TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.1
(1225 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 155 2e-089
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 204 1e-073
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 139 3e-073
gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedl... 125 1e-068
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 163 2e-066
gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, dro... 125 5e-065
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 139 1e-061
gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedl... 150 3e-061
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 196 5e-060
gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA li... 125 6e-060
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 163 5e-059
gb|BE216122.2|BE216122 HV_CEb0009I06f Hordeum vulgare seedl... 94 5e-054
gb|BE216371.2|BE216371 HV_CEb0010F03f Hordeum vulgare seedl... 94 7e-054
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 210 9e-054
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 210 9e-054
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 163 7e-053
gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedl... 112 8e-052
gb|BE213990.1|BE213990 HV_CEb0001N13f Hordeum vulgare seedl... 94 5e-051
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 108 8e-050
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 157 2e-049
gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedl... 91 5e-048
gb|BF623642.2|BF623642 HVSMEa0003E14f Hordeum vulgare seedl... 125 8e-048
gb|BG300488.1|BG300488 HVSMEb0017D20f Hordeum vulgare seedl... 103 6e-045
gb|BM369392.2|BM369392 EBem07_SQ003_H07_R embryo, 28 DPA, n... 120 8e-045
gb|BF627814.2|BF627814 HVSMEb0005N23f Hordeum vulgare seedl... 94 3e-044
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 115 5e-044
gb|BM368400.2|BM368400 EBem08_SQ002_B18_R embryo, 40 DPA, n... 112 7e-044
gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. v... 131 2e-043
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 108 6e-043
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 106 8e-043
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 115 4e-042
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 104 5e-041
gb|BQ765750.1|BQ765750 EBro03_SQ008_F04_R root, 3 week, wat... 94 2e-040
gb|BE216858.2|BE216858 HV_CEb0011N12f Hordeum vulgare seedl... 92 7e-040
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 115 2e-038
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 115 6e-038
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 115 8e-038
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 110 1e-037
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 89 3e-037
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 115 1e-036
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 115 1e-036
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 115 1e-036
gb|BE559172.3|BE559172 HV_CEb0023M17f Hordeum vulgare seedl... 105 1e-036
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 68 2e-036
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 115 2e-036
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 115 4e-036
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 115 5e-036
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 115 5e-036
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 77 6e-036
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 108 8e-036
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 111 8e-036
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 108 8e-036
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 111 1e-035
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 110 2e-035
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 112 2e-035
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 115 6e-035
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 115 6e-035
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 115 6e-035
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 108 1e-034
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 72 1e-034
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 108 1e-034
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 113 1e-034
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 115 2e-034
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 106 4e-034
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 74 9e-034
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 72 9e-034
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 74 9e-034
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 115 1e-033
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 103 1e-033
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 113 2e-033
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 67 2e-033
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 109 3e-033
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 109 3e-033
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 108 8e-033
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 108 8e-033
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 108 9e-033
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 108 9e-033
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 110 2e-032
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 111 2e-032
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 99 8e-032
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 105 8e-032
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 74 1e-031
gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedl... 89 1e-031
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 74 1e-031
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 74 2e-031
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 70 2e-031
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 106 7e-031
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 106 7e-031
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 83 8e-031
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 108 8e-031
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 104 2e-030
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 99 3e-030
gb|BM369786.2|BM369786 EBem07_SQ004_J18_R embryo, 28 DPA, n... 86 3e-030
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 96 5e-030
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 98 1e-029
