TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485944.3.1
(991 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ447037.1|BJ447037 BJ447037 K. Sato unpublished cDNA li... 388 e-107
gb|BJ449238.1|BJ449238 BJ449238 K. Sato unpublished cDNA li... 388 e-107
gb|AV926512.1|AV926512 AV926512 K. Sato unpublished cDNA li... 379 e-104
gb|CA025182.1|CA025182 HZ51H02r HZ Hordeum vulgare subsp. v... 322 2e-087
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 304 4e-082
gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedl... 298 3e-080
gb|CA025064.1|CA025064 HZ51B21r HZ Hordeum vulgare subsp. v... 287 5e-077
gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedl... 266 2e-070
gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots... 123 2e-069
gb|AL506332.1|AL506332 AL506332 Hordeum vulgare Barke devel... 253 1e-066
gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. v... 249 1e-065
gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgar... 193 2e-061
gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, dro... 236 2e-061
gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedl... 234 7e-061
gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedl... 232 2e-060
gb|BJ465038.1|BJ465038 BJ465038 K. Sato unpublished cDNA li... 150 3e-059
gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedl... 227 8e-059
gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. v... 227 8e-059
gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots... 226 2e-058
gb|BI956152.1|BI956152 HVSMEm0025N07f Hordeum vulgare green... 225 4e-058
gb|BF259036.2|BF259036 HVSMEf0017H13f Hordeum vulgare seedl... 220 9e-057
gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiol... 218 3e-056
gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, sal... 215 3e-055
gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedl... 208 4e-053
gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-a... 181 4e-053
gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green... 199 5e-053
gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedl... 199 2e-052
gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedl... 202 2e-051
gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, sal... 201 6e-051
gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hyd... 201 6e-051
gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachi... 195 4e-049
gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedl... 193 2e-048
gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA li... 178 2e-048
gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedl... 192 3e-048
gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedl... 178 2e-047
gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedl... 188 6e-047
gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedl... 187 1e-046
gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedl... 187 1e-046
gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-a... 183 1e-046
gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. v... 186 2e-046
gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedl... 185 3e-046
gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke devel... 183 1e-045
gb|CB876945.1|CB876945 HP02P10T HP Hordeum vulgare subsp. v... 183 1e-045
gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachi... 182 3e-045
gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, ... 182 4e-045
gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachi... 160 5e-045
gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. v... 180 1e-044
gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, dro... 179 2e-044
gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. v... 178 5e-044
gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. v... 178 5e-044
gb|CA020634.1|CA020634 HZ36O20r HZ Hordeum vulgare subsp. v... 178 5e-044
gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgar... 158 3e-042
gb|CA019921.1|CA019921 HV13L15r HV Hordeum vulgare subsp. v... 171 4e-042
gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedl... 171 5e-042
gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots... 122 8e-041
gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 ... 162 5e-040
gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke devel... 163 2e-039
gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. v... 162 2e-039
gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedl... 162 3e-039
gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachi... 159 3e-038
gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. v... 159 3e-038
gb|BI955158.1|BI955158 HVSMEm0021K16f Hordeum vulgare green... 156 1e-037
gb|BG299981.1|BG299981 HVSMEa0022N07f Hordeum vulgare seedl... 156 2e-037
gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. v... 155 4e-037
gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA,... 149 5e-037
gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. v... 154 7e-037
gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedl... 154 9e-037
gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. v... 151 6e-036
gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachi... 107 7e-036
gb|AJ460180.1|AJ460180 AJ460180 S00002 Hordeum vulgare subs... 150 1e-035
gb|BJ468794.1|BJ468794 BJ468794 K. Sato unpublished cDNA li... 148 4e-035
gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedl... 146 2e-034
gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. v... 143 2e-034
gb|BJ470641.1|BJ470641 BJ470641 K. Sato unpublished cDNA li... 144 1e-033
gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedl... 119 2e-033
gb|CA004275.1|CA004275 HS17B20r HS Hordeum vulgare subsp. v... 141 7e-033
gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedl... 140 9e-033
gb|BQ467644.1|BQ467644 HS04G20r HS Hordeum vulgare subsp. v... 139 2e-032
gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hyd... 138 6e-032
gb|AV931399.1|AV931399 AV931399 K. Sato unpublished cDNA li... 137 1e-031
gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedl... 134 6e-031
gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. v... 132 4e-030
gb|CA012143.1|CA012143 HT04J04r HT Hordeum vulgare subsp. v... 130 1e-029
gb|BI948497.1|BI948497 HVSMEl0009N14f Hordeum vulgare spike... 122 1e-029
gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. v... 130 1e-029
gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 ... 129 3e-029
gb|BI956586.1|BI956586 HVSMEn0004E16f Hordeum vulgare rachi... 121 8e-027
gb|CA026575.1|CA026575 HZ56E21r HZ Hordeum vulgare subsp. v... 115 5e-025
gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachi... 113 2e-024
gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke devel... 110 1e-023
gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike... 105 3e-022
>gb|BJ447037.1|BJ447037 BJ447037 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15m16 5', mRNA sequence
Length = 656
Score = 388 bits (841), Expect = e-107
Identities = 149/176 (84%), Positives = 164/176 (93%)
Frame = +3 / +3
Query: 462 VSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTY 641
VSL+I +CGVCYADV WT+N+ NDS YPLVPGHEIAGVVT+VG+DVKGFK+GDHV VGTY
Sbjct: 12 VSLRITHCGVCYADVIWTKNRHNDSVYPLVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTY 191
Query: 642 VNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLA 821
VNSCRDC+NCN L+NHC K V+TFNG+DTDGTVTKGGYS+HIVVHERYC+KIPDGYPL
Sbjct: 192 VNSCRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHIVVHERYCYKIPDGYPLE 371
Query: 822 KAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
KAAPL+CAGITVYTPM RHNMNQPGKSLGV+GLGGLGHMAVKFGKAFGLKVTV ST
Sbjct: 372 KAAPLVCAGITVYTPMTRHNMNQPGKSLGVVGLGGLGHMAVKFGKAFGLKVTVLST 539
Score = 264 bits (572), Expect(2) = 1e-073
Identities = 115/148 (77%), Positives = 123/148 (83%)
Frame = -1 / -2
Query: 904 SDFPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVS 725
SDFPGWFMLCR+IGVYTVIPA +GAAF+ G*PSGIL QY S TTM*+E PPFVTVPSVS
Sbjct: 454 SDFPGWFMLCRVIGVYTVIPAQTKGAAFSSG*PSGIL*QYRS*TTM*LEYPPFVTVPSVS 275
Query: 724 MPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTK 545
PLKV T F QW SR++LQ SQSR E TYVPT TWSP+LKPLTS PT VTTPAISCPGTK
Sbjct: 274 TPLKVKTNFEQWFSRKLLQLSQSRHELTYVPTATWSPSLKPLTSEPTSVTTPAISCPGTK 95
Query: 544 GYFESLSLFRVQATSA*QTPQYMIFSET 461
GY ESL LF VQ TSA*QTPQ +I ET
Sbjct: 94 GYTESLCLFFVQITSA*QTPQCVILKET 11
Score = 210 bits (452), Expect = 1e-053
Identities = 98/175 (56%), Positives = 126/175 (72%)
Frame = -3 / -1
Query: 986 TENCDLKTKCFTKFHSHVTQTTKTNDPK*LSRLVHVVSHHWSIHGYSSTQKRCCLRQRVA 807
T+N L++K F KFH HVTQ TKT++ K*L LVHV+S H S+H SST RC L Q VA
Sbjct: 536 TQNSHLQSKGFPKFHCHVTQPTKTDNTK*LPWLVHVMSRHRSVHSDSSTN*RCGLFQWVA 357
Query: 806 IGYFEAIPFMDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNT 627
I YF A+PFM+YNV+G++ LCDS+I IN IES N F A+V+ IAV+T+TA V IC ++
Sbjct: 356 IRYFIAVPFMNYNVTGISSLCDSTIRINTIESENKF*AVVLEEAIAVVTVTA*VDICPHS 177
Query: 626 YMVTHFKAFDICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRN 462
+MVT +A D+ TNL YNSS LMPR+ R+ +I I P N+ ITD+T+ D QRN
Sbjct: 176 HMVTQLEALDV*TNLGYNSSNLMPRD*RVHRVIVPIFCPDNIGITDTTMCDPQRN 12
Score = 122 bits (261), Expect = 3e-027
Identities = 74/147 (50%), Positives = 86/147 (58%)
Frame = +1 / +1
Query: 463 FR*RSYTVESVMQTLLGRGISSMIQNILWFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM 642
F * S+ V SVM L G+ I +M + L LGM VQ S+A WVTM + HM
Sbjct: 13 FL*GSHIVVSVMPMLSGQKIGTMTRCTL*SLGMRLLEL*PRLVQTSRASSWVTMWLWGHM 192
Query: 643 *TLAVIVRTAISL*TTIAQKQFILSMALIQMELSQRGVTPLTL*SMKGIASKYPMATLWR 822
T AV V TAI+ T AQ F LSM LI+M LSQR P+TL* M G A KY MAT W+
Sbjct: 193 STHAVTVTTAIASSRTTAQNLFSLSMVLIRMVLSQREDIPVTL*FMNGTAIKYLMATHWK 372
Query: 823 RQHLFCVLE*PCILQ*CDTT*TNLESH 903
R HL VLE C L+* D T*T+ SH
Sbjct: 373 RPHL*FVLESLCTLR*RDIT*TSQGSH 453
Score = 115 bits (245), Expect(2) = 5e-028
Identities = 59/117 (50%), Positives = 69/117 (58%)
Frame = -2 / -3
Query: 987 Y*KL*P*DQMLYQISXXXXXXXXXXXXQVTFQVGSCCVASLEYTRLFQHTEEVLPSPKGS 808
Y K P Q L QIS QVT GSC VAS E T+ FQH +V P P GS
Sbjct: 537 YSKQSPSVQRLSQISLPCDPTHQDRQHQVTSLAGSCYVASSECTQ*FQHKLKVRPFPVGS 358
Query: 807 HRVF*SNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHM 637
H+VF S+T H LQC+W+ PL*Q+H YQ H*K K +L +G YCS H+HG S HM
Sbjct: 357 HQVFYSSTVHELQCDWNILPL*QYHPYQHH*K*KQILSSGSRGSYCSCHSHGMS*HM 187
Score = 111 bits (237), Expect(3) = 3e-047
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +2 / +2
Query: 671 QYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLQNTRWLPFGEGSTSSVCWN 850
Q L R+PL K +FQW *Y W CHKG + SHCS * VLL NT WLP G+G T S+CWN
Sbjct: 221 Q*LPREPLLKICFHFQWC*YGWYCHKGRIFQSHCSS*TVLL*NT*WLPTGKGRTFSLCWN 400
Query: 851 NRVYSNDATQHEPTWKVT 904
+ V+S+DAT HEP +VT
Sbjct: 401 HCVHSDDAT*HEPAREVT 454
Score = 90.9 bits (192), Expect(3) = 3e-047
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +2 / +2
Query: 464 FAEDHILWSLLCRRCLDAE*AQ*FKISFGSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
F EDH LW LLCR LD +*AQ* + F WA*D WSCN GW R Q L +G*PC C +IC
Sbjct: 14 FFEDHTLWCLLCRCYLDKK*AQ*LGVPFSPWA*DCWSCNRGWFRRQGLQAG*PCGCGDIC 193
