TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437739.2.2
(2231 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan... 773 0.0
gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydro... 434 0.0
gb|CK125399.1|CK125399 BES1824107o09 BES1824 Hordeum vulgar... 317 e-124
gb|BG366042.2|BG366042 HVSMEi0004P02f Hordeum vulgare 20 DA... 339 e-115
gb|BU999528.1|BU999528 HI14M13r HI Hordeum vulgare subsp. v... 396 e-109
gb|BQ460323.1|BQ460323 HA06J20r HA Hordeum vulgare subsp. v... 232 e-106
gb|BQ459096.1|BQ459096 HA02F14r HA Hordeum vulgare subsp. v... 256 e-101
gb|AL503553.1|AL503553 AL503553 Hordeum vulgare Barke roots... 343 e-100
gb|CA021153.1|CA021153 HZ39E06r HZ Hordeum vulgare subsp. v... 300 e-100
gb|AL509036.1|AL509036 AL509036 Hordeum vulgare Barke devel... 235 1e-099
gb|AL505489.1|AL505489 AL505489 Hordeum vulgare Barke roots... 262 2e-098
gb|BQ766906.1|BQ766906 EBro08_SQ007_O10_R root, 3 week, dro... 264 2e-098
gb|BI955317.1|BI955317 HVSMEm0022I03f Hordeum vulgare green... 355 6e-097
gb|BU976238.1|BU976238 HA03G04r HA Hordeum vulgare subsp. v... 263 9e-097
gb|AL508845.1|AL508845 AL508845 Hordeum vulgare Barke devel... 330 5e-095
gb|BQ462564.1|BQ462564 HI01E18T HI Hordeum vulgare subsp. v... 322 4e-094
gb|BQ462668.1|BQ462668 HI01K09T HI Hordeum vulgare subsp. v... 343 3e-093
gb|BF258158.2|BF258158 HVSMEf0014P07f Hordeum vulgare seedl... 226 2e-092
gb|AL504655.1|AL504655 AL504655 Hordeum vulgare Barke roots... 285 2e-091
gb|CA015249.1|CA015249 HT13L19r HT Hordeum vulgare subsp. v... 331 7e-090
gb|BQ464740.1|BQ464740 HU01E02T HU Hordeum vulgare subsp. v... 325 1e-089
gb|CA007641.1|CA007641 HU08J08r HU Hordeum vulgare subsp. v... 266 3e-088
gb|AV918661.1|AV918661 AV918661 K. Sato unpublished cDNA li... 286 1e-087
gb|CA020043.1|CA020043 HV14C18r HV Hordeum vulgare subsp. v... 311 2e-087
gb|CB883402.1|CB883402 HQ02C08w HQ Hordeum vulgare subsp. v... 313 2e-084
gb|AV919570.1|AV919570 AV919570 K. Sato unpublished cDNA li... 286 3e-084
gb|CA021252.1|CA021252 HZ39I23r HZ Hordeum vulgare subsp. v... 311 1e-083
gb|AV833446.1|AV833446 AV833446 K. Sato unpublished cDNA li... 223 2e-083
gb|BU995244.1|BU995244 HM09K13r HM Hordeum vulgare subsp. v... 194 2e-082
gb|BU978383.1|BU978383 HA13B04r HA Hordeum vulgare subsp. v... 307 2e-082
gb|AV913362.1|AV913362 AV913362 K. Sato unpublished cDNA li... 182 3e-082
gb|AV920100.1|AV920100 AV920100 K. Sato unpublished cDNA li... 286 4e-082
gb|BQ465777.1|BQ465777 HU04K15r HU Hordeum vulgare subsp. v... 292 6e-082
gb|BQ458498.1|BQ458498 HA05A21r HA Hordeum vulgare subsp. v... 300 8e-082
gb|CA019039.1|CA019039 HV10I20r HV Hordeum vulgare subsp. v... 303 3e-081
gb|BU996833.1|BU996833 HM14O21r HM Hordeum vulgare subsp. v... 191 5e-079
gb|AV925468.1|AV925468 AV925468 K. Sato unpublished cDNA li... 207 8e-079
gb|BF255596.2|BF255596 HVSMEf0007E15f Hordeum vulgare seedl... 236 6e-078
gb|BQ468423.1|BQ468423 HM01D10T HM Hordeum vulgare subsp. v... 275 2e-077
gb|AV909243.1|AV909243 AV909243 K. Sato unpublished cDNA li... 288 9e-077
gb|AV911128.1|AV911128 AV911128 K. Sato unpublished cDNA li... 288 9e-077
gb|BF627275.3|BF627275 HVSMEb0004G19f Hordeum vulgare seedl... 286 3e-076
gb|AV930613.1|AV930613 AV930613 K. Sato unpublished cDNA li... 286 3e-076
gb|BU997464.1|BU997464 HI08B05r HI Hordeum vulgare subsp. v... 278 7e-074
gb|BU977300.1|BU977300 HA11D01r HA Hordeum vulgare subsp. v... 278 1e-073
gb|BQ469930.1|BQ469930 HX01E12T HX Hordeum vulgare subsp. v... 273 3e-072
gb|BI956324.1|BI956324 HVSMEn0002G07f Hordeum vulgare rachi... 270 2e-071
gb|BM098044.2|BM098044 EBpi03_SQ002_G06_R pistil, 4 DPA, no... 205 3e-071
gb|BU973151.1|BU973151 HB23O18r BC Hordeum vulgare subsp. v... 269 6e-071
gb|CA006690.1|CA006690 HU05G22r HU Hordeum vulgare subsp. v... 209 1e-070
gb|BF257182.2|BF257182 HVSMEf0012B20f Hordeum vulgare seedl... 208 3e-070
gb|BM374213.2|BM374213 EBma03_SQ003_P16_R maternal, 8 DPA, ... 265 7e-070
gb|BQ663930.1|BQ663930 HU04K15u HU Hordeum vulgare subsp. v... 260 1e-069
gb|BQ468024.1|BQ468024 HR01L02r HR Hordeum vulgare subsp. v... 263 3e-069
gb|BG366852.1|BG366852 HVSMEi0008K10f Hordeum vulgare 20 DA... 114 2e-068
gb|BJ467252.1|BJ467252 BJ467252 K. Sato unpublished cDNA li... 257 2e-067
gb|CB858339.1|CB858339 HI06K15w HI Hordeum vulgare subsp. v... 257 2e-067
gb|AV833400.1|AV833400 AV833400 K. Sato unpublished cDNA li... 247 1e-066
gb|BM374002.2|BM374002 EBma03_SQ003_F17_R maternal, 8 DPA, ... 249 3e-065
gb|BI951410.1|BI951410 HVSMEl0025N13f Hordeum vulgare spike... 149 4e-064
gb|BU977331.1|BU977331 HA11D20r HA Hordeum vulgare subsp. v... 200 4e-064
gb|CA020218.1|CA020218 HV14K20r HV Hordeum vulgare subsp. v... 223 1e-063
gb|BU995937.1|BU995937 HM11N11r HM Hordeum vulgare subsp. v... 237 2e-063
gb|AV913828.1|AV913828 AV913828 K. Sato unpublished cDNA li... 240 9e-063
gb|CB882302.1|CB882302 HL01H18w HL Hordeum vulgare subsp. v... 228 5e-062
gb|BQ468807.1|BQ468807 HM02G11r HM Hordeum vulgare subsp. v... 238 7e-062
gb|CB881387.1|CB881387 HM09K13w HM Hordeum vulgare subsp. v... 238 7e-062
gb|CA028903.1|CA028903 HZ63J10r HZ Hordeum vulgare subsp. v... 237 2e-061
gb|CB882092.1|CB882092 HM11N11w HM Hordeum vulgare subsp. v... 237 2e-061
gb|BM098018.2|BM098018 EBpi03_SQ002_F03_R pistil, 4 DPA, no... 231 2e-061
gb|AV914506.1|AV914506 AV914506 K. Sato unpublished cDNA li... 138 4e-061
gb|BU983489.1|BU983489 HA29O13r HA Hordeum vulgare subsp. v... 235 9e-061
gb|AL507457.1|AL507457 AL507457 Hordeum vulgare Barke devel... 230 2e-060
gb|CA022582.1|CA022582 HZ43L07r HZ Hordeum vulgare subsp. v... 162 2e-059
gb|BI947544.1|BI947544 HVSMEl0005N11f Hordeum vulgare spike... 108 1e-058
gb|CA027301.1|CA027301 HZ58I10r HZ Hordeum vulgare subsp. v... 226 4e-058
gb|BG416639.1|BG416639 HVSMEk0013O04f Hordeum vulgare testa... 148 4e-058
gb|BQ657885.1|BQ657885 HA06J20u HA Hordeum vulgare subsp. v... 220 2e-056
gb|BQ662134.1|BQ662134 HR01L02u HR Hordeum vulgare subsp. v... 219 4e-056
gb|BU976239.1|BU976239 HA03G04u HA Hordeum vulgare subsp. v... 216 3e-055
gb|BU997026.1|BU997026 HI06K15r HI Hordeum vulgare subsp. v... 216 4e-055
gb|BG418718.1|BG418718 HVSMEk0024C10f Hordeum vulgare testa... 214 1e-054
gb|BQ661201.1|BQ661201 HM02G11u HM Hordeum vulgare subsp. v... 213 3e-054
gb|CX662599.1|CX662599 EST 422 Expressed sequences from Bar... 211 1e-053
gb|BU977332.1|BU977332 HA11D20u HA Hordeum vulgare subsp. v... 210 3e-053
gb|CA023517.1|CA023517 HZ46H20r HZ Hordeum vulgare subsp. v... 204 1e-051
gb|AL502756.1|AL502756 AL502756 Hordeum vulgare Barke roots... 199 1e-050
gb|BQ765660.1|BQ765660 EBro03_SQ007_F19_R root, 3 week, wat... 197 2e-049
gb|BI956426.1|BI956426 HVSMEn0003E13f Hordeum vulgare rachi... 194 1e-048
gb|AL507325.1|AL507325 AL507325 Hordeum vulgare Barke devel... 191 2e-048
gb|BE411093.1|BE411093 ISC002.C07F990406 ITEC ISC Barley Le... 188 1e-046
gb|AL510704.1|AL510704 AL510704 Hordeum vulgare Barke devel... 187 3e-046
gb|BM101478.2|BM101478 EBpi01_SQ003_P14_R pistil, 1 DPA, no... 181 2e-044
gb|CA026644.1|CA026644 HZ56I06r HZ Hordeum vulgare subsp. v... 111 5e-044
gb|CA009386.1|CA009386 HU13P18r HU Hordeum vulgare subsp. v... 133 6e-041
gb|BM376573.1|BM376573 EBem05_SQ002_J19_R embryo, 14 DPA, n... 169 7e-041
gb|BU996476.1|BU996476 HM13L18r HM Hordeum vulgare subsp. v... 97 3e-039
gb|CA032659.1|CA032659 HX13N01r HX Hordeum vulgare subsp. v... 163 4e-039
gb|CA000004.1|CA000004 HS16F17u HS Hordeum vulgare subsp. v... 156 5e-037
gb|BM100567.2|BM100567 EBma01_SQ005_J17_R maternal, 4 DPA, ... 136 7e-037
gb|AV921443.1|AV921443 AV921443 K. Sato unpublished cDNA li... 109 1e-036
gb|CA016117.1|CA016117 HV10I20u HV Hordeum vulgare subsp. v... 154 2e-036
gb|BF257026.2|BF257026 HVSMEf0011K13f Hordeum vulgare seedl... 127 8e-035
gb|BU980298.1|BU980298 HA20E07r HA Hordeum vulgare subsp. v... 148 1e-034
gb|BU999923.1|BU999923 HS16P05u HS Hordeum vulgare subsp. v... 145 1e-033
gb|CB858709.1|CB858709 HI08B05w HI Hordeum vulgare subsp. v... 144 1e-033
gb|AL502558.1|AL502558 AL502558 Hordeum vulgare Barke roots... 140 2e-032
gb|AL511981.1|AL511981 AL511981 Hordeum vulgare Barke devel... 114 2e-031
gb|BQ663194.1|BQ663194 HU01E02w HU Hordeum vulgare subsp. v... 137 2e-031
gb|BQ761635.1|BQ761635 EBem10_SQ001_J09_R embryo, 2 Day ger... 137 2e-031
gb|BQ660173.1|BQ660173 HI01E18w HI Hordeum vulgare subsp. v... 137 3e-031
gb|CA006048.1|CA006048 HU05G22u HU Hordeum vulgare subsp. v... 121 4e-031
gb|BQ660249.1|BQ660249 HI01K09w HI Hordeum vulgare subsp. v... 133 4e-030
gb|BI957799.1|BI957799 HVSMEn0011E04f Hordeum vulgare rachi... 89 4e-030
gb|AV917377.1|AV917377 AV917377 K. Sato unpublished cDNA li... 127 3e-028
gb|BU985657.1|BU985657 HF08D21r HF Hordeum vulgare subsp. v... 126 4e-028
gb|BF628278.1|BF628278 HVSMEb0003J18f Hordeum vulgare seedl... 124 2e-027
gb|AL501952.1|AL501952 AL501952 Hordeum vulgare Barke roots... 116 6e-026
gb|BF254732.1|BF254732 HVSMEf0004N21f Hordeum vulgare seedl... 105 7e-025
gb|CA017215.1|CA017215 HV14C18u HV Hordeum vulgare subsp. v... 111 2e-023
gb|CA032277.1|CA032277 HX12I21r HX Hordeum vulgare subsp. v... 109 8e-023
gb|BM374115.1|BM374115 EBma03_SQ003_L03_R maternal, 8 DPA, ... 104 3e-021
>gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan exohydrolase isoenzyme
ExoI mRNA, complete cds
Length = 2161
Score = 773 bits (1682), Expect(2) = 0.0
Identities = 318/392 (81%), Positives = 351/392 (89%)
Frame = +3 / +2
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+DA+K VE RV DLL RMTLAEK+GQMTQIER+VA+P LRD +I VPRK
Sbjct: 107 YKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKG 286
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
ATA EW MV FQKAC+STRLGIPMIYGIDAVHG NNVYGATIFPHNVGLGATRDP LV
Sbjct: 287 ATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLV 466
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDV 740
KRIG ATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSED RIVQ+MTELIPGLQGDV
Sbjct: 467 KRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDV 646
Query: 741 PQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRK 920
P++FTSGMPF AGK+KVAACAKHFVGDGGT +GINENNTII+R+GL++IHMPAY +A+ K
Sbjct: 647 PKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMDK 826
Query: 921 GFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSV 1100
G STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF ISDWEGIDR+T+P G++YSYSV
Sbjct: 827 GVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSV 1006
Query: 1101 QASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMP 1280
+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRIDDAVTRILRVKFTMGLFENP
Sbjct: 1007 KASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYA 1186
Query: 1281 DPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 1187 DPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 1282
Score = 577 bits (1254), Expect(4) = 0.0
Identities = 256/337 (75%), Positives = 269/337 (79%)
Frame = -2 / -2
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
LPF SSTSD AS A+SLCSCFPS SA GS GFS RPMVNLTRRIRVTASSILL+G+
Sbjct: 1281 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMVNLTRRIRVTASSILLMGM 1102
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP L
Sbjct: 1101 TPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPLNL 922
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMP 836
S+SLR PV R WLACIL+PFQLE*EIMTVE PL A AGMWM IRP R MMVLFSLMP
Sbjct: 921 SVSLRYPVTRSWLACILTPFQLE*EIMTVETPLSMAFLYAGMWMFIRPSRLMMVLFSLMP 742
Query: 835 FCVPPSPTKCLAHAATLSFPAAKGMPLVKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRP 656
VPPSPTKC AHAATL FPA KGMPLVK GTSPCRPGMSSVM CTIR *HRP
Sbjct: 741 STVPPSPTKCFAHAATLFFPATKGMPLVKSLGTSPCRPGMSSVMDCTIRRSSL*LS*HRP 562
Query: 655 HLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWPWT 476
HLGS HTAM GA AYWMPVALTSSAVA+PILFTR+GS VAPRPTLWGK+VAP TL WPWT
Sbjct: 561 HLGSLHTAMQGAKAYWMPVALTSSAVASPILFTRYGSRVAPRPTLWGKIVAP*TLFWPWT 382
Query: 475 ASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
ASMP*I+GMP RVD AFWK TM+ HS AVA RGT
Sbjct: 381 ASMP*IMGMPSRVDMQAFWKPSTMSCHSLAVAPLRGT 271
Score = 410 bits (889), Expect(2) = 0.0
Identities = 163/200 (81%), Positives = 177/200 (88%)
Frame = +3 / +2
Query: 1383 DAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPST 1562
DAPLLPLPKKA +ILVAGSHADNLGYQCGGWTIEWQGD L+AVKAAVDPST
Sbjct: 1292 DAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPST 1471
Query: 1563 EVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCV 1742
VVFAE+PDAEFV+SGGFSYAIVAVGEHPYTETKGD++NLTIP+PG STVQ VC VRC
Sbjct: 1472 VVVFAENPDAEFVKSGGFSYAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCA 1651
Query: 1743 TVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLP 1922
TVLISGRPVV+QP L A DA+VAAWLPG+EGQGVTD LFGD+GFTG+LPRTWF+SVDQLP
Sbjct: 1652 TVLISGRPVVVQPLLAASDALVAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLP 1831
Query: 1923 MNYGDAHYDPLFPLGFGLTT 1982
MN GDAHYDPLF LG+GLTT
Sbjct: 1832 MNVGDAHYDPLFRLGYGLTT 1891
Score = 335 bits (726), Expect(4) = 0.0
Identities = 144/187 (77%), Positives = 150/187 (80%)
Frame = -2 / -2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
CASP FIGSWSTDLNHVRGS PVNP SPNS SVTP PS PGS AAT+AS A +GC TTG
Sbjct: 1851 CASPTFIGSWSTDLNHVRGSLPVNPKSPNSASVTPCPSEPGSHAATSASEAASSGCTTTG 1672
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
RPLMSTV HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTAT+A EKPPLLTNSASG
Sbjct: 1671 RPLMSTVAHRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTATMA*EKPPLLTNSASG 1492
Query: 1582 LSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPATRILAAFLG 1403
SANTT+VDGSTAAFTA PCHS+V PPHW PRLSAWLPATRIL AFLG
Sbjct: 1491 FSANTTTVDGSTAAFTASRMVVPTVVRPVSPCHSMVQPPHW*PRLSAWLPATRILGAFLG 1312
Query: 1402 RGSSGAS 1382
G SGAS
Sbjct: 1311 SGRSGAS 1291
Score = 316 bits (685), Expect(4) = e-122
Identities = 143/247 (57%), Positives = 162/247 (65%)
Frame = -1 / -1
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVLE+ HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN SL R
Sbjct: 1180 GVLEETHGELDPQDPGHGIVDPAHGDDAAVDMAGQDADELLVVVRHHDHVKAGKNGSLDR 1001
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALA 915
VGVVR R GDPV+ALP+ D DEV+VGVH +PVPAGVGDHDGG+ L
Sbjct: 1000 VGVVRSGRGGDPVNALPV*DHEALEFERVLEVSGDEVLVGVHLDPVPAGVGDHDGGDPLV 821
Query: 914 ERVQVGRHVDAYQXXXXXXXXXXXXXXXXATVADEVLGARRDLVLSGGEGHAAGEVLRDV 735
V V RHVD +Q A VA ++L A LVLSG EGHAAGEVL DV
Sbjct: 820 HGVLVRRHVDVHQALTVDDGVVLVDAVHRAAVAHKMLRACSHLVLSGDEGHAAGEVLGDV 641
Query: 734 ALQARDELSHGLHDTXXXXXXXXXXXXPRITAHRNAWRERVLDAGGSHFKRGRGADPLHQ 555
ALQA DEL HGLHD RI+AHR+A RE VLDAGGS F+RG ADPLH+
Sbjct: 640 ALQAGDELRHGLHDPAILAVALIAPPPSRISAHRDARREGVLDAGGSDFERGGLADPLHE 461
Query: 554 VWIPGGS 534
V +PGG+
Sbjct: 460 VRVPGGA 440
Score = 130 bits (279), Expect(4) = e-122
Identities = 64/99 (64%), Positives = 69/99 (69%)
Frame = -1 / -1
Query: 1718 RLYGARPGVRDRQVHAVALGLRVRVLAHGHDRVREAAAPDELGVGALREXXXXXXXXXXX 1539
RL+GA+ G+RD QV VALGLRVRVLAHG+D V EAAA DEL VG L E
Sbjct: 1627 RLHGAQAGLRDGQVQVVALGLRVRVLAHGNDGVGEAAALDELRVGVLGEHHDRRRVHGRL 1448
Query: 1538 XXVQDRGADGGAPRVALPLDRPPAALVPQVVGVAPCDQD 1422
+QD GA GGA RVALPLD P AALV QVVGVAP DQD
Sbjct: 1447 HRLQDGGAHGGAARVALPLDGPAAALVAQVVGVAPGDQD 1331
Score = 92.3 bits (195), Expect(7) = 1e-067
Identities = 43/77 (55%), Positives = 46/77 (59%)
Frame = +2 / +1
Query: 539 HQGSKPGEXXXXXXXXXXXXXXXPVRVRAMHCGVP*SEVGPVLRELQRGPPYRAGHD*AH 718
H G P E PVR+RA+H GV SE+G VL ELQRG P RA HD AH
Sbjct: 445 HPGPVPREEDRRGHRARSQSHRHPVRLRALHRGVQRSEMGAVL*ELQRGSPDRAVHDGAH 624
Query: 719 PGPAGRRPAELHQRHAL 769
P PAGRRP LHQRHAL
Sbjct: 625 PRPAGRRPQGLHQRHAL 675
Score = 89.5 bits (189), Expect(5) = 1e-037
Identities = 39/65 (60%), Positives = 41/65 (63%)
Frame = -3 / -3
Query: 732 PAGPG*AQSWPARYGGPRCSSRSTGPTSDHGTPQCMARTRTGCRWLSLQAXXXXXXXSPG 553
PAG G*A SW AR G PRCSS ST P SD TP+C AR RTGCRWL L+A S G
Sbjct: 638 PAGRG*APSWTARSGDPRCSSHSTAPISDLCTPRCKARRRTGCRWL*LRARWPRRSSSRG 459
Query: 552 LDPWW 538
P W
Sbjct: 458 TGPGW 444
Score = 65.7 bits (137), Expect(7) = 1e-067
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 866 PAGPDKHPHAGLPGRAPQGXXXXXXXXXXXERAQNARQPQPHHRLPQGQA 1015
P GPD+HPHAG+ R QG ER Q+ARQP+P HR+PQG A
Sbjct: 772 P*GPDEHPHAGVQERHGQGGLHRHDLLLQLERGQDARQPRPRHRIPQGHA 921
Score = 60.6 bits (126), Expect(7) = 1e-067
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2 / +1