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 98 1e-029
gb|BM097408.2|BM097408 EBem07_SQ001_P19_R embryo, 28 DPA, n... 86 1e-029
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 74 2e-029
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 96 2e-029
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 74 3e-029
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 74 3e-029
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 74 5e-029
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 115 6e-029
gb|BI949350.1|BI949350 HVSMEl0013H11f Hordeum vulgare spike... 59 4e-028
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 88 5e-028
gb|BE214536.1|BE214536 HV_CEb0003L19f Hordeum vulgare seedl... 74 7e-028
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 108 7e-028
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 74 8e-028
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 74 8e-028
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 87 1e-027
gb|BF622695.2|BF622695 HVSMEa0007O13f Hordeum vulgare seedl... 79 1e-027
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 75 2e-027
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 74 7e-027
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 71 7e-027
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 58 8e-027
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 93 8e-027
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 111 1e-026
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 81 2e-026
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 102 3e-026
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 74 6e-026
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 75 8e-026
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 82 1e-025
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 74 1e-025
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 74 1e-025
gb|BJ448252.1|BJ448252 BJ448252 K. Sato unpublished cDNA li... 116 2e-025
gb|BJ455971.1|BJ455971 BJ455971 K. Sato unpublished cDNA li... 116 2e-025
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 74 2e-025
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 74 2e-025
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 74 2e-025
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 74 2e-025
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 106 3e-025
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 71 5e-025
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 115 6e-025
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 74 2e-024
gb|BM444091.1|BM444091 EBem09_SQ004_C05_R embryo, 1 Day ger... 73 4e-024
gb|BM444155.1|BM444155 EBem09_SQ004_F06_R embryo, 1 Day ger... 73 4e-024
gb|BM444185.1|BM444185 EBem09_SQ004_G13_R embryo, 1 Day ger... 73 4e-024
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 74 5e-024
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 111 6e-024
gb|BJ464879.1|BJ464879 BJ464879 K. Sato unpublished cDNA li... 100 8e-024
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 72 8e-024
gb|BU986660.1|BU986660 HF12I18r HF Hordeum vulgare subsp. v... 100 8e-024
gb|BU986619.1|BU986619 HF12G18r HF Hordeum vulgare subsp. v... 100 8e-024
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 74 8e-024
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 68 1e-023
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 66 4e-023
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 67 5e-023
gb|BG417280.2|BG417280 HVSMEk0017B12f Hordeum vulgare testa... 97 5e-023
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 70 7e-023
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 78 7e-023
gb|AJ461109.1|AJ461109 AJ461109 S00002 Hordeum vulgare subs... 68 1e-022
gb|AJ461110.1|AJ461110 AJ461110 S00002 Hordeum vulgare subs... 68 1e-022
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 86 1e-022
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 67 3e-022
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 106 3e-022
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 106 3e-022
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 68 4e-022
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 68 4e-022
gb|BM369656.2|BM369656 EBem07_SQ004_D22_R embryo, 28 DPA, n... 86 4e-022
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 64 6e-022
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 69 7e-022
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 69 7e-022
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 64 8e-022
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 65 9e-022
gb|BI954237.1|BI954237 HVSMEm0016M07f Hordeum vulgare green... 59 2e-021
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 67 2e-021
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 65 3e-021
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 102 3e-021
>gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P16f, mRNA sequence
Length = 725
Score = 155 bits (334), Expect(4) = 2e-089
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = -3 / +1
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 495
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL P VA D +AFK A
Sbjct: 340 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNTPENVAHDPEVAFKAA 519
Query: 494 LWFWMNNVHRVMPQGFGATIRAIN 423
LWFWMNNV V+P+GFGAT RAIN
Sbjct: 520 LWFWMNNVKHVLPRGFGATTRAIN 591
Score = 125 bits (268), Expect(4) = 2e-089
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +1
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 94 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 273
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 274 AHVTHETGHMCYIEEI 321
Score = 113 bits (241), Expect(3) = 7e-050
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = +1 / -1
Query: 400 FPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAG 579
FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P PA
Sbjct: 614 FPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGVLSPSNPTLFPAA 435
Query: 580 P*L*FHEICSGPRP*YFCPAAHGHC 654
P*L*FH CSGPRP*Y P HGHC
Sbjct: 434 P*L*FHVSCSGPRP*YPFPEVHGHC 360
Score = 95.0 bits (201), Expect(3) = 7e-050
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 311 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 132
Query: 880 PLKNASLTTLAT 915
PLK AS+TT +T
Sbjct: 131 PLKKASVTTPST 96
Score = 58.3 bits (121), Expect(4) = 2e-089
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +1
