TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478075.2.1
(807 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U96096.1|HVU96096 Hordeum vulgare endo-1,3-beta-glucanas... 105 1e-046
gb|BM370310.2|BM370310 EBro08_SQ003_M21_R root, 3 week, dro... 105 2e-046
gb|BM444766.1|BM444766 EBem09_SQ006_G13_R embryo, 1 Day ger... 105 4e-027
gb|CA017450.1|CA017450 HV05D22r HV Hordeum vulgare subsp. v... 100 9e-026
gb|AL500833.1|AL500833 AL500833 Hordeum vulgare Barke roots... 83 2e-023
gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA li... 82 5e-023
gb|BJ460231.1|BJ460231 BJ460231 K. Sato unpublished cDNA li... 81 3e-022
gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA li... 81 3e-022
emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanas... 62 4e-022
emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D... 62 4e-022
emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucana... 62 4e-022
gb|BJ546633.1|BJ546633 BJ546633 K. Sato unpublished cDNA li... 62 4e-022
gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA li... 62 4e-022
gb|CB877858.1|CB877858 HP06G23T HP Hordeum vulgare subsp. v... 62 4e-022
gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA li... 62 4e-022
gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. v... 62 4e-022
gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. v... 62 4e-022
gb|BI950008.1|BI950008 HVSMEl0017K22f Hordeum vulgare spike... 62 6e-022
gb|CB884203.1|CB884203 HV10H06u HV Hordeum vulgare subsp. v... 64 8e-022
gb|CB884213.1|CB884213 HV14A09u HV Hordeum vulgare subsp. v... 64 8e-022
gb|BF258566.3|BF258566 HVSMEf0016B09f Hordeum vulgare seedl... 62 1e-021
gb|BI950595.1|BI950595 HVSMEl0021J13f Hordeum vulgare spike... 62 1e-021
gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA li... 78 2e-021
gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA li... 78 2e-021
gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA li... 78 2e-021
gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA li... 78 2e-021
gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA li... 78 2e-021
gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 70 4e-021
emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-... 70 5e-021
gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 70 5e-021
gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 ... 70 5e-021
gb|BG415255.2|BG415255 HVSMEk0005L24f Hordeum vulgare testa... 60 7e-021
gb|BI950007.1|BI950007 HVSMEl0017K20f Hordeum vulgare spike... 62 9e-021
>gb|U96096.1|HVU96096 Hordeum vulgare endo-1,3-beta-glucanase (Hv34) gene, partial cds
Length = 2899
Score = 105 bits (225), Expect(2) = 1e-046
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3 / +1
Query: 441 GTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
GTPRRPGKA+ETYLFAMFNEN K EG EQHFGLFQPDMS VY VDF +GS
Sbjct: 2539 GTPRRPGKAVETYLFAMFNENQKPEGTEQHFGLFQPDMSAVYPVDFASGS 2688
Score = 100 bits (214), Expect(2) = 1e-046
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +3 / +1
Query: 195 SGSVGPTQPGAGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAG 374
+GS + ++VTDGG VYTNMFDAI+DA HAAVEKAG QGLELVVSETGWPS G
Sbjct: 2284 AGSSSSSATSKVKVASVTDGGLVYTNMFDAILDAAHAAVEKAGAQGLELVVSETGWPSGG 2463
Query: 375 G 377
G
Sbjct: 2464 G 2466
Score = 100 bits (214), Expect(2) = 1e-041
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = -3 / -3
Query: 424 TTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSV 245
T LL AA + PP DG PVSDTTSSSPC PAFSTAAC AS IASNMLVYT+PPSV
Sbjct: 2513 TLLLYAAAFSTVAPVPPPPDGHPVSDTTSSSPCAPAFSTAACAASRIASNMLVYTSPPSV 2334
Query: 244 T 242
T
Sbjct: 2333 T 2331
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -3 / -3
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVP 440
+P KST *T+LMSGWKRPKCCS PS FSLNMANR VS A PG RGVP
Sbjct: 2687 EPEAKSTG*TALMSGWKRPKCCSVPSGFWFSLNMANRYVSTALPGLRGVP 2538
>gb|BM370310.2|BM370310 EBro08_SQ003_M21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M21 5', mRNA sequence
Length = 655
Score = 105 bits (225), Expect(2) = 2e-046
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3 / +1
Query: 441 GTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
GTPRRPGKA+ETYLFAMFNEN K EG EQHFGLFQPDMS VY VDF +GS
Sbjct: 256 GTPRRPGKAVETYLFAMFNENQKPEGTEQHFGLFQPDMSAVYPVDFASGS 405
Score = 100 bits (214), Expect(2) = 1e-041
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = -3 / -3
Query: 424 TTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSV 245
T LL AA + PP DG PVSDTTSSSPC PAFSTAAC AS IASNMLVYT+PPSV
Sbjct: 230 TLLLYAAAFSTVAPVPPPPDGHPVSDTTSSSPCAPAFSTAACAASRIASNMLVYTSPPSV 51
Query: 244 T 242
T
Sbjct: 50 T 48
Score = 100 bits (212), Expect(2) = 2e-046
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +3 / +1
Query: 237 STVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
++VTDGG VYTNMFDAI+DA HAAVEKAG QGLELVVSETGWPS GG