Query: 1844 HRRAVRGLRVHGEAAADVVQVGGPAADE 1927
HRRAVR LRVH EAAADVVQVGGPAADE
Sbjct: 1753 HRRAVRRLRVHREAAADVVQVGGPAADE 1836
Score = 59.3 bits (123), Expect(7) = 1e-067
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +2 / +1
Query: 1070 PSRGELLLLCAGFDSCWP*HDHGAQQLPKLHHHPD 1174
P R LLLL GF SC P*HDHGA+QLP +H HPD
Sbjct: 976 PCRI*LLLLGQGFHSCRP*HDHGAEQLPAVHQHPD 1080
Score = 51.9 bits (107), Expect(5) = 1e-037
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = -3 / -3
Query: 1173 SGW**SFGSCWAP*SCQGQQESKPAQSRSSSPLEGW 1066
SG **+ GSC AP*SCQG+QE KP SRSS +GW
Sbjct: 1079 SGC**TAGSCSAP*SCQGRQEWKP*PSRSSQIRQGW 972
Score = 44.6 bits (91), Expect(5) = 1e-037
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -3 / -3
Query: 1707 CSARGPGSSGSCCRPWSPC 1651
CS R PG SGS CRPWSPC
Sbjct: 1616 CSGRAPGWSGSGCRPWSPC 1560
Score = 43.2 bits (88), Expect(7) = 1e-067
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 1646 PVHGDQGRQHEPDDPGPRAE 1705
PVHGDQGRQ EPD PG R E
Sbjct: 1555 PVHGDQGRQPEPDHPGARPE 1614
Score = 37.3 bits (75), Expect(4) = e-122
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1 / -1
Query: 1856 QHVGDTLALGPRQPGRHDRVHGAQERLY 1773
Q VGD+L L +P RH RV G Q+RL+
Sbjct: 1765 QRVGDSLPLRAGEPRRHQRVGGGQQRLH 1682
Score = 35.0 bits (70), Expect(4) = 0.0
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 263 QRHPRQQVPDADLHVLAGVLV 201
QRHP Q+V DA LH L GVLV
Sbjct: 169 QRHPPQEVGDAVLHGLGGVLV 107
Score = 35.0 bits (70), Expect(7) = 1e-067
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 1222 P*LGFCASSSPWACSRTPCRT 1284
P* G C SSSPW SRTP T
Sbjct: 1128 P*PGSCGSSSPWVSSRTPTLT 1190
Score = 33.6 bits (67), Expect(7) = 1e-067
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1 / +3
Query: 1768 W*YSRSWAPWTRSWRPGCRGPRARVSP 1848
W SR W P TR WR G R R SP
Sbjct: 1677 WWCSRCWPPPTRWWRRGSPARRGRESP 1757
Score = 32.7 bits (65), Expect(5) = 1e-037
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3 / -3
Query: 921 PCGARPGRPACGCLSGPAG 865
PC R PACGC SGP G
Sbjct: 827 PCPWRSCTPACGCSSGPHG 771
Score = 29.9 bits (59), Expect(4) = 0.0
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 313 GDATIRSICVIWPTFSASVI 254
G AT RSI VI P FSASVI
Sbjct: 219 GVATSRSIWVICPIFSASVI 160
Score = 29.9 bits (59), Expect(4) = e-122
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1 / -1
Query: 452 DAEARGQARLLEVADHGDPXXXXXXXXXXXXXXXXXXADVVVPE 321
DAE RG A LLE H P AD VVPE
Sbjct: 358 DAEPRGHAGLLEAVHHVLPLLGRGPFARHAAAAAEQAADEVVPE 227
Score = 29.0 bits (57), Expect(5) = 1e-037
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / -3
Query: 1029 SPGS*ACP*GSL**GCGWRA 970
SP *ACP*G * G GWRA
Sbjct: 935 SP*I*ACP*GIR*RGLGWRA 876
>gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA,
complete cds
Length = 2105
Score = 434 bits (941), Expect(3) = 0.0
Identities = 177/247 (71%), Positives = 203/247 (82%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 653 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 832
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 833 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 1012
Query: 1113 LAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSL 1292
AG+DMIMVP Y FI LT V + +IPMSRI+DAV RILRVKFTMGLFE+P DPSL
Sbjct: 1013 GAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSL 1192
Query: 1293 ADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGG 1472
+LGKQEHRDLAREAVRKSLVLLKNGK PLLPLPKKA +ILVAGSHAD+LG QCGG
Sbjct: 1193 VGELGKQEHRDLAREAVRKSLVLLKNGKSASTPLLPLPKKAGKILVAGSHADDLGNQCGG 1372
Query: 1473 WTIEWQG 1493
WTI WQG
Sbjct: 1373 WTITWQG 1393
Score = 326 bits (706), Expect(5) = 0.0
Identities = 150/244 (61%), Positives = 166/244 (68%)
Frame = -2 / -3
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH +VHPPHW P+ SAWLPATRIL AF GRG++G PF S+T+D TASRARS CSC
Sbjct: 1389 CHVMVHPPHWLPKSSAWLPATRILPAFFGRGNNGVEADFPFFSNTNDFLTASRARSRCSC 1210
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
FPS RLGS G SNRPMVN T RI TAS ILL+G+ T VR M * GTMI
Sbjct: 1209 FPSSPTRLGSA*GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMI 1030
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQL 950
MS PA A TE*E*F PGGLV SMP QSEI KP LSL RK V R WLACI PFQL
Sbjct: 1029 MSIPAPTPASTE*E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQL 850
Query: 949 E*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAA 770
E E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT P
Sbjct: 849 EYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPT 670
Query: 769 KGMP 758
G+P
Sbjct: 669 YGLP 658
Score = 317 bits (686), Expect(3) = 0.0
Identities = 131/181 (72%), Positives = 148/181 (81%)
Frame = +3 / +2
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D + + VR++DLL RMTLAEK+GQMTQIER A+ +A+ Y+I VP Q
Sbjct: 104 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEAMSKYFIGSVLSGGGSVPSPQ 283
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
A+AA W +MV++ QK LSTRLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRDP LV
Sbjct: 284 ASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPMLV 463
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDV 740
KRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDV
Sbjct: 464 KRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDV 643
Query: 741 P 743
P
Sbjct: 644 P 646
Score = 286 bits (619), Expect(3) = 0.0
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / +2
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 1430 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 1609
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 1610 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 1789
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 1790 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 1894
Score = 192 bits (413), Expect(5) = 0.0
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 1845 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 1666
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 1665 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 1486
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 1485 FSEKTTSVLGSTVDLIA 1435
Score = 145 bits (311), Expect(5) = 0.0
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -3
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 564 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 385
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 384 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 268
Score = 79.4 bits (167), Expect(5) = 2e-035
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = -1 / -2
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
EA V G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV
Sbjct: 1192 EAWVSIGALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGT 1013
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPI 1041
N SL+ + +V WRA +P++ALP+
Sbjct: 1012 NSSLN*IRIVHAWRASNPINALPV 941
Score = 46.9 bits (96), Expect(5) = 2e-035
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -2
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 892 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 776
Score = 40.5 bits (82), Expect(5) = 2e-035
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -1 / -2
Query: 743 RDVALQARDELSHGLHDTXXXXXXXXXXXXPRITAHRNAWRERVLDAGGSHFKRGRGADP 564
R+V LQ RDE H L + ++ HRN + V ++ S+FK + P
Sbjct: 646 RNVTLQTRDECGH*LDNLWVFAVAFIAASPSWVSTHRNTRSKSVRNSCCSNFKSSCFSYP 467
Query: 563 LHQVWIPGGS 534
L+Q +PG +
Sbjct: 466 LYQHRVPGST 437
Score = 36.8 bits (74), Expect(5) = 2e-035
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 1856 QHVGDTLALGPRQPGRHDRVHGAQERLY 1773
QHVG LAL QP +RVHGA RL+
Sbjct: 1759 QHVGHALALRAGQPRGDERVHGADVRLH 1676
Score = 36.3 bits (73), Expect(5) = 2e-035
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 1496 VALPLDRPPAALVPQVVGVAPCDQD 1422
++LP D P +ALV QVVGVA D+D
Sbjct: 1396 LSLPCDGPSSALVAQVVGVASSDED 1322
Score = 27.6 bits (54), Expect(5) = 0.0
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 645 GTSPCRPEMSVVIDWT 598
Score = 26.7 bits (52), Expect(5) = 0.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 295 SICVIWPTFSASVI 254
SI VIWP FSA VI
Sbjct: 198 SIWVIWPIFSARVI 157
>gb|CK125399.1|CK125399 BES1824107o09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O097 5-PRIME, mRNA sequence
Length = 920
Score = 317 bits (686), Expect(3) = e-124
Identities = 131/181 (72%), Positives = 148/181 (81%)
Frame = +3 / +1
Query: 201 YQDASKDVEVRVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQ 380
Y+D + + VR++DLL RMTLAEK+GQMTQIER A+ +A+ Y+I VP Q
Sbjct: 28 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEAMSKYFIGSVLSGGGSVPSPQ 207
Query: 381 ATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLV 560
A+AA W +MV++ QK LSTRLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRDP LV
Sbjct: 208 ASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPMLV 387
Query: 561 KRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDV 740
KRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDV
Sbjct: 388 KRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDV 567
Query: 741 P 743
P
Sbjct: 568 P 570
Score = 145 bits (311), Expect(5) = 4e-065
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 488 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 309
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 308 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 192
Score = 131 bits (280), Expect(3) = e-124
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3 / +1
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 577 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 756
Query: 933 VMISYSSWNGLKMHAN 980
VM SYSSWNG KMHAN
Sbjct: 757 VMTSYSSWNGKKMHAN 804
Score = 98.7 bits (209), Expect(5) = 4e-065
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -2 / -1
Query: 979 LACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLA 800
LACI PFQLE E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT C A
Sbjct: 803 LACIFLPFQLEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFA 624
Query: 799 HAATLSFPAAKGMP 758
HAAT P G+P
Sbjct: 623 HAATFLLPPTYGLP 582
Score = 40.0 bits (81), Expect(3) = e-124
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3 / +3
Query: 1017 NFQGFTISDWEGIDRVTSP 1073
NF+GF IS+W+GIDR+T P
Sbjct: 843 NFRGFGISNWQGIDRITXP 899
Score = 27.6 bits (54), Expect(5) = 4e-065
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 569 GTSPCRPEMSVVIDWT 522
Score = 26.7 bits (52), Expect(5) = 4e-065
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 295 SICVIWPTFSASVI 254
SI VIWP FSA VI
Sbjct: 122 SIWVIWPIFSARVI 81
Score = 26.7 bits (52), Expect(5) = 4e-065
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2 / -2
Query: 1072 GLVTLSMPSQSEIVKPWKLSLSLRK 998
G V SMP Q EI KP K L +K
Sbjct: 898 GXVIRSMPCQFEIPKPRKFELVXQK 824
>gb|BG366042.2|BG366042 HVSMEi0004P02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004P02f, mRNA sequence
Length = 914
Score = 339 bits (734), Expect(2) = e-115
Identities = 141/226 (62%), Positives = 175/226 (77%)
Frame = +3 / +1
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 136 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 315
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 316 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 495
Query: 1113 LAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSL 1292
AG+DMIMVP Y FI LT V + +IPMSRI+DAV RIL+VKFTMGLFE+P DPSL
Sbjct: 496 GAGIDMIMVPCAYTEFIDDLTYQVKNNIIPMSRINDAVYRILKVKFTMGLFESPYADPSL 675
Query: 1293 ADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARILV 1430
+LGKQEHRDLAREA ++ + + + K ++ PKKA +IL+
Sbjct: 676 IGELGKQEHRDLAREAGKEVIGVAEKRKNCLPLIVGFPKKAGKILL 813
Score = 249 bits (539), Expect(3) = 8e-072
Identities = 126/223 (56%), Positives = 140/223 (62%)
Frame = -2 / -1
Query: 1426 RILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVN 1247
RIL AF G+ + F ++ ASRARS CSCFPS RLGS G SNRPMVN
Sbjct: 809 RILPAFFGKPTMSGRQFFLFSATPMTSLPASRARSRCSCFPSSPMRLGSA*GLSNRPMVN 630
Query: 1246 LTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGL 1067
T RI TAS ILL+G+ T VR M * GTMIMS PA A TE*E*F PGGL
Sbjct: 629 FTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AQGTMIMSIPAPTPASTE*E*FTPGGL 450
Query: 1066 VTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMW 887
V SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL *AG+W
Sbjct: 449 VIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLMIEL**AGIW 270
Query: 886 MLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
++I P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 269 IVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 141
Score = 99.1 bits (210), Expect(2) = e-115
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3 / +1
Query: 615 AFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
AFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 1 AFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDVP 129
Score = 78.5 bits (165), Expect(3) = 3e-023
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = -1 / -3
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
EA V G L+ HGE +NP +VD AH D +++ Q +E V +HDHV
Sbjct: 675 EAWVSIGALK*THGEFHLENPVDSIVDSAHGDDVVLNLVCQIINEFCVGTRNHDHVNTGT 496
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPI 1041
N SL+ + +V WRA +P++ALP+
Sbjct: 495 NSSLN*IRIVHAWRASNPINALPV 424
Score = 46.9 bits (96), Expect(3) = 3e-023
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -3
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 375 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 259
Score = 34.1 bits (68), Expect(3) = 8e-072
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGA 620
RPHLGS HTA+HGA
Sbjct: 47 RPHLGSLHTAIHGA 6
Score = 27.6 bits (54), Expect(3) = 8e-072
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 128 GTSPCRPEMSVVIDWT 81
Score = 22.1 bits (42), Expect(3) = 3e-023
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -2
Query: 1029 SPGS*ACP*GSL**GCGWRAF 967
+P *AC + * G GWRAF
Sbjct: 412 NPEI*ACSSENQ*QGNGWRAF 350
>gb|BU999528.1|BU999528 HI14M13r HI Hordeum vulgare subsp. vulgare cDNA clone HI14M13
5-PRIME, mRNA sequence
Length = 607
Score = 396 bits (858), Expect = e-109
Identities = 161/197 (81%), Positives = 174/197 (88%)
Frame = +3 / +3
Query: 333 YIXXXXXXXXXVPRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATI 512
+I VPRK ATA EW MV FQKAC+STRLGIPMIYGIDAVHG NNVYGATI
Sbjct: 15 FIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATI 194
Query: 513 FPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHR 692
FPHNVGLGATRDP LVKRIG ATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSED R
Sbjct: 195 FPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRR 374
Query: 693 IVQAMTELIPGLQGDVPQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQ 872
IVQ+MTELIPGLQGDVP++FTSGMPF AGK+KVAACAKHFVGDGGT +GINENNTII+R+
Sbjct: 375 IVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINRE 554
Query: 873 GLISIHMPAYLDALRKG 923
GL++IHMPAY +A+ KG
Sbjct: 555 GLMNIHMPAYKNAMDKG 605
Score = 334 bits (724), Expect = 1e-090
Identities = 143/186 (76%), Positives = 148/186 (79%)
Frame = -2 / -1
Query: 922 PLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMPLVKFC 743
PL A AGMWM IRP R MMVLFSLMP VPPSPTKC AHAATL FPA KGMPLVK
Sbjct: 604 PLSMAFLYAGMWMFIRPSRLMMVLFSLMPSTVPPSPTKCFAHAATLFFPATKGMPLVKSL 425
Query: 742 GTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPIL 563
GTSPCRPGMSSVM CTIR *HRPHLGS HTAM GA AYWMPVALTSSAVA+PIL
Sbjct: 424 GTSPCRPGMSSVMDCTIRRSSL*LS*HRPHLGSLHTAMQGAKAYWMPVALTSSAVASPIL 245
Query: 562 FTRFGSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVDRHAFWKSLTMATHSAAV 383
FTR+GS VAPRPTLWGK+VAP TL WPWTASMP*I+GMP RVD AFWK TM+ HS AV
Sbjct: 244 FTRYGSRVAPRPTLWGKIVAP*TLFWPWTASMP*IMGMPSRVDMQAFWKPSTMSCHSLAV 65
Query: 382 ACFRGT 365
A RGT
Sbjct: 64 APLRGT 47
Score = 139 bits (298), Expect(2) = 2e-033
Identities = 69/130 (53%), Positives = 78/130 (60%)
Frame = -1 / -3
Query: 923 ALAERVQVGRHVDAYQXXXXXXXXXXXXXXXXATVADEVLGARRDLVLSGGEGHAAGEVL 744
AL V V RHVD +Q A VA ++L A LVLSG EGHAAGEVL
Sbjct: 605 ALVHGVLVRRHVDVHQALTVDDGVVLVDAVHRAAVAHKMLRACSHLVLSGDEGHAAGEVL 426
Query: 743 RDVALQARDELSHGLHDTXXXXXXXXXXXXPRITAHRNAWRERVLDAGGSHFKRGRGADP 564
DVALQA DEL HGLHD RI+AHR+A RE VLDAGGS F+RG ADP
Sbjct: 425 GDVALQAGDELRHGLHDPAILAVALIAPPPSRISAHRDARREGVLDAGGSDFERGGLADP 246
Query: 563 LHQVWIPGGS 534
LH+V +PGG+