Query: 1031 KFGYCGTTDDYCGDGCQSGPC 969
++GYCGTTD YCGDGCQSGPC
Sbjct: 1 RYGYCGTTDAYCGDGCQSGPC 63
Score = 48.3 bits (99), Expect(4) = 2e-089
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3 / +2
Query: 419 ALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
A N MNAR GYY+ YC+Q +PG +LTC*
Sbjct: 593 AASATAGNSXXMNARAGYYRAYCKQFGFNPGNSLTC* 703
Score = 28.6 bits (56), Expect(3) = 7e-050
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / -3
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFI 387
*QVRL PG +C Q **P RAF+
Sbjct: 702 *QVRLFPGLKPNCLQ*AR**PARAFM 625
>gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D10f, mRNA sequence
Length = 617
Score = 204 bits (440), Expect(2) = 1e-073
Identities = 73/120 (60%), Positives = 91/120 (75%)
Frame = -3 / +2
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 212 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 391
Query: 488 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
FWM NVH+V+PQGFGAT AING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 392 FWMTNVHQVLPQGFGATTSAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 571
Score = 149 bits (319), Expect(2) = 1e-050
Identities = 69/119 (57%), Positives = 78/119 (65%)
Frame = +1 / -3
Query: 295 QELLA*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCT 474
+ + *QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CT
Sbjct: 585 RSIQT*QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCT 406
Query: 475 LFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 651
L IQNQ+A N SCAT G +SPL PA P*L*FH CSGPRP*Y P HGH
Sbjct: 405 LVIQNQNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 229
Score = 93.6 bits (198), Expect(2) = 1e-073
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 8 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 178
Score = 71.6 bits (150), Expect(2) = 1e-050
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -3
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 165 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 7
>gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. vulgare cDNA clone HX10F18
5-PRIME, mRNA sequence
Length = 613
Score = 139 bits (299), Expect(4) = 3e-073
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = -3 / +1
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 495
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 334 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 513
Query: 494 LWFWMNNVHRVMPQ 453
LWFWMNNV +V+P+
Sbjct: 514 LWFWMNNVKQVLPR 555
Score = 125 bits (268), Expect(4) = 3e-073
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +1
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 88 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 267
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 268 AHVTHETGHMCYIEEI 315
Score = 97.7 bits (207), Expect(2) = 3e-042
Identities = 43/66 (65%), Positives = 44/66 (66%)
Frame = +1 / -3
Query: 457 GITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCP 636
G T TLFIQNQSA LNA + SCAT G SP P PA P*L*FH CSGPRP*Y P
Sbjct: 551 GRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP*YPFP 372
Query: 637 AAHGHC 654
HGHC
Sbjct: 371 EVHGHC 354
Score = 95.0 bits (201), Expect(2) = 3e-042
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1 / -3
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 305 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 126
Query: 880 PLKNASLTTLAT 915
PLK AS+TT +T
Sbjct: 125 PLKKASVTTPST 90
Score = 46.0 bits (94), Expect(4) = 3e-073
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +1
Query: 1016 GTTDDYCGDGCQSGPC 969
GTTD YCGDGCQSGPC
Sbjct: 10 GTTDAYCGDGCQSGPC 57
Score = 22.1 bits (42), Expect(4) = 3e-073
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / +2
Query: 449 FGATIRAINGALECNGNN 396
FGAT RAIN GN+
Sbjct: 560 FGATTRAINSGECNGGNS 613
>gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016O17f, mRNA sequence
Length = 843
Score = 125 bits (268), Expect(3) = 1e-068
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +2
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 242 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 421
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 422 AHVTHETGHMCYIEEI 469
Score = 95.0 bits (201), Expect(3) = 4e-031
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 459 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 280
Query: 880 PLKNASLTTLAT 915
PLK AS+TT +T
Sbjct: 279 PLKKASVTTPST 244
Score = 88.1 bits (186), Expect(3) = 1e-068
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -3 / +2
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQD 519
YCD QWPC +G+ YYGRGPLQ++WNYNY AG+ F GL +P + AQD
Sbjct: 488 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYRAAGKSFRFYGLTNPGKGAQD 643
Score = 85.8 bits (181), Expect(3) = 1e-068
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +2
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 113 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 211
Score = 56.1 bits (116), Expect(3) = 4e-031
Identities = 25/45 (55%), Positives = 26/45 (57%)
Frame = +1 / -1
Query: 520 SCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGHC 654
SCA G SP PA *L*FH C+GPRP*Y P HGHC
Sbjct: 642 SCAPFPGFVSP*NLKLFPAAL*L*FHVSCNGPRP*YPFPEVHGHC 508
Score = 22.1 bits (42), Expect(3) = 4e-031
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 472 TLFIQNQSAVLN 507
TLFI NQS LN
Sbjct: 689 TLFIPNQSPALN 654
>gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31c19 3', mRNA sequence
Length = 537
Score = 163 bits (350), Expect(3) = 2e-066
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -2
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 495
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 425 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 246
Query: 494 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 390
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 245 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 141
Score = 113 bits (242), Expect(3) = 2e-041
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +1 / +1
Query: 391 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 570
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 142 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 321
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGHC 654
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 322 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 405