Sbjct: 43 ASVTDGGLVYTNMFDAILDAAHAAVEKAGAQGLELVVSETGWPSGGG 183
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -3 / -3
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVP 440
+P KST *T+LMSGWKRPKCCS PS FSLNMANR VS A PG RGVP
Sbjct: 404 EPEAKSTG*TALMSGWKRPKCCSVPSGFWFSLNMANRYVSTALPGLRGVP 255
>gb|BM444766.1|BM444766 EBem09_SQ006_G13_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ006_G13 5', mRNA sequence
Length = 374
Score = 105 bits (225), Expect(2) = 4e-027
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3 / +2
Query: 441 GTPRRPGKALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
GTPRRPGKA+ETYLFAMFNEN K EG EQHFGLFQPDMS VY VDF +GS
Sbjct: 116 GTPRRPGKAVETYLFAMFNENQKPEGTEQHFGLFQPDMSAVYPVDFASGS 265
Score = 89.0 bits (188), Expect(2) = 1e-025
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -3 / -3
Query: 589 DPAVKSTW*TSLMSGWKRPKCCSTPSALPFSLNMANR*VSRAFPGRRGVP 440
+P KST *T+LMSGWKRPKCCS PS FSLNMANR VS A PG RGVP
Sbjct: 264 EPEAKSTG*TALMSGWKRPKCCSVPSGFWFSLNMANRYVSTALPGLRGVP 115
Score = 47.3 bits (97), Expect(2) = 1e-025
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -3 / -3
Query: 442 PPSTCRTTLLLYAAAFSTLAPSPPADGQPVSDTTSSS 332
P + CR TLLLYAAAFST+AP PP T+SS
Sbjct: 111 PDAACRITLLLYAAAFSTVAPVPPPPDGHPVSDTTSS 1
Score = 35.4 bits (71), Expect(2) = 4e-027
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 336 ELVVSETGWPSAGG 377
ELVVSETGWPS GG
Sbjct: 2 ELVVSETGWPSGGG 43
>gb|CA017450.1|CA017450 HV05D22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05D22
5-PRIME, mRNA sequence
Length = 492
Score = 100 bits (214), Expect(2) = 9e-026
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +3 / +3
Query: 195 SGSVGPTQPGAGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAG 374
+GS + ++VTDGG VYTNMFDAI+DA HAAVEKAG QGLELVVSETGWPS G
Sbjct: 195 AGSSSSSATSKVKVASVTDGGLVYTNMFDAILDAAHAAVEKAGAQGLELVVSETGWPSGG 374
Query: 375 G 377
G
Sbjct: 375 G 377
Score = 100 bits (214), Expect(2) = 4e-022
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = -3 / -3
Query: 424 TTLLLYAAAFSTLAPSPPADGQPVSDTTSSSPCTPAFSTAACVASTIASNMLVYTAPPSV 245
T LL AA + PP DG PVSDTTSSSPC PAFSTAAC AS IASNMLVYT+PPSV
Sbjct: 424 TLLLYAAAFSTVAPVPPPPDGHPVSDTTSSSPCAPAFSTAACAASRIASNMLVYTSPPSV 245
Query: 244 T 242
T
Sbjct: 244 T 242
Score = 35.9 bits (72), Expect(2) = 9e-026
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3 / +3
Query: 441 GTPRRPGKALETYL 482
GTPRRPGKA+ETYL
Sbjct: 450 GTPRRPGKAVETYL 491
Score = 23.5 bits (45), Expect(2) = 4e-022
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 481 R*VSRAFPGRRGVP 440
R VS A PG RGVP
Sbjct: 490 RYVSTALPGLRGVP 449
>gb|AL500833.1|AL500833 AL500833 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02B04u 3', mRNA sequence
Length = 452
Score = 82.6 bits (174), Expect(3) = 2e-023
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +3 / -2
Query: 219 PGAGAASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXX 398
P ++TV D G YTN+FDA+VD+ +AA+EKAG G+++V+SE+GWPS G G
Sbjct: 412 PFVPGSTTVNDNGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPSDQGFGATAQN 233
Query: 399 XXXXXXXXXXXXDGGTPRRPG 461
GTP++ G
Sbjct: 232 ARAYNQGLINHVGNGTPKKAG 170
Score = 33.1 bits (66), Expect(3) = 2e-023
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 465 ALETYLFAMFNENGK 509
ALETY+FAMFNEN K
Sbjct: 169 ALETYIFAMFNENLK 125
Score = 30.4 bits (60), Expect(3) = 2e-023
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 112 LEKNFGLFKPNMSPAYAITF 53
>gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18n18 3', mRNA sequence
Length = 690
Score = 81.7 bits (172), Expect(3) = 5e-023
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +3 / -3
Query: 234 ASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXX 413
++TV D G YTN+FDA+VD+ +AA+EKAG G+++V+SE+GWPS G G
Sbjct: 511 STTVNDNGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPSDQGFGATAQNARAYN 332
Query: 414 XXXXXXXDGGTPRRPG 461
GTP++ G
Sbjct: 331 QGLINHVGNGTPKKSG 284
Score = 33.1 bits (66), Expect(3) = 5e-023
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / -3
Query: 465 ALETYLFAMFNENGK 509
ALETY+FAMFNEN K
Sbjct: 283 ALETYIFAMFNENLK 239
Score = 30.4 bits (60), Expect(3) = 5e-023
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 226 LEKNFGLFKPNMSPAYAITF 167
>gb|BJ460231.1|BJ460231 BJ460231 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39p16 3', mRNA sequence
Length = 603
Score = 80.8 bits (170), Expect(3) = 3e-022
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +3 / -1
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+T+AA+E A G++LVVSE+GWPSA G G
Sbjct: 585 GLTYTNLFDAMVDSTYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 406
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 405 GNGTPKRPG 379
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 375 LETYIFAMFNENLK 334
Score = 30.4 bits (60), Expect(3) = 3e-022
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -1