Sbjct: 245 LHEVRVPGGA 216
Score = 92.3 bits (195), Expect(2) = 7e-022
Identities = 43/77 (55%), Positives = 46/77 (59%)
Frame = +2 / +2
Query: 539 HQGSKPGEXXXXXXXXXXXXXXXPVRVRAMHCGVP*SEVGPVLRELQRGPPYRAGHD*AH 718
H G P E PVR+RA+H GV SE+G VL ELQRG P RA HD AH
Sbjct: 221 HPGPVPREEDRRGHRARSQSHRHPVRLRALHRGVQRSEMGAVL*ELQRGSPDRAVHDGAH 400
Query: 719 PGPAGRRPAELHQRHAL 769
P PAGRRP LHQRHAL
Sbjct: 401 PRPAGRRPQGLHQRHAL 451
Score = 33.1 bits (66), Expect(2) = 7e-022
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 866 PAGPDKHPHAGLPGRAPQG 922
P GPD+HPHAG+ R QG
Sbjct: 548 P*GPDEHPHAGVQERHGQG 604
Score = 24.4 bits (47), Expect(2) = 2e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1 / -3
Query: 452 DAEARGQARLLEVADH 405
DAE RG A LLE H
Sbjct: 134 DAEPRGHAGLLEAVHH 87
>gb|BQ460323.1|BQ460323 HA06J20r HA Hordeum vulgare subsp. vulgare cDNA clone HA06J20
5-PRIME, mRNA sequence
Length = 634
Score = 232 bits (500), Expect(2) = e-106
Identities = 94/104 (90%), Positives = 97/104 (93%)
Frame = +3 / +2
Query: 432 LSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQ 611
LSTRLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRDP LVKRIG ATALEVRATGI
Sbjct: 11 LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPMLVKRIGEATALEVRATGIP 190
Query: 612 YAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 191 YAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDVP 322
Score = 177 bits (380), Expect(2) = e-106
Identities = 68/102 (66%), Positives = 83/102 (81%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 329 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 508
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGID 1058
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GID
Sbjct: 509 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGID 634
Score = 134 bits (287), Expect(3) = 3e-067
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = -2 / -2
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 240 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 61
Query: 481 WTASMP*IIGMPRRVD 434
TAS+P*IIGMPRRV+
Sbjct: 60 CTASIP*IIGMPRRVE 13
Score = 134 bits (287), Expect(3) = 3e-067
Identities = 60/100 (60%), Positives = 68/100 (68%)
Frame = -2 / -2
Query: 1057 SMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLI 878
SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL *AG+W++I
Sbjct: 633 SMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLMIEL**AGIWIVI 454
Query: 877 RPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 453 SPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 334
Score = 27.6 bits (54), Expect(3) = 3e-067
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 321 GTSPCRPEMSVVIDWT 274
>gb|BQ459096.1|BQ459096 HA02F14r HA Hordeum vulgare subsp. vulgare cDNA clone HA02F14
5-PRIME, mRNA sequence
Length = 628
Score = 256 bits (554), Expect(2) = e-101
Identities = 104/125 (83%), Positives = 111/125 (88%)
Frame = +3 / +3
Query: 369 PRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRD 548
P QA+AA W +MV++ QK LSTRLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRD
Sbjct: 12 PSPQASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRD 191
Query: 549 PNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGL 728
P LVKRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GL
Sbjct: 192 PMLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGL 371
Query: 729 QGDVP 743
QGDVP
Sbjct: 372 QGDVP 386
Score = 143 bits (307), Expect(3) = 3e-061
Identities = 67/94 (71%), Positives = 74/94 (78%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 304 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 125
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVA 380
TAS+P*IIGMPRRV+R F S T+ +AA A
Sbjct: 124 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA 23
Score = 134 bits (288), Expect(2) = e-101
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +3 / +3
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 393 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 572
Query: 933 VMISYSSWNGLKMHANH 983
VM SYSSWNG KMHANH
Sbjct: 573 VMTSYSSWNGKKMHANH 623
Score = 105 bits (223), Expect(3) = 3e-061
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = -2 / -1
Query: 988 RLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTK 809
R WLACI PFQLE E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT
Sbjct: 628 RKWLACIFLPFQLEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT* 449
Query: 808 CLAHAATLSFPAAKGMP 758
C AHAAT P G+P
Sbjct: 448 CFAHAATFLLPPTYGLP 398
Score = 27.6 bits (54), Expect(3) = 3e-061
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 385 GTSPCRPEMSVVIDWT 338
>gb|AL503553.1|AL503553 AL503553 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02J07T 5', mRNA sequence
Length = 700
Score = 343 bits (744), Expect(3) = e-100
Identities = 143/201 (71%), Positives = 165/201 (82%)
Frame = +3 / +3
Query: 819 DGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITG 998
DGGT GINEN+TIID GL++IHMPAY +++ +G STVM SYSSWNG KMHANH L+T
Sbjct: 3 DGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHANHFLVTD 182
Query: 999 FLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTG 1178
FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A + AG+DMIMVP Y FI LT
Sbjct: 183 FLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEFIDDLTY 362
Query: 1179 HVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLV 1358
V + +IPMSRI+DAV RILRVKFTMGLFE+P DPSL +LGKQEHRDLAREAVRKSLV
Sbjct: 363 QVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEHRDLAREAVRKSLV 542
Query: 1359 LLKNGKPGDAPLLPLPKKAAR 1421
LLKNGK PLLPLPKKA +
Sbjct: 543 LLKNGKSASTPLLPLPKKAGK 605
Score = 246 bits (532), Expect(2) = 6e-071
Identities = 121/201 (60%), Positives = 134/201 (66%)
Frame = -2 / -1
Query: 1420 LAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLT 1241
L AF GRG++G PF S+T+D TASRARS CSCFPS RLGS G SNRPMVN T
Sbjct: 604 LPAFFGRGNNGVEADFPFFSNTNDFLTASRARSRCSCFPSSPTRLGSA*GLSNRPMVNFT 425
Query: 1240 RRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVT 1061
RI TAS ILL+G+ T VR M * GTMIMS PA A TE*E*F PGGLV
Sbjct: 424 LRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMIMSIPAPTPASTE*E*FTPGGLVI 245
Query: 1060 LSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWML 881
SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL *AG+W++
Sbjct: 244 RSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLMIEL**AGIWIV 65
Query: 880 IRPCRSMMVLFSLMPFCVPPS 818
I P SM+V FSL+P VPPS
Sbjct: 64 ISPWASMIVSFSLIPINVPPS 2
Score = 79.4 bits (167), Expect(4) = 3e-025
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = -1 / -3
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
EA V G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV
Sbjct: 476 EAWVSIGALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGT 297
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPI 1041
N SL+ + +V WRA +P++ALP+
Sbjct: 296 NSSLN*IRIVHAWRASNPINALPV 225
Score = 46.9 bits (96), Expect(4) = 3e-025
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -3
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 176 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 60
Score = 43.2 bits (88), Expect(2) = 6e-071
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 1468 PHWYPRLSAWLPATRILAAFL 1406
PHW P+ SAWLPATRIL L
Sbjct: 653 PHWLPKSSAWLPATRILTGLL 591
Score = 40.0 bits (81), Expect(3) = e-100
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / +1
Query: 1407 KKAARILVAGSHADNLGYQCG 1469
++ RILVAGSHAD+LG QCG
Sbjct: 592 RRPVRILVAGSHADDLGNQCG 654
Score = 31.8 bits (63), Expect(4) = 3e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 1472 PAALVPQVVGVAPCDQDP 1419
P ALV QVVGVA D+DP
Sbjct: 657 PPALVAQVVGVASSDEDP 604
Score = 23.5 bits (45), Expect(3) = e-100
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3 / +2
Query: 1467 GGWTIEWQGD 1496
GGWTI W D
Sbjct: 653 GGWTITWPRD 682
Score = 22.1 bits (42), Expect(4) = 3e-025
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -2
Query: 1029 SPGS*ACP*GSL**GCGWRAF 967
+P *AC + * G GWRAF
Sbjct: 213 NPEI*ACSSENQ*QGNGWRAF 151
>gb|CA021153.1|CA021153 HZ39E06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39E06
5-PRIME, mRNA sequence
Length = 642
Score = 300 bits (649), Expect(2) = e-100
Identities = 121/167 (72%), Positives = 137/167 (82%)
Frame = +3 / +1
Query: 276 GQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQATAAEWVAMVSDFQKACLSTRLGIP 455
GQMTQIER VAS +++Y+I VP QAT A WV MV++FQK L+TRLGIP
Sbjct: 10 GQMTQIERSVASADIMKNYFIGSILSGGGSVPAPQATPAMWVNMVNEFQKGALATRLGIP 189
Query: 456 MIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIA 635
MIYGIDAVHG+NNVY ATIFPHNVGLGATRDP+LVKRIG ATALEVRATGI Y FAPCIA
Sbjct: 190 MIYGIDAVHGNNNVYNATIFPHNVGLGATRDPDLVKRIGEATALEVRATGIPYTFAPCIA 369
Query: 636 VCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVPQNFTSGMPFAA 776
VCRDPRWGRCYESYSEDH+IVQ MT++I GLQG++P N T G+P+ A
Sbjct: 370 VCRDPRWGRCYESYSEDHKIVQQMTDIILGLQGEIPVNHTKGVPYVA 510
Score = 183 bits (394), Expect(3) = 2e-061
Identities = 90/143 (62%), Positives = 96/143 (67%)
Frame = -2 / -2
Query: 793 ATLSFPAAKGMPLVKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANA 614
A F A G PLV F G SPCRP + SV+ TI W *HRPHLGS TAMHGA
Sbjct: 527 AATLFLAT*GTPLV*FTGISPCRPRIISVIC*TILWSSL*LS*HRPHLGSLQTAMHGAKV 348
Query: 613 YWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIGMPRRVD 434
Y MPVA TS AVA+PILFTR GSLVAP PTL G MVA TLL P TAS+P*IIG+PRRV
Sbjct: 347 YGMPVARTSRAVASPILFTRSGSLVAPSPTL*GNMVAL*TLLLP*TASIP*IIGIPRRVA 168
Query: 433 RHAFWKSLTMATHSAAVACFRGT 365
+ FW S TM TH A VA GT
Sbjct: 167 KAPFWNSFTMLTHIAGVA*GAGT 99
Score = 86.8 bits (183), Expect(2) = e-100
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3 / +1
Query: 780 KDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDA 911
K+KVAA AKHFVGDGGT NGINENNTIID GL+ IHMP Y D+
Sbjct: 511 KNKVAAXAKHFVGDGGTHNGINENNTIIDEHGLLGIHMPPYYDS 642
Score = 62.5 bits (130), Expect(3) = 2e-061
Identities = 27/37 (72%), Positives = 29/37 (78%)
Frame = -2 / -2
Query: 895 GMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATL 785
GM M PC SM+VLFSL+P VPPSPTKCLA AATL
Sbjct: 626 GM*MPSSPCSSMIVLFSLIPL*VPPSPTKCLAQAATL 516
Score = 30.9 bits (61), Expect(3) = 2e-061
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 310 DATIRSICVIWPT 272
DAT RSICVIWP+
Sbjct: 44 DATERSICVIWPS 6
>gb|AL509036.1|AL509036 AL509036 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10I14V 5',
mRNA sequence
Length = 700
Score = 235 bits (508), Expect(3) = 1e-099
Identities = 92/137 (67%), Positives = 111/137 (81%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 221 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 400
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 401 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 580
Query: 1113 LAGLDMIMVPNNYQNFI 1163
AG+DMIMVP Y FI
Sbjct: 581 GAGIDMIMVPFAYTEFI 631
Score = 172 bits (370), Expect(3) = 5e-059
Identities = 80/128 (62%), Positives = 88/128 (68%)
Frame = -2 / -2
Query: 1141 GTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILS 962
GTMIMS PA A TE*E*F PGGLV SMP QSEI KP LSL RK V R WLACI
Sbjct: 609 GTMIMSIPAPTPASTE*E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFL 430
Query: 961 PFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLS 782
PFQLE E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT
Sbjct: 429 PFQLEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFL 250
Query: 781 FPAAKGMP 758
P G+P
Sbjct: 249 LPPTYGLP 226
Score = 142 bits (305), Expect(3) = 1e-099
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +3 / +2
Query: 537 ATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTEL 716
A DP LVKRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT L
Sbjct: 8 ARGDPMLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTL 187
Query: 717 IPGLQGDVP 743
I GLQGDVP
Sbjct: 188 ISGLQGDVP 214
Score = 68.4 bits (143), Expect(3) = 5e-059
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -2 / -2
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGS 545
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GS
Sbjct: 132 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGS 16
Score = 27.6 bits (54), Expect(3) = 5e-059
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 213 GTSPCRPEMSVVIDWT 166
Score = 26.7 bits (52), Expect(3) = 1e-099
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 1152 QNFITILTGHVNSGLIPMSR 1211
QN + ILT V + +IPMSR
Sbjct: 621 QNSLMILTYQVKNNIIPMSR 680
>gb|AL505489.1|AL505489 AL505489 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08K03V 5', mRNA sequence
Length = 690
Score = 262 bits (566), Expect(3) = 2e-098
Identities = 107/138 (77%), Positives = 115/138 (83%)
Frame = +3 / +1
Query: 330 YYIXXXXXXXXXVPRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGAT 509
Y+I VP QA+AA W +MV++ QK LSTRLGIPMIYGIDAVHGHNNVY AT
Sbjct: 13 YFIGSVLSGGGSVPSPQASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHGHNNVYKAT 192
Query: 510 IFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDH 689
IFPHNVGLGATRDP LVKRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYESYSED
Sbjct: 193 IFPHNVGLGATRDPMLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDP 372
Query: 690 RIVQAMTELIPGLQGDVP 743
++VQ+MT LI GLQGDVP
Sbjct: 373 KVVQSMTTLISGLQGDVP 426
Score = 146 bits (313), Expect(4) = 9e-058
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -2
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 344 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLLXP 165
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 164 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 48
Score = 92.7 bits (196), Expect(3) = 2e-098
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +3 / +1
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKG 923
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G
Sbjct: 433 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRG 603
Score = 69.3 bits (145), Expect(4) = 9e-058
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 922 PLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 602 PLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 438
Score = 46.0 bits (94), Expect(3) = 2e-098
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3 / +2
Query: 927 STVMISYSSWNGLKMHANHNL 989
STVM SYSSWNG KMHANH L
Sbjct: 608 STVMTSYSSWNGKKMHANHFL 670
Score = 39.1 bits (79), Expect(4) = 9e-058
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2 / -1
Query: 988 RLWLACILSPFQLE*EIMTVE 926
R WLACI PFQLE E++TVE
Sbjct: 669 RKWLACIFLPFQLEYEVITVE 607
Score = 27.6 bits (54), Expect(4) = 9e-058
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 425 GTSPCRPEMSVVIDWT 378
>gb|BQ766906.1|BQ766906 EBro08_SQ007_O10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_O10 5', mRNA sequence
Length = 646
Score = 264 bits (572), Expect(2) = 2e-098
Identities = 108/143 (75%), Positives = 118/143 (82%)
Frame = +3 / +2
Query: 315 QALRDYYIXXXXXXXXXVPRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNN 494
+A+ Y+I VP QA+AA W +MV++ QK LSTRLGIPMIYGIDAVHGHNN
Sbjct: 5 EAMSKYFIGSVLSGGGSVPSPQASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHGHNN 184
Query: 495 VYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYES 674
VY ATIFPHNVGLGATRDP LVKRIG ATALEVRATGI YAFAPCIAVCRDPRWGRCYES
Sbjct: 185 VYKATIFPHNVGLGATRDPMLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYES 364
Query: 675 YSEDHRIVQAMTELIPGLQGDVP 743
YSED ++VQ+MT LI GLQGDVP
Sbjct: 365 YSEDPKVVQSMTTLISGLQGDVP 433
Score = 145 bits (311), Expect(3) = 2e-056
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -2
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 351 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 172
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 171 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 55
Score = 116 bits (248), Expect(2) = 2e-098
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 440 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 619
Query: 933 VMISYSSWN 959
VM SYSSWN
Sbjct: 620 VMTSYSSWN 646
Score = 86.8 bits (183), Expect(3) = 2e-056
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = -2 / -2
Query: 958 FQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSF 779
FQLE E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT
Sbjct: 645 FQLEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLL 466