Score = 65.2 bits (136), Expect(3) = 2e-066
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 413 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
ECNG N A MNAR GYY+ YC+Q VDPG +LTC*
Sbjct: 167 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC* 63
Score = 64.3 bits (134), Expect(3) = 2e-066
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -2
Query: 782 GGTEVEGKREIAAFFAHVTHETGHFCYISEI 690
G T +GKREIAAFFAHVTHETGH CYI EI
Sbjct: 536 GRTTDDGKREIAAFFAHVTHETGHMCYIEEI 444
Score = 51.9 bits (107), Expect(3) = 2e-041
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPP 783
M* CPVSCVTCAKKAAIS LPS+ V P
Sbjct: 454 M*HMCPVSCVTCAKKAAISLLPSSVVRP 537
Score = 42.3 bits (86), Expect(3) = 2e-041
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 414
*QVRL PGST +C Q **P RAF+ A PLHS
Sbjct: 64 *QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 168
>gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_K12 5', mRNA sequence
Length = 592
Score = 125 bits (268), Expect(3) = 5e-065
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +3
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 234 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 413
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 414 AHVTHETGHMCYIEEI 461
Score = 95.0 bits (201), Expect(2) = 4e-029
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 451 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 272
Query: 880 PLKNASLTTLAT 915
PLK AS+TT +T
Sbjct: 271 PLKKASVTTPST 236
Score = 85.8 bits (181), Expect(3) = 5e-065
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +3
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 105 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 203
Score = 76.2 bits (160), Expect(3) = 5e-065
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -3 / +3
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGR 567
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+
Sbjct: 480 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGK 587
Score = 53.8 bits (111), Expect(2) = 4e-029
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / -1
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGHC 654
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 583 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 500
>gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023K15f, mRNA sequence
Length = 551
Score = 139 bits (299), Expect(3) = 1e-061
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = -3 / -3
Query: 683 SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAF 504
S YCD +N +WPC AG+ YYGRGPLQ SWNYNYG AG+ +GF+GL DP+ VA+ V+AF
Sbjct: 480 SKNYCDPTNTEWPCVAGKGYYGRGPLQFSWNYNYGAAGQSLGFDGLNDPDAVARSPVLAF 301
Query: 503 KTALWFWMNNVHRVMPQGFG 444
+ ALW+WMN+VH V+ G G
Sbjct: 300 QAALWYWMNSVHDVIVSGQG 241
Score = 100 bits (212), Expect(3) = 1e-061
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -3 / -3
Query: 464 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC*A 306
V QGFGATIRAINGALECNG NP +N RV YYKQ+CQQ VDPG +LTC*A
Sbjct: 255 VSGQGFGATIRAINGALECNGKNPTAVNDRVAYYKQFCQQFGVDPGTSLTC*A 97
Score = 91.3 bits (193), Expect(2) = 8e-036
Identities = 44/69 (63%), Positives = 45/69 (65%)
Frame = +1 / +2
Query: 445 PKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP* 624
P P +T CTLFIQ QSA NA T AT GS SP KP PA P*L*FHE CSGPRP*
Sbjct: 242 PWPETMTSCTLFIQYQSAAWNAKTGLRATASGSLSPSKPRLCPAAP*L*FHENCSGPRP* 421
Query: 625 YFCPAAHGH 651
PA HGH
Sbjct: 422 *PFPATHGH 448
Score = 79.9 bits (168), Expect(2) = 8e-036
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1 / +2
Query: 307 A*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKP 453
A*QVRL PGST +CWQ CL** TR+ G PLHS APLMALMVAP P
Sbjct: 98 A*QVRLVPGSTPNCWQNCL**ATRSLTAVGFLPLHSSAPLMALMVAPNP 244
Score = 36.8 bits (74), Expect(3) = 1e-061
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 749 AAFFAHVTHETGHFCYISEINKS 681
AAFFAHV T FCYI EI ++
Sbjct: 550 AAFFAHVNQRTIKFCYIDEIKRA 482
>gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009D03f, mRNA sequence
Length = 557
Score = 150 bits (322), Expect(3) = 3e-061
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = -3 / +1
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 307 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 486
Query: 488 FWMNNVHRVMPQGFGATIRAING 420
FWM NVH+V+PQGFGAT RAING
Sbjct: 487 FWMTNVHQVLPQGFGATTRAING 555
Score = 109 bits (233), Expect(3) = 1e-042
Identities = 48/77 (62%), Positives = 52/77 (67%)
Frame = +1 / -1
Query: 421 PLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHE 600
PL+AL+VAP PCG T CTL IQNQ+A N SCAT G +SPL PA P*L*FH
Sbjct: 554 PLIALVVAPNPCGRTWCTLVIQNQNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHV 375
Query: 601 ICSGPRP*YFCPAAHGH 651
CSGPRP*Y P HGH
Sbjct: 374 SCSGPRP*YPFPEVHGH 324
Score = 93.6 bits (198), Expect(3) = 3e-061
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +1
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 103 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 273
Score = 71.6 bits (150), Expect(3) = 1e-042
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 260 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 102
Score = 31.3 bits (62), Expect(3) = 1e-042
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 865 AWFLMPLKNASLTTLAT 915
AW L+P KNAS+TTL+T
Sbjct: 92 AWDLIPSKNASVTTLST 42
Score = 30.9 bits (61), Expect(3) = 3e-061
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +1
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 43 VESVVTDAFFDGIKSQA 93
>gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012G06f, mRNA sequence
Length = 767
Score = 196 bits (423), Expect(2) = 5e-060
Identities = 72/120 (60%), Positives = 90/120 (75%)
Frame = -3 / -1
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D+++ + PC + + YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 512 DSNHPE*PCTSRKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 333
Query: 488 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 332 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 153
Score = 144 bits (310), Expect(2) = 3e-036
Identities = 68/119 (57%), Positives = 77/119 (64%)
Frame = +1 / +1
Query: 295 QELLA*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCT 474
+ + *QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CT
Sbjct: 139 RSIQT*QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCT 318
Query: 475 LFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 651