Score = 32.7 bits (65), Expect(2) = 1e-073
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 988 VLKTVTLRPNALPNFTA 938
VLKTVT P A PNFTA
Sbjct: 538 VLKTVTFSPKAFPNFTA 488
Score = 29.5 bits (58), Expect(2) = 5e-028
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / -3
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAK 463
AQ K +H AY S+ HNR H++*SS K
Sbjct: 108 AQGLKGTPSHCAYFLSR*HRHNRHHNV*SSKK 13
Score = 25.4 bits (49), Expect(3) = 3e-047
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 944 EIW*SIWS*GHSFQY 988
EIW S+W+ G F+Y
Sbjct: 494 EIWESLWTEGDCFEY 538
>gb|BJ449238.1|BJ449238 BJ449238 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak23a07 5', mRNA sequence
Length = 573
Score = 388 bits (841), Expect = e-107
Identities = 149/176 (84%), Positives = 164/176 (93%)
Frame = +3 / +2
Query: 462 VSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTY 641
VSL+I +CGVCYADV WT+N+ NDS YPLVPGHEIAGVVT+VG+DVKGFK+GDHV VGTY
Sbjct: 2 VSLRITHCGVCYADVIWTKNRHNDSVYPLVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTY 181
Query: 642 VNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLA 821
VNSCRDC+NCN L+NHC K V+TFNG+DTDGTVTKGGYS+HIVVHERYC+KIPDGYPL
Sbjct: 182 VNSCRDCDNCNSFLENHCSKFVFTFNGVDTDGTVTKGGYSSHIVVHERYCYKIPDGYPLE 361
Query: 822 KAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
KAAPL+CAGITVYTPM RHNMNQPGKSLGV+GLGGLGHMAVKFGKAFGLKVTV ST
Sbjct: 362 KAAPLVCAGITVYTPMTRHNMNQPGKSLGVVGLGGLGHMAVKFGKAFGLKVTVLST 529
Score = 264 bits (572), Expect(2) = 1e-073
Identities = 115/148 (77%), Positives = 123/148 (83%)
Frame = -1 / -1
Query: 904 SDFPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVS 725
SDFPGWFMLCR+IGVYTVIPA +GAAF+ G*PSGIL QY S TTM*+E PPFVTVPSVS
Sbjct: 444 SDFPGWFMLCRVIGVYTVIPAQTKGAAFSSG*PSGIL*QYRS*TTM*LEYPPFVTVPSVS 265
Query: 724 MPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTK 545
PLKV T F QW SR++LQ SQSR E TYVPT TWSP+LKPLTS PT VTTPAISCPGTK
Sbjct: 264 TPLKVKTNFEQWFSRKLLQLSQSRHELTYVPTATWSPSLKPLTSEPTSVTTPAISCPGTK 85
Query: 544 GYFESLSLFRVQATSA*QTPQYMIFSET 461
GY ESL LF VQ TSA*QTPQ +I ET
Sbjct: 84 GYTESLCLFFVQITSA*QTPQCVILKET 1
Score = 210 bits (452), Expect = 1e-053
Identities = 98/175 (56%), Positives = 126/175 (72%)
Frame = -3 / -3
Query: 986 TENCDLKTKCFTKFHSHVTQTTKTNDPK*LSRLVHVVSHHWSIHGYSSTQKRCCLRQRVA 807
T+N L++K F KFH HVTQ TKT++ K*L LVHV+S H S+H SST RC L Q VA
Sbjct: 526 TQNSHLQSKGFPKFHCHVTQPTKTDNTK*LPWLVHVMSRHRSVHSDSSTN*RCGLFQWVA 347
Query: 806 IGYFEAIPFMDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNT 627
I YF A+PFM+YNV+G++ LCDS+I IN IES N F A+V+ IAV+T+TA V IC ++
Sbjct: 346 IRYFIAVPFMNYNVTGISSLCDSTIRINTIESENKF*AVVLEEAIAVVTVTA*VDICPHS 167
Query: 626 YMVTHFKAFDICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRN 462
+MVT +A D+ TNL YNSS LMPR+ R+ +I I P N+ ITD+T+ D QRN
Sbjct: 166 HMVTQLEALDV*TNLGYNSSNLMPRD*RVHRVIVPIFCPDNIGITDTTMCDPQRN 2
Score = 122 bits (261), Expect = 3e-027
Identities = 74/147 (50%), Positives = 86/147 (58%)
Frame = +1 / +3
Query: 463 FR*RSYTVESVMQTLLGRGISSMIQNILWFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM 642
F * S+ V SVM L G+ I +M + L LGM VQ S+A WVTM + HM
Sbjct: 3 FL*GSHIVVSVMPMLSGQKIGTMTRCTL*SLGMRLLEL*PRLVQTSRASSWVTMWLWGHM 182
Query: 643 *TLAVIVRTAISL*TTIAQKQFILSMALIQMELSQRGVTPLTL*SMKGIASKYPMATLWR 822
T AV V TAI+ T AQ F LSM LI+M LSQR P+TL* M G A KY MAT W+
Sbjct: 183 STHAVTVTTAIASSRTTAQNLFSLSMVLIRMVLSQREDIPVTL*FMNGTAIKYLMATHWK 362
Query: 823 RQHLFCVLE*PCILQ*CDTT*TNLESH 903
R HL VLE C L+* D T*T+ SH
Sbjct: 363 RPHL*FVLESLCTLR*RDIT*TSQGSH 443
Score = 115 bits (245), Expect(2) = 5e-028
Identities = 59/117 (50%), Positives = 69/117 (58%)
Frame = -2 / -2
Query: 987 Y*KL*P*DQMLYQISXXXXXXXXXXXXQVTFQVGSCCVASLEYTRLFQHTEEVLPSPKGS 808
Y K P Q L QIS QVT GSC VAS E T+ FQH +V P P GS
Sbjct: 527 YSKQSPSVQRLSQISLPCDPTHQDRQHQVTSLAGSCYVASSECTQ*FQHKLKVRPFPVGS 348
Query: 807 HRVF*SNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHM 637
H+VF S+T H LQC+W+ PL*Q+H YQ H*K K +L +G YCS H+HG S HM
Sbjct: 347 HQVFYSSTVHELQCDWNILPL*QYHPYQHH*K*KQILSSGSRGSYCSCHSHGMS*HM 177
Score = 111 bits (237), Expect(3) = 3e-047
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +2 / +1
Query: 671 QYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLQNTRWLPFGEGSTSSVCWN 850
Q L R+PL K +FQW *Y W CHKG + SHCS * VLL NT WLP G+G T S+CWN
Sbjct: 211 Q*LPREPLLKICFHFQWC*YGWYCHKGRIFQSHCSS*TVLL*NT*WLPTGKGRTFSLCWN 390
Query: 851 NRVYSNDATQHEPTWKVT 904
+ V+S+DAT HEP +VT
Sbjct: 391 HCVHSDDAT*HEPAREVT 444
Score = 90.9 bits (192), Expect(3) = 3e-047
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +2 / +1
Query: 464 FAEDHILWSLLCRRCLDAE*AQ*FKISFGSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
F EDH LW LLCR LD +*AQ* + F WA*D WSCN GW R Q L +G*PC C +IC
Sbjct: 4 FFEDHTLWCLLCRCYLDKK*AQ*LGVPFSPWA*DCWSCNRGWFRRQGLQAG*PCGCGDIC 183
Score = 32.7 bits (65), Expect(2) = 1e-073
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 988 VLKTVTLRPNALPNFTA 938
VLKTVT P A PNFTA
Sbjct: 528 VLKTVTFSPKAFPNFTA 478
Score = 29.5 bits (58), Expect(2) = 5e-028
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2 / -2
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAK 463
AQ K +H AY S+ HNR H++*SS K
Sbjct: 98 AQGLKGTPSHCAYFLSR*HRHNRHHNV*SSKK 3
Score = 25.4 bits (49), Expect(3) = 3e-047
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 944 EIW*SIWS*GHSFQY 988
EIW S+W+ G F+Y
Sbjct: 484 EIWESLWTEGDCFEY 528
>gb|AV926512.1|AV926512 AV926512 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19k10 5', mRNA sequence
Length = 658
Score = 379 bits (821), Expect = e-104
Identities = 142/175 (81%), Positives = 161/175 (92%)
Frame = +3 / +2
Query: 366 SENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYP 545
+E+GNC AWAA+DPSG+LSPH+FNRR V+ DVSL+I +CGVCYADV WT+N+ NDS YP
Sbjct: 134 TESGNCSAWAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYP 313
Query: 546 LVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGI 725
LVPGHEIAGVVT+VG+DVKGFK+GDHV VGTYVNSCRDCENCN SL+NHC K V+TFNG+
Sbjct: 314 LVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTYVNSCRDCENCNSSLENHCSKFVFTFNGV 493
Query: 726 DTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQ 890
DTDGTVTKGGYS+HIVVHERYC+KIPDGYPL KAAPL+CAGITVYTPM RHNMNQ
Sbjct: 494 DTDGTVTKGGYSSHIVVHERYCYKIPDGYPLEKAAPLVCAGITVYTPMTRHNMNQ 658
Score = 298 bits (646), Expect = 2e-080
Identities = 133/174 (76%), Positives = 142/174 (81%)
Frame = -1 / -2
Query: 889 WFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV 710
WFMLCR+IGVYTVIPA +GAAF+ G*PSGIL QY S TTM*+E PPFVTVPSVS PLKV
Sbjct: 657 WFMLCRVIGVYTVIPAQTKGAAFSSG*PSGIL*QYRS*TTM*LEYPPFVTVPSVSTPLKV 478
Query: 709 *TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFES 530
T F QW SRE+LQFSQSR E TYVPT TWSP+LKPLTS PT VTTPAISCPGTKGY ES
Sbjct: 477 KTNFEQWFSRELLQFSQSRHELTYVPTATWSPSLKPLTSEPTSVTTPAISCPGTKGYTES 298
Query: 529 LSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLPFS 368
L LF VQ TSA*QTPQ +I ETS T LRLK+ GE +PEGS AAQALQLP S
Sbjct: 297 LCLFFVQITSA*QTPQCVILKETSSCRTVLRLKV*GESSPEGSFAAQALQLPLS 136
Score = 195 bits (421), Expect = 3e-049
Identities = 96/174 (55%), Positives = 120/174 (68%)
Frame = -3 / -1
Query: 890 LVHVVSHHWSIHGYSSTQKRCCLRQRVAIGYFEAIPFMDYNVSGVTPLCDSSICINAIES 711
LVHV+S H S+H SST RC L Q VAI YF A+PFM+YNV+G++ LCDS+I IN IES
Sbjct: 658 LVHVMSRHRSVHSDSSTN*RCGLFQWVAIRYFIAVPFMNYNVTGISSLCDSTIRINTIES 479
Query: 710 INCFWAMVV*RDIAVLTITARVHICSNTYMVTHFKAFDICTNLSYNSSYLMPRNQRIF*I 531
N F A+V+ IAVLT+TA V IC N++MV +A D+ TNL YNSS LMPR+ R+ +
Sbjct: 478 ENKF*AVVLEGAIAVLTVTA*VDICPNSHMVAQLEALDV*TNLGYNSSNLMPRD*RVHRV 299
Query: 530 IELIPRPSNVCITDSTVYDLQRNIAALHCSAVKTVW*ENSRRISRCPSFAVAVL 369
I I P N+ ITD+T+ D QRNI + V++V E SRRI CPS AVA L
Sbjct: 298 IVPIFCPDNISITDTTMCDPQRNIIMSYSPTVESVRGE*SRRIFCCPSTAVATL 137
Score = 148 bits (317), Expect = 6e-035
Identities = 88/174 (50%), Positives = 104/174 (59%)
Frame = +1 / +3
Query: 367 QRTATAKLGQREILLEFSHHTVLTAEQCKAAMFR*RSYTVESVMQTLLGRGISSMIQNIL 546
QR ATA LGQ++ILL++S T+ T MF * S+ V SVM L G+ I +M + L
Sbjct: 135 QRVATAVLGQQKILLDYSPLTLSTVGLYDMMMFL*GSHIVVSVMLMLSGQKIGTMTRCTL 314
Query: 547 WFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM*TLAVIVRTAISL*TTIAQKQFILSMAL 726
LGM VQ S+A W TM +L HM T AV VRTAI+ T AQ F LSM L
Sbjct: 315 *SLGMRLLEL*PRLVQTSRASSWATMWLLGHMSTHAVTVRTAIAPSRTTAQNLFSLSMVL 494
Query: 727 IQMELSQRGVTPLTL*SMKGIASKYPMATLWRRQHLFCVLE*PCILQ*CDTT*T 888
I+M LSQR P+TL* M G A KY MAT W+R HL VLE C L+* D T*T
Sbjct: 495 IRMVLSQREDIPVTL*FMNGTAIKYLMATHWKRPHL*FVLESLCTLR*RDIT*T 656
Score = 122 bits (262), Expect(3) = 3e-055
Identities = 52/92 (56%), Positives = 60/92 (65%)
Frame = +2 / +1
Query: 368 RERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISF 547
RE QLQ LGS+RSFW++L + F P CF EDH LW LLC LD +*AQ* + F
Sbjct: 136 REWQLQCLGSKRSFWTTLPSHFQP*DCTT**CFFEDHTLWCLLC*CYLDKK*AQ*LGVPF 315
Query: 548 GSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
WA*D WSCN GW R Q L +G PC CW+IC
Sbjct: 316 SPWA*DCWSCNRGWFRRQGLQAGRPCGCWDIC 411
Score = 112 bits (239), Expect(2) = 1e-037
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = -2 / -3
Query: 888 GSCCVASLEYTRLFQHTEEVLPSPKGSHRVF*SNTFHGLQCEWSNPPL*QFHLYQCH*KY 709
GSC VAS E T+ FQH +V P P GSH+VF S+T H LQC+W+ PL*Q+H YQ H*K
Sbjct: 656 GSCYVASSECTQ*FQHKLKVRPFPVGSHQVFYSSTVHELQCDWNILPL*QYHPYQHH*K* 477
Query: 708 KLLLGNGCLERYCSSHNHGKSSHM 637
K +L +G YCSSH+HG S HM
Sbjct: 476 KQILSSGSRGSYCSSHSHGMS*HM 405
Score = 108 bits (230), Expect(3) = 3e-055
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = +2 / +1
Query: 671 QYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLQNTRWLPFGEGSTSSVCWN 850
Q L R+PL K +FQW *Y W CHKG + SHCS * VLL NT WLP G+G T S+CWN
Sbjct: 439 Q*LPREPLLKICFHFQWC*YGWYCHKGRIFQSHCSS*TVLL*NT*WLPTGKGRTFSLCWN 618
Query: 851 NRVYSNDATQHEP 889
+ V+S+DAT HEP
Sbjct: 619 HCVHSDDAT*HEP 657
Score = 64.8 bits (135), Expect(2) = 1e-037
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -2 / -3
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALLCG*NCVVRELQKDLSLPKLCS 379
AQ K +H AY S+ HNR H++*SS KH G* C R +QKDL LPK CS
Sbjct: 326 AQGLKGTPSHCAYFLSR*HQHNRHHNV*SSKKHHHVVQSYG*KCEGRVVQKDLLLPKHCS 147
Query: 378 CRSL 367
C SL
Sbjct: 146 CHSL 135
Score = 23.5 bits (45), Expect(3) = 3e-055
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 353 HGC*IRERQLQ 385
HGC*IR+R+ Q
Sbjct: 115 HGC*IRDREWQ 147
>gb|CA025182.1|CA025182 HZ51H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51H02
5-PRIME, mRNA sequence
Length = 603
Score = 322 bits (697), Expect = 2e-087
Identities = 118/151 (78%), Positives = 138/151 (91%)
Frame = +3 / +1
Query: 366 SENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYP 545
+E+GNC AWAA+DPSG+LSPH+FNRR V+ DVSL+I +CGVCYADV WT+N+ NDS YP
Sbjct: 151 TESGNCSAWAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYP 330
Query: 546 LVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGI 725
LVPGHEIAGVVT+VG+DVKGFK+GDHV VGTYVNSCRDC+NCN L+NHC K V+TFNG+
Sbjct: 331 LVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTYVNSCRDCDNCNSFLENHCSKFVFTFNGV 510