Query: 778 PAAKGMP 758
P G+P
Sbjct: 465 PPTYGLP 445
Score = 27.6 bits (54), Expect(3) = 2e-056
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 432 GTSPCRPEMSVVIDWT 385
>gb|BI955317.1|BI955317 HVSMEm0022I03f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0022I03f, mRNA sequence
Length = 666
Score = 355 bits (769), Expect = 6e-097
Identities = 139/181 (76%), Positives = 163/181 (90%)
Frame = +3 / +3
Query: 582 ALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVPQNFTSG 761
ALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSED RIVQ+MTELIPGLQGDVP++ TSG
Sbjct: 3 ALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDLTSG 182
Query: 762 MPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMI 941
MPF AGK+KVAACAKHFVGDGGT +GINENNTII+R+GL++IHMPAY +A+ KG STVMI
Sbjct: 183 MPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGVSTVMI 362
Query: 942 SYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAG 1121
SYSSWNG+KMHAN +L+TG+LKD L ++GF I +WEG+DR+T+P G++YSYS + L G
Sbjct: 363 SYSSWNGVKMHANQDLVTGYLKDPLQYKGFVILNWEGLDRITTPAGSDYSYSDRLPFLPG 542
Query: 1122 L 1124
L
Sbjct: 543 L 545
Score = 283 bits (612), Expect = 3e-075
Identities = 129/181 (71%), Positives = 136/181 (75%)
Frame = -2 / -3
Query: 1123 RPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE* 944
+P + + +E*E* P G+V LS PSQ +I KP S SLR PV R WLACIL+PFQLE*
Sbjct: 544 KPGKNGSLSE*E*SDPAGVVILSRPSQFKITKPLY*SGSLRYPVTRSWLACILTPFQLE* 365
Query: 943 EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKG 764
EIMTVE PL A AGMWM IRP R MMVLFSLMP VPPSPTKC AHAATL FPA KG
Sbjct: 364 EIMTVETPLSMAFLYAGMWMFIRPSRLMMVLFSLMPSTVPPSPTKCFAHAATLFFPATKG 185
Query: 763 MPLVKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSS 584
MPLVK GTSPCRPGMSSVM CTIR *HRPHLGS HTAM GA AYWMPVALTSS
Sbjct: 184 MPLVKSLGTSPCRPGMSSVMDCTIRRSSL*LS*HRPHLGSLHTAMQGAKAYWMPVALTSS 5
Query: 583 A 581
A
Sbjct: 4 A 2
Score = 195 bits (421), Expect = 7e-049
Identities = 93/172 (54%), Positives = 104/172 (60%)
Frame = -1 / -2
Query: 1097 RVGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEAL 918
RVGVVR R GDPV ALP+ D DEV+VGVH +PVPAGVGDHDGG+AL
Sbjct: 518 RVGVVRSGRGGDPVKALPV*DHEALVLKRVLEVSGDEVLVGVHLDPVPAGVGDHDGGDAL 339
Query: 917 AERVQVGRHVDAYQXXXXXXXXXXXXXXXXATVADEVLGARRDLVLSGGEGHAAGEVLRD 738
V V RHVD +Q A VA ++L A LVLSG EGHAAG+VL D
Sbjct: 338 VHGVLVRRHVDVHQALTVDDGVVLVDAVHRAAVAHKMLRACSHLVLSGDEGHAAGQVLGD 159
Query: 737 VALQARDELSHGLHDTXXXXXXXXXXXXPRITAHRNAWRERVLDAGGSHFKR 582
VALQA DEL HGLHD RI+AHR+A RE VLDAGGSHF+R
Sbjct: 158 VALQAGDELRHGLHDPAILAVALIAPPPSRISAHRDARREGVLDAGGSHFER 3
Score = 84.5 bits (178), Expect(3) = 3e-032
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = +2 / +2
Query: 608 PVRVRAMHCGVP*SEVGPVLRELQRGPPYRAGHD*AHPGPAGRRPAELHQRHAL 769
PVR+RA+H GV SE+G VL ELQRG P RA HD AHP PAGRRP L QRHAL
Sbjct: 29 PVRLRALHRGVQRSEMGAVL*ELQRGSPDRAVHDGAHPRPAGRRPQGLDQRHAL 190
Score = 65.2 bits (136), Expect(3) = 3e-032
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +2
Query: 866 PAGPDKHPHAGLPGRAPQGXXXXXXXXXXXERAQNARQPQPHHRLPQGQA 1015
P GPD+HPHAG+ R QG ER Q+ARQP+P HR+PQG A
Sbjct: 287 P*GPDEHPHAGVQERHGQGRLHRHDLLLQLERGQDARQPRPRHRIPQGPA 436
Score = 28.6 bits (56), Expect(3) = 3e-032
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 1045 GRASTGSPALQGRTTPT 1095
GRA TGSP L TTPT
Sbjct: 466 GRALTGSPPLPDLTTPT 516
>gb|BU976238.1|BU976238 HA03G04r HA Hordeum vulgare subsp. vulgare cDNA clone HA03G04
5-PRIME, mRNA sequence
Length = 641
Score = 263 bits (568), Expect(2) = 9e-097
Identities = 106/161 (65%), Positives = 128/161 (79%)
Frame = +3 / +1
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 157 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 336
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 337 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 516
Query: 1113 LAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRI 1235
AG+DMIMVP Y FI LT V + +IPMSRI+DAV RI
Sbjct: 517 GAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRI 639
Score = 187 bits (402), Expect(3) = 5e-055
Identities = 94/160 (58%), Positives = 104/160 (65%)
Frame = -2 / -1
Query: 1237 RIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTL 1058
RI TAS ILL+G+ T VR M * GTMIMS PA A TE*E*F PGGLV
Sbjct: 641 RIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMIMSIPAPTPASTE*E*FTPGGLVIR 462
Query: 1057 SMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLI 878
SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL *AG+W++I
Sbjct: 461 SMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLMIEL**AGIWIVI 282
Query: 877 RPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 281 SPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 162
Score = 112 bits (240), Expect(2) = 9e-097
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +3 / +1
Query: 594 RATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
RATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 1 RATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDVP 150
Score = 40.5 bits (82), Expect(3) = 5e-055
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGANAYWMPVA 596
RPHLGS HTA+HGA A +PVA
Sbjct: 68 RPHLGSLHTAIHGAKA*GIPVA 3
Score = 27.6 bits (54), Expect(3) = 5e-055
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 149 GTSPCRPEMSVVIDWT 102
>gb|AL508845.1|AL508845 AL508845 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09P15V 5',
mRNA sequence
Length = 700
Score = 330 bits (715), Expect(2) = 5e-095
Identities = 131/170 (77%), Positives = 153/170 (90%)
Frame = +3 / +1
Query: 693 IVQAMTELIPGLQGDVPQNFTSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQ 872
+ MTELIPGLQGDVP++FTSGMPF AGK+KVAACAKHFVGDGGT +GINENNTII+R+
Sbjct: 1 LTXGMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINRE 180
Query: 873 GLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEG 1052
GL++IHMPAY +A+ KG STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF ISDWEG
Sbjct: 181 GLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEG 360
Query: 1053 IDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIP 1202
IDR+T+P G++YSYSV+ASILAGLDMIMVPNNYQ FI+ILTGHVN G P
Sbjct: 361 IDRITTPAGSDYSYSVKASILAGLDMIMVPNNYQQFISILTGHVNGGRHP 510
Score = 282 bits (610), Expect(3) = 3e-081
Identities = 127/166 (76%), Positives = 132/166 (79%)
Frame = -2 / -3
Query: 1201 GIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPW 1022
G RP T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP
Sbjct: 509 G*RPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPL 330
Query: 1021 KLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSL 842
LS+SLR PV R WLACIL+PFQLE*EIMTVE PL A AGMWM IRP R MMVLFSL
Sbjct: 329 NLSVSLRYPVTRSWLACILTPFQLE*EIMTVETPLSMAFLYAGMWMFIRPSRLMMVLFSL 150
Query: 841 MPFCVPPSPTKCLAHAATLSFPAAKGMPLVKFCGTSPCRPGMSSVM 704
MP VPPSPTKC AHAATL FPA KGMPLVK GTSPCRPGMSSVM
Sbjct: 149 MPSTVPPSPTKCFAHAATLFFPATKGMPLVKSLGTSPCRPGMSSVM 12
Score = 199 bits (429), Expect(3) = 2e-055
Identities = 94/163 (57%), Positives = 104/163 (63%)
Frame = -1 / -2
Query: 1193 AAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHRVGVVRPWRAGDPVDALPIRDXXXXXXX 1014
AAV + QD DE+LVVV HHDHVKA KN SL RVGVVR R GDPV+ALP+ D
Sbjct: 501 AAVDMAGQDADELLVVVRHHDHVKAGKNGSLDRVGVVRSGRGGDPVNALPV*DHEALEFE 322
Query: 1013 XXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQXXXXXXXXXXXXXX 834
DEV+VGVH +PVPAGVGDHDGG+AL V V RHVD +Q
Sbjct: 321 RVLEVSGDEVLVGVHLDPVPAGVGDHDGGDALVHGVLVRRHVDVHQALTVDDGVVLVDAV 142
Query: 833 XXATVADEVLGARRDLVLSGGEGHAAGEVLRDVALQARDELSH 705
A VA ++L A LVLSG EGHAAGEVL DVALQA DEL H
Sbjct: 141 HRAAVAHKMLRACSHLVLSGDEGHAAGEVLGDVALQAGDELRH 13
Score = 65.7 bits (137), Expect(4) = 5e-034
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 866 PAGPDKHPHAGLPGRAPQGXXXXXXXXXXXERAQNARQPQPHHRLPQGQA 1015
P GPD+HPHAG+ R QG ER Q+ARQP+P HR+PQG A
Sbjct: 174 P*GPDEHPHAGVQERHGQGRLHRHDLLLQLERGQDARQPRPRHRIPQGHA 323
Score = 59.3 bits (123), Expect(4) = 5e-034
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 1070 PSRGELLLLCAGFDSCWP*HDHGAQQLPKLHHHPD 1174
P R LLLL GF SC P*HDHGA+QLP +H HPD
Sbjct: 378 PCRI*LLLLGQGFHSCRP*HDHGAEQLPAVHQHPD 482
Score = 46.9 bits (96), Expect(4) = 5e-034
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 704 HD*AHPGPAGRRPAELHQRHAL 769
HD AHP PAGRRP LHQRHAL
Sbjct: 12 HDGAHPRPAGRRPQGLHQRHAL 77
Score = 39.6 bits (80), Expect(2) = 5e-095
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3 / +2
Query: 1188 SGLIPMSRIDDAVTRILRVKFTMGLFENPM 1277
+ +IPMSRIDDAVTRILR + G P+
Sbjct: 497 AAVIPMSRIDDAVTRILRGQVHHGSLREPL 586
Score = 33.1 bits (66), Expect(3) = 3e-081
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 1247 LDAQNPSHGVVDPAHRD 1197
L Q+P HG+VDPAH D
Sbjct: 556 LTXQDPGHGIVDPAHGD 506
Score = 30.4 bits (60), Expect(3) = 2e-055
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -2 / -2
Query: 1240 RRIRVTASSILLIGI 1196
RRIRVTASSILL+G+
Sbjct: 549 RRIRVTASSILLMGM 505
Score = 29.9 bits (59), Expect(4) = 5e-034
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 1242 VKFTMGLFENP 1274
VKFTMGLFENP
Sbjct: 552 VKFTMGLFENP 584
Score = 27.6 bits (54), Expect(3) = 3e-081
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 1289 AGVRHGVLEQAHGELD 1242
AG GVLE+ HGELD
Sbjct: 599 AGSAVGVLEETHGELD 552
Score = 26.7 bits (52), Expect(3) = 2e-055
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 1273 GFSNRPMVNLT 1241
GFS RPMVNLT
Sbjct: 583 GFSKRPMVNLT 551
>gb|BQ462564.1|BQ462564 HI01E18T HI Hordeum vulgare subsp. vulgare cDNA clone HI01E18
5-PRIME, mRNA sequence
Length = 596
Score = 322 bits (697), Expect(2) = 4e-094
Identities = 131/162 (80%), Positives = 148/162 (91%)
Frame = +3 / +2
Query: 891 MPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTS 1070
MPAY +A+ KG STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF ISDWEGIDR+T+
Sbjct: 41 MPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT 220
Query: 1071 PPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKF 1250
P G++YSYSV+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRIDDAVTRILRVKF
Sbjct: 221 PAGSDYSYSVKASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKF 400
Query: 1251 TMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
TMGL ENP DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 401 TMGLLENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 526
Score = 254 bits (550), Expect(2) = 4e-073
Identities = 119/162 (73%), Positives = 127/162 (78%)
Frame = -2 / -3
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
LPF SSTSD AS A+SLCSCFPS SA GS GFS RPMVNLTRRIRVTASSILL+G+
Sbjct: 525 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMVNLTRRIRVTASSILLMGM 346
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP L
Sbjct: 345 TPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPLNL 166
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGM 890
S+SLR PV R WLACIL+PFQLE*EIMTVE PL A AGM
Sbjct: 165 SVSLRYPVTRSWLACILTPFQLE*EIMTVETPLSMAFLYAGM 40
Score = 188 bits (406), Expect = 8e-047
Identities = 80/128 (62%), Positives = 90/128 (70%)
Frame = -1 / -2
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVL + HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN SL R
Sbjct: 424 GVL*ETHGELDPQDPGHGIVDPAHGDDAAVDMAGQDADELLVVVRHHDHVKAGKNGSLDR 245
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALA 915
VGVVR R GDPV+ALP+ D DEV+VGVH +PVPAGVGDHDGG+AL
Sbjct: 244 VGVVRSGRGGDPVNALPV*DHEALEFERVLEVSGDEVLVGVHLDPVPAGVGDHDGGDALV 65
Query: 914 ERVQVGRH 891
V V RH
Sbjct: 64 HGVLVRRH 41
Score = 45.1 bits (92), Expect(2) = 4e-094
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3 / +2
Query: 1383 DAPLLPLPKKAARILVAGSH 1442
DAPLLPLPKKA +ILVAGSH
Sbjct: 536 DAPLLPLPKKAPKILVAGSH 595
Score = 42.3 bits (86), Expect(2) = 4e-073
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -2 / -3
Query: 1441 WLPATRILAAFLGRGSSGAS 1382
WLPATRIL AFLG G SGAS
Sbjct: 594 WLPATRILGAFLGSGRSGAS 535
>gb|BQ462668.1|BQ462668 HI01K09T HI Hordeum vulgare subsp. vulgare cDNA clone HI01K09
5-PRIME, mRNA sequence
Length = 551
Score = 343 bits (743), Expect = 3e-093
Identities = 139/173 (80%), Positives = 160/173 (92%)
Frame = +3 / +3
Query: 855 TIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFT 1034
TII+R+GL++IHMPAY +A+ KG STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF
Sbjct: 6 TIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFV 185
Query: 1035 ISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRI 1214
ISDWEGIDR+T+P G++YSYSV+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRI
Sbjct: 186 ISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRI 365
Query: 1215 DDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNG 1373
DDAVTRILRVKFTMGLFENP DP++A+QLGKQEHRDLAREA RKSLVLLKNG
Sbjct: 366 DDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNG 524
Score = 273 bits (591), Expect = 2e-072
Identities = 126/174 (72%), Positives = 135/174 (77%)
Frame = -2 / -2
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
+PF SST D AS A+SLCSCFPS SA GS GFS RPMVNLTRRIRVTASSILL+G+
Sbjct: 526 IPFFSSTRDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMVNLTRRIRVTASSILLMGM 347
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP L
Sbjct: 346 TPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPLNL 167
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMV 854
S+SLR PV R WLACIL+PFQLE*EIMTVE PL A AGMWM IRP R MMV
Sbjct: 166 SVSLRYPVTRSWLACILTPFQLE*EIMTVETPLSMAFLYAGMWMFIRPSRLMMV 5
Score = 200 bits (432), Expect = 2e-050
Identities = 84/133 (63%), Positives = 95/133 (71%)
Frame = -1 / -1
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVLE+ HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN SL R
Sbjct: 425 GVLEETHGELDPQDPGHGIVDPAHGDDAAVDMAGQDADELLVVVRHHDHVKAGKNGSLDR 246
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALA 915
VGVVR R GDPV+ALP+ D DEV+VGVH +PVPAGVGDHDGG+AL
Sbjct: 245 VGVVRSGRGGDPVNALPV*DHEALEFERVLEVSGDEVLVGVHLDPVPAGVGDHDGGDALV 66
Query: 914 ERVQVGRHVDAYQ 876
V V RHVD +Q
Sbjct: 65 HGVLVRRHVDVHQ 27
Score = 65.7 bits (137), Expect(3) = 7e-027
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +2
Query: 866 PAGPDKHPHAGLPGRAPQGXXXXXXXXXXXERAQNARQPQPHHRLPQGQA 1015
P GPD+HPHAG+ R QG ER Q+ARQP+P HR+PQG A
Sbjct: 17 P*GPDEHPHAGVQERHGQGRLHRHDLLLQLERGQDARQPRPRHRIPQGHA 166
Score = 59.3 bits (123), Expect(3) = 7e-027
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +2 / +2
Query: 1070 PSRGELLLLCAGFDSCWP*HDHGAQQLPKLHHHPD 1174
P R LLLL GF SC P*HDHGA+QLP +H HPD
Sbjct: 221 PCRI*LLLLGQGFHSCRP*HDHGAEQLPAVHQHPD 325
Score = 35.0 bits (70), Expect(3) = 7e-027
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 1222 P*LGFCASSSPWACSRTPCRT 1284
P* G C SSSPW SRTP T
Sbjct: 373 P*PGSCGSSSPWVSSRTPTLT 435
>gb|BF258158.2|BF258158 HVSMEf0014P07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014P07f, mRNA sequence
Length = 575
Score = 226 bits (487), Expect(2) = 2e-092
Identities = 91/101 (90%), Positives = 94/101 (93%)
Frame = +3 / +1
Query: 441 RLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAF 620
RLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRDP LVKRIG ATALEVRATGI YAF
Sbjct: 1 RLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPMLVKRIGEATALEVRATGIPYAF 180
Query: 621 APCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
APCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 181 APCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDVP 303
Score = 135 bits (289), Expect(2) = 2e-092
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +3 / +1
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT INEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 310 SEGRPYVGGSKKVAACAKHYVGDGGTFMXINENDTIIDAHGLMTIHMPAYYNSIIRGVST 489
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRL 1016
VM SYS +G KMHANH L+T FLK++L
Sbjct: 490 VMTSYSXLDGKKMHANHFLVTDFLKNKL 573
Score = 129 bits (276), Expect(3) = 2e-056
Identities = 58/73 (79%), Positives = 62/73 (84%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 221 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 42
Query: 481 WTASMP*IIGMPR 443
TAS+P*IIGMPR
Sbjct: 41 CTASIP*IIGMPR 3
Score = 102 bits (218), Expect(3) = 2e-056
Identities = 47/87 (54%), Positives = 55/87 (63%)
Frame = -2 / -1
Query: 1018 LSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLM 839
LSL RK V R WLACI P E E++TVE PL *AG+W++I P SM+V FSL+