L IQNQ+A N SCAT G +SPL PA P*L*FH CSGPRP*Y HGH
Sbjct: 319 LVIQNQNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFREVHGH 495
Score = 55.6 bits (115), Expect(2) = 5e-060
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -3 / -1
Query: 824 AFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
+FL YP F + + + EI AFFAHVT +TGH CYI EI+
Sbjct: 683 SFLFGAQAYPRFRERHHDRQRQEEITAFFAHVTQKTGHMCYIEEID 546
Score = 27.6 bits (54), Expect(2) = 3e-036
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 700 M*QKCPVSCVTCAKKAAIS 756
M* CPV VT AKKA IS
Sbjct: 559 M*HMCPVFWVTWAKKAVIS 615
>gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 5', mRNA sequence
Length = 558
Score = 125 bits (268), Expect(3) = 6e-060
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +2
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 227 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 406
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 407 AHVTHETGHMCYIEEI 454
Score = 95.0 bits (201), Expect(2) = 6e-026
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 444 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 265
Query: 880 PLKNASLTTLAT 915
PLK AS+TT +T
Sbjct: 264 PLKKASVTTPST 229
Score = 85.8 bits (181), Expect(3) = 6e-060
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +2
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 98 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 196
Score = 59.3 bits (123), Expect(3) = 6e-060
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3 / +2
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWN 591
YCD QWPC +G+ YYGRGPLQ++WN
Sbjct: 473 YCDRKYTQWPCTSGKGYYGRGPLQLTWN 556
Score = 43.2 bits (88), Expect(2) = 6e-026
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 589 *FHEICSGPRP*YFCPAAHGHC 654
*FH CSGPRP*Y P HGHC
Sbjct: 558 *FHVSCSGPRP*YPFPEVHGHC 493
>gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 3', mRNA sequence
Length = 633
Score = 163 bits (350), Expect(3) = 5e-059
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -2
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 495
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 569 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 390
Query: 494 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 390
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 389 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 285
Score = 113 bits (242), Expect(3) = 7e-035
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +1 / +1
Query: 391 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 570
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 286 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 465
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGHC 654
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 466 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 549
Score = 65.7 bits (137), Expect(3) = 5e-059
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 413 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
ECNG N A MNAR GYY+ YCQQ VDPG +LTC*
Sbjct: 311 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC* 207
Score = 47.8 bits (98), Expect(3) = 7e-035
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 414
*QVRL PGST +CWQ **P RAF+ A PLHS
Sbjct: 208 *QVRLFPGSTPNCWQ*AR**PPRAFMAAEFPPLHS 312
Score = 38.6 bits (78), Expect(3) = 5e-059
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 734 HVTHETGHFCYISEI 690
HVTHETGH CYI EI
Sbjct: 632 HVTHETGHMCYIEEI 588
Score = 24.4 bits (47), Expect(3) = 7e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 700 M*QKCPVSCVT 732
M* CPVSCVT
Sbjct: 598 M*HMCPVSCVT 630
>gb|BE216122.2|BE216122 HV_CEb0009I06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009I06f, mRNA sequence
Length = 569
Score = 93.6 bits (198), Expect(4) = 5e-054
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 272 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 442
Score = 79.4 bits (167), Expect(4) = 5e-054
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -3 / +2
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGCQPN CCSK+GYCGT YCG C SGPC
Sbjct: 83 QNCGCQPNECCSKYGYCGTNSSYCGTDCASGPC 181
Score = 71.6 bits (150), Expect(4) = 1e-027
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -3
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 429 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 271
Score = 64.8 bits (135), Expect(4) = 5e-054
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = -3 / +2
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYG 579
D+++ +WPC +G+ YYGRGPLQ++WNYNYG
Sbjct: 476 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYG 565
Score = 44.6 bits (91), Expect(4) = 1e-027
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +1 / -3
Query: 580 P*L*FHEICSGPRP*YFCPAAHGH 651
P*L*FH CSGPRP*Y P HGH
Sbjct: 564 P*L*FHVSCSGPRP*YPFPEVHGH 493
Score = 31.3 bits (62), Expect(4) = 1e-027
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 1030 LLQQKLGWQPQFC 1068
LLQ GWQPQFC
Sbjct: 120 LLQHSFGWQPQFC 82
Score = 31.3 bits (62), Expect(4) = 1e-027
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -3
Query: 865 AWFLMPLKNASLTTLAT 915
AW L+P KNAS+TTL+T
Sbjct: 261 AWDLIPSKNASVTTLST 211
Score = 30.9 bits (61), Expect(4) = 5e-054
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 212 VESVVTDAFFDGIKSQA 262
>gb|BE216371.2|BE216371 HV_CEb0010F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010F03f, mRNA sequence
Length = 953
Score = 93.6 bits (198), Expect(4) = 7e-054
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 296 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 466
Score = 80.3 bits (169), Expect(4) = 7e-054
Identities = 29/59 (49%), Positives = 31/59 (52%)
Frame = -3 / +2
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
MA +P AQNCGCQPN CCSK+GYCGT YCG C SGPC
Sbjct: 29 MAKSPMSILALGLAALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGPC 205
Score = 71.6 bits (150), Expect(4) = 4e-028
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -3
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 453 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 295
Score = 63.4 bits (132), Expect(4) = 7e-054
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -3 / +2
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYG 579
D + +WPC +G+ YYGRGPLQ++WNYNYG
Sbjct: 500 DXHHPEWPCTSGKGYYGRGPLQLTWNYNYG 589
Score = 44.6 bits (91), Expect(4) = 4e-028