Query: 726 DTDGTVTKGGYSTHIVVHERYCFKIPDGYPL 818
DTDGTVTKGGYS+H+VVHERYC+KIPDGYPL
Sbjct: 511 DTDGTVTKGGYSSHVVVHERYCYKIPDGYPL 603
Score = 247 bits (533), Expect = 9e-065
Identities = 112/149 (75%), Positives = 119/149 (79%)
Frame = -1 / -2
Query: 814 G*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYV 635
G*PSGIL QY S TT *+E PPFVTVPSVS PLKV T F QW SR++LQ SQSR E TYV
Sbjct: 599 G*PSGIL*QYRS*TTT*LEYPPFVTVPSVSTPLKVKTNFEQWFSRKLLQLSQSRHELTYV 420
Query: 634 PTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSP 455
PT TWSP+LKPLTS PT VTTPAISCPGTKGY ESL LF VQ TSA*QTPQ +I ETS
Sbjct: 419 PTATWSPSLKPLTSEPTSVTTPAISCPGTKGYTESLCLFFVQITSA*QTPQCVILKETSS 240
Query: 454 LCTALRLKLCGERTPEGSLAAQALQLPFS 368
T LRLK+CGE +PEGS AAQALQLP S
Sbjct: 239 CRTVLRLKVCGESSPEGSFAAQALQLPLS 153
Score = 165 bits (355), Expect = 3e-040
Identities = 81/150 (54%), Positives = 105/150 (70%)
Frame = -3 / -1
Query: 818 QRVAIGYFEAIPFMDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHI 639
Q VAI YF A+PFM+YNV+G++ LCDS+I IN IES N F A+V+ IAV+T+TA V I
Sbjct: 603 QWVAIRYFIAVPFMNYNVTGISSLCDSTIRINTIESENKF*AVVLEEAIAVVTVTA*VDI 424
Query: 638 CSNTYMVTHFKAFDICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNI 459
C +++MVT +A D+ TNL YNSS LMPR+ R+ +I I P N+ ITD+T+ D QRNI
Sbjct: 423 CPHSHMVTQLEALDV*TNLGYNSSNLMPRD*RVHRVIVPIFCPDNIGITDTTMCDPQRNI 244
Query: 458 AALHCSAVKTVW*ENSRRISRCPSFAVAVL 369
+ V++V E SRRI CPS AVA L
Sbjct: 243 IMSYSPTVESVRGE*SRRIFCCPSTAVATL 154
Score = 122 bits (262), Expect(3) = 8e-043
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = +2 / +3
Query: 368 RERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISF 547
RE QLQ LGS+RSFW++L F P CF EDH LW LLCR LD +*AQ* + F
Sbjct: 153 REWQLQCLGSKRSFWTTLPAHFQP*DCTT**CFFEDHTLWCLLCRCYLDKK*AQ*LGVPF 332
Query: 548 GSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
WA*D WSCN GW R Q L +G*PC C +IC
Sbjct: 333 SPWA*DCWSCNRGWFRRQGLQAG*PCGCGDIC 428
Score = 122 bits (261), Expect = 3e-027
Identities = 73/149 (48%), Positives = 87/149 (58%)
Frame = +1 / +2
Query: 367 QRTATAKLGQREILLEFSHHTVLTAEQCKAAMFR*RSYTVESVMQTLLGRGISSMIQNIL 546
QR ATA LGQ++ILL++S T+ T MF * S+ V SVM L G+ I +M + L
Sbjct: 152 QRVATAVLGQQKILLDYSPRTLSTVGLYDMMMFL*GSHIVVSVMPMLSGQKIGTMTRCTL 331
Query: 547 WFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM*TLAVIVRTAISL*TTIAQKQFILSMAL 726
LGM VQ S+A WVTM + HM T AV V TAI+ T AQ F LSM L
Sbjct: 332 *SLGMRLLEL*PRLVQTSRASSWVTMWLWGHMSTHAVTVTTAIASSRTTAQNLFSLSMVL 511
Query: 727 IQMELSQRGVTPLTL*SMKGIASKYPMAT 813
I+M LSQR P+TL* M G A KY MAT
Sbjct: 512 IRMVLSQREDIPVTL*FMNGTAIKYLMAT 598
Score = 77.1 bits (162), Expect(3) = 1e-027
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = -2 / -3
Query: 813 GSHRVF*SNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHM 637
GSH+VF S+T H LQ +W+ PL*Q+H YQ H*K K +L +G YCS H+HG S HM
Sbjct: 598 GSHQVFYSSTVHELQRDWNILPL*QYHPYQHH*K*KQILSSGSRGSYCSCHSHGMS*HM 422
Score = 66.1 bits (138), Expect(3) = 8e-043
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = +2 / +3
Query: 671 QYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLQNTRWLP 814
Q L R+PL K +FQW *Y W CHKG + S CS * VLL NT WLP
Sbjct: 456 Q*LPREPLLKICFHFQWC*YGWYCHKGRIFQSRCSS*TVLL*NT*WLP 599
Score = 65.7 bits (137), Expect(3) = 1e-027
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -2 / -3
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALLCG*NCVVRELQKDLSLPKLCS 379
AQ K +H AY S+ HNR H++*SS KH G* C R +QKDL LPK CS
Sbjct: 343 AQGLKGTPSHCAYFLSR*HRHNRHHNV*SSKKHHHVVQSYG*KCAGRVVQKDLLLPKHCS 164
Query: 378 CRSL 367
C SL
Sbjct: 163 CHSL 152
Score = 23.5 bits (45), Expect(3) = 8e-043
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 353 HGC*IRERQLQ 385
HGC*IR+R+ Q
Sbjct: 132 HGC*IRDREWQ 164
Score = 21.7 bits (41), Expect(3) = 1e-027
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2 / -3
Query: 384 CSCRSLIQQPCELNSVSIPSAPAAPRTPLNASAASR 277
C S IQQPC+ + S A +S +R
Sbjct: 163 CHSLSRIQQPCQPTKLGRGSGGAGRAAESGSSRRAR 56
>gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M03
5-PRIME, mRNA sequence
Length = 648
Score = 304 bits (659), Expect = 4e-082
Identities = 117/199 (58%), Positives = 150/199 (75%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 50 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 229
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 230 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 409
Query: 753 GYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLG 932
GYS+ +VVHER+ + PD PL K APLLCAGITVY+PM H +N PG LGV+GLGGLG
Sbjct: 410 GYSSMVVVHERFVVRFPDAMPLDKGAPLLCAGITVYSPMKYHGLNVPGLHLGVLGLGGLG 589
Query: 933 HMAVKFGKAFGLKVTVFST 989
H+AVKFGKAFG+KVTV S+
Sbjct: 590 HVAVKFGKAFGMKVTVISS 646
Score = 158 bits (340), Expect(2) = 1e-039
Identities = 82/169 (48%), Positives = 95/169 (56%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPL 716
PG F +G+YTV+PAH RGA + G SG S TT +E*PP+VTVPS S L
Sbjct: 552 PGTFSPWYFMGLYTVMPAHSRGAPLSSGMASGNRTTKRSCTTTMLE*PPWVTVPSRSTEL 373
Query: 715 KV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYF 536
V GQW S+ + Q SQ EFT PTPT SP L +T PT VT+PAISCPG GY
Sbjct: 372 *VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNLVTFLPTSVTSPAISCPGIMGYL 193
Query: 535 ESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
F + S Q PQY IF TS LR+ GER PE S AA+
Sbjct: 192 AFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASSAAR 46
Score = 25.4 bits (49), Expect(2) = 1e-039
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1 / -1
Query: 985 LKTVTLRPNALPNFTA 938
L TVT P ALPN TA
Sbjct: 642 LITVTFIPKALPNLTA 595
>gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002J16f, mRNA sequence
Length = 834
Score = 298 bits (645), Expect = 3e-080
Identities = 114/200 (57%), Positives = 153/200 (76%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 92 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 271
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 272 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 451
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGL 929
GG+S +VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N PGK LGV+GLGGL
Sbjct: 452 GGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAPGKHLGVVGLGGL 631
Query: 930 GHMAVKFGKAFGLKVTVFST 989
GHMAVKFGKAFG+ VT S+
Sbjct: 632 GHMAVKFGKAFGMTVTGISS 691
Score = 113 bits (241), Expect(3) = 1e-030
Identities = 62/119 (52%), Positives = 68/119 (57%)
Frame = -1 / -1
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG IIG+YTV PA GAA A+ SG + TT E PP+V PS S P
Sbjct: 600 FPGALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STP 421
Query: 718 LKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKG 542
L+V T Q S +LQ RQE T PTPT SPTLK LT PT VTTP ISCPGT G
Sbjct: 420 LEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTISCPGTMG 244
Score = 32.2 bits (64), Expect(3) = 1e-030
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 195 QIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 91
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 976 VTLRPNALPNFTA 938
VT+ PNALPN TA
Sbjct: 678 VTVIPNALPNLTA 640
>gb|CA025064.1|CA025064 HZ51B21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51B21
5-PRIME, mRNA sequence
Length = 564
Score = 287 bits (622), Expect = 5e-077
Identities = 106/138 (76%), Positives = 125/138 (90%)
Frame = +3 / +1
Query: 366 SENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYP 545
+E+GNC AWAA+DPSG+LSPH+FNRR V+ DVSL+I +CGVCYADV WT+N+ NDS YP
Sbjct: 151 TESGNCSAWAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYP 330
Query: 546 LVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGI 725
LVPGHEIAGVVT+VG+DVKGFK+GDHV VGTYVNSCRDC+NCN L+NHC K V+TFNG+
Sbjct: 331 LVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTYVNSCRDCDNCNSFLENHCSKFVFTFNGV 510
Query: 726 DTDGTVTKGGYSTHIVVH 779
DTDGTVTKGGYS+H+VVH
Sbjct: 511 DTDGTVTKGGYSSHVVVH 564
Score = 229 bits (495), Expect = 2e-059
Identities = 102/136 (75%), Positives = 109/136 (80%)
Frame = -1 / -2
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT *+E PPFVTVPSVS PLKV T F QW SR++LQ SQSR E TYVPT TWSP+LKPLT
Sbjct: 560 TTT*LEYPPFVTVPSVSTPLKVKTNFEQWFSRKLLQLSQSRHELTYVPTATWSPSLKPLT 381
Query: 595 SAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGER 416
S PT VTTPAISCPGTKGY ESL LF VQ TSA*QTPQ +I ETS T LRLK+CGE
Sbjct: 380 SEPTSVTTPAISCPGTKGYTESLCLFFVQITSA*QTPQCVILKETSSCRTVLRLKVCGES 201
Query: 415 TPEGSLAAQALQLPFS 368
+PEGS AAQALQLP S
Sbjct: 200 SPEGSFAAQALQLPLS 153
Score = 146 bits (313), Expect = 2e-034
Identities = 72/137 (52%), Positives = 95/137 (69%)
Frame = -3 / -1
Query: 779 MDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNTYMVTHFKAF 600
M+YNV+G++ LCDS+I IN IES N F A+V+ IAV+T+TA V IC +++MVT +A
Sbjct: 564 MNYNVTGISSLCDSTIRINTIESENKF*AVVLEEAIAVVTVTA*VDICPHSHMVTQLEAL 385
Query: 599 DICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIAALHCSAVKTVW* 420
D+ TNL YNSS LMPR+ R+ +I I P N+ ITD+T+ D QRNI + V++V
Sbjct: 384 DV*TNLGYNSSNLMPRD*RVHRVIVPIFCPDNIGITDTTMCDPQRNIIMSYSPTVESVRG 205
Query: 419 ENSRRISRCPSFAVAVL 369
E SRRI CPS AVA L
Sbjct: 204 E*SRRIFCCPSTAVATL 154
Score = 122 bits (262), Expect(3) = 6e-038
Identities = 53/92 (57%), Positives = 60/92 (65%)
Frame = +2 / +3
Query: 368 RERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISF 547
RE QLQ LGS+RSFW++L F P CF EDH LW LLCR LD +*AQ* + F
Sbjct: 153 REWQLQCLGSKRSFWTTLPAHFQP*DCTT**CFFEDHTLWCLLCRCYLDKK*AQ*LGVPF 332
Query: 548 GSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
WA*D WSCN GW R Q L +G*PC C +IC
Sbjct: 333 SPWA*DCWSCNRGWFRRQGLQAG*PCGCGDIC 428
Score = 107 bits (228), Expect = 1e-022
Identities = 65/136 (47%), Positives = 79/136 (58%)
Frame = +1 / +2
Query: 367 QRTATAKLGQREILLEFSHHTVLTAEQCKAAMFR*RSYTVESVMQTLLGRGISSMIQNIL 546
QR ATA LGQ++ILL++S T+ T MF * S+ V SVM L G+ I +M + L
Sbjct: 152 QRVATAVLGQQKILLDYSPRTLSTVGLYDMMMFL*GSHIVVSVMPMLSGQKIGTMTRCTL 331
Query: 547 WFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM*TLAVIVRTAISL*TTIAQKQFILSMAL 726
LGM VQ S+A WVTM + HM T AV V TAI+ T AQ F LSM L
Sbjct: 332 *SLGMRLLEL*PRLVQTSRASSWVTMWLWGHMSTHAVTVTTAIASSRTTAQNLFSLSMVL 511
Query: 727 IQMELSQRGVTPLTL* 774
I+M LSQR P+TL*
Sbjct: 512 IRMVLSQREDIPVTL* 559
Score = 65.7 bits (137), Expect(3) = 3e-022
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -2 / -3
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALLCG*NCVVRELQKDLSLPKLCS 379
AQ K +H AY S+ HNR H++*SS KH G* C R +QKDL LPK CS
Sbjct: 343 AQGLKGTPSHCAYFLSR*HRHNRHHNV*SSKKHHHVVQSYG*KCAGRVVQKDLLLPKHCS 164
Query: 378 CRSL 367
C SL
Sbjct: 163 CHSL 152
Score = 58.8 bits (122), Expect(3) = 3e-022
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -2 / -3
Query: 774 LQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHM 637
LQ +W+ PL*Q+H YQ H*K K +L +G YCS H+HG S HM
Sbjct: 559 LQRDWNILPL*QYHPYQHH*K*KQILSSGSRGSYCSCHSHGMS*HM 422
Score = 49.6 bits (102), Expect(3) = 6e-038
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2 / +3
Query: 671 QYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCS 775
Q L R+PL K +FQW *Y W CHKG + S CS