Sbjct: 575 LSLFFRKSVTRKWLACIFFPSSXEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLI 396
Query: 838 PFCVPPSPTKCLAHAATLSFPAAKGMP 758
VPPSPT C AHAAT P G+P
Sbjct: 395 XINVPPSPT*CFAHAATFLLPPTYGLP 315
Score = 27.6 bits (54), Expect(3) = 2e-056
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 302 GTSPCRPEMSVVIDWT 255
>gb|AL504655.1|AL504655 AL504655 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05P08V 5', mRNA sequence
Length = 700
Score = 285 bits (616), Expect(3) = 2e-091
Identities = 118/156 (75%), Positives = 130/156 (83%)
Frame = +3 / +2
Query: 1026 GFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPM 1205
GF ISDW+GIDR+TSPPG NYSYSV+A + AG+DMIMVP Y FI LT V + +IPM
Sbjct: 8 GFXISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAYTEFIDDLTYQVKNNIIPM 187
Query: 1206 SRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGD 1385
SRI+DAV RILRVKFTMGLFE+P DPSL +LGKQEHRDLAREAVRKSLVLLKNGK
Sbjct: 188 SRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEHRDLAREAVRKSLVLLKNGKSAS 367
Query: 1386 APLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQG 1493
PLLPLPKKA +ILVAGSHAD+LG QCGGWTI WQG
Sbjct: 368 TPLLPLPKKAGKILVAGSHADDLGNQCGGWTITWQG 475
Score = 212 bits (458), Expect(3) = 3e-063
Identities = 98/155 (63%), Positives = 106/155 (68%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH +VHPPHW P+ SAWLPATRIL AF GRG++G PF S+T+D TASRARS CSC
Sbjct: 471 CHVMVHPPHWLPKSSAWLPATRILPAFFGRGNNGVEADFPFFSNTNDFLTASRARSRCSC 292
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMI 1130
FPS RLGS G SNRPMVN T RI TAS ILL+G+ T VR M * GTMI
Sbjct: 291 FPSSPTRLGSA*GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMI 112
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKP 1025
MS PA A TE*E*F PGGLV SMP QSEI P
Sbjct: 111 MSIPAPTPASTE*E*FTPGGLVIRSMPCQSEIXNP 7
Score = 79.4 bits (167), Expect(3) = 2e-022
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = -1 / -1
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
EA V G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV
Sbjct: 274 EAWVSIGALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGT 95
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPI 1041
N SL+ + +V WRA +P++ALP+
Sbjct: 94 NSSLN*IRIVHAWRASNPINALPV 23
Score = 46.9 bits (96), Expect(3) = 2e-091
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3 / +1
Query: 1620 YAIVAVGEHPYTETKGDSMNLTIPDPGPSTV 1712
YAIV VGE PY ET GD++NLTIP P V
Sbjct: 607 YAIVVVGEPPYAETFGDNLNLTIPCARPLRV 699
Score = 45.5 bits (93), Expect(3) = 2e-091
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3 / +2
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSG 1610
L A+K+ VDPSTEVVF+E+PD+ V SG
Sbjct: 512 LSAIKSTVDPSTEVVFSENPDSAXVDSG 595
Score = 41.4 bits (84), Expect(3) = 3e-063
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 1702 GPGSGIVRFMLSPLVSVYGCSPTATIA 1622
G GIVRF LSP VS YG SPT T+A
Sbjct: 689 GRAQGIVRFRLSPNVSAYGGSPTTTMA 609
Score = 36.3 bits (73), Expect(3) = 2e-022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 1496 VALPLDRPPAALVPQVVGVAPCDQD 1422
++LP D P +ALV QVVGVA D+D
Sbjct: 478 LSLPCDGPSSALVAQVVGVASSDED 404
Score = 35.4 bits (71), Expect(3) = 2e-022
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -1 / -2
Query: 1700 PGVRDRQVHAVALGLRVRVLAHGHDRV 1620
PG RDRQV VA L VR LA HD V
Sbjct: 687 PGARDRQVQVVAERLSVRWLADHHDGV 607
Score = 28.6 bits (56), Expect(3) = 3e-063
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 1609 PLLTNSASGLSANTTSVDGSTAAFTA 1532
PL T + SG S TTSV GST A
Sbjct: 594 PLSTXALSGFSEKTTSVLGSTVDLIA 517
>gb|CA015249.1|CA015249 HT13L19r HT Hordeum vulgare subsp. vulgare cDNA clone HT13L19
5-PRIME, mRNA sequence
Length = 570
Score = 331 bits (718), Expect = 7e-090
Identities = 132/167 (79%), Positives = 145/167 (86%)
Frame = +3 / +2
Query: 1482 EWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTET 1661
EWQGD L+AVKAAVDPST VVFAE+PDAEFV+SGGFSYAIVAVGEHPYTET
Sbjct: 2 EWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYAIVAVGEHPYTET 181
Query: 1662 KGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQG 1841
KGD++NLTIP+PG STVQ VC VRC TVLISGRPVV+QP L A DA+VAAWLPG+EGQG
Sbjct: 182 KGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDALVAAWLPGSEGQG 361
Query: 1842 VTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTT 1982
VTD LFGD+GFTG+LPRTWF+SVDQLPMN GDAHYDPLF LG+GLTT
Sbjct: 362 VTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTT 502
Score = 269 bits (582), Expect = 4e-071
Identities = 117/154 (75%), Positives = 122/154 (79%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
CASP FIGSWSTDLNHVRGS PVNP SPNS SVTP PS PGS AAT+AS A +GC TTG
Sbjct: 462 CASPTFIGSWSTDLNHVRGSLPVNPKSPNSASVTPCPSEPGSHAATSASEAASSGCTTTG 283
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
RPLMSTV HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTAT+A EKPPLLTNSASG
Sbjct: 282 RPLMSTVAHRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTATMA*EKPPLLTNSASG 103
Query: 1582 LSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHS 1481
SANTT+VDGSTAAFTA PCHS
Sbjct: 102 FSANTTTVDGSTAAFTASRMVVPTVVRPVSPCHS 1
Score = 97.3 bits (206), Expect(2) = 1e-024
Identities = 48/79 (60%), Positives = 53/79 (67%)
Frame = -1 / -3
Query: 1718 RLYGARPGVRDRQVHAVALGLRVRVLAHGHDRVREAAAPDELGVGALREXXXXXXXXXXX 1539
RL+GA+ G+RD QV VALGLRVRVLAHG+D V EAAA DEL VG L E
Sbjct: 238 RLHGAQAGLRDGQVQVVALGLRVRVLAHGNDGVGEAAALDELRVGVLGEHHDRRRVHGRL 59
Query: 1538 XXVQDRGADGGAPRVALPL 1482
+QD GA GGA RVALPL
Sbjct: 58 HRLQDGGAHGGAARVALPL 2
Score = 37.3 bits (75), Expect(2) = 1e-024
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 1856 QHVGDTLALGPRQPGRHDRVHGAQERLY 1773
Q VGD+L L +P RH RV G Q+RL+
Sbjct: 376 QRVGDSLPLRAGEPRRHQRVGGGQQRLH 293
>gb|BQ464740.1|BQ464740 HU01E02T HU Hordeum vulgare subsp. vulgare cDNA clone HU01E02
5-PRIME, mRNA sequence
Length = 563
Score = 325 bits (703), Expect(2) = 1e-089
Identities = 132/162 (81%), Positives = 149/162 (91%)
Frame = +3 / +1
Query: 891 MPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTS 1070
MPAY +A+ KG STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF ISDWEGIDR+T+
Sbjct: 37 MPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT 216
Query: 1071 PPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKF 1250
P G++YSYSV+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRIDDAVTRILRVKF
Sbjct: 217 PAGSDYSYSVKASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKF 396
Query: 1251 TMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
TMGLFENP DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 397 TMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 522
Score = 255 bits (551), Expect(2) = 3e-067
Identities = 120/165 (72%), Positives = 128/165 (77%)
Frame = -2 / -1
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
LPF SSTSD AS A+SLCSCFPS SA GS GFS RPMVNLTRRIRVTASSILL+G+
Sbjct: 521 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMVNLTRRIRVTASSILLMGM 342
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP L
Sbjct: 341 TPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPLNL 162
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWML 881
S+SLR PV R WLACIL+PFQLE*EIMTVE PL A AGM L
Sbjct: 161 SVSLRYPVTRSWLACILTPFQLE*EIMTVETPLSMAFLYAGMGCL 27
Score = 193 bits (415), Expect = 4e-048
Identities = 81/128 (63%), Positives = 91/128 (71%)
Frame = -1 / -3
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVLE+ HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN SL R
Sbjct: 420 GVLEETHGELDPQDPGHGIVDPAHGDDAAVDMAGQDADELLVVVRHHDHVKAGKNGSLDR 241
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALA 915
VGVVR R GDPV+ALP+ D DEV+VGVH +PVPAGVGDHDGG+AL
Sbjct: 240 VGVVRSGRGGDPVNALPV*DHEALEFERVLEVSGDEVLVGVHLDPVPAGVGDHDGGDALV 61
Query: 914 ERVQVGRH 891
V V RH
Sbjct: 60 HGVLVRRH 37
Score = 59.3 bits (123), Expect(3) = 9e-022
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 1070 PSRGELLLLCAGFDSCWP*HDHGAQQLPKLHHHPD 1174
P R LLLL GF SC P*HDHGA+QLP +H HPD
Sbjct: 216 PCRI*LLLLGQGFHSCRP*HDHGAEQLPAVHQHPD 320
Score = 48.3 bits (99), Expect(3) = 9e-022
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 890 HAGLPGRAPQGXXXXXXXXXXXERAQNARQPQPHHRLPQGQA 1015
HAG+ R QG ER Q+ARQP+P HR+PQG A
Sbjct: 36 HAGVQERHGQGRLHRHDLLLQLERGQDARQPRPRHRIPQGHA 161
Score = 35.0 bits (70), Expect(3) = 9e-022
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 1222 P*LGFCASSSPWACSRTPCRT 1284
P* G C SSSPW SRTP T
Sbjct: 368 P*PGSCGSSSPWVSSRTPTLT 430
Score = 27.2 bits (53), Expect(2) = 1e-089
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 1383 DAPLLPLPKK 1412
DAPLLPLPKK
Sbjct: 532 DAPLLPLPKK 561
Score = 22.1 bits (42), Expect(2) = 3e-067
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 1414 AFLGRGSSGAS 1382
AFLG G SGAS
Sbjct: 563 AFLGSGRSGAS 531
>gb|CA007641.1|CA007641 HU08J08r HU Hordeum vulgare subsp. vulgare cDNA clone HU08J08
5-PRIME, mRNA sequence
Length = 599
Score = 266 bits (576), Expect(2) = 3e-088
Identities = 109/146 (74%), Positives = 120/146 (82%)
Frame = +3 / +2
Query: 306 ASPQALRDYYIXXXXXXXXXVPRKQATAAEWVAMVSDFQKACLSTRLGIPMIYGIDAVHG 485
A+ +A+ Y+I VP QA+AA W +MV++ QK LSTRLGIPMIYGIDAVHG
Sbjct: 11 ATAEAMSKYFIGSVLSGGGSVPSPQASAAAWQSMVNEMQKGALSTRLGIPMIYGIDAVHG 190
Query: 486 HNNVYGATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRC 665
HNNVY ATIFPHNVGLGATRDP LVKRIG ATALEVRATGI YAFAPCIAVCRDPRWGRC
Sbjct: 191 HNNVYKATIFPHNVGLGATRDPMLVKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRC 370
Query: 666 YESYSEDHRIVQAMTELIPGLQGDVP 743
YESYSED ++VQ+MT LI GLQGDVP
Sbjct: 371 YESYSEDPKVVQSMTTLISGLQGDVP 448
Score = 145 bits (311), Expect(3) = 3e-049
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -3
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 366 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 187
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 186 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 70
Score = 80.8 bits (170), Expect(2) = 3e-088
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMP 896
+ G P+ G KVAACAKH+VGDGGT INEN+TIID GL++IHMP
Sbjct: 455 SEGRPYVGGSKKVAACAKHYVGDGGTFMXINENDTIIDAHGLMTIHMP 598
Score = 62.5 bits (130), Expect(3) = 3e-049
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -2 / -3
Query: 895 GMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
G+W++I P SM+V FSL+ VPPSPT C AHAAT P G+P
Sbjct: 597 GIWIVISPWASMIVSFSLIXINVPPSPT*CFAHAATFLLPPTYGLP 460
Score = 27.6 bits (54), Expect(3) = 3e-049
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 447 GTSPCRPEMSVVIDWT 400
>gb|AV918661.1|AV918661 AV918661 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m18 3', mRNA sequence
Length = 663
Score = 286 bits (619), Expect(2) = 1e-087
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / -1
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 549 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 370
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 369 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 190
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 189 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 85
Score = 192 bits (413), Expect(2) = 7e-059
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / +2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 134 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 313
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 314 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 493
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 494 FSEKTTSVLGSTVDLIA 544
Score = 58.8 bits (122), Expect(2) = 1e-087
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / -1
Query: 1419 RILVAGSHADNLGYQCGGWTIEWQG 1493
+ILVAGSHAD+LG QCGGWTI WQG
Sbjct: 660 KILVAGSHADDLGNQCGGWTITWQG 586
Score = 57.4 bits (119), Expect(2) = 7e-059
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / +2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRIL 1418
CH +VHPPHW P+ SAWLPATRIL
Sbjct: 590 CHVMVHPPHWLPKSSAWLPATRIL 661
>gb|CA020043.1|CA020043 HV14C18r HV Hordeum vulgare subsp. vulgare cDNA clone HV14C18
5-PRIME, mRNA sequence
Length = 542
Score = 311 bits (674), Expect(2) = 2e-087
Identities = 126/153 (82%), Positives = 142/153 (92%)
Frame = +3 / +2
Query: 918 KGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYS 1097
+G STVMISYSSWNG+KMHAN +L+TG+LKD L F+GF ISDWEGIDR+T+P G++YSYS
Sbjct: 8 RGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYS 187
Query: 1098 VQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPM 1277
V+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRIDDAVTRILRVKFTMGLFENP
Sbjct: 188 VKASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPY 367
Query: 1278 PDPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 368 ADPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 466
Score = 250 bits (541), Expect(2) = 1e-067
Identities = 115/153 (75%), Positives = 123/153 (80%)
Frame = -2 / -3
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
LPF SSTSD AS A+SLCSCFPS SA GS GFS RPMVNLTRRIRVTASSILL+G+
Sbjct: 465 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMVNLTRRIRVTASSILLMGM 286
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T PVRM+M W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP L
Sbjct: 285 TPPLTWPVRMLMNCW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEITKPLNL 106
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPL 917
S+SLR PV R WLACIL+PFQLE*EIMTVE PL
Sbjct: 105 SVSLRYPVTRSWLACILTPFQLE*EIMTVETPL 7
Score = 184 bits (396), Expect = 2e-045
Identities = 76/118 (64%), Positives = 86/118 (72%)
Frame = -1 / -2
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVLE+ HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN SL R
Sbjct: 364 GVLEETHGELDPQDPGHGIVDPAHGDDAAVDMAGQDADELLVVVRHHDHVKAGKNGSLDR 185
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEA 921
VGVVR R GDPV+ALP+ D DEV+VGVH +PVPAGVGDHDGG+A
Sbjct: 184 VGVVRSGRGGDPVNALPV*DHEALEFERVLEVSGDEVLVGVHLDPVPAGVGDHDGGDA 11
Score = 33.1 bits (66), Expect(2) = 2e-087
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 1383 DAPLLPLPKKAARIL 1427
DAPLLPLPKKA +IL
Sbjct: 476 DAPLLPLPKKAPKIL 520
Score = 28.1 bits (55), Expect(2) = 1e-067
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 1426 RILAAFLGRGSSGAS 1382
RIL AFLG G SGAS
Sbjct: 519 RILGAFLGSGRSGAS 475
>gb|CB883402.1|CB883402 HQ02C08w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02C08
3-PRIME, mRNA sequence
Length = 665
Score = 313 bits (678), Expect = 2e-084
Identities = 131/207 (63%), Positives = 157/207 (75%)
Frame = +3 / +1
Query: 1065 TSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRV 1244
+SP GANY+YSVQA I AG+DM+MVP NY FI T VN +I MSRIDDAV+RILRV
Sbjct: 43 SSPAGANYTYSVQAGINAGIDMVMVPFNYTEFIEDATSLVNKSIISMSRIDDAVSRILRV 222
Query: 1245 KFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGKPGDAPLLPLPKKAARI 1424
KFTMGLF+NP+ D S ADQLGK+EHR+LAREAVRKSLVLLKNG + LPLPKKA++I
Sbjct: 223 KFTMGLFDNPLADLSFADQLGKKEHRELAREAVRKSLVLLKNGNTPNQQFLPLPKKASKI 402
Query: 1425 LVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVR 1604
LVAGSHA NLGYQCGGW+I+W G LDA+K+ V +T VV++E+PD F++
Sbjct: 403 LVAGSHASNLGYQCGGWSIQWMGGSGDITAGTTILDAIKSTVGDATPVVYSENPDDSFMK 582
Query: 1605 SGGFSYAIVAVGEHPYTETKGDSMNLT 1685
FS+AIV VGE PY ET GD+ +LT
Sbjct: 583 KNDFSFAIVVVGETPYAETVGDNTDLT 663
Score = 161 bits (346), Expect(2) = 3e-048
Identities = 83/139 (59%), Positives = 93/139 (66%)
Frame = -2 / -1
Query: 1486 HSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSCF 1307
H I HPPHW P+L A LPATRIL AF GRG + LPF + TSD TAS A SLCS F
Sbjct: 464 H*IDHPPHW*PKLLA*LPATRILLAFFGRGRNC*LGVLPFFNRTSDFLTASLANSLCSFF 285
Query: 1306 PSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIM 1127
PS SA+L S G S RP+VN TRR+R+TASSILLI + L T V M *L GT+ +
Sbjct: 284 PS*SAKLRSAKGLSKRPIVNFTRRMRLTASSILLILMILLLTRDVASSMNSV*LKGTITI 105
Query: 1126 SRPARIEACTE*E*FAPGG 1070
S PA I ACTE* *FAP G
Sbjct: 104 SIPAFIPACTE*V*FAPAG 48
Score = 52.4 bits (108), Expect(2) = 3e-048
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = -2 / -1
Query: 1687 IVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
IVR +LSP VS YG SPT TIA EK +SG S TT V T F A
Sbjct: 665 IVRSVLSPTVSAYGVSPTTTIAKEKSFFFMKLSSGFSE*TTGVASPTVDFMA 510
>gb|AV919570.1|AV919570 AV919570 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6k08 3', mRNA sequence
Length = 696
Score = 286 bits (619), Expect(3) = 3e-084