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +1 / -3
Query: 580 P*L*FHEICSGPRP*YFCPAAHGH 651
P*L*FH CSGPRP*Y P HGH
Sbjct: 588 P*L*FHVSCSGPRP*YPFPEVHGH 517
Score = 32.7 bits (65), Expect(4) = 4e-028
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1 / -3
Query: 1030 LLQQKLGWQPQFCXXXXXXXXXXXXXXXXXXXILGAFAI 1146
LLQ GWQPQFC +G FA+
Sbjct: 144 LLQHSFGWQPQFCAATSPAPDRTSAASPRARIDMGDFAM 28
Score = 31.3 bits (62), Expect(4) = 4e-028
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -3
Query: 865 AWFLMPLKNASLTTLAT 915
AW L+P KNAS+TTL+T
Sbjct: 285 AWDLIPSKNASVTTLST 235
Score = 30.9 bits (61), Expect(4) = 7e-054
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 236 VESVVTDAFFDGIKSQA 286
>gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 5', mRNA sequence
Length = 532
Score = 210 bits (454), Expect = 9e-054
Identities = 75/120 (62%), Positives = 93/120 (77%)
Frame = -3 / +3
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG +GFNGL +P VAQD + F+ A W
Sbjct: 21 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 200
Query: 488 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 201 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 380
Score = 154 bits (331), Expect = 9e-037
Identities = 70/119 (58%), Positives = 80/119 (67%)
Frame = +1 / -1
Query: 295 QELLA*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCT 474
+ + *QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CT
Sbjct: 394 RSIQT*QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCT 215
Query: 475 LFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 651
L IQNQ+A N SCAT+ G +SPL P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 214 LVIQNQNAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 38
>gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 3', mRNA sequence
Length = 505
Score = 210 bits (454), Expect = 9e-054
Identities = 75/120 (62%), Positives = 93/120 (77%)
Frame = -3 / -1
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG +GFNGL +P VAQD + F+ A W
Sbjct: 484 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 305
Query: 488 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 304 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 125
Score = 154 bits (331), Expect = 9e-037
Identities = 70/119 (58%), Positives = 80/119 (67%)
Frame = +1 / +3
Query: 295 QELLA*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCT 474
+ + *QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CT
Sbjct: 111 RSIQT*QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCT 290
Query: 475 LFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 651
L IQNQ+A N SCAT+ G +SPL P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 291 LVIQNQNAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 467
>gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31e07 3', mRNA sequence
Length = 536
Score = 163 bits (350), Expect(2) = 7e-053
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -1
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 495
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 509 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 330
Query: 494 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 390
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 329 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 225
Score = 113 bits (242), Expect(2) = 3e-031
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +1 / +1
Query: 391 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 570
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 226 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 405
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGHC 654
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 406 PAAP*L*FHVSCSGPRP*YPXPEVHGHC 489
Score = 65.2 bits (136), Expect(2) = 7e-053
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 413 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
ECNG N A MNAR GYY+ YC+Q VDPG +LTC*
Sbjct: 251 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC* 147
Score = 42.3 bits (86), Expect(2) = 3e-031
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1 / +1
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 414
*QVRL PGST +C Q **P RAF+ A PLHS
Sbjct: 148 *QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 252
>gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015P16f, mRNA sequence
Length = 478
Score = 112 bits (239), Expect(3) = 8e-052
Identities = 45/76 (59%), Positives = 53/76 (69%)
Frame = -3 / +1
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V V ++A FNGIK++AG+GC GK+FYTR FL+ P G T GKREIA FF
Sbjct: 94 SVEGVFTEALFNGIKSRAGNGCAGKSFYTRP*FLAGARANPNLRKGRTTDNGKREIAVFF 273
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 274 AHVTHETGHMCYIEEI 321
Score = 85.4 bits (180), Expect(2) = 5e-023
Identities = 41/72 (56%), Positives = 48/72 (66%)
Frame = +1 / -3
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHPLPAWFLM 879
M* CPVSCVT AKK AIS LP + V P+ K G+ RN RV*K LP+HPLPA L+
Sbjct: 311 M*HMCPVSCVTWAKKTAISLLPLSVVRPFLKLGFARAPARNYGRV*KLLPAHPLPARDLI 132
Query: 880 PLKNASLTTLAT 915
PL AS+ T +T
Sbjct: 131 PLNKASVKTPST 96
Score = 72.5 bits (152), Expect(3) = 8e-052
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -3 / +1
Query: 674 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADP 537
YCD WPC +G+ YYG G LQ++WNYN AG +GF+GL +P
Sbjct: 340 YCDRKCTHWPCTSGKGYYGPGALQLTWNYNSPAAGNSVGFDGLNNP 477
Score = 58.3 bits (121), Expect(3) = 8e-052
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +1
Query: 1031 KFGYCGTTDDYCGDGCQSGPC 969
++GYCGTTD YCGDGCQSGPC
Sbjct: 1 RYGYCGTTDAYCGDGCQSGPC 63
Score = 42.8 bits (87), Expect(2) = 5e-023
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = +1 / -3
Query: 538 GSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGHC 654
G SP P PA L*FH C P P*Y P HG C
Sbjct: 476 GLLSPSNPTLFPAAGEL*FHVSCRAPGP*YPFPEVHGQC 360
>gb|BE213990.1|BE213990 HV_CEb0001N13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001N13f, mRNA sequence
Length = 972
Score = 93.6 bits (198), Expect(5) = 5e-051
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 329 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 499
Score = 77.6 bits (163), Expect(5) = 5e-051
Identities = 29/59 (49%), Positives = 30/59 (50%)
Frame = -3 / +2
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
MA +P AQNCGCQPN CCSK GYCGT YCG C SGPC
Sbjct: 62 MAKSPMSILALGLAALVLSGAGLVAAQNCGCQPNECCSKDGYCGTNSSYCGTDCASGPC 238