Sbjct: 456 Q*LPREPLLKICFHFQWC*YGWYCHKGRIFQSRCS 560
Score = 23.5 bits (45), Expect(3) = 6e-038
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 353 HGC*IRERQLQ 385
HGC*IR+R+ Q
Sbjct: 132 HGC*IRDREWQ 164
Score = 21.7 bits (41), Expect(3) = 3e-022
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2 / -3
Query: 384 CSCRSLIQQPCELNSVSIPSAPAAPRTPLNASAASR 277
C S IQQPC+ + S A +S +R
Sbjct: 163 CHSLSRIQQPCQPTKLGRGSGGAGRAAESGSSRRAR 56
>gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D12f, mRNA sequence
Length = 694
Score = 266 bits (575), Expect = 2e-070
Identities = 100/177 (56%), Positives = 133/177 (75%)
Frame = +3 / +3
Query: 459 DVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGT 638
DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI GVVT VG VK FK GD VGVG
Sbjct: 6 DVTIKVLFCGICHTDLHIVKNEWGNALYPVVPGHEIVGVVTDVGPGVKNFKAGDTVGVGY 185
Query: 639 YVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPL 818
+++SCR C +C+ DNHCP V T + +D DG T+GG+S +VV + Y ++P+G PL
Sbjct: 186 FIDSCRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPL 365
Query: 819 AKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
AAPLLCAG+TVY+PMM +N PGK LGV+GLGGLGHMAVKFGKAFG+ VTV S+
Sbjct: 366 DGAAPLLCAGVTVYSPMMEFGLNAPGKHLGVVGLGGLGHMAVKFGKAFGMTVTVISS 536
Score = 94.5 bits (200), Expect(3) = 4e-027
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = -1 / -1
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S L+V T+ GQWLS +LQ +Q R E PTPT SP LK LT
Sbjct: 322 TTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLLQLTQERHESMK*PTPTVSPALKFLT 143
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 142 PGPTSVTTPTISCPGTTG 89
Score = 36.3 bits (73), Expect(3) = 4e-027
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSG 800
PG IIG+YTV PA GAA ++G PSG
Sbjct: 442 PGALRPNSIIGLYTVTPAQSSGAAPSRGRPSG 347
Score = 28.6 bits (56), Expect(3) = 4e-027
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 985 LKTVTLRPNALPNFTA 938
L TVT+ PNALPN TA
Sbjct: 532 LITVTVIPNALPNLTA 485
>gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01P08T 5', mRNA sequence
Length = 697
Score = 123 bits (263), Expect(3) = 2e-069
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+ F+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 100 WAARDESGLLSPYXFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 279
Query: 570 GVVTQVGADVKGFKVGDHVGVG 635
GVVT VG VK FKVGD VG G
Sbjct: 280 GVVTDVGPGVKSFKVGDTVGSG 345
Score = 117 bits (251), Expect(3) = 2e-069
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +3 / +3
Query: 747 KGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGG 926
+G T +VV++ Y ++P+ LA A PLLCAG+TVY PMM++ + PGK LGV+GLGG
Sbjct: 459 RGVSQTVLVVNQDYVLRVPESLSLAGAEPLLCAGVTVYXPMMQYGLXAPGKHLGVVGLGG 638
Query: 927 LGHMAVKFGKAFGLKVTV 980
LGHM VKFGKAFG+ VTV
Sbjct: 639 LGHMVVKFGKAFGMTVTV 692
Score = 61.1 bits (127), Expect(3) = 2e-069
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3 / +2
Query: 615 GDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYS 761
G VG +V+SCR C C+ +N+C V T NG+D DG T+GG+S
Sbjct: 326 GTRWAVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFS 472
>gb|AL506332.1|AL506332 AL506332 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02M11T 5',
mRNA sequence
Length = 700
Score = 253 bits (547), Expect = 1e-066
Identities = 95/129 (73%), Positives = 112/129 (86%)
Frame = +3 / +1
Query: 366 SENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYP 545
+E+GNC AWAA+DPSG+LSPH+FNRR V+ DVSL+I +CGVCYADV WT+N+ NDS YP
Sbjct: 253 TESGNCSAWAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYP 432
Query: 546 LVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGI 725
LVPGHEIAGVVT+VG+DVKGFK+GDHV VGTYVNSCRD +NCN L+NHC K V+TFNG+
Sbjct: 433 LVPGHEIAGVVTEVGSDVKGFKLGDHVAVGTYVNSCRDXDNCNSFLENHCSKFVFTFNGV 612
Query: 726 DTDGTVTKG 752
DTDG KG
Sbjct: 613 DTDGYCHKG 639
Score = 209 bits (451), Expect = 2e-053
Identities = 93/128 (72%), Positives = 99/128 (77%)
Frame = -1 / -3
Query: 751 PFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTT 572
P PSVS PLKV T F QW SR++LQ SQSR E TYVPT TWSP+LKPLTS PT VTT
Sbjct: 638 PL*QYPSVSTPLKVKTNFEQWFSRKLLQLSQSRHELTYVPTATWSPSLKPLTSEPTSVTT 459
Query: 571 PAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
PAISCPGTKGY ESL LF VQ TSA*QTPQ +I ETS T LRLK+CGE +PEGS AA
Sbjct: 458 PAISCPGTKGYTESLCLFFVQITSA*QTPQCVILKETSSCRTVLRLKVCGESSPEGSFAA 279
Query: 391 QALQLPFS 368
QALQLP S
Sbjct: 278 QALQLPLS 255
Score = 146 bits (314), Expect(2) = 1e-035
Identities = 69/134 (51%), Positives = 79/134 (58%)
Frame = +2 / +3
Query: 368 RERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISF 547
RE QLQ LGS+RSFW++L F P CF EDH LW LLCR LD +*AQ* + F
Sbjct: 255 REWQLQCLGSKRSFWTTLPAHFQP*DCTT**CFFEDHTLWCLLCRCYLDKK*AQ*LGVPF 434
Query: 548 GSWA*DSWSCNSGWCRCQRL*SG*PCRCWNICXXXXXXXXXQYLSRQPLPKSSLYFQWH* 727
WA*D WSCN GW R Q L +G*PC C +IC Q L R+PL K +FQW *
Sbjct: 435 SPWA*DCWSCNRGWFRRQGLQAG*PCGCGDICQLMP*LXQLQ*LPREPLLKICFHFQWC* 614
Query: 728 YRWNCHKGGLLHSH 769
Y W + G SH
Sbjct: 615 YGWVLSQRGGYSSH 656
Score = 119 bits (255), Expect = 2e-026
Identities = 63/130 (48%), Positives = 82/130 (63%)
Frame = -3 / -2
Query: 758 VTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNTYMVTHFKAFDICTNLS 579
+ P I IN IES N F A+V+ IAV+ +TA V IC +++MVT +A D+ TNL
Sbjct: 645 ILPFVTVPIRINTIESENKF*AVVLEEAIAVVXVTA*VDICPHSHMVTQLEALDV*TNLG 466
Query: 578 YNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIAALHCSAVKTVW*ENSRRIS 399
YNSS LMPR+ R+ +I I P N+ ITD+T+ D QRNI + V++V E SRRI
Sbjct: 465 YNSSNLMPRD*RVHRVIVPIFCPDNIGITDTTMCDPQRNIIMSYSPTVESVRGE*SRRIF 286
Query: 398 RCPSFAVAVL 369
CPS AVA L
Sbjct: 285 CCPSTAVATL 256
Score = 23.5 bits (45), Expect(2) = 1e-035
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 353 HGC*IRERQLQ 385
HGC*IR+R+ Q
Sbjct: 234 HGC*IRDREWQ 266
>gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
5-PRIME, mRNA sequence
Length = 622
Score = 249 bits (539), Expect = 1e-065
Identities = 94/174 (54%), Positives = 130/174 (74%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 99 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 278
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 279 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 458
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGV 911
GG+S +VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N PGK LGV
Sbjct: 459 GGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAPGKHLGV 620
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 62/119 (52%), Positives = 68/119 (57%)
Frame = -1 / -1
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG IIG+YTV PA GAA A+ SG + TT E PP+V PS S P
Sbjct: 607 FPGALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STP 428
Query: 718 LKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKG 542
L+V T Q S +LQ RQE T PTPT SPTLK LT PT VTTP ISCPGT G
Sbjct: 427 LEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTISCPGTMG 251
Score = 32.2 bits (64), Expect(2) = 3e-028
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1 / -1
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 202 QIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 98
>gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N1210 5-PRIME, mRNA sequence
Length = 795
Score = 193 bits (416), Expect(2) = 2e-061
Identities = 72/137 (52%), Positives = 98/137 (71%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 182 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 361
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 362 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 541
Query: 753 GYSTHIVVHERYCFKIP 803
GYS+ VVHER+ + P
Sbjct: 542 GYSSMXVVHERFVVRFP 592
Score = 127 bits (273), Expect(2) = 2e-032
Identities = 66/131 (50%), Positives = 75/131 (57%)
Frame = -1 / -1
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
S TT +E*PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L
Sbjct: 570 SCTTXMLE*PPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNL 391
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
+T PT VT+PAISCPG GY F + S Q PQY IF TS LR+ G
Sbjct: 390 VTFLPTSVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASG 211
Query: 421 ERTPEGSLAAQ 389
ER PE S AA+
Sbjct: 210 ERRPEASSAAR 178
Score = 63.4 bits (132), Expect(2) = 2e-061
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +3 / +1
Query: 822 KAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVT 977
+A P PM +N PG LGV+GLGGL H VKFGKAFG+KVT
Sbjct: 613 RARPCCAPASPCTAPMKYPGLNVPGLHLGVLGLGGLXHFPVKFGKAFGMKVT 768
Score = 31.8 bits (63), Expect(2) = 2e-032
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 865 GVYTVIPAHRRGAAFAKG 812
G+YTV+PAH RGA + G
Sbjct: 655 GLYTVMPAHSRGAPLSSG 602
>gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_J10 5', mRNA sequence
Length = 589
Score = 236 bits (509), Expect = 2e-061
Identities = 88/166 (53%), Positives = 124/166 (74%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 88 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 267
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 268 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 447
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMN 887
GG+S +VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N
Sbjct: 448 GGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLN 585
Score = 110 bits (234), Expect(2) = 3e-027
Identities = 59/110 (53%), Positives = 65/110 (59%)
Frame = -1 / -3
Query: 871 IIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQ 692
IIG+YTV PA GAA A+ SG + TT E PP+V PS S PL+V T Q
Sbjct: 569 IIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLEVSTRVEQ 390
Query: 691 WLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKG 542
S +LQ RQE T PTPT SPTLK LT PT VTTP ISCPGT G
Sbjct: 389 *FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTISCPGTMG 240
Score = 32.2 bits (64), Expect(2) = 3e-027
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 191 QIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 87
>gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012L22f, mRNA sequence
Length = 538
Score = 234 bits (505), Expect = 7e-061
Identities = 87/161 (54%), Positives = 120/161 (74%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAA+D SGVLSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 49 WAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEWGNALYPVVPGHEIV 228
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FK GD VGVG +++SCR C +C+ DNHCP V T + +D DG T+
Sbjct: 229 GVVTDVGPGVKNFKAGDTVGVGYFIDSCRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQ 408
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMM 872
GG+S +VV + Y ++P+G PL AAPLLCAG+TVY+PMM
Sbjct: 409 GGFSDVLVVDKGYVVRVPEGLPLDGAAPLLCAGVTVYSPMM 531
Score = 94.5 bits (200), Expect(3) = 2e-028
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = -1 / -3
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S L+V T+ GQWLS +LQ +Q R E PTPT SP LK LT
Sbjct: 434 TTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLLQLTQERHESMK*PTPTVSPALKFLT 255