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / -3
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 577 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 398
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 397 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 218
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 217 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 113
Score = 192 bits (413), Expect(3) = 5e-055
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / +3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 162 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 341
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 342 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 521
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 522 FSEKTTSVLGSTVDLIA 572
Score = 38.2 bits (77), Expect(3) = 3e-084
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 1446 DNLGYQCGGWTIEWQG 1493
++LG QCGGWTI WQG
Sbjct: 662 NDLGNQCGGWTITWQG 615
Score = 34.5 bits (69), Expect(3) = 5e-055
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 1489 CHSIVHPPHWYPR 1451
CH +VHPPHW P+
Sbjct: 619 CHVMVHPPHWLPK 657
Score = 28.6 bits (56), Expect(3) = 5e-055
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 1456 PRLSAWLPATRIL 1418
P SAWLPATRIL
Sbjct: 653 PSRSAWLPATRIL 691
Score = 28.6 bits (56), Expect(3) = 3e-084
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 1413 AARILVAGSHADNLG 1457
A +ILVAGSHA+ LG
Sbjct: 696 AGKILVAGSHAERLG 652
>gb|CA021252.1|CA021252 HZ39I23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39I23
5-PRIME, mRNA sequence
Length = 424
Score = 311 bits (673), Expect = 1e-083
Identities = 125/139 (89%), Positives = 130/139 (93%)
Frame = +3 / +3
Query: 393 EWVAMVSDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIG 572
EW MV FQKAC+STRLGIPMIYGIDAVHG NNVYGATIFPHNVGLGATRDP LVKRIG
Sbjct: 6 EWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIG 185
Query: 573 AATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVPQNF 752
ATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSED RIVQ+MTELIPGLQGDVP++F
Sbjct: 186 EATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDF 365
Query: 753 TSGMPFAAGKDKVAACAKH 809
TSGMPF AGK+KVAACAKH
Sbjct: 366 TSGMPFVAGKNKVAACAKH 422
Score = 264 bits (571), Expect = 1e-069
Identities = 110/140 (78%), Positives = 115/140 (82%)
Frame = -2 / -1
Query: 811 KCLAHAATLSFPAAKGMPLVKFCGTSPCRPGMSSVMACTIRWXXXXXX*HRPHLGSRHTA 632
KC AHAATL FPA KGMPLVK GTSPCRPGMSSVM CTIR *HRPHLGS HTA
Sbjct: 424 KCFAHAATLFFPATKGMPLVKSLGTSPCRPGMSSVMDCTIRRSSL*LS*HRPHLGSLHTA 245
Query: 631 MHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWPWTASMP*IIG 452
M GA AYWMPVALTSSAVA+PILFTR+GS VAPRPTLWGK+VAP TL WPWTASMP*I+G
Sbjct: 244 MQGAKAYWMPVALTSSAVASPILFTRYGSRVAPRPTLWGKIVAP*TLFWPWTASMP*IMG 65
Query: 451 MPRRVDRHAFWKSLTMATHS 392
MP RVD AFWK TM+ HS
Sbjct: 64 MPSRVDMQAFWKPSTMSCHS 5
Score = 123 bits (263), Expect(2) = 1e-028
Identities = 57/92 (61%), Positives = 64/92 (69%)
Frame = -1 / -3
Query: 809 VLGARRDLVLSGGEGHAAGEVLRDVALQARDELSHGLHDTXXXXXXXXXXXXPRITAHRN 630
+L A LVLSG EGHAAGEVL DVALQA DEL HGLHD RI+AHR+
Sbjct: 422 MLRACSHLVLSGDEGHAAGEVLGDVALQAGDELRHGLHDPAILAVALIAPPPSRISAHRD 243
Query: 629 AWRERVLDAGGSHFKRGRGADPLHQVWIPGGS 534
A RE VLDAGGS F+RG ADPLH+V +PGG+
Sbjct: 242 ARREGVLDAGGSDFERGGLADPLHEVRVPGGA 147
Score = 24.4 bits (47), Expect(2) = 1e-028
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1 / -3
Query: 452 DAEARGQARLLEVADH 405
DAE RG A LLE H
Sbjct: 65 DAEPRGHAGLLEAVHH 18
>gb|AV833446.1|AV833446 AV833446 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp. vulgare
cDNA clone bags9e08, mRNA sequence
Length = 557
Score = 223 bits (481), Expect(3) = 2e-083
Identities = 86/127 (67%), Positives = 105/127 (82%)
Frame = +3 / +3
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 177 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 356
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 357 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 536
Query: 1113 LAGLDMI 1133
AG+DMI
Sbjct: 537 GAGIDMI 557
Score = 165 bits (354), Expect(3) = 1e-049
Identities = 77/125 (61%), Positives = 85/125 (68%)
Frame = -2 / -2
Query: 1132 IMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQ 953
IMS PA A TE*E*F PGGLV SMP QSEI KP LSL RK V R WLACI PFQ
Sbjct: 556 IMSIPAPTPASTE*E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQ 377
Query: 952 LE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPA 773
LE E++TVE PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT P
Sbjct: 376 LEYEVITVETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPP 197
Query: 772 AKGMP 758
G+P
Sbjct: 196 TYGLP 182
Score = 65.2 bits (136), Expect(3) = 2e-083
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3 / +3
Query: 654 WGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
WGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 81 WGRCYESYSEDPKVVQSMTTLISGLQGDVP 170
Score = 62.0 bits (129), Expect(3) = 2e-083
Identities = 25/28 (89%), Positives = 25/28 (89%)
Frame = +3 / +2
Query: 576 ATALEVRATGIQYAFAPCIAVCRDPRWG 659
ATALEVRATGI YAFAPCIAVCRDP G
Sbjct: 2 ATALEVRATGIPYAFAPCIAVCRDPSMG 85
Score = 44.1 bits (90), Expect(3) = 1e-049
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 658 PHLGSRHTAMHGANAYWMPVALTSSAVA 575
P LGS HTA+HGA A +PVALTS AVA
Sbjct: 84 PILGSLHTAIHGAKA*GIPVALTSRAVA 1
Score = 27.6 bits (54), Expect(3) = 1e-049
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 169 GTSPCRPEMSVVIDWT 122
>gb|BU995244.1|BU995244 HM09K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM09K13
5-PRIME, mRNA sequence
Length = 618
Score = 194 bits (418), Expect(2) = 2e-082
Identities = 72/126 (57%), Positives = 98/126 (77%)
Frame = +3 / +1
Query: 756 SGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTV 935
+G+P AG VA CAKHFVGDGGT+NGINENNT++ L+ IHMP Y DA+ KG ++V
Sbjct: 241 TGIPVVAGPKNVAGCAKHFVGDGGTRNGINENNTVLSFHDLMRIHMPPYYDAVIKGIASV 420
Query: 936 MISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASIL 1115
MISYSSWNG+KMH N LIT LK+++ F+GF I+DW+ +D++T+PP +Y +S+Q +I
Sbjct: 421 MISYSSWNGIKMHENKFLITQILKEKMRFRGFVITDWQAVDKITTPPHKHYYHSIQETIH 600
Query: 1116 AGLDMI 1133
AG+DM+
Sbjct: 601 AGIDMV 618
Score = 133 bits (286), Expect(2) = 2e-082
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +3 / +1
Query: 516 PHNVGLGATRDPNLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRI 695
P NVGLGATRDP+LVK IG ATALE RATGI Y FAPC+AVCRDPRWGRCYES+SED ++
Sbjct: 4 PPNVGLGATRDPDLVKLIGRATALEARATGIPYTFAPCVAVCRDPRWGRCYESFSEDTKL 183
Query: 696 VQAMTELI 719
VQ MT +
Sbjct: 184 VQLMTAAV 207
Score = 125 bits (267), Expect(3) = 1e-047
Identities = 66/125 (52%), Positives = 76/125 (60%)
Frame = -2 / -2
Query: 1129 MSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQL 950
MS PA + + E * GG+V LS QS I P K SLR VMR +CIL PFQL
Sbjct: 614 MSMPAWMVSWMEW**CLCGGVVILSTACQSVITNPLKRIFSLRIWVMRNLFSCILMPFQL 435
Query: 949 E*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAA 770
E*EIMT PL +AS * GMW+ +R + VLFS +P VPPSPTKCLA AT PA
Sbjct: 434 E*EIMTEAMPLMTAS**GGMWIRMRSWKLSTVLFSFIPLRVPPSPTKCLAQPATFLGPAT 255
Query: 769 KGMPL 755
GMP+
Sbjct: 254 TGMPV 240
Score = 83.5 bits (176), Expect(3) = 3e-028
Identities = 41/86 (47%), Positives = 49/86 (56%)
Frame = -1 / -1
Query: 1133 DHVKASKNRSLHRVGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVP 954
DHV A + L V VV R GD V LP+RD DE +V VH + VP
Sbjct: 618 DHVDAGVDGLLDGVVVVLVRRRGDLVHRLPVRDHEPPEAHLLLEDLGDEELVLVHLDAVP 439
Query: 953 AGVGDHDGGEALAERVQVGRHVDAYQ 876
AGVGDHDGG+AL + V VGRHVD ++
Sbjct: 438 AGVGDHDGGDALDDGVVVGRHVDPHE 361
Score = 81.7 bits (172), Expect(3) = 1e-047
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -2 / -2
Query: 715 SSVMACTIRWXXXXXX*HRPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVA 536
++V++CT *H PHLGSR TA HGA MPVAL SSAVA P+ TR GS VA
Sbjct: 203 AAVISCTSFVSSLKLS*HLPHLGSRQTATHGAKV*GMPVALASSAVARPMSLTRSGSRVA 24
Query: 535 PRPTLWG 515
PRPTL G
Sbjct: 23 PRPTLGG 3
Score = 55.1 bits (114), Expect(3) = 3e-028
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = -1 / -1
Query: 707 HGLHDTXXXXXXXXXXXXPRITAHRNAWRERVLDAGGSHFKRGRGADPLHQVWIPGGS 534
H LH PRITA R+AWRE V DAGG +R AD L QV +PGG+
Sbjct: 195 HQLHQLRVLAEALVAPAPPRITADRDAWREGVGDAGGPGLERRGAADELDQVGVPGGA 22
Score = 25.8 bits (50), Expect(3) = 3e-028
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1 / -1
Query: 821 VADEVLGARRDLVLSGGEGHAAG 753
VADEVLGA ++ G +G A G
Sbjct: 306 VADEVLGAAGHVLGPGHDGDARG 238
Score = 23.1 bits (44), Expect(3) = 1e-047
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 745 CGTSPCRPGMSSVM 704
C +PCRPG+++ +
Sbjct: 236 CRGAPCRPGITAAV 195
>gb|BU978383.1|BU978383 HA13B04r HA Hordeum vulgare subsp. vulgare cDNA clone HA13B04
5-PRIME, mRNA sequence
Length = 550
Score = 307 bits (664), Expect = 2e-082
Identities = 128/171 (74%), Positives = 141/171 (82%)
Frame = +3 / +3
Query: 231 RVRDLLARMTLAEKVGQMTQIERIVASPQALRDYYIXXXXXXXXXVPRKQATAAEWVAMV 410
R +DLL RMTLAEK+GQMTQIER A+ +A+ Y+I VP QA+AA W +MV
Sbjct: 6 RGKDLLGRMTLAEKIGQMTQIERENATAEAMSKYFIGSVLSGGGSVPSPQASAAAWQSMV 185
Query: 411 SDFQKACLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGATRDPNLVKRIGAATALE 590
++ QK LSTRLGIPMIYGIDAVHGHNNVY ATIFPHNVGLGATRDP LVKRIG ATALE
Sbjct: 186 NEMQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPMLVKRIGEATALE 365
Query: 591 VRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVP 743
VRATGI YAFAPCIAVCRDPRWGRCYESYSED ++VQ+MT LI GLQGDVP
Sbjct: 366 VRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKVVQSMTTLISGLQGDVP 518
Score = 145 bits (311), Expect(3) = 1e-038
Identities = 69/99 (69%), Positives = 76/99 (76%)
Frame = -2 / -1
Query: 661 RPHLGSRHTAMHGANAYWMPVALTSSAVAAPILFTRFGSLVAPRPTLWGKMVAPYTLLWP 482
RPHLGS HTA+HGA A +PVALTS AVA+PILFT GSLVAPRPTL GKMVA YTLL P
Sbjct: 436 RPHLGSLHTAIHGAKA*GIPVALTSRAVASPILFTNIGSLVAPRPTLCGKMVALYTLL*P 257
Query: 481 WTASMP*IIGMPRRVDRHAFWKSLTMATHSAAVACFRGT 365
TAS+P*IIGMPRRV+R F S T+ +AA A GT
Sbjct: 256 CTASIP*IIGMPRRVERAPFCISFTIDCQAAADA*GEGT 140
Score = 27.6 bits (54), Expect(3) = 1e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 517 GTSPCRPEMSVVIDWT 470
Score = 26.7 bits (52), Expect(3) = 1e-038
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 295 SICVIWPTFSASVI 254
SI VIWP FSA VI
Sbjct: 70 SIWVIWPIFSARVI 29
>gb|AV913362.1|AV913362 AV913362 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m18 5', mRNA sequence
Length = 585
Score = 182 bits (393), Expect(3) = 3e-082
Identities = 72/106 (67%), Positives = 88/106 (83%)
Frame = +3 / +1
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 127 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 306
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGV 1844
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV
Sbjct: 307 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGV 444
Score = 127 bits (271), Expect(3) = 3e-054
Identities = 61/104 (58%), Positives = 65/104 (62%)
Frame = -2 / -2
Query: 1843 TPWPSVPGSQAATTASMAPRNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSP 1664
TPWPS PGS AAT ASMA G T+G P MST TH T HT GPG+GIVRF LSP
Sbjct: 443 TPWPSEPGSHAATNASMALMYGSTTSGLPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSP 264
Query: 1663 LVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTAAFTA 1532
VS YG SPT T+A PL T + SG S TTSV GST A
Sbjct: 263 NVSAYGGSPTTTMA*SYLPLSTAALSGFSEKTTSVLGSTVDLIA 132
Score = 104 bits (222), Expect(3) = 3e-082
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +3 / +2
Query: 1821 PGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTT 1982
P + DVLFGDYGF+GKL RTWF+S DQLPMN GD HYDPLFP GFGLTT
Sbjct: 422 PARRARAWPDVLFGDYGFSGKLARTWFKSADQLPMNVGDKHYDPLFPFGFGLTT 583
Score = 68.0 bits (142), Expect(3) = 3e-054
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = -2 / -1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTS 1847
C SP FIGSWS DLNHVR SFP NP*SPNSTS
Sbjct: 543 CLSPTFIGSWSADLNHVRASFPENP*SPNSTS 448
Score = 58.8 bits (122), Expect(3) = 3e-082
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +1
Query: 1419 RILVAGSHADNLGYQCGGWTIEWQG 1493
+ILVAGSHAD+LG QCGGWTI WQG
Sbjct: 16 KILVAGSHADDLGNQCGGWTITWQG 90
Score = 57.4 bits (119), Expect(3) = 3e-054
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 1489 CHSIVHPPHWYPRLSAWLPATRIL 1418
CH +VHPPHW P+ SAWLPATRIL
Sbjct: 86 CHVMVHPPHWLPKSSAWLPATRIL 15
>gb|AV920100.1|AV920100 AV920100 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9e08 3', mRNA sequence
Length = 682
Score = 286 bits (619), Expect(2) = 4e-082
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / -1
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 577 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 398
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 397 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 218
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 217 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 113
Score = 192 bits (413), Expect(2) = 2e-052
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / +3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 162 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 341
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 342 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 521
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 522 FSEKTTSVLGSTVDLIA 572
Score = 40.5 bits (82), Expect(2) = 4e-082
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -1
Query: 1446 DNLGYQCGGWTIEWQG 1493
D+LG QCGGWTI WQG
Sbjct: 661 DDLGNQCGGWTITWQG 614
Score = 35.9 bits (72), Expect(2) = 2e-052
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / +3
Query: 1489 CHSIVHPPHWYPRLSA 1442
CH +VHPPHW P+ S+
Sbjct: 618 CHVMVHPPHWLPKSSS 665
>gb|BQ465777.1|BQ465777 HU04K15r HU Hordeum vulgare subsp. vulgare cDNA clone HU04K15
5-PRIME, mRNA sequence
Length = 602
Score = 292 bits (631), Expect(2) = 6e-082
Identities = 118/174 (67%), Positives = 141/174 (81%)
Frame = +3 / +3
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 75 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 254
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 255 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 434
Query: 1113 LAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENP 1274
AG+DMIMVP Y FI LT V + +IPMSRI+DAV RILRVKFTMGLFE+P
Sbjct: 435 GAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESP 596
Score = 208 bits (448), Expect(2) = 8e-055
Identities = 103/172 (59%), Positives = 113/172 (65%)
Frame = -2 / -2
Query: 1273 GFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE 1094
G SNRPMVN T RI TAS ILL+G+ T VR M * GTMIMS PA A TE
Sbjct: 595 GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMIMSIPAPTPASTE 416
Query: 1093 *E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLR 914
*E*F PGGLV SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL
Sbjct: 415 *E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLM 236
Query: 913 SASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
*AG+W++I P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 235 IEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 80
Score = 76.2 bits (160), Expect(3) = 1e-022
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = -1 / -1
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV N SL+
Sbjct: 596 GALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGTNSSLN* 417
Query: 1094 VGVVRPWRAGDPVDALPI 1041
+ +V WRA +P++ALP+
Sbjct: 416 IRIVHAWRASNPINALPV 363
Score = 46.9 bits (96), Expect(3) = 1e-022
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 314 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 198
Score = 34.5 bits (69), Expect(2) = 6e-082
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 690 RIVQAMTELIPGLQGDVP 743
++VQ+MT LI GLQGDVP
Sbjct: 15 KVVQSMTTLISGLQGDVP 68
Score = 27.6 bits (54), Expect(2) = 8e-055
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVMACT 695
GTSPCRP MS V+ T
Sbjct: 67 GTSPCRPEMSVVIDWT 20
Score = 22.1 bits (42), Expect(3) = 1e-022
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 1029 SPGS*ACP*GSL**GCGWRAF 967
+P *AC + * G GWRAF
Sbjct: 351 NPEI*ACSSENQ*QGNGWRAF 289
>gb|BQ458498.1|BQ458498 HA05A21r HA Hordeum vulgare subsp. vulgare cDNA clone HA05A21
5-PRIME, mRNA sequence
Length = 598
Score = 300 bits (650), Expect(2) = 8e-082