Score = 71.6 bits (150), Expect(4) = 7e-025
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 486 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 328
Score = 47.8 bits (98), Expect(5) = 5e-051
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3 / +2
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAG 570
D+++ +WPC +G+ YGRGPLQ++W G G
Sbjct: 533 DSNHPEWPCTSGKGDYGRGPLQLTWTTTTGGRG 631
Score = 33.1 bits (66), Expect(4) = 7e-025
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1 / -1
Query: 1027 NLLQQKLGWQPQFCXXXXXXXXXXXXXXXXXXXILGAFAI 1146
+LLQ GWQPQFC +G FA+
Sbjct: 180 SLLQHSFGWQPQFCAATSPAPDRTSAASPRARIDMGDFAM 61
Score = 33.1 bits (66), Expect(4) = 7e-025
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / -1
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGH 651
P P + H CSGPRP* P HGH
Sbjct: 630 PRPPVVVVHVSCSGPRP*SPFPEVHGH 550
Score = 31.3 bits (62), Expect(4) = 7e-025
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 865 AWFLMPLKNASLTTLAT 915
AW L+P KNAS+TTL+T
Sbjct: 318 AWDLIPSKNASVTTLST 268
Score = 30.9 bits (61), Expect(5) = 5e-051
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 269 VESVVTDAFFDGIKSQA 319
Score = 26.3 bits (51), Expect(5) = 5e-051
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3 / +1
Query: 539 PNRVAQDAVIAFKTALWFWMNN 474
P AQD + F+ W WM N
Sbjct: 658 PGDGAQDPGLTFQARXWCWMTN 723
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 108 bits (230), Expect(5) = 8e-050
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 1128 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 1301
Score = 52.8 bits (109), Expect(5) = 8e-050
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 312
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 1392 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 1532
Score = 52.8 bits (109), Expect(5) = 8e-050
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + + GF G KRE+AAF A +HET
Sbjct: 891 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 1028
Score = 31.3 bits (62), Expect(5) = 8e-050
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 1055 CQPNFCCSKFGYCGTT 1008
C CCS+FG+CG+T
Sbjct: 690 CPNCLCCSRFGWCGST 737
Score = 26.7 bits (52), Expect(5) = 8e-050
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +3
Query: 1001 YCGDGCQS 978
YCGDGCQS
Sbjct: 741 YCGDGCQS 764
>gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K13 5', mRNA sequence
Length = 403
Score = 157 bits (337), Expect(2) = 2e-049
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = -3 / +2
Query: 668 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 489
D S+ +WPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK ALW
Sbjct: 5 DRSHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALW 184
Query: 488 FWMNNVHRVMPQGFGATIRAINGALECNGNNPA 390
FWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 185 FWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 283
Score = 109 bits (233), Expect(2) = 1e-025
Identities = 52/87 (59%), Positives = 55/87 (63%)
Frame = +1 / -2
Query: 391 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 570
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 282 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 103
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGH 651
PA P*L*FH CSGPRP*Y P HGH
Sbjct: 102 PAAP*L*FHVSCSGPRP*YPFPEVHGH 22
Score = 59.3 bits (123), Expect(2) = 2e-049
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / +2
Query: 413 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
ECNG N A MNAR YY+ YC++ VDPG LTC*
Sbjct: 257 ECNGGNSAAMNARARYYRAYCKKFGVDPGHRLTC* 361
Score = 27.6 bits (54), Expect(2) = 1e-025
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1 / -2
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 414
*QV L PGST + Q * RAF+ A PLHS
Sbjct: 360 *QVSLCPGSTPNFLQ*AR*YLARAFMAAEFPPLHS 256
>gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020C16f, mRNA sequence
Length = 789
Score = 90.9 bits (192), Expect(4) = 5e-048
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR + L P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 302 GCPGKSFYTRQSLLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 472
Score = 80.3 bits (169), Expect(4) = 5e-048
Identities = 29/59 (49%), Positives = 31/59 (52%)
Frame = -3 / +2
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
MA +P AQNCGCQPN CCSK+GYCGT YCG C SGPC
Sbjct: 35 MAKSPMSILALGLAALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGPC 211
Score = 68.9 bits (144), Expect(4) = 1e-022
Identities = 32/53 (60%), Positives = 35/53 (66%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ N RV*K LP HP
Sbjct: 459 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSSNDWRV*KLLPGHP 301
Score = 46.4 bits (95), Expect(4) = 5e-048
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -3 / +3
Query: 680 NAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNR 531
N A R ++YYGR PLQ++WNYNY + +GL +P R
Sbjct: 495 NTATTAITRSGRAPLWKEYYGRRPLQLTWNYNYWAGRGEAQVHGLDNPKR 644
Score = 32.7 bits (65), Expect(4) = 1e-022
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1 / -1
Query: 1030 LLQQKLGWQPQFCXXXXXXXXXXXXXXXXXXXILGAFAI 1146
LLQ GWQPQFC +G FA+
Sbjct: 150 LLQHSFGWQPQFCAATSPAPDRTSAASPRARIDMGDFAM 34
Score = 31.3 bits (62), Expect(4) = 1e-022
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 865 AWFLMPLKNASLTTLAT 915
AW L+P KNAS+TTL+T
Sbjct: 291 AWDLIPSKNASVTTLST 241
Score = 30.9 bits (61), Expect(4) = 5e-048
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 242 VESVVTDAFFDGIKSQA 292
Score = 28.6 bits (56), Expect(4) = 1e-022
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1 / -3
Query: 538 GSASPLKPMSLPAGP*L*FHEICSGPRP*Y 627
G +SP S *L*FH CSG RP*Y
Sbjct: 637 GLSSP*T*ASPRPAQ*L*FHVSCSGRRP*Y 548
>gb|BF623642.2|BF623642 HVSMEa0003E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003E14f, mRNA sequence
Length = 488
Score = 125 bits (268), Expect(2) = 8e-048
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -3 / +3
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 249 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 428
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 429 AHVTHETGHMCYIEEI 476
Score = 85.8 bits (181), Expect(2) = 8e-048
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +3
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 120 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 218
>gb|BG300488.1|BG300488 HVSMEb0017D20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017D20f, mRNA sequence