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 321 LEKNFGLFKPNMSPAYAITF 262
>gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39p16 5', mRNA sequence
Length = 598
Score = 80.8 bits (170), Expect(3) = 3e-022
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+T+AA+E A G++LVVSE+GWPSA G G
Sbjct: 210 GLTYTNLFDAMVDSTYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 389
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 390 GNGTPKRPG 416
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 420 LETYIFAMFNENLK 461
Score = 30.4 bits (60), Expect(3) = 3e-022
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 474 LEKNFGLFKPNMSPAYAITF 533
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
Length = 6260
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 5355 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 5480
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 5124 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 5270
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
Length = 4849
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 4348 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 4473
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 4117 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 4263
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
Length = 4643
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 3948 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 4073
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 3717 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 3863
>gb|BJ546633.1|BJ546633 BJ546633 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45b03 3', mRNA sequence
Length = 730
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / -2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 477 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 352
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / -2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 708 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 562
>gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h17 5', mRNA sequence
Length = 690
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 491 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 616
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 260 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 406
>gb|CB877858.1|CB877858 HP06G23T HP Hordeum vulgare subsp. vulgare cDNA clone HP06G23
5-PRIME, mRNA sequence
Length = 688
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 295 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 420
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 64 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 210
>gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24m02 5', mRNA sequence
Length = 643
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 400 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 525
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 169 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 315
>gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O12
5-PRIME, mRNA sequence
Length = 645
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 518 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 643
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 287 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 433
>gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. vulgare cDNA clone HU03F15
5-PRIME, mRNA sequence
Length = 626
Score = 62.5 bits (130), Expect(2) = 4e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 435 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 560
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 204 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 350
>gb|BI950008.1|BI950008 HVSMEl0017K22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017K22f, mRNA sequence
Length = 449
Score = 62.5 bits (130), Expect(2) = 6e-022
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 229 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 354
Score = 61.6 bits (128), Expect(2) = 6e-022
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3 / +1
Query: 237 STVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ V DG Y N+FD VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 4 TVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 144
>gb|CB884203.1|CB884203 HV10H06u HV Hordeum vulgare subsp. vulgare cDNA clone HV10H06
3-PRIME, mRNA sequence
Length = 557
Score = 63.8 bits (133), Expect(2) = 8e-022
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3 / -2
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETY+FAMFNEN K GVEQ++GLF P+M VY ++F
Sbjct: 265 AIETYIFAMFNENQKDSGVEQNWGLFYPNMQHVYPINF 152
Score = 59.7 bits (124), Expect(2) = 8e-022