Identities = 122/180 (67%), Positives = 145/180 (80%)
Frame = +3 / +2
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G ST
Sbjct: 53 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVST 232
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 233 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGV 412
Query: 1113 LAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSL 1292
AG+DMIMVP Y FI LT V + +IPMSRI+DAV RILRVKFTMGLFE+P DPSL
Sbjct: 413 GAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSL 592
Score = 215 bits (463), Expect(2) = 7e-057
Identities = 107/178 (60%), Positives = 117/178 (65%)
Frame = -2 / -2
Query: 1291 RLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPAR 1112
RLGS G SNRPMVN T RI TAS ILL+G+ T VR M * GTMIMS PA
Sbjct: 591 RLGSA*GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMIMSIPAP 412
Query: 1111 IEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMT 932
A TE*E*F PGGLV SMP QSEI KP LSL RK V R WLACI PFQLE E++T
Sbjct: 411 TPASTE*E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVIT 232
Query: 931 VEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAKGMP 758
VE PL *AG+W++I P SM+V FSL+P VPPSPT C AHAAT P G+P
Sbjct: 231 VETPLMIEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAATFLLPPTYGLP 58
Score = 79.4 bits (167), Expect(3) = 2e-023
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = -1 / -1
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
EA V G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV
Sbjct: 592 EAWVSIGALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGT 413
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPI 1041
N SL+ + +V WRA +P++ALP+
Sbjct: 412 NSSLN*IRIVHAWRASNPINALPV 341
Score = 46.9 bits (96), Expect(3) = 2e-023
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 292 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 176
Score = 27.6 bits (54), Expect(2) = 7e-057
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVM 704
GTSPCRP MS V+
Sbjct: 45 GTSPCRPEMSVVL 7
Score = 25.4 bits (49), Expect(2) = 8e-082
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 708 TELIPGLQGDVP 743
T LI GLQGDVP
Sbjct: 11 TTLISGLQGDVP 46
Score = 22.1 bits (42), Expect(3) = 2e-023
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 1029 SPGS*ACP*GSL**GCGWRAF 967
+P *AC + * G GWRAF
Sbjct: 329 NPEI*ACSSENQ*QGNGWRAF 267
>gb|CA019039.1|CA019039 HV10I20r HV Hordeum vulgare subsp. vulgare cDNA clone HV10I20
5-PRIME, mRNA sequence
Length = 485
Score = 303 bits (655), Expect = 3e-081
Identities = 120/161 (74%), Positives = 144/161 (89%)
Frame = +3 / +3
Query: 801 AKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHAN 980
A+ FVGDGGT NGINE+NT+I+R+GL++IHMPAY DAL KG STVMISYSSWNG+KMHAN
Sbjct: 3 ARGFVGDGGTVNGINEDNTVINREGLMNIHMPAYFDALAKGVSTVMISYSSWNGVKMHAN 182
Query: 981 HNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNF 1160
+L+TG+LKD L FQGF ISDW+GID++TSP G++Y YSV+AS+LAGLDMIMVP+NY F
Sbjct: 183 KDLVTGYLKDTLKFQGFVISDWKGIDKITSPGGSDYHYSVKASVLAGLDMIMVPSNYTQF 362
Query: 1161 ITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPD 1283
I+ILT +VNSG++PMSRIDDAVTRILRVKF MGLFE+P D
Sbjct: 363 ISILTSYVNSGVVPMSRIDDAVTRILRVKFAMGLFESPYAD 485
Score = 245 bits (530), Expect = 6e-064
Identities = 117/155 (75%), Positives = 122/155 (78%)
Frame = -2 / -2
Query: 1273 GFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE 1094
G SNRPM NLTRRIRVTASSILLIG PL T* V M+M *LLGTMIMSRPAR EA TE
Sbjct: 475 GLSNRPMANLTRRIRVTASSILLIGTTPLLT*LVSMLMNCV*LLGTMIMSRPARTEALTE 296
Query: 1093 *E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLR 914
* * P GLV LS+P QSEI KPW LS+SLR PV R LACIL+PFQLE*EIMTVE PL
Sbjct: 295 *W*SDPPGLVILSIPFQSEITKPWNLSVSLRYPVTRSLLACILTPFQLE*EIMTVETPLA 116
Query: 913 SASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTK 809
AS+*AGMWM IRP R M VL SLMPF VPPSPTK
Sbjct: 115 RASK*AGMWMFIRPSRLMTVLSSLMPFTVPPSPTK 11
Score = 198 bits (427), Expect = 1e-049
Identities = 89/153 (58%), Positives = 99/153 (64%)
Frame = -1 / -1
Query: 1268 LEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHRVG 1089
LEQAHGELDAQ+P GVVDPAHRD +AV V Q DE+ VV HHDHVKA KNRSL RV
Sbjct: 470 LEQAHGELDAQDPGDGVVDPAHRDYSAVDVASQYADELRVVTRHHDHVKAGKNRSLDRVV 291
Query: 1088 VVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALAER 909
VVRP RA D V+ LPI D D++ VGVHF+PVPAGVGDHDGG+AL E
Sbjct: 290 VVRPSRARDLVNTLPI*DHEALEFERVFEVSSDQIFVGVHFDPVPAGVGDHDGGDALGES 111
Query: 908 VQVGRHVDAYQXXXXXXXXXXXXXXXXATVADE 810
V+VGRHVD +Q A VADE
Sbjct: 110 VEVGRHVDVHQALAVDDGVVLVDAVHRAAVADE 12
>gb|BU996833.1|BU996833 HM14O21r HM Hordeum vulgare subsp. vulgare cDNA clone HM14O21
5-PRIME, mRNA sequence
Length = 532
Score = 191 bits (412), Expect(3) = 5e-079
Identities = 77/108 (71%), Positives = 86/108 (79%)
Frame = +3 / +1
Query: 1434 GSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGG 1613
G+ ++CGGWTIEWQGD L+AVKAAVDPST VVFAE+PDAEFV+SGG
Sbjct: 208 GATPTTWAWECGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGG 387
Query: 1614 FSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLIS 1757
FSYAIVAVGEHPYTETKGD++NLTIP+PG STVQ VC VRC TVLIS
Sbjct: 388 FSYAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLIS 531
Score = 168 bits (361), Expect(2) = 3e-055
Identities = 75/119 (63%), Positives = 84/119 (70%)
Frame = -2 / -3
Query: 1756 LMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLS 1577
LMSTV HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTAT+A EKPPLLTNSASG S
Sbjct: 530 LMSTVAHRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTATMA*EKPPLLTNSASGFS 351
Query: 1576 ANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLPATRILAAFLGR 1400
ANTT+VDGSTAAFTA PCHS+V PPH + ++ P + LG+
Sbjct: 350 ANTTTVDGSTAAFTASRMVVPTVVRPVSPCHSMVQPPHSHAQVVGVAPGDQDHGRLLGQ 174
Score = 107 bits (228), Expect(3) = 2e-033
Identities = 53/86 (61%), Positives = 58/86 (67%)
Frame = -1 / -2
Query: 1718 RLYGARPGVRDRQVHAVALGLRVRVLAHGHDRVREAAAPDELGVGALREXXXXXXXXXXX 1539
RL+GA+ G+RD QV VALGLRVRVLAHG+D V EAAA DEL VG L E
Sbjct: 492 RLHGAQAGLRDGQVQVVALGLRVRVLAHGNDGVGEAAALDELRVGVLGEHHDRRRVHGRL 313
Query: 1538 XXVQDRGADGGAPRVALPLDRPPAAL 1461
+QD GA GGA RVALPLD P AAL
Sbjct: 312 HRLQDGGAHGGAARVALPLDGPAAAL 235
Score = 88.6 bits (187), Expect(3) = 5e-079
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +3 / +3
Query: 1251 TMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
TMGLFENP DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 21 TMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 146
Score = 68.9 bits (144), Expect(2) = 3e-055
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = -2 / -1
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMV 1250
LPF SSTSD AS A+SLCSCFPS SA GS GFS RPMV
Sbjct: 145 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGSA*GFSKRPMV 20
Score = 55.6 bits (115), Expect(3) = 5e-079
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +3 / +3
Query: 1383 DAPLLPLPKKAARILVAGSHADNLG 1457
DAPLLPLPKKA ILVAGSHADNLG
Sbjct: 156 DAPLLPLPKKAPMILVAGSHADNLG 230
Score = 52.4 bits (108), Expect(3) = 2e-033
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -2 / -1
Query: 1456 PRLSAWLPATRILAAFLGRGSSGAS 1382
PRLSAWLPATRI+ AFLG G SGAS
Sbjct: 229 PRLSAWLPATRIMGAFLGSGRSGAS 155
Score = 22.1 bits (42), Expect(3) = 2e-033
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 1274 GVLEQAHGELDA 1239
GVLE+ HG L A
Sbjct: 44 GVLEETHGNLPA 9
>gb|AV925468.1|AV925468 AV925468 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd24f16 5', mRNA sequence
Length = 621
Score = 207 bits (447), Expect(2) = 8e-079
Identities = 88/114 (77%), Positives = 95/114 (83%)
Frame = +3 / +2
Query: 1152 QNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLA 1331
Q FI LT V + +IPMSRI+DAV RILRVKFTMGLFE+P DPSL +LGKQEHRDLA
Sbjct: 44 QXFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEHRDLA 223
Query: 1332 REAVRKSLVLLKNGKPGDAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQG 1493
REAVRKSLVLLKNGK PLLPLPKKA +ILVAGSHAD+LG QCGGWTI WQG
Sbjct: 224 REAVRKSLVLLKNGKSASTPLLPLPKKAGKILVAGSHADDLGNQCGGWTITWQG 385
Score = 160 bits (343), Expect(2) = 8e-054
Identities = 69/110 (62%), Positives = 77/110 (70%)
Frame = -2 / -1
Query: 1489 CHSIVHPPHWYPRLSAWLPATRILAAFLGRGSSGASPGLPFLSSTSDLRTASRARSLCSC 1310
CH +VHPPHW P+ SAWLPATRIL AF GRG++G PF S+T+D TASRARS CSC
Sbjct: 381 CHVMVHPPHWLPKSSAWLPATRILPAFFGRGNNGVEADFPFFSNTNDFLTASRARSRCSC 202
Query: 1309 FPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVM 1160
FPS RLGS G SNRPMVN T RI TAS ILL+G+ T VR M
Sbjct: 201 FPSSPTRLGSA*GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSM 52
Score = 108 bits (230), Expect(2) = 8e-079
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +3 / +2
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 422 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 601
Query: 1707 TVQTVC 1724
+Q VC
Sbjct: 602 VIQNVC 619
Score = 72.5 bits (152), Expect(2) = 8e-054
Identities = 36/64 (56%), Positives = 39/64 (60%)
Frame = -2 / -1
Query: 1723 HTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSVDGSTA 1544
HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG S TTSV GST
Sbjct: 618 HTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSGFSEKTTSVLGSTV 439
Query: 1543 AFTA 1532
A
Sbjct: 438 DLIA 427
>gb|BF255596.2|BF255596 HVSMEf0007E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007E15f, mRNA sequence
Length = 857
Score = 236 bits (509), Expect(3) = 6e-078
Identities = 94/141 (66%), Positives = 111/141 (78%)
Frame = +3 / +3
Query: 753 TSGMPFAAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFST 932
+ G P+ G KVAACAKH+VGDGGT GINEN TIID GL++IHMPAY +++ +G ST
Sbjct: 81 SEGRPYVGGSKKVAACAKHYVGDGGTFMGINENGTIIDAHGLMTIHMPAYYNSIIRGVST 260
Query: 933 VMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASI 1112
VM SYSSWNG KMHANH L+T FLK++L F GF ISDW+GIDR+TSPPG NYSYSV+A +
Sbjct: 261 VMTSYSSWNGKKMHANHFLVTDFLKNKLKFWGFVISDWQGIDRITSPPGVNYSYSVEAGV 440
Query: 1113 LAGLDMIMVPNNYQNFITILT 1175
AG+DMIMVP Y FI LT
Sbjct: 441 GAGIDMIMVPFAYTEFIDDLT 503
Score = 174 bits (374), Expect(3) = 2e-048
Identities = 84/139 (60%), Positives = 92/139 (66%)
Frame = -2 / -2
Query: 1174 VRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKP 995
VR M * GTMIMS PA A TE*E*F PGGLV SMP QSEI KP LSL RK
Sbjct: 502 VRSSMNSV*AKGTMIMSIPAPTPASTE*E*FTPGGLVIRSMPCQSEITKPQNLSLFFRKS 323
Query: 994 VMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSP 815
V R WLACI PFQLE E++TVE PL *AG+W++I P SM+V FSL+P VPPSP
Sbjct: 322 VTRKWLACIFLPFQLEYEVITVETPLMIEL**AGIWIVISPWASMIVPFSLIPINVPPSP 143
Query: 814 TKCLAHAATLSFPAAKGMP 758
T C AHAAT P G+P
Sbjct: 142 T*CFAHAATFLLPPTYGLP 86
Score = 53.3 bits (110), Expect(3) = 6e-078
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3 / +1
Query: 1182 VNSGLIPMSRIDDAVTRILRVKFTMGLFENPM 1277
V + +IPMSRI+DAV R +VKFT+GLFE PM
Sbjct: 511 VKNNIIPMSRINDAVYRFFQVKFTLGLFETPM 606
Score = 42.8 bits (87), Expect(3) = 6e-078
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3 / +3
Query: 672 SYSEDHRIVQAMTELIPGLQGDVP 743
SY ED ++VQ+MT LI GLQGDVP
Sbjct: 3 SYIEDPKVVQSMTTLISGLQGDVP 74
Score = 31.8 bits (63), Expect(3) = 2e-048
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 1276 MGFSNRPMVNLTRRIRVTASSILLIGIRPLFT 1181
+G SNRP VN T + TAS ILL+G+ T
Sbjct: 605 IGVSNRPRVNFT*KNL*TASLILLMGMMLFLT 510
Score = 27.2 bits (53), Expect(3) = 2e-048
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 742 GTSPCRPGMSSVM 704
GTSPCRP MS V+
Sbjct: 73 GTSPCRPEMSVVI 35
>gb|BQ468423.1|BQ468423 HM01D10T HM Hordeum vulgare subsp. vulgare cDNA clone HM01D10
5-PRIME, mRNA sequence
Length = 634
Score = 275 bits (595), Expect(2) = 2e-077
Identities = 111/186 (59%), Positives = 145/186 (77%)
Frame = +3 / +1
Query: 819 DGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKMHANHNLITG 998
DGGT++GI+ NNT++ L+ IHMP Y DA+ KG +++MISYSSWNG+KMH N LIT
Sbjct: 1 DGGTRHGISANNTVLSFHDLMRIHMPPYYDAVIKGVASIMISYSSWNGVKMHENKYLITQ 180
Query: 999 FLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNYQNFITILTG 1178
LK+R++F+GF I+DW+ +D++T+ P +Y +S+Q +I AG+DM+MVP +Y F+ LT
Sbjct: 181 ILKERMHFRGFVITDWQAVDKLTTAPHKHYYHSIQETIHAGIDMVMVPFDYPEFVADLTA 360
Query: 1179 HVNSGLIPMSRIDDAVTRILRVKFTMGLFENPMPDPSLADQLGKQEHRDLAREAVRKSLV 1358
V G I M RI+DAVTRILRVKF+MGLFENP PD +L QLG + HR+LAREAVRKSLV
Sbjct: 361 QVMRGSIKMDRINDAVTRILRVKFSMGLFENPFPDKTLTGQLGAKAHRELAREAVRKSLV 540
Query: 1359 LLKNGK 1376
LLKNGK
Sbjct: 541 LLKNGK 558
Score = 177 bits (382), Expect(2) = 6e-048
Identities = 97/185 (52%), Positives = 113/185 (61%)
Frame = -2 / -3
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGI 1196
LPFLSSTSD TAS A S C+ PSW R+ SG GFS RPM NLT R+RVTAS I I +
Sbjct: 557 LPFLSSTSDFLTASLASSRCALAPSWPVRVLSGKGFSKRPMENLTLRMRVTASLIRSILM 378
Query: 1195 RPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKL 1016
P T VR * GTM MS PA I + E * G +V+LS QS I P K
Sbjct: 377 EPRMTWAVRSATNSG*SNGTMTMSMPAWIVSWMEW**CLCGAVVSLSTACQSVITNPLKC 198
Query: 1015 SLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCRSMMVLFSLMP 836
LSLR VMR +CIL+PFQLE*EIM PL +AS * GMW+ +R + VL +L+P
Sbjct: 197 ILSLRIWVMRYLFSCILTPFQLE*EIMMEATPLMTAS**GGMWIRMRSWKLSTVLLALIP 18
Query: 835 FCVPP 821
+ VPP
Sbjct: 17 WRVPP 3
Score = 90.4 bits (191), Expect(2) = 4e-031
Identities = 44/86 (51%), Positives = 53/86 (61%)
Frame = -1 / -2
Query: 1292 EAGVRHGVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASK 1113
E V GVLE+AHGELD ++ GVVDP H D AA + R+ GDE+ VV HDHV A
Sbjct: 474 EGLVGEGVLEEAHGELDPEDAGDGVVDPVHLDGAAHDLGREVGDELWVVEWDHDHVDAGV 295
Query: 1112 NRSLHRVGVVRPWRAGDPVDALPIRD 1035
+R L V VV R G+ V LP+RD
Sbjct: 294 DRLLDGVVVVLVRRGGELVHRLPVRD 217
Score = 66.1 bits (138), Expect(2) = 4e-031
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / -2
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
DEV+V VH + VPAGVGDHDGG+AL + V VGRHVD ++
Sbjct: 174 DEVLVLVHLDAVPAGVGDHDGGDALDDGVVVGRHVDPHE 58
Score = 35.9 bits (72), Expect(2) = 2e-077
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 1371 GKPGDAPLLPLPKKAARILVAGSHA 1445
G+ P+LPL KKA +ILV G+HA
Sbjct: 559 GRKDGKPVLPLSKKAKKILVVGTHA 633
Score = 35.0 bits (70), Expect(2) = 6e-048
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2 / -3
Query: 1444 AWLPATRILAAFLGRGSSGASPGLP 1370
AW+P TRI AFL RG +G LP
Sbjct: 632 AWVPTTRIFLAFLERGRTGLPSFLP 558
>gb|AV909243.1|AV909243 AV909243 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak12b24 5', mRNA sequence
Length = 655
Score = 288 bits (623), Expect = 9e-077
Identities = 112/155 (72%), Positives = 131/155 (84%)
Frame = +3 / +1
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 55 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 234
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+QTVC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 235 VIQTVCKSVRCVVVLISGRPLVLEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 414
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 415 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 519
Score = 193 bits (417), Expect = 2e-048
Identities = 89/137 (64%), Positives = 93/137 (67%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 470 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSSTSG 291
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HTV GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 290 LPEMSTTTHLTLLHTVWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 111
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 110 FSEKTTSVLGSTVDLIA 60
>gb|AV911128.1|AV911128 AV911128 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak12b24 3', mRNA sequence
Length = 609
Score = 288 bits (623), Expect = 9e-077
Identities = 112/155 (72%), Positives = 131/155 (84%)
Frame = +3 / -3
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 580 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 401
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+QTVC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 400 VIQTVCKSVRCVVVLISGRPLVLEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 221
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 220 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 116
Score = 193 bits (417), Expect = 2e-048
Identities = 89/137 (64%), Positives = 93/137 (67%)
Frame = -2 / +3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 165 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSSTSG 344