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 254 PGPTSVTTPTISCPGTTG 201
Score = 35.4 bits (71), Expect(3) = 2e-028
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 871 IIGVYTVIPAHRRGAAFAKG*PSG 800
IIG+YTV PA GAA ++G PSG
Sbjct: 530 IIGLYTVTPAQSSGAAPSRGRPSG 459
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQAL 383
Q PQ TS ALR KL GERTP+ S AAQ +
Sbjct: 152 QIPQKSTLIVTSSSF*ALREKL*GERTPDVSFAAQPI 42
>gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017J24f, mRNA sequence
Length = 830
Score = 232 bits (501), Expect = 2e-060
Identities = 88/192 (45%), Positives = 129/192 (67%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 97 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 276
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 277 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 456
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGL 929
GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+ + PG G +GLGG+
Sbjct: 457 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFWLMTPGLRGGNLGLGGV 636
Query: 930 GHMAVKFGKAFG 965
GHM VK+ +G
Sbjct: 637 GHMGVKWANPWG 672
Score = 93.6 bits (198), Expect(2) = 2e-025
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 401 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 222
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 221 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 99
Score = 42.8 bits (87), Expect(2) = 2e-025
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V +PSV
Sbjct: 572 GLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV 435
>gb|BJ465038.1|BJ465038 BJ465038 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37c03 5', mRNA sequence
Length = 602
Score = 150 bits (322), Expect(2) = 3e-059
Identities = 57/124 (45%), Positives = 81/124 (65%)
Frame = +3 / +2
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA + SG LSP + RR+ + DV++KI+YCG+C++D+ +N+ +++YP++P
Sbjct: 29 GKAVGLAALESSGHLSPLAITRRSTGAEDVAIKILYCGICHSDLHSIKNEWKNARYPMIP 208
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTD 734
GHEIAG VT+VG V F GD VGVG VNSC CE+C +NHCP +T+N D
Sbjct: 209 GHEIAGEVTEVGKKVTRFAAGDRVGVGCMVNSCGSCESCAKGCENHCPAMAFTYNSFDDS 388
Query: 735 GTVT 746
G+ T
Sbjct: 389 GSGT 400
Score = 99.1 bits (210), Expect(2) = 3e-059
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +3 / +2
Query: 741 VTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGL 920
VT GGYS+ +VV ER+ + P+ PL K APLLCAGIT Y+PM H +N PG L V GL
Sbjct: 407 VTYGGYSSMVVVKERFVVRFPEAMPLDKGAPLLCAGITXYSPMKHHGLNXPGLHLXVXGL 586
Query: 921 GGLGH 935
GGLGH
Sbjct: 587 GGLGH 601
Score = 95.5 bits (202), Expect(2) = 7e-025
Identities = 53/124 (42%), Positives = 61/124 (49%)
Frame = -1 / -3
Query: 745 VTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPA 566
V +P S L V GQW S+ + Q S EFT PTPT SP +T PT VT+PA
Sbjct: 399 VPLPLSSNEL*VKAIAGQWFSQPLAQLSHDPHEFTMHPTPTRSPAANLVTFLPTSVTSPA 220
Query: 565 ISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQA 386
ISCPG GY F + S PQ IF TS LR+ GER PE S AA+
Sbjct: 219 ISCPGIIGYLAFFHSFLMLCRSEWHIPQ*RIFIATSSAPVLLRVMARGERWPELSSAARP 40
Query: 385 LQLP 374
P
Sbjct: 39 TAXP 28
Score = 38.6 bits (78), Expect(2) = 7e-025
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -1 / -3
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVT 740
PG +G+Y V+PA GA + G SG S+TT +E*PP VT
Sbjct: 561 PGMLSPWCFMGLYXVMPAQSSGAPLSSGMASGNRTTKRSFTTTMLE*PP*VT 406
>gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022N15f, mRNA sequence
Length = 787
Score = 227 bits (490), Expect = 8e-059
Identities = 89/146 (60%), Positives = 111/146 (76%)
Frame = +3 / +3
Query: 552 PGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDT 731
PGHEI GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D
Sbjct: 3 PGHEIVGVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDY 182
Query: 732 DGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGV 911
DG T+GG+S +VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N PGK LGV
Sbjct: 183 DGATTQGGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAPGKHLGV 362
Query: 912 IGLGGLGHMAVKFGKAFGLKVTVFST 989
+GLGGLGHMAVKFGKAFG+ VTV S+
Sbjct: 363 VGLGGLGHMAVKFGKAFGMTVTVISS 440
Score = 108 bits (231), Expect(2) = 8e-026
Identities = 60/116 (51%), Positives = 66/116 (56%)
Frame = -1 / -1
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG IIG+YTV PA GAA A+ SG + TT E PP+V PS S P
Sbjct: 349 FPGALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STP 170
Query: 718 LKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPG 551
L+V T Q S +LQ RQE T PTPT SPTLK LT PT VTTP ISCPG
Sbjct: 169 LEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTISCPG 2
Score = 28.6 bits (56), Expect(2) = 8e-026
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 985 LKTVTLRPNALPNFTA 938
L TVT+ PNALPN TA
Sbjct: 436 LITVTVIPNALPNLTA 389
>gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
5-PRIME, mRNA sequence
Length = 622
Score = 227 bits (490), Expect = 8e-059
Identities = 84/182 (46%), Positives = 124/182 (68%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 75 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 254
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 255 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 434
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGL 929
GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+ + PG G++GLGG+
Sbjct: 435 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGV 614
Query: 930 GH 935
GH
Sbjct: 615 GH 620
Score = 93.6 bits (198), Expect(2) = 2e-025
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 379 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 200
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 199 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 77
Score = 42.8 bits (87), Expect(2) = 2e-025
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V +PSV
Sbjct: 550 GLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV 413
>gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06B04V 5', mRNA sequence
Length = 700
Score = 226 bits (487), Expect = 2e-058
Identities = 85/163 (52%), Positives = 114/163 (69%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAA D SG + P++F RR DV++K++YCG+C+ D+ + N + YP+VPGHEI
Sbjct: 122 WAAMDESGTMVPYAFKRRENGVDDVTIKVLYCGMCHTDLHFINNDWGITMYPVVPGHEIT 301
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT+VG++V GF+ GD VGVG SC DCE C+ S +N+C K T+NG+ DG++T
Sbjct: 302 GVVTKVGSNVSGFRPGDRVGVGCIAASCLDCEQCDSSQENYCDKVALTYNGVFWDGSITY 481
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRH 878
GGYS+ V H+R+ +IPD PL APLLCAGITVYTPM +H
Sbjct: 482 GGYSSMYVAHKRFVVRIPDSLPLDXXAPLLCAGITVYTPMKKH 610
Score = 129 bits (276), Expect = 3e-029
Identities = 75/165 (45%), Positives = 84/165 (50%)
Frame = -1 / -2
Query: 877 CRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAF 698
C IGVYTVIPAH GA + G SGI L T +E*PP V +PS PL V
Sbjct: 609 CFFIGVYTVIPAHSSGAXXSSGRLSGIRTTNLLCATYMLE*PP*VMLPSQKTPL*VSATL 430
Query: 697 GQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLF 518
Q S E+ SQSRQE PTPT SP KP T PT VTTP IS PGT GY
Sbjct: 429 SQ*FSWELSHCSQSRQEAAMQPTPTRSPGRKPETLEPTLVTTPVISWPGTTGYMVMPQSL 250
Query: 517 RVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQAL 383
++ S PQ TS +LRLK G P+ S+AA L
Sbjct: 249 LMKWRSVWHMPQ*STLMVTSSTPFSLRLKA*GTIVPDSSMAAHPL 115
>gb|BI956152.1|BI956152 HVSMEm0025N07f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025N07f, mRNA sequence
Length = 685
Score = 225 bits (485), Expect = 4e-058
Identities = 87/129 (67%), Positives = 103/129 (79%)
Frame = +3 / +1
Query: 366 SENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYP 545
+E+GNC AWAA+DPSG+LSPH+FNRR V+ DVSL+I +CGVCYADV WT+N+ NDS YP
Sbjct: 250 TESGNCSAWAAKDPSGLLSPHTFNRRTVRHDDVSLRITHCGVCYADVIWTKNRHNDSVYP 429
Query: 546 LVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGI 725
LVPGHEIAGVVT+VG+DVKGFK+GDHV GTYVNSCRDC+NCN L+N V G+
Sbjct: 430 LVPGHEIAGVVTEVGSDVKGFKLGDHVAGGTYVNSCRDCDNCNSFLENTAQNLVSLSMGL 609
Query: 726 DTDGTVTKG 752
DG KG
Sbjct: 610 IRDGPGPKG 636
Score = 187 bits (403), Expect = 8e-047
Identities = 86/128 (67%), Positives = 94/128 (73%)
Frame = -1 / -3
Query: 751 PFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTT 572
PF PS P++ T F SR++LQ SQSR E TYVP TWSP+LKPLTS PT VTT
Sbjct: 635 PFGPGPSRINPIESETKF*AVFSRKLLQLSQSRHELTYVPPATWSPSLKPLTSEPTSVTT 456
Query: 571 PAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
PAISCPGTKGY ESL LF VQ TSA*QTPQ +I ETS T LRLK+CGE +PEGS AA
Sbjct: 455 PAISCPGTKGYTESLCLFFVQITSA*QTPQCVILKETSSCRTVLRLKVCGESSPEGSFAA 276
Query: 391 QALQLPFS 368
QALQLP S
Sbjct: 275 QALQLPLS 252
Score = 117 bits (251), Expect(3) = 1e-029
Identities = 52/92 (56%), Positives = 59/92 (64%)
Frame = +2 / +3
Query: 368 RERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISF 547
RE QLQ LGS+RSFW++L F P CF EDH LW LLCR LD +*AQ* + F
Sbjct: 252 REWQLQCLGSKRSFWTTLPAHFQP*DCTT**CFFEDHTLWCLLCRCYLDKK*AQ*LGVPF 431
Query: 548 GSWA*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
WA*D WSCN GW R Q L +G*PC +IC
Sbjct: 432 SPWA*DCWSCNRGWFRRQGLQAG*PCGWGDIC 527
Score = 105 bits (223), Expect = 5e-022
Identities = 53/102 (51%), Positives = 68/102 (66%)
Frame = -3 / -2
Query: 674 IAVLTITARVHICSNTYMVTHFKAFDICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCI 495
IAV+T+TA V IC ++MVT +A D+ TNL YNSS LMPR+ R+ +I I P N+ I
Sbjct: 558 IAVVTVTA*VDICPPSHMVTQLEALDV*TNLGYNSSNLMPRD*RVHRVIVPIFCPDNIGI 379
Query: 494 TDSTVYDLQRNIAALHCSAVKTVW*ENSRRISRCPSFAVAVL 369
TD+T+ D QRNI + V++V E SRRI CPS AVA L
Sbjct: 378 TDTTMCDPQRNIIMSYSPTVESVRGE*SRRIFCCPSTAVATL 253
Score = 26.7 bits (52), Expect(3) = 1e-029
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 690 HCPKAVYTFNGIDT 731
HC K +TFNG+D+
Sbjct: 573 HCSKFGFTFNGVDS 614
Score = 23.5 bits (45), Expect(3) = 1e-029
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 353 HGC*IRERQLQ 385
HGC*IR+R+ Q
Sbjct: 231 HGC*IRDREWQ 263
>gb|BF259036.2|BF259036 HVSMEf0017H13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017H13f, mRNA sequence
Length = 796
Score = 220 bits (475), Expect = 9e-057
Identities = 86/153 (56%), Positives = 112/153 (73%)
Frame = +3 / +3
Query: 501 DVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNIS 680
D+ +N+ ++ YP+VPGHEI GVVT VG VK FKVGD VGVG +V+SCR C C+
Sbjct: 3 DLHIAKNEWGNALYPIVPGHEIVGVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKG 182
Query: 681 LDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVY 860
+N+C V T NG+D DG T+GG+S +VV++ Y ++P+ LA AAPLLCAG+TV
Sbjct: 183 YENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVC 362
Query: 861 TPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKA 959
+PMM++ +N PGK LGV+GLGG GHMAVKFGKA
Sbjct: 363 SPMMQYGLNAPGKHLGVVGLGGFGHMAVKFGKA 461
Score = 111 bits (236), Expect = 9e-024
Identities = 61/119 (51%), Positives = 68/119 (57%)
Frame = -1 / -1
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG IIG++TV PA GAA A+ SG + TT E PP+V PS S P
Sbjct: 400 FPGALRPYCIIGLHTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STP 221