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / -2
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPS GG
Sbjct: 496 SGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGG 350
>gb|CB884213.1|CB884213 HV14A09u HV Hordeum vulgare subsp. vulgare cDNA clone HV14A09
3-PRIME, mRNA sequence
Length = 556
Score = 63.8 bits (133), Expect(2) = 8e-022
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3 / -1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDF 578
A+ETY+FAMFNEN K GVEQ++GLF P+M VY ++F
Sbjct: 319 AIETYIFAMFNENQKDSGVEQNWGLFYPNMQHVYPINF 206
Score = 59.7 bits (124), Expect(2) = 8e-022
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / -1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPS GG
Sbjct: 550 SGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGG 404
>gb|BF258566.3|BF258566 HVSMEf0016B09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016B09f, mRNA sequence
Length = 773
Score = 62.0 bits (129), Expect(2) = 1e-021
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 249 AIETYVFCMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 374
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3 / +3
Query: 237 STVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ V DG Y N+FD VDA + A++K G ++LVVSE+GWPS GG
Sbjct: 24 TVVHDGSYGYQNLFDTTVDAFYTAMDKHGGSNVKLVVSESGWPSTGG 164
>gb|BI950595.1|BI950595 HVSMEl0021J13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021J13f, mRNA sequence
Length = 543
Score = 62.5 bits (130), Expect(2) = 1e-021
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 276 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 401
Score = 60.2 bits (125), Expect(2) = 1e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +3
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VDA + A+ K G ++LVVSE+GWPS GG
Sbjct: 45 SGTVVQDGSYGYQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSXGG 191
>gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45f07 3', mRNA sequence
Length = 662
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / -3
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+ +AA+E A G++LVVSE+GWPSA G G
Sbjct: 450 GLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 271
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 270 GNGTPKRPG 244
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 240 LETYIFAMFNENLK 199
Score = 30.4 bits (60), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 186 LEKNFGLFKPNMSPAYAITF 127
>gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m15 3', mRNA sequence
Length = 649
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / -1
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+ +AA+E A G++LVVSE+GWPSA G G
Sbjct: 511 GLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 332
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 331 GNGTPKRPG 305
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 301 LETYIFAMFNENLK 260
Score = 30.4 bits (60), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -1
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 247 LEKNFGLFKPNMSPAYAITF 188
>gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30k14 3', mRNA sequence
Length = 640
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / -2
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+ +AA+E A G++LVVSE+GWPSA G G
Sbjct: 459 GLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 280
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 279 GNGTPKRPG 253
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 249 LETYIFAMFNENLK 208
Score = 30.4 bits (60), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 195 LEKNFGLFKPNMSPAYAITF 136
>gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 3', mRNA sequence
Length = 574
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / -1
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+ +AA+E A G++LVVSE+GWPSA G G
Sbjct: 373 GLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 194
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 193 GNGTPKRPG 167
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -1
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 163 LETYIFAMFNENLK 122
Score = 30.4 bits (60), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / -1
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 109 LEKNFGLFKPNMSPAYAITF 50
>gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 5', mRNA sequence
Length = 553
Score = 78.0 bits (164), Expect(3) = 2e-021
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3 / +3
Query: 255 GAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGGEGXXXXXXXXXXXXXXXXX 434
G YTN+FDA+VD+ +AA+E A G++LVVSE+GWPSA G G
Sbjct: 222 GLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQGLINHV 401
Query: 435 DGGTPRRPG 461
GTP+RPG
Sbjct: 402 GNGTPKRPG 428
Score = 31.3 bits (62), Expect(3) = 2e-021
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 468 LETYLFAMFNENGK 509