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HTV GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 345 LPEMSTTTHLTLLHTVWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 524
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 525 FSEKTTSVLGSTVDLIA 575
>gb|BF627275.3|BF627275 HVSMEb0004G19f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004G19f, mRNA sequence
Length = 636
Score = 286 bits (619), Expect = 3e-076
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / +3
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 24 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 203
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 204 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 383
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 384 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 488
Score = 192 bits (413), Expect = 8e-048
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / -3
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 439 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 260
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 259 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 80
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 79 FSEKTTSVLGSTVDLIA 29
>gb|AV930613.1|AV930613 AV930613 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd24f16 3', mRNA sequence
Length = 599
Score = 286 bits (619), Expect = 3e-076
Identities = 111/155 (71%), Positives = 130/155 (83%)
Frame = +3 / -1
Query: 1527 LDAVKAAVDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPS 1706
L A+K+ VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS
Sbjct: 542 LSAIKSTVDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPS 363
Query: 1707 TVQTVCAAVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKL 1886
+Q VC +VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL
Sbjct: 362 VIQNVCKSVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKL 183
Query: 1887 PRTWFRSVDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
RTWF+S DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 182 ARTWFKSADQLPMNVGDKHYDPLFPFGFGLTTEAK 78
Score = 192 bits (413), Expect = 8e-048
Identities = 88/137 (64%), Positives = 92/137 (67%)
Frame = -2 / +1
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 127 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 306
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 307 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 486
Query: 1582 LSANTTSVDGSTAAFTA 1532
S TTSV GST A
Sbjct: 487 FSEKTTSVLGSTVDLIA 537
>gb|BU997464.1|BU997464 HI08B05r HI Hordeum vulgare subsp. vulgare cDNA clone HI08B05
5-PRIME, mRNA sequence
Length = 594
Score = 278 bits (602), Expect = 7e-074
Identities = 108/148 (72%), Positives = 125/148 (84%)
Frame = +3 / -1
Query: 1548 VDPSTEVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCA 1727
VDPSTEVVF+E+PD+ V SG + YAIV VGE PY ET GD++NLTIP PGPS +Q VC
Sbjct: 594 VDPSTEVVFSENPDSAAVDSGKYDYAIVVVGEPPYAETFGDNLNLTIPAPGPSVIQNVCK 415
Query: 1728 AVRCVTVLISGRPVVIQPFLGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRS 1907
+VRCV VLISGRP+V++P++ AMDA VAAWLPG+EGQGV DVLFGDYGF+GKL RTWF+S
Sbjct: 414 SVRCVVVLISGRPLVVEPYISAMDAFVAAWLPGSEGQGVADVLFGDYGFSGKLARTWFKS 235
Query: 1908 VDQLPMNYGDAHYDPLFPLGFGLTTQGK 1991
DQLPMN GD HYDPLFP GFGLTT+ K
Sbjct: 234 ADQLPMNVGDKHYDPLFPFGFGLTTEAK 151
Score = 189 bits (407), Expect = 6e-047
Identities = 86/131 (65%), Positives = 90/131 (68%)
Frame = -2 / +2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
C SP FIGSWS DLNHVR SFP NP*SPNSTS TPWPS PGS AAT ASMA G T+G
Sbjct: 200 CLSPTFIGSWSADLNHVRASFPENP*SPNSTSATPWPSEPGSHAATNASMALMYGSTTSG 379
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASG 1583
P MST TH T HT GPG+GIVRF LSP VS YG SPT T+A PL T + SG
Sbjct: 380 LPEMSTTTHLTLLHTFWITEGPGAGIVRFRLSPNVSAYGGSPTTTMA*SYLPLSTAALSG 559
Query: 1582 LSANTTSVDGS 1550
S TTSV GS
Sbjct: 560 FSEKTTSVLGS 592
>gb|BU977300.1|BU977300 HA11D01r HA Hordeum vulgare subsp. vulgare cDNA clone HA11D01
5-PRIME, mRNA sequence
Length = 499
Score = 278 bits (601), Expect = 1e-073
Identities = 113/161 (70%), Positives = 134/161 (83%)
Frame = +3 / +2
Query: 792 AACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYSSWNGLKM 971
AACAKH+VGDGGT GINEN+TIID GL++IHMPAY +++ +G STVM SYSSWNG KM
Sbjct: 11 AACAKHYVGDGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKM 190
Query: 972 HANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDMIMVPNNY 1151
HANH L+T FLK++L F+GF ISDW+GIDR+TSPPG NYSYSV+A + AG+DMIMVP Y
Sbjct: 191 HANHFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMIMVPFAY 370
Query: 1152 QNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMGLFENP 1274
FI LT V + +IPMSRI+DAV RILRVKFTMGLFE+P
Sbjct: 371 TEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESP 493
Score = 198 bits (426), Expect = 1e-049
Identities = 99/161 (61%), Positives = 108/161 (67%)
Frame = -2 / -2
Query: 1273 GFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE 1094
G SNRPMVN T RI TAS ILL+G+ T VR M * GTMIMS PA A TE
Sbjct: 492 GLSNRPMVNFTLRIL*TASLILLMGMMLFLTWYVRSSMNSV*AKGTMIMSIPAPTPASTE 313
Query: 1093 *E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLR 914
*E*F PGGLV SMP QSEI KP LSL RK V R WLACI PFQLE E++TVE PL
Sbjct: 312 *E*FTPGGLVIRSMPCQSEITKPRNLSLFFRKSVTRKWLACIFLPFQLEYEVITVETPLM 133
Query: 913 SASR*AGMWMLIRPCRSMMVLFSLMPFCVPPSPTKCLAHAA 791
*AG+W++I P SM+V FSL+P VPPSPT C AHAA
Sbjct: 132 IEL**AGIWIVISPWASMIVSFSLIPINVPPSPT*CFAHAA 10
Score = 76.2 bits (160), Expect(3) = 1e-022
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = -1 / -1
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
G L+ HGEL +NP +VD AH D +++ Q +E V +HDHV N SL+
Sbjct: 493 GALK*THGELHPENPVDSIVDSAHGDDVVLNLVCQIINEFCVGKRNHDHVNTGTNSSLN* 314
Query: 1094 VGVVRPWRAGDPVDALPI 1041
+ +V WRA +P++ALP+
Sbjct: 313 IRIVHAWRASNPINALPV 260
Score = 46.9 bits (96), Expect(3) = 1e-022
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 992 DEVVVGVHFEPVPAGVGDHDGGEALAERVQVGRHVDAYQ 876
D+ +VGVHF VPA V H+ G+ +R+ + RH+D++Q
Sbjct: 211 DKEMVGVHFLAVPARVRGHNSGDTSDDRIVISRHMDSHQ 95
Score = 22.1 bits (42), Expect(3) = 1e-022
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -3
Query: 1029 SPGS*ACP*GSL**GCGWRAF 967
+P *AC + * G GWRAF
Sbjct: 248 NPEI*ACSSENQ*QGNGWRAF 186
>gb|BQ469930.1|BQ469930 HX01E12T HX Hordeum vulgare subsp. vulgare cDNA clone HX01E12
5-PRIME, mRNA sequence
Length = 462
Score = 273 bits (590), Expect = 3e-072
Identities = 112/143 (78%), Positives = 121/143 (84%)
Frame = +3 / +1
Query: 1383 DAPLLPLPKKAARILVAGSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPST 1562
DAPLLPLPKKA +ILVAGSHADNLGYQCGGWTIEWQGD L+AVKAAVDPST
Sbjct: 34 DAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPST 213
Query: 1563 EVVFAESPDAEFVRSGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCV 1742
VVFAE+PDAEFV+SGGFSYAIVAVGEHPYTETKGD++NLTIP+PG STVQ VC VRC
Sbjct: 214 VVVFAENPDAEFVKSGGFSYAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCA 393
Query: 1743 TVLISGRPVVIQPFLGAMDAVVA 1811
TVLISGR V+QP L A DA+VA
Sbjct: 394 TVLISGRSEVVQPLLAASDALVA 462
Score = 244 bits (528), Expect = 1e-063
Identities = 106/143 (74%), Positives = 112/143 (78%)
Frame = -2 / -2
Query: 1810 ATTASMAPRNGCITTGRPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTA 1631
AT+AS A NGC T+ RPLMSTV HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTA
Sbjct: 461 ATSASEAASNGCTTSDRPLMSTVAHRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTA 282
Query: 1630 TIAYEKPPLLTNSASGLSANTTSVDGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPR 1451
T+A EKPPLLTNSASG SANTT+VDGSTAAFTA PCHS+V PPHW PR
Sbjct: 281 TMA*EKPPLLTNSASGFSANTTTVDGSTAAFTASRMVVPTVVRPVSPCHSMVQPPHW*PR 102
Query: 1450 LSAWLPATRILAAFLGRGSSGAS 1382
LSAWLPATRIL AFLG G SGAS
Sbjct: 101 LSAWLPATRILGAFLGSGRSGAS 33
Score = 130 bits (279), Expect = 3e-029
Identities = 64/99 (64%), Positives = 69/99 (69%)
Frame = -1 / -1
Query: 1718 RLYGARPGVRDRQVHAVALGLRVRVLAHGHDRVREAAAPDELGVGALREXXXXXXXXXXX 1539
RL+GA+ G+RD QV VALGLRVRVLAHG+D V EAAA DEL VG L E
Sbjct: 369 RLHGAQAGLRDGQVQVVALGLRVRVLAHGNDGVGEAAALDELRVGVLGEHHDRRRVHGRL 190
Query: 1538 XXVQDRGADGGAPRVALPLDRPPAALVPQVVGVAPCDQD 1422
+QD GA GGA RVALPLD P AALV QVVGVAP DQD
Sbjct: 189 HRLQDGGAHGGAARVALPLDGPAAALVAQVVGVAPGDQD 73
>gb|BI956324.1|BI956324 HVSMEn0002G07f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0002G07f,
mRNA sequence
Length = 440
Score = 270 bits (585), Expect = 2e-071
Identities = 109/146 (74%), Positives = 127/146 (86%)
Frame = +3 / +2
Query: 900 YLDALRKGFSTVMISYSSWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPG 1079
Y +A+ G TV SY SWNG+ MHAN NL+TG+LKD L F+GF ISDW+GIDR+T+P G
Sbjct: 2 YKNAMDNGVFTVRRSYCSWNGVNMHANQNLVTGYLKDTLKFKGFLISDWDGIDRITTPAG 181
Query: 1080 ANYSYSVQASILAGLDMIMVPNNYQNFITILTGHVNSGLIPMSRIDDAVTRILRVKFTMG 1259
++YSYSV+ASILAGLDMIMVPNNYQ FI+ILTGHVN G+IPMSRIDDAVTRILRVKFTMG
Sbjct: 182 SDYSYSVKASILAGLDMIMVPNNYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMG 361
Query: 1260 LFENPMPDPSLADQLGKQEHRDLARE 1337
LF+NP DP++A+QLG QEHRDLARE
Sbjct: 362 LFKNPYADPAMAEQLG*QEHRDLARE 439
Score = 220 bits (474), Expect = 3e-056
Identities = 99/143 (69%), Positives = 114/143 (79%)
Frame = -2 / -3
Query: 1336 SRARSLCSCFPSWSARLGSGMGFSNRPMVNLTRRIRVTASSILLIGIRPLFT*PVRMVMK 1157
S A+SLCSC+PS SA GS GF RPMVNLTRRIRVTASSILL+G+ P T PVRM+M
Sbjct: 438 SLAKSLCSCYPSCSAMAGSA*GFLKRPMVNLTRRIRVTASSILLMGMTPPLTCPVRMLMN 259
Query: 1156 FW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPSQSEIVKPWKLSLSLRKPVMRLWL 977
W*L GTMIMSRPAR+EA TE*E* P G+V LSMPSQSEI KP LS+SLR PV R WL
Sbjct: 258 CW*LFGTMIMSRPARMEALTE*E*SDPAGVVILSMPSQSEIKKPLNLSVSLRYPVTRFWL 79
Query: 976 ACILSPFQLE*EIMTVEKPLRSA 908
AC+L+PFQL+*+++TV+ PL A
Sbjct: 78 ACMLTPFQLQ*DLLTVKTPLSMA 10
Score = 168 bits (361), Expect = 1e-040
Identities = 72/125 (57%), Positives = 84/125 (67%)
Frame = -1 / -2
Query: 1274 GVLEQAHGELDAQNPSHGVVDPAHRDQAAVHVTRQDGDEVLVVVGHHDHVKASKNRSLHR 1095
GVLE+ HGELD Q+P HG+VDPAH D AAV + QD DE+LVVV HHDHVKA KN S R
Sbjct: 376 GVLEETHGELDPQDPGHGIVDPAHGDDAAVDMPGQDADELLVVVRHHDHVKAGKNGSFDR 197
Query: 1094 VGVVRPWRAGDPVDALPIRDXXXXXXXXXXXXXCDEVVVGVHFEPVPAGVGDHDGGEALA 915
VGVVR R GDPV+A+P+ D DEV+VGVH +PVPA VG DG +A+
Sbjct: 196 VGVVRSGRGGDPVNAVPV*DQEALEFERVLEVSGDEVLVGVHVDPVPAAVGPPDGEDAVV 17
Query: 914 ERVQV 900
V V
Sbjct: 16 HGVLV 2
>gb|BM098044.2|BM098044 EBpi03_SQ002_G06_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_G06 5', mRNA sequence
Length = 471
Score = 205 bits (442), Expect(3) = 3e-071
Identities = 81/102 (79%), Positives = 87/102 (85%)
Frame = +3 / +1
Query: 1434 GSHADNLGYQCGGWTIEWQGDXXXXXXXXXXLDAVKAAVDPSTEVVFAESPDAEFVRSGG 1613
GSHADNLGYQCGGWTIEWQGD L+AVKAAVDPST VVFAE+PDAEFV+SGG
Sbjct: 163 GSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGG 342
Query: 1614 FSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRC 1739
FSYAIVAVGEHPYTETKGD++NLTIP+PG STVQ VC VRC
Sbjct: 343 FSYAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRC 468
Score = 180 bits (387), Expect(3) = 9e-058
Identities = 76/102 (74%), Positives = 80/102 (78%)
Frame = -2 / -2
Query: 1738 HRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPLLTNSASGLSANTTSV 1559
HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTAT+A EKPPLLTNSASG SANTT+V
Sbjct: 467 HRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTATMA*EKPPLLTNSASGFSANTTTV 288
Query: 1558 DGSTAAFTAXXXXXXXXXXXXXPCHSIVHPPHWYPRLSAWLP 1433
DGSTAAFTA PCHS+V PPHW PRLSAWLP
Sbjct: 287 DGSTAAFTASRMVVPTVVRPVSPCHSMVQPPHW*PRLSAWLP 162
Score = 124 bits (265), Expect = 2e-027
Identities = 61/95 (64%), Positives = 66/95 (69%)
Frame = -1 / -1
Query: 1718 RLYGARPGVRDRQVHAVALGLRVRVLAHGHDRVREAAAPDELGVGALREXXXXXXXXXXX 1539
RL+GA+ G+RD QV VALGLRVRVLAHG+D V EAAA DEL VG L E
Sbjct: 447 RLHGAQAGLRDGQVQVVALGLRVRVLAHGNDGVGEAAALDELRVGVLGEHHDRRRVHGRF 268
Query: 1538 XXVQDRGADGGAPRVALPLDRPPAALVPQVVGVAP 1434
+QD GA GGA RVALPLD P AALV QVVGVAP
Sbjct: 267 HRLQDGGAHGGAARVALPLDGPAAALVAQVVGVAP 163
Score = 69.3 bits (145), Expect(3) = 3e-071
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +3 / +2
Query: 1281 DPSLADQLGKQEHRDLAREAVRKSLVLLKNGK 1376
DP++A+QLGKQEHRDLAREA RKSLVLLKNGK
Sbjct: 5 DPAMAEQLGKQEHRDLAREAARKSLVLLKNGK 100
Score = 53.8 bits (111), Expect(3) = 9e-058
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = -2 / -1
Query: 1375 LPFLSSTSDLRTASRARSLCSCFPSWSARLGS 1280
LPF SSTSD AS A+SLCSCFPS SA GS
Sbjct: 99 LPFFSSTSDFLAASLAKSLCSCFPSCSAMAGS 4
Score = 35.0 bits (70), Expect(3) = 3e-071
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / +2
Query: 1383 DAPLLPLPKKAARILV 1430
DAPLLPLPKKA +ILV
Sbjct: 110 DAPLLPLPKKAPKILV 157
Score = 30.4 bits (60), Expect(3) = 9e-058
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 1429 TRILAAFLGRGSSGAS 1382
TRIL AFLG G SGAS
Sbjct: 156 TRILGAFLGSGRSGAS 109
>gb|BU973151.1|BU973151 HB23O18r BC Hordeum vulgare subsp. vulgare cDNA clone HB23O18
5-PRIME, mRNA sequence
Length = 515
Score = 269 bits (581), Expect = 6e-071
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +3 / +3
Query: 1605 SGGFSYAIVAVGEHPYTETKGDSMNLTIPDPGPSTVQTVCAAVRCVTVLISGRPVVIQPF 1784
SGGFSYAIVAVGEHPYTETKGD++NLTIP+PG STVQ VC VRC TVLISGRPVV+QP
Sbjct: 12 SGGFSYAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPL 191
Query: 1785 LGAMDAVVAAWLPGTEGQGVTDVLFGDYGFTGKLPRTWFRSVDQLPMNYGDAHYDPLFPL 1964
L A DA+VAAWLPG+EGQGVTD LFGD+GFTG+LPRTWF+SVDQLPMN GDAHYDPLF L
Sbjct: 192 LAASDALVAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRL 371
Query: 1965 GFGLTT 1982
G+GLTT
Sbjct: 372 GYGLTT 389
Score = 217 bits (469), Expect = 2e-055
Identities = 91/113 (80%), Positives = 95/113 (84%)
Frame = -2 / -2
Query: 1942 CASP*FIGSWSTDLNHVRGSFPVNP*SPNSTSVTPWPSVPGSQAATTASMAPRNGCITTG 1763
CASP FIGSWSTDLNHVRGS PVNP SPNS SVTP PS PGS AAT+AS A +GC TTG
Sbjct: 349 CASPTFIGSWSTDLNHVRGSLPVNPKSPNSASVTPCPSEPGSHAATSASEAASSGCTTTG 170
Query: 1762 RPLMSTVTHRTAAHTVCTVLGPGSGIVRFMLSPLVSVYGCSPTATIAYEKPPL 1604
RPLMSTV HRT HT CTVL PGSG+VRF LSPLVSVYGCSPTAT+A EKPPL
Sbjct: 169 RPLMSTVAHRTPPHTACTVLRPGSGMVRFRLSPLVSVYGCSPTATMA*EKPPL 11
>gb|CA006690.1|CA006690 HU05G22r HU Hordeum vulgare subsp. vulgare cDNA clone HU05G22
5-PRIME, mRNA sequence
Length = 608
Score = 209 bits (450), Expect(2) = 1e-070
Identities = 81/152 (53%), Positives = 109/152 (71%)
Frame = +3 / +3
Query: 771 AAGKDKVAACAKHFVGDGGTQNGINENNTIIDRQGLISIHMPAYLDALRKGFSTVMISYS 950
A+ +D V ACAKHFVGDGGT GINE NTI + L IHM Y D + +G +TVM SYS
Sbjct: 150 ASVRDNVLACAKHFVGDGGTAKGINEGNTICSPEDLERIHMTPYPDCMTQGVATVMASYS 329
Query: 951 SWNGLKMHANHNLITGFLKDRLNFQGFTISDWEGIDRVTSPPGANYSYSVQASILAGLDM 1130
WNG +H++H+L+T LK +L F+GF +SDWEGIDR+ P G++Y Y + S++AG+DM
Sbjct: 330 QWNGEPLHSSHHLLTDVLKGKLGFEGFVVSDWEGIDRLCEPRGSDYRYCIAQSVIAGMDM 509
Query: 1131 IMVPNNYQNFITILTGHVNSGLIPMSRIDDAV 1226
IM+P+ ++ F+ L V +G IP+SRIDDAV
Sbjct: 510 IMIPHRFEKFLEDLVSLVETGEIPISRIDDAV 605
Score = 121 bits (259), Expect(2) = 8e-032
Identities = 68/153 (44%), Positives = 84/153 (54%)
Frame = -2 / -2
Query: 1225 TASSILLIGIRPLFT*PVRMVMKFW*LLGTMIMSRPARIEACTE*E*FAPGGLVTLSMPS 1046
TASSI IGI P+ T R F L G +I+S PA + + * P G +LS+PS
Sbjct: 604 TASSIRDIGISPVSTKDTRSSKNFSNL*GIIIISIPAITDCAMQYR*SDPRGSQSLSIPS 425
Query: 1045 QSEIVKPWKLSLSLRKPVMRLWLACILSPFQLE*EIMTVEKPLRSASR*AGMWMLIRPCR 866
QS+ P K +L R V + WL C SPF E*+ MTV P S MW+L +
Sbjct: 424 QSDTTNPSKPNLPFRTSVSKWWLECNGSPFH*E*DAMTVATP*VIQSGYGVMWILSKSSG 245
Query: 865 SMMVLFSLMPFCVPPSPTKCLAHAATLSFPAAK 767
MV SL+P VPPSPTKCLA A+TLS A+
Sbjct: 244 EQMVFPSLIPLAVPPSPTKCLAQASTLSLTEAR 146
Score = 79.9 bits (168), Expect(2) = 1e-070
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3 / +3
Query: 636 VCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVPQNFTSGMPFAA 776
VCRDPRWGRCYESYSED IV+++T ++ GLQG P + G PF A
Sbjct: 12 VCRDPRWGRCYESYSEDPEIVRSLTTIVTGLQGQPPADHPHGQPFLA 152
Score = 37.3 bits (75), Expect(2) = 8e-032
Identities = 18/29 (62%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 732 PAGPG*AQSWPARYGGPRCSSRSTGPTSD 646
PAG S AR GPRCSSRS PTSD
Sbjct: 108 PAGR*QLWSTSARSPGPRCSSRSISPTSD 22
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 809,667,871
Number of Sequences: 312970
Number of extensions: 12475562
Number of successful extensions: 118618
Number of sequences better than 1.0e-020: 159
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 28578203511
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)