Query: 718 LKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKG 542
L+V T Q S +LQ RQE T PTPT SPTLK LT PT VTTP ISCPGT G
Sbjct: 220 LEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTISCPGTMG 44
>gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03O12u 5', mRNA sequence
Length = 500
Score = 218 bits (471), Expect = 3e-056
Identities = 81/154 (52%), Positives = 113/154 (73%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAA+D SGVLSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 38 WAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEWGNALYPVVPGHEIV 217
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FK GD VGVG +++SCR C +C+ DNHCP V T + +D DG T+
Sbjct: 218 GVVTDVGPGVKNFKAGDTVGVGYFIDSCRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQ 397
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGI 851
GG+S +VV + Y ++P+G PL AAPLLCAG+
Sbjct: 398 GGFSDVLVVDKGYVVRVPEGLPLYGAAPLLCAGV 499
Score = 94.5 bits (200), Expect(2) = 3e-023
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = -1 / -3
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S L+V T+ GQWLS +LQ +Q R E PTPT SP LK LT
Sbjct: 423 TTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLLQLTQERHESMK*PTPTVSPALKFLT 244
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 243 PGPTSVTTPTISCPGTTG 190
Score = 34.1 bits (68), Expect(2) = 3e-023
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -1 / -3
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQAL 383
Q PQ TS ALR KL GERTP+ S AAQ +
Sbjct: 141 QIPQKSTLIVTSSSF*ALREKL*GERTPDVSFAAQPI 31
>gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_E09 5', mRNA sequence
Length = 432
Score = 215 bits (464), Expect = 3e-055
Identities = 85/142 (59%), Positives = 107/142 (75%)
Frame = +3 / +2
Query: 564 IAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTV 743
I GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG
Sbjct: 2 IVGVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGAT 181
Query: 744 TKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLG 923
T+GG+S +VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N PGK LGV+GLG
Sbjct: 182 TQGGFSDVLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAPGKHLGVVGLG 361
Query: 924 GLGHMAVKFGKAFGLKVTVFST 989
GLGHMAVKFGKAFG+ VTV S+
Sbjct: 362 GLGHMAVKFGKAFGMTVTVISS 427
Score = 96.8 bits (205), Expect(2) = 3e-022
Identities = 56/112 (50%), Positives = 62/112 (55%)
Frame = -1 / -1
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG IIG+YTV PA GAA A+ SG + TT E PP+V PS S P
Sbjct: 336 FPGALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STP 157
Query: 718 LKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAI 563
L+V T Q S +LQ RQE T PTPT SPTLK LT PT VTTP I
Sbjct: 156 LEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLTPGPTSVTTPTI 1
Score = 28.6 bits (56), Expect(2) = 3e-022
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 985 LKTVTLRPNALPNFTA 938
L TVT+ PNALPN TA
Sbjct: 423 LITVTVIPNALPNLTA 376
>gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010O10f, mRNA sequence
Length = 740
Score = 208 bits (449), Expect = 4e-053
Identities = 81/181 (44%), Positives = 118/181 (65%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 111 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 290
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 291 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 470
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGL 929
GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+ + PG G G G
Sbjct: 471 GGFASAMVVDQKFVEKIPAGLAPEQAAPLLCAGVTVYSPLKHLRLMTPGLRGGNPGPGRR 650
Query: 930 G 932
G
Sbjct: 651 G 653
Score = 93.6 bits (198), Expect(2) = 3e-026
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -2
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 415 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 236
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 235 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 113
Score = 45.1 bits (92), Expect(2) = 3e-026
Identities = 25/56 (44%), Positives = 29/56 (51%)
Frame = -1 / -2
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
PG L G+YTV PAH GAA + P+GI TTM PP V +PSV
Sbjct: 616 PGVISLKCFNGLYTVTPAHSSGAACSGASPAGIFSTNF*STTMAEAKPPCVGLPSV 449
>gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E05f, mRNA sequence
Length = 869
Score = 181 bits (389), Expect(2) = 4e-053
Identities = 68/132 (51%), Positives = 94/132 (71%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG L P + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 152 AALDASGRLFPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 331
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+ +D D TVT G
Sbjct: 332 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYKLVDRDRTVTHG 511
Query: 753 GYSTHIVVHERY 788
GYS+ +VVHER+
Sbjct: 512 GYSSMVVVHERF 547
Score = 122 bits (260), Expect(2) = 1e-030
Identities = 64/131 (48%), Positives = 74/131 (56%)
Frame = -1 / -3
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
S TT +E*PP+VTV S S L V GQW S+ + Q SQ EFT PTPT SP L
Sbjct: 540 SCTTTMLE*PPWVTVRSRSTSL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNL 361
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
+T PT VT+PAISCPG GY F + S Q PQY IF TS LR+ G
Sbjct: 360 VTFLPTSVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASG 181
Query: 421 ERTPEGSLAAQ 389
+R PE S AA+
Sbjct: 180 KRRPEASSAAR 148
Score = 47.8 bits (98), Expect(2) = 4e-053
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = +3 / +3
Query: 801 PDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVT 977
PD P K APLLCA ITVY+PM PG +L + K FG+K T
Sbjct: 561 PDAMPADKGAPLLCARITVYSPMKYTG*TVPG*TLACWDWADWANFPSSSAKPFGIKGT 737
Score = 31.8 bits (63), Expect(2) = 1e-030
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1 / -2
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSG 800
PG +G+YTV+ AH RGA + G SG
Sbjct: 655 PGTVQPVYFMGLYTVMRAHSRGAPLSAGMASG 560
>gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0002B16f, mRNA sequence
Length = 829
Score = 199 bits (428), Expect(2) = 5e-053
Identities = 76/165 (46%), Positives = 109/165 (66%)
Frame = +3 / +3
Query: 378 NCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPG 557
+C R +L + RA + DV++K+++CG+C+ D+ +N+ ++ YP+VPG
Sbjct: 153 SCPVCVLRRSDELLHVVMHDNRAHKDDDVTIKVLFCGICHTDLHIVKNEWGNALYPVVPG 332
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDG 737
HEI GVVT VG VK FK GD VGVG +++SCR C +C+ DNHCP V T + +D DG
Sbjct: 333 HEIVGVVTDVGPGVKNFKAGDTVGVGYFIDSCRSCVSCSSGHDNHCPTLVLTCSAVDYDG 512
Query: 738 TVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMM 872
T+GG+S +VV + Y ++P G PL AAPLLCAG+TVY+PM+
Sbjct: 513 ATTQGGFSDVLVVDKGYVVRVPGGLPLDGAAPLLCAGVTVYSPMI 647
Score = 94.5 bits (200), Expect(3) = 7e-025
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = -1 / -1
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S L+V T+ GQWLS +LQ +Q R E PTPT SP LK LT
Sbjct: 550 TTSTSENPPWVVAPS*STALQVRTSVGQWLSCPLLQLTQERHESMK*PTPTVSPALKFLT 371
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 370 PGPTSVTTPTISCPGTTG 317
Score = 33.1 bits (66), Expect(3) = 7e-025
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 871 IIGVYTVIPAHRRGAAFAKG*PSG 800
IIG+YTV PA GAA ++G P G
Sbjct: 646 IIGLYTVTPAQSSGAAPSRGRPPG 575
Score = 29.5 bits (58), Expect(2) = 5e-053
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 885 NQPGKSLGVIGLGGLGH 935
++ GK LGV+GLG GH
Sbjct: 658 SRAGKHLGVVGLGAFGH 708
Score = 28.6 bits (56), Expect(3) = 7e-025
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1 / -1
Query: 442 LRLKLCGERTPEGSLAAQAL 383
LR KL GERTP+ S AAQ +
Sbjct: 127 LREKL*GERTPDVSFAAQPM 68
>gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0022P19f, mRNA sequence
Length = 809
Score = 199 bits (430), Expect(2) = 2e-052
Identities = 76/161 (47%), Positives = 114/161 (70%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+ + D+ +N+ ++ YP+VPGHEI
Sbjct: 88 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGIWHTDLHIGKNEWGNALYPIVPGHEIV 267
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT V VK FKVGD VGVG +V+SCR C C+ +N+C V TFNG+D DG T+
Sbjct: 268 GVVTDVCPGVKSFKVGDTVGVGYFVDSCRSCCTCSKGYENYCSTLVLTFNGVDYDGATTQ 447
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMM 872
G+S +VV++ + ++P+ LA A P + +G+TV +P++
Sbjct: 448 WGFSDVLVVNQDFVLRVPESLSLAGAGPFVLSGVTVSSPLI 570
Score = 91.3 bits (193), Expect(2) = 7e-022
Identities = 54/110 (49%), Positives = 58/110 (52%)
Frame = -1 / -1
Query: 871 IIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQ 692
I G+ TV P G A A+ SG TT E P +V PS S PLKV T Q
Sbjct: 569 INGLDTVTPDKTNGPAPARDRLSGTRSTKSWLTTSTSEKPHWVVAPS*STPLKVSTRVEQ 390
Query: 691 WLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKG 542
S +LQ RQE T PTPT SPTLK LT T VTTP ISCPGT G
Sbjct: 389 *FSYPLLQVQHERQESTK*PTPTVSPTLKLLTPGQTSVTTPTISCPGTMG 240
Score = 32.7 bits (65), Expect(2) = 7e-022
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = -1 / -1
Query: 520 FRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
F S Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 218 FLPMCRSVCQIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 87
Score = 26.7 bits (52), Expect(2) = 2e-052
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 891 PGKSLGVIGLGGL 929
PGK+L ++GLGGL
Sbjct: 587 PGKALCIVGLGGL 625
>gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009P20f, mRNA sequence
Length = 601
Score = 202 bits (436), Expect = 2e-051
Identities = 78/159 (49%), Positives = 110/159 (69%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++ +++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 87 WAARDESGLLSPYSFSRRARKDEDVTINVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 266
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT V VK FKVGD VGVG +V+SCR C C+ +N+C V T +G+D DG+ T+
Sbjct: 267 GVVTDVEPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCCTLVLTCDGVDYDGSTTQ 446
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTP 866
G+S +VV++ Y +P+ L A PLLC G TVY P
Sbjct: 447 RGFSDVLVVNQDYVLLVPESLSLTGAGPLLCTGGTVYRP 563
>gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_L05 5', mRNA sequence
Length = 411
Score = 201 bits (433), Expect = 6e-051
Identities = 79/135 (58%), Positives = 101/135 (74%)
Frame = +3 / +3
Query: 585 VGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYST 764
VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+GG+S
Sbjct: 6 VGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSD 185
Query: 765 HIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAV 944
+VV++ Y ++P+ LA AAPLLCAG+TVY+PMM++ +N PGK LGV+GLGGLGHMAV
Sbjct: 186 VLVVNQDYVLRVPESLSLAGAAPLLCAGVTVYSPMMQYGLNAPGKHLGVVGLGGLGHMAV 365
Query: 945 KFGKAFGLKVTVFST 989
KF KAFG+ VTV S+
Sbjct: 366 KFRKAFGMTVTVISS 410
>gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_C15 5', mRNA sequence
Length = 578
Score = 201 bits (433), Expect = 6e-051
Identities = 74/160 (46%), Positives = 110/160 (68%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 98 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 277