LETY+FAMFNEN K
Sbjct: 432 LETYIFAMFNENLK 473
Score = 30.4 bits (60), Expect(3) = 2e-021
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 519 VEQHFGLFQPDMSEVYHVDF 578
+E++FGLF+P+MS Y + F
Sbjct: 486 LEKNFGLFKPNMSPAYAITF 545
>gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-glucanase gene, complete cds
Length = 2135
Score = 70.3 bits (147), Expect(3) = 4e-021
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3 / +1
Query: 249 DGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ G YT++FDA+VDA +AA+EKAG +++VVSE+GWPSAGG
Sbjct: 1657 NNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG 1785
Score = 37.3 bits (75), Expect(3) = 4e-021
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 438 GGTPRRPGKALETYLFAMFNENGK 509
GG + +ALETY+FAMFNEN K
Sbjct: 1843 GGGTPKKREALETYIFAMFNENQK 1914
Score = 30.9 bits (61), Expect(3) = 4e-021
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 513 EGVEQHFGLFQPDMSEVYHVDF 578
+ E+ FGLF PD S Y++ F
Sbjct: 1921 DATERSFGLFNPDKSPAYNIQF 1986
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase
Length = 1257
Score = 70.3 bits (147), Expect(3) = 5e-021
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 249 DGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ G YT++FDA+VDA +AA+EKAG +++VVSE+GWPSAGG
Sbjct: 722 NNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG 850
Score = 37.3 bits (75), Expect(3) = 5e-021
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 438 GGTPRRPGKALETYLFAMFNENGK 509
GG + +ALETY+FAMFNEN K
Sbjct: 908 GGGTPKKREALETYIFAMFNENQK 979
Score = 30.9 bits (61), Expect(3) = 5e-021
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 513 EGVEQHFGLFQPDMSEVYHVDF 578
+ E+ FGLF PD S Y++ F
Sbjct: 986 DATERSFGLFNPDKSPAYNIQF 1051
>gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-glucanase II mRNA, complete
cds
Length = 1215
Score = 70.3 bits (147), Expect(3) = 5e-021
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 249 DGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ G YT++FDA+VDA +AA+EKAG +++VVSE+GWPSAGG
Sbjct: 719 NNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG 847
Score = 37.3 bits (75), Expect(3) = 5e-021
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 438 GGTPRRPGKALETYLFAMFNENGK 509
GG + +ALETY+FAMFNEN K
Sbjct: 905 GGGTPKKREALETYIFAMFNENQK 976
Score = 30.9 bits (61), Expect(3) = 5e-021
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 513 EGVEQHFGLFQPDMSEVYHVDF 578
+ E+ FGLF PD S Y++ F
Sbjct: 983 DATERSFGLFNPDKSPAYNIQF 1048
>gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098M24f, mRNA sequence
Length = 636
Score = 70.3 bits (147), Expect(3) = 5e-021
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 249 DGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ G YT++FDA+VDA +AA+EKAG +++VVSE+GWPSAGG
Sbjct: 161 NNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG 289
Score = 37.3 bits (75), Expect(3) = 5e-021
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3 / +2
Query: 438 GGTPRRPGKALETYLFAMFNENGK 509
GG + +ALETY+FAMFNEN K
Sbjct: 347 GGGTPKKREALETYIFAMFNENQK 418
Score = 30.9 bits (61), Expect(3) = 5e-021
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 513 EGVEQHFGLFQPDMSEVYHVDF 578
+ E+ FGLF PD S Y++ F
Sbjct: 425 DATERSFGLFNPDKSPAYNIQF 490
>gb|BG415255.2|BG415255 HVSMEk0005L24f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005L24f, mRNA sequence
Length = 626
Score = 60.2 bits (125), Expect(2) = 7e-021
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVE ++GLF P+M VY + F GS
Sbjct: 241 AIETYVFSMFNENQKDNGVEHNWGLFYPNMQHVYPISF**GS 366
Score = 60.2 bits (125), Expect(2) = 7e-021
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3 / +1
Query: 231 AASTVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ + V DG Y N+FD VD + A+ K G ++LVVSE+GWPSAGG
Sbjct: 10 SGTVVQDGSYGYQNLFDTTVDPFYTAMAKRGGSNVKLVVSESGWPSAGG 156
>gb|BI950007.1|BI950007 HVSMEl0017K20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017K20f, mRNA sequence
Length = 449
Score = 62.5 bits (130), Expect(2) = 9e-021
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 465 ALETYLFAMFNENGKAEGVEQHFGLFQPDMSEVYHVDFTAGS 590
A+ETY+F+MFNEN K GVEQ++GLF P+M VY + F GS
Sbjct: 229 AIETYVFSMFNENQKDNGVEQNWGLFYPNMQHVYPISF**GS 354
Score = 57.4 bits (119), Expect(2) = 9e-021
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3 / +1
Query: 237 STVTDGGAVYTNMFDAIVDATHAAVEKAGVQGLELVVSETGWPSAGG 377
+ V DG Y N+F VDA + A+ K G ++LVVSE+GWPSAGG
Sbjct: 4 TVVQDGSYGYQNLFYTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGG 144
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 277,365,237
Number of Sequences: 312970
Number of extensions: 3946614
Number of successful extensions: 54921
Number of sequences better than 1.0e-020: 42
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9094407624
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)