKYLG 650
+ GPD ER +D+ +V AVL G L LC+ LG
Sbjct: 622 RNGPDDERGDDADEVQAVLAGVLHGGLLCQGLG 524
Score = 23.1 bits (44), Expect(3) = 8e-035
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 409 RPPGGTCAAQWCWTTTSWSPRS 344
R P + A+ WT+++ SPRS
Sbjct: 540 RRPPWSTPARTAWTSSASSPRS 605
Score = 23.1 bits (44), Expect(3) = 3e-021
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3 / -2
Query: 720 VTGLATVVPDPHXXXXXXKDDPFQERVLLARSQHVQSTVHRRDERVLL 863
V G + D +DD F LLA Q HRR + ++L
Sbjct: 457 VVGWPRPLLDVDAAGGEGEDDAFHGAGLLACPHDAQHPFHRRLDHLVL 314
>gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14G15
5-PRIME, mRNA sequence
Length = 568
Score = 122 bits (262), Expect(2) = 1e-034
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +1
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 124 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 303
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 304 EGTFDAAIAGCDCVFHTASP 363
Score = 44.1 bits (90), Expect(2) = 1e-034
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +1
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 388 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 492
>gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. vulgare cDNA clone HA08A23
5-PRIME, mRNA sequence
Length = 497
Score = 122 bits (262), Expect(2) = 1e-034
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = -1 / +3
Query: 1130 VCVTGASGFVASWLIKRLLESGYHVVGTVRDPGNHQKTAHLWKLPGAKERLQIVRADLLE 951
VCVTGASG++ASWL+K LL GY V TVRD + +KT HL L GAKERL + +A LLE
Sbjct: 129 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 308
Query: 950 EGSFDSAVMACEGVFHTASP 891
EG+FD+A+ C+ VFHTASP
Sbjct: 309 EGTFDAAIAGCDCVFHTASP 368
Score = 44.1 bits (90), Expect(2) = 1e-034
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / +3
Query: 863 KEDTLVPAVNGTLNVLRSCKKNPFLKRVVLTSSSS 759
K + L PAVNGTLNVLRSCKK + +V +S ++
Sbjct: 393 KAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAA 497
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 592,403,295
Number of Sequences: 312970
Number of extensions: 10737687
Number of successful extensions: 127694
Number of sequences better than 1.0e-020: 230
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13874535308
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)