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++V D VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 278 GEVVEVGPEVSKYRVSDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 457
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPM 869
GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+
Sbjct: 458 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPL 577
Score = 89.0 bits (188), Expect(2) = 4e-024
Identities = 48/101 (47%), Positives = 55/101 (54%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT S T LTS PT T+P SCPGT GY E+ F
Sbjct: 402 QYCSTFALHGRQSRQHPTITPTPTTSLTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 223
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 222 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 100
Score = 42.8 bits (87), Expect(2) = 4e-024
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -1 / -3
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V +PSV
Sbjct: 573 GLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV 436
>gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017C09f, mRNA sequence
Length = 670
Score = 195 bits (420), Expect = 4e-049
Identities = 72/137 (52%), Positives = 99/137 (72%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 122 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 301
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 302 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 481
Query: 753 GYSTHIVVHERYCFKIP 803
GYS+ +VVHER+ + P
Sbjct: 482 GYSSMVVVHERFVVRFP 532
Score = 125 bits (268), Expect = 3e-028
Identities = 65/131 (49%), Positives = 74/131 (56%)
Frame = -1 / -2
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
S TT +E PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L
Sbjct: 510 SCTTTMLEYPPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNL 331
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
+T PT VT+PAISCPG GY F + S Q PQY IF TS LR+ G
Sbjct: 330 VTFLPTSVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASG 151
Query: 421 ERTPEGSLAAQ 389
ER PE S AA+
Sbjct: 150 ERRPEASSAAR 118
>gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008F16f, mRNA sequence
Length = 507
Score = 193 bits (415), Expect = 2e-048
Identities = 71/139 (51%), Positives = 102/139 (73%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 87 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 266
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 267 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 446
Query: 750 GGYSTHIVVHERYCFKIPD 806
GG+S +VV++ Y ++P+
Sbjct: 447 GGFSDVLVVNQDYVLRVPE 503
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 45/78 (57%), Positives = 48/78 (61%)
Frame = -1 / -3
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S PL+V T Q S +LQ RQE T PTPT SPTLK LT
Sbjct: 472 TTSTSEKPPWVVAPS*STPLEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLT 293
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 292 PGPTSVTTPTISCPGTMG 239
Score = 32.2 bits (64), Expect(2) = 3e-021
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 190 QIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 86
>gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38b23 5', mRNA sequence
Length = 598
Score = 178 bits (383), Expect(3) = 2e-048
Identities = 66/125 (52%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 138 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 317
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 318 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 497
Query: 753 GYSTH 767
GY H
Sbjct: 498 GYLQH 512
Score = 122 bits (260), Expect = 4e-027
Identities = 62/123 (50%), Positives = 70/123 (56%)
Frame = -1 / -1
Query: 757 *PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*V 578
*PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L +T PT V
Sbjct: 502 *PPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNLVTFLPTSV 323
Query: 577 TTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSL 398
T+PAISCPG GY F + S Q PQY IF TS LR+ GER PE S
Sbjct: 322 TSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEASS 143
Query: 397 AAQ 389
AA+
Sbjct: 142 AAR 134
Score = 30.9 bits (61), Expect(3) = 2e-048
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 804 DGYPLAKAAPLLCAGI 851
D PL K APLLCAGI
Sbjct: 551 DAMPLDKGAPLLCAGI 598
Score = 22.1 bits (42), Expect(3) = 2e-048
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3 / +1
Query: 759 STHIVVHERYCFKIP 803
S+ +VVHER+ + P
Sbjct: 505 SSMVVVHERFVVRFP 549
>gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002A10f, mRNA sequence
Length = 712
Score = 192 bits (413), Expect = 3e-048
Identities = 71/132 (53%), Positives = 97/132 (73%)
Frame = +3 / +1
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 166 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 345
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 346 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 525
Query: 753 GYSTHIVVHERY 788
GYS+ +VVHER+
Sbjct: 526 GYSSMVVVHERF 561
Score = 127 bits (273), Expect = 7e-029
Identities = 66/131 (50%), Positives = 75/131 (57%)
Frame = -1 / -3
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
S TT +E*PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L
Sbjct: 554 SCTTTMLE*PPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNL 375
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
+T PT VT+PAISCPG GY F + S Q PQY IF TS LR+ G
Sbjct: 374 VTFLPTSVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASG 195
Query: 421 ERTPEGSLAAQ 389
ER PE S AA+
Sbjct: 194 ERRPEASSAAR 162
>gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016F14f, mRNA sequence
Length = 768
Score = 178 bits (384), Expect(2) = 2e-047
Identities = 67/129 (51%), Positives = 93/129 (72%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAA+D SGVLSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 151 WAAKDTSGVLSPYSFSRRAHKDDDVTIKVLFCGICHTDLHIVKNEWGNALYPVVPGHEIV 330
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FK GD VGVG +++SCR C +C+ DNHCP V T + D DG T+
Sbjct: 331 GVVTDVGPGVKNFKAGDTVGVGYFIDSCRSCVSCSSGHDNHCPTLVLTCSAADYDGATTQ 510
Query: 750 GGYSTHIVV 776
G+S +VV
Sbjct: 511 RGFSDVLVV 537
Score = 90.0 bits (190), Expect(2) = 5e-022
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1 / -2
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E P +V PS S L+V T+ GQWLS +LQ +Q R E PTPT SP LK LT
Sbjct: 536 TTSTSENPLWVVAPS*SAALQVRTSVGQWLSCPLLQLTQERHESMK*PTPTVSPALKFLT 357
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 356 PGPTSVTTPTISCPGTTG 303
Score = 34.5 bits (69), Expect(2) = 5e-022
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -1 / -2
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQAL 383
Q PQ TS ALR KL GERTP+ S AAQ +
Sbjct: 254 QIPQKSTLIVTSSSL*ALREKL*GERTPDVSFAAQPI 144
Score = 30.9 bits (61), Expect(2) = 2e-047
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 786 YCFKIPDGYPLAKAAPLLCAGI 851
Y ++P+G PL A PLL AG+
Sbjct: 546 YVVRVPEGLPLDGAEPLLLAGV 611
>gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I17f, mRNA sequence
Length = 723
Score = 188 bits (404), Expect = 6e-047
Identities = 70/153 (45%), Positives = 103/153 (67%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 101 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 280
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 281 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 460
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAG 848
GG+++ + V +++ KIP G +AAPLLCAG
Sbjct: 461 GGFASAMAVDQKFGVKIPAGLAPEQAAPLLCAG 559
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 405 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 226
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 225 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 103
Score = 33.1 bits (66), Expect(2) = 1e-022
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1 / -1
Query: 847 PAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
PAH RGAA + P+GI T M PP V +PSV
Sbjct: 558 PAHSRGAACSGASPAGIFTPNF*STAMAEAKPPCVGLPSV 439
>gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005C09f, mRNA sequence
Length = 497
Score = 187 bits (402), Expect = 1e-046
Identities = 70/133 (52%), Positives = 98/133 (73%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LSP+SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 92 WAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 271
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 272 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 451
Query: 750 GGYSTHIVVHERY 788
GG+S +VV++ Y
Sbjct: 452 GGFSDVLVVNQDY 490
Score = 89.5 bits (189), Expect(2) = 3e-021
Identities = 45/78 (57%), Positives = 48/78 (61%)
Frame = -1 / -3
Query: 775 TTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLT 596
TT E PP+V PS S PL+V T Q S +LQ RQE T PTPT SPTLK LT
Sbjct: 477 TTSTSEKPPWVVAPS*STPLEVSTRVEQ*FSYPLLQVPHERQESTK*PTPTVSPTLKLLT 298
Query: 595 SAPT*VTTPAISCPGTKG 542
PT VTTP ISCPGT G
Sbjct: 297 PGPTSVTTPTISCPGTMG 244
Score = 32.2 bits (64), Expect(2) = 3e-021
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -1 / -3
Query: 493 QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
Q PQ TS AL KL GER P+ SLAAQ
Sbjct: 195 QIPQKSTLIVTSSSFRALLEKL*GERRPDSSLAAQ 91
>gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008A03f, mRNA sequence
Length = 506
Score = 187 bits (402), Expect = 1e-046
Identities = 72/160 (45%), Positives = 104/160 (65%)
Frame = +3 / +1
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
T + + A+ ++ WAA+D SGVLSP+SF+RRA DV++K+++CG+C+ D+
Sbjct: 25 TDTHMKQASMAKGMPAIGWAAKDTSGVLSPYSFSRRAQNDHDVTIKVLFCGICHTDLHIV 204
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N+ ++ YP+VPGHEIAGV+T +G VK FK GD GVG +++SCR C N DNHC
Sbjct: 205 KNEWGNALYPVVPGHEIAGVITDIGPTVKNFKAGDTAGVGYFIDSCRSCMIWNTGHDNHC 384
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYP 815
P V T N D DG T G+S +VV + Y ++P+G P
Sbjct: 385 PTLVLT*NAADYDGATTT*GFSDVLVVDKGYVVRVPEGLP 504
>gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K10f, mRNA sequence
Length = 837
Score = 183 bits (394), Expect(2) = 1e-046
Identities = 70/168 (41%), Positives = 108/168 (64%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G L P+++ R +V LK+ YCG+C+ D+ +N L SKYP+VP HE+
Sbjct: 100 WAARDATGHLFPYTYTLRKTGPENVVLKVKYCGICHTDIHQVKNDLGASKYPMVPRHEVV 279
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 280 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 459
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQP 893
GG+++ +VV +++ KIP +AAPLLCAG Y P+ + ++P
Sbjct: 460 GGFASAMVVDQKFVVKIPRRLSPEQAAPLLCAGRDGYNPLEQLLADEP 603
Score = 23.5 bits (45), Expect(2) = 1e-046
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 906 GVIGLGGLGHMAVK 947
G +GLGG+G M +K
Sbjct: 618 GNLGLGGVGQMGLK 659
>gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
5-PRIME, mRNA sequence
Length = 554
Score = 186 bits (400), Expect = 2e-046
Identities = 69/151 (45%), Positives = 102/151 (67%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 102 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 281
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 282 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 461
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLC 842
GG+++ +VV +++ KIP G +AAPLLC
Sbjct: 462 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLC 554
Score = 93.6 bits (198), Expect(2) = 5e-021
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -2
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 406 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 227
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 226 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 104
Score = 27.6 bits (54), Expect(2) = 5e-021
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1 / -2
Query: 841 HRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
H GAA + P+GI TTM PP V +PSV
Sbjct: 553 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV 440
>gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021M09f, mRNA sequence
Length = 539
Score = 185 bits (399), Expect = 3e-046
Identities = 69/151 (45%), Positives = 102/151 (67%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 85 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLXASKYPMVPGHEVV 264
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 265 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 444
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLC 842
GG+++ +VV +++ KIP G +AAPLLC
Sbjct: 445 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLC 537
Score = 94.5 bits (200), Expect(2) = 3e-021
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 389 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAXRSFL 210
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 209 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 87
Score = 27.6 bits (54), Expect(2) = 3e-021
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1 / -1
Query: 841 HRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
H GAA + P+GI TTM PP V +PSV
Sbjct: 536 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV 423
>gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20V 5',
mRNA sequence
Length = 699
Score = 183 bits (395), Expect = 1e-045
Identities = 69/153 (45%), Positives = 102/153 (66%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 106 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 285
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 286 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 465
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAG 848
GG+++ +VV +++ KIP G +AAPLL G
Sbjct: 466 GGFASAMVVDQKFVVKIPAGLAPEQAAPLLVRG 564
>gb|CB876945.1|CB876945 HP02P10T HP Hordeum vulgare subsp. vulgare cDNA clone HP02P10
5-PRIME, mRNA sequence
Length = 587
Score = 183 bits (394), Expect = 1e-045
Identities = 74/177 (41%), Positives = 105/177 (59%)
Frame = +3 / +3
Query: 288 RLH*GEFGERPVRKESTQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVS 467
R+H G ++ S + + WAA + SG + P +F RR DV+
Sbjct: 51 RIHANGVGSGAEKERSVRFCAMEVTPNHTQAASGWAAMEASGKVVPFAFKRRENGVDDVT 230
Query: 468 LKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVN 647
+K+ YCG+C+ D+ + N + YP+VPGHEI GVVT+VG++V GF+ GD VGVG
Sbjct: 231 IKVHYCGMCHTDLHFINNDWGITMYPVVPGHEITGVVTKVGSNVSGFRPGDRVGVGCIAA 410
Query: 648 SCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPL 818
SC DC++C S +N+C K T+NGI DG+VT GGYS +V H+R+ +IPD PL
Sbjct: 411 SCLDCDHCRRSEENYCDKVALTYNGIFWDGSVTYGGYSNMLVAHKRFLVRIPDTLPL 581
Score = 105 bits (223), Expect = 5e-022
Identities = 63/146 (43%), Positives = 74/146 (50%)
Frame = -1 / -2
Query: 820 AKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFT 641
+ G SG+ + T +E*PP VT+PS MPL V Q S E Q+SQSRQE
Sbjct: 583 SSGRVSGMRTRKRLCATSMLE*PP*VTLPSQKMPL*VRATLSQ*FSSERRQWSQSRQEAA 404
Query: 640 YVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSET 461
PTPT SP LKP T PT VTTP IS PGT GY ++ S PQ T
Sbjct: 403 MQPTPTRSPGLKPETLEPTLVTTPVISWPGTTGYMVMPQSLLMKWRSVWHMPQ*CTLMVT 224
Query: 460 SPLCTALRLKLCGERTPEGSLAAQAL 383
S + RLK G P+ S+AA L
Sbjct: 223 SSTPFSRRLKAKGTTLPDASMAAHPL 146
>gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014I18f, mRNA sequence
Length = 671
Score = 182 bits (392), Expect = 3e-045
Identities = 68/157 (43%), Positives = 103/157 (65%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 103 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 282
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N I TDG T+
Sbjct: 283 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDIYTDGRPTQ 462
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVY 860
GG+++ +V+ +++ KIP G A P++ GIT +
Sbjct: 463 GGFASAMVLDQKFAGKIPAGLAPEXAGPMVSGGITEF 573
Score = 93.6 bits (198), Expect(2) = 5e-021
Identities = 49/101 (48%), Positives = 56/101 (55%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S L QSRQ T PTPT SPT LTS PT T+P SCPGT GY E+ F
Sbjct: 407 QYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFL 228
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
S Q PQY+ F+ TS LR+ + GER P SLAA
Sbjct: 227 TWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAA 105
Score = 27.6 bits (54), Expect(2) = 5e-021
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -1 / -1
Query: 856 TVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPL 716
+VIP G A + P+GIL TM PP V +PSV M L
Sbjct: 569 SVIPPLTIGPAXSGASPAGILPANF*SRTMAEAKPPCVGLPSV*MSL 429
>gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_D14 5', mRNA sequence
Length = 428
Score = 182 bits (391), Expect = 4e-045
Identities = 68/142 (47%), Positives = 98/142 (69%)
Frame = +3 / +2
Query: 519 NKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCP 698
N L SKYP+VPGHE+ G V +VG +V ++VGD VGVG V CRDC C +++ +C
Sbjct: 2 NDLGASKYPMVPGHEVVGEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCN 181
Query: 699 KAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRH 878
K +++FN + TDG T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+
Sbjct: 182 KKIWSFNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF 361
Query: 879 NMNQPGKSLGVIGLGGLGHMAV 944
+ PG G++GLGG+GHM V
Sbjct: 362 GLMTPGLRGGILGLGGVGHMGV 427
>gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A03f, mRNA sequence
Length = 663
Score = 160 bits (345), Expect(2) = 5e-045
Identities = 64/140 (45%), Positives = 86/140 (61%)
Frame = +3 / +3
Query: 315 RPVRKESTQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVC 494
RP + V ++ WAARD SGVLSP F+RRA + DV+++++YCG+C
Sbjct: 138 RPHMAIAVAKEVGAQEAAQGSAALGWAARDASGVLSPFDFSRRAXKDDDVTIRVLYCGIC 317
Query: 495 YADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCN 674
+ D+ +N+ + YP+VPGHEI GVVT VG+ V FK GD VGVG +V SCR CE C
Sbjct: 318 HTDLYTIKNEWGTAMYPVVPGHEILGVVTSVGSGVSKFKAGDTVGVGYFVGSCRSCECCG 497
Query: 675 ISLDNHCPKAVYTFNGIDTD 734
+N+C V T NGID +
Sbjct: 498 NGYENYCSGMVLTSNGIDPE 557
Score = 40.9 bits (83), Expect(2) = 5e-045
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3 / +1
Query: 747 KGGYSTHIVVHERYCFKIPDGYPLAKAAP 833
+GG+S ++V+E Y F++PD PL KAAP
Sbjct: 577 RGGFSDVMLVNEDYVFRVPDRLPLDKAAP 663
>gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
5-PRIME, mRNA sequence
Length = 558
Score = 180 bits (387), Expect = 1e-044
Identities = 67/149 (44%), Positives = 100/149 (67%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV LK+ YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 110 WAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYPMVPGHEVV 289
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V ++VGD VGVG V CRDC C +++ +C K ++++N + TDG T+
Sbjct: 290 GEVVEVGPEVSKYRVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQ 469
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPL 836
GG+++ +VV +++ KIP G +AAPL
Sbjct: 470 GGFASAMVVDQKFVVKIPAGLAPEQAAPL 556
>gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_H20 5', mRNA sequence
Length = 493
Score = 179 bits (386), Expect = 2e-044
Identities = 68/130 (52%), Positives = 95/130 (73%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+LS +SF+RRA + DV++K+++CG+C+ D+ +N+ ++ YP+VPGHEI
Sbjct: 102 WAARDESGLLSRYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPIVPGHEIV 281
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT VG VK FKVGD VGVG +V+SCR C C+ +N+C V T NG+D DG T+
Sbjct: 282 GVVTDVGPGVKSFKVGDTVGVGYFVDSCRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQ 461
Query: 750 GGYSTHIVVH 779
GG+S +VV+
Sbjct: 462 GGFSDVLVVN 491
>gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA18H11
5-PRIME, mRNA sequence
Length = 508
Score = 178 bits (383), Expect = 5e-044
Identities = 66/124 (53%), Positives = 90/124 (72%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 137 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 316
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 317 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 496
Query: 753 GYST 764
GYS+
Sbjct: 497 GYSS 508
Score = 124 bits (266), Expect = 6e-028
Identities = 63/125 (50%), Positives = 72/125 (57%)
Frame = -1 / -2
Query: 763 VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT 584
+E*PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L +T PT
Sbjct: 507 LE*PPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNLVTFLPT 328
Query: 583 *VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEG 404
VT+PAISCPG GY F + S Q PQY IF TS LR+ GER PE
Sbjct: 327 SVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEA 148
Query: 403 SLAAQ 389
S AA+
Sbjct: 147 SSAAR 133
>gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. vulgare cDNA clone HM11I22
5-PRIME, mRNA sequence
Length = 564
Score = 178 bits (383), Expect = 5e-044
Identities = 66/124 (53%), Positives = 90/124 (72%)
Frame = +3 / +2
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA D SG LSP + RR+ DV +KI+YCG+C++D+ +N ++KYP++PGHEIAG
Sbjct: 176 AALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPMIPGHEIAG 355
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
VT+VG +V FK GD VGVG VNSC+ CE+C+ +NHCP ++T+N +D DGTVT G
Sbjct: 356 EVTEVGKNVTKFKAGDRVGVGCMVNSCQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHG 535
Query: 753 GYST 764
GYS+
Sbjct: 536 GYSS 547
Score = 124 bits (266), Expect = 6e-028
Identities = 63/125 (50%), Positives = 72/125 (57%)
Frame = -1 / -1
Query: 763 VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT 584
+E*PP+VTVPS S L V GQW S+ + Q SQ EFT PTPT SP L +T PT
Sbjct: 546 LE*PPWVTVPSRSTEL*VKIMPGQWFSKPLSQLSQDWHEFTMHPTPTRSPALNLVTFLPT 367
Query: 583 *VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEG 404
VT+PAISCPG GY F + S Q PQY IF TS LR+ GER PE
Sbjct: 366 SVTSPAISCPGIMGYLAFFQSFLMLCRSEWQIPQYRIFIMTSSSPVLLRVMASGERRPEA 187
Query: 403 SLAAQ 389
S AA+
Sbjct: 186 SSAAR 172
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 467,830,948
Number of Sequences: 312970
Number of extensions: 7563426
Number of successful extensions: 55012
Number of sequences better than 1.0e-020: 120
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11662735703
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)