Length = 876
Score = 103 bits (219), Expect(3) = 6e-045
Identities = 42/68 (61%), Positives = 50/68 (73%)
Frame = -3 / +2
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR FL+ P G T GKREIAAFF
Sbjct: 242 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPWFLAGARANPNLGKGRTTDNGKREIAAFF 421
Query: 737 AHVTHETG 714
AHVTHETG
Sbjct: 422 AHVTHETG 445
Score = 85.8 bits (181), Expect(3) = 6e-045
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +2
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 113 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 211
Score = 36.3 bits (73), Expect(3) = 6e-045
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 635 GQKYYGRGPLQISWNYNYG 579
G+ YYGRGPL ++W YG
Sbjct: 609 GEGYYGRGPLHLTWTTTYG 665
>gb|BM369392.2|BM369392 EBem07_SQ003_H07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_H07 5', mRNA sequence
Length = 494
Score = 120 bits (256), Expect(2) = 8e-045
Identities = 47/76 (61%), Positives = 57/76 (75%)
Frame = -3 / +2
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
++ VV+ AFFNGIK++AG+GC GK+FYTR +FL+ P F G T + KREIAAFF
Sbjct: 260 SMEGVVTKAFFNGIKSRAGNGCAGKSFYTRRSFLAGARANPNFGKGRTTDDAKREIAAFF 439
Query: 737 AHVTHETGHFCYISEI 690
AHVTHETGH CYI EI
Sbjct: 440 AHVTHETGHMCYIEEI 487
Score = 81.3 bits (171), Expect(2) = 8e-045
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
Q CGC+ N CCS++GYCGTTD YCGDGC+SGPC
Sbjct: 122 QKCGCRANECCSRYGYCGTTDAYCGDGCKSGPC 220
>gb|BF627814.2|BF627814 HVSMEb0005N23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005N23f, mRNA sequence
Length = 751
Score = 93.6 bits (198), Expect(5) = 3e-044
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +3
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 309 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 479
Score = 71.6 bits (150), Expect(4) = 2e-024
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +1 / -1
Query: 700 M*QKCPVSCVTCAKKAAISRLPSTSVPPWAKPGYLLTALRNALRV*KFLPSHP 858
M* CPVSCVT AKKAAIS LPS+ V P+ K G+ RN RV*K LP HP
Sbjct: 466 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 308
Score = 51.5 bits (106), Expect(5) = 3e-044
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -3 / +3
Query: 683 SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAG 570
++ YC+ + QWPC+ G+ YGRGP+ ++WN G G
Sbjct: 495 ASEYCNTNYPQWPCSQGKGDYGRGPVHLTWNSTRGGRG 608
Score = 43.7 bits (89), Expect(5) = 3e-044
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -3 / +2
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFG 1023
MA +P AQNCGCQPN CCSK+G
Sbjct: 41 MAKSPMSILALGLAALVLSGAGLAAAQNCGCQPNECCSKYG 163
Score = 37.3 bits (75), Expect(4) = 2e-024
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1 / -1
Query: 571 PAGP*L*FHEICSGPRP*YFCPAAHGHC 654
P P + FH C+GPRP* P HGHC
Sbjct: 607 PRPPRVEFHVRCTGPRP*SPFPWEHGHC 524
Score = 33.1 bits (66), Expect(5) = 3e-044
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / +3
Query: 1025 GYCGTTDDYCGDGCQSGPC 969
G GT YCG C SGPC
Sbjct: 162 GSGGTNSSYCGTDCASGPC 218
Score = 32.7 bits (65), Expect(4) = 2e-024
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1 / -2
Query: 1030 LLQQKLGWQPQFCXXXXXXXXXXXXXXXXXXXILGAFAI 1146
LLQ GWQPQFC +G FA+
Sbjct: 156 LLQHSFGWQPQFCAAASPAPDRTSAASPRARIDMGDFAM 40
Score = 30.9 bits (61), Expect(5) = 3e-044
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 249 VESVVTDAFFDGIKSQA 299
Score = 25.8 bits (50), Expect(4) = 2e-024
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / -1
Query: 874 LMPLKNASLTTLAT 915
L+P KNAS+TTL+T
Sbjct: 289 LIPSKNASVTTLST 248
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 115 bits (245), Expect(3) = 5e-044
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 342 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 515
Score = 58.8 bits (122), Expect(3) = 5e-044
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 105 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 242
Score = 43.2 bits (88), Expect(3) = 5e-044
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3 / +3
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 312
GFG ING +EC +++ R+G YK+ L V G NL C
Sbjct: 606 GFGVITNIINGGIECGHGQDSRVADRIGLYKRC*DMLGVGYGDNLDC 746
>gb|BM368400.2|BM368400 EBem08_SQ002_B18_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_B18 5', mRNA sequence
Length = 454
Score = 112 bits (239), Expect(2) = 7e-044
Identities = 44/69 (63%), Positives = 54/69 (78%)
Frame = -3 / +3
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V VV++AFFNGIK++AG+GC GK+FYTR +FL+ P F G T +GKREIAAFF
Sbjct: 243 SVEGVVTEAFFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFF 422
Query: 737 AHVTHETGH 711
AHVTHETGH
Sbjct: 423 AHVTHETGH 449
Score = 85.8 bits (181), Expect(2) = 7e-044
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +3
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC+ N CCS++GYCGTTD YCGDGCQSGPC
Sbjct: 114 QNCGCRANECCSRYGYCGTTDAYCGDGCQSGPC 212
>gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K07
3-PRIME, mRNA sequence
Length = 576
Score = 131 bits (280), Expect(2) = 2e-043
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = -3 / -2
Query: 620 GRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHRVMPQGFGA 441
GRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK ALWFWMNNV +V+P+GFGA
Sbjct: 575 GRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALWFWMNNVKQVLPRGFGA 396
Query: 440 TIRAINGALECNGNNPA 390
T RAIN GN+ A
Sbjct: 395 TTRAINSGECNGGNSAA 345
Score = 95.9 bits (203), Expect(2) = 1e-027
Identities = 46/77 (59%), Positives = 49/77 (63%)
Frame = +1 / +1
Query: 391 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 570
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 346 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 525
Query: 571 PAGP*L*FHEICSGPRP 621
PA P*L*FH CSGPRP
Sbjct: 526 PAAP*L*FHVSCSGPRP 576
Score = 65.7 bits (137), Expect(2) = 2e-043
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 413 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 309
ECNG N A MNAR GYY+ YCQQ VDPG +LTC*
Sbjct: 371 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC* 267
Score = 47.8 bits (98), Expect(2) = 1e-027
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 310 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 414
*QVRL PGST +CWQ **P RAF+ A PLHS
Sbjct: 268 *QVRLFPGSTPNCWQ*AR**PPRAFMAAEFPPLHS 372
>gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004I09f, mRNA sequence
Length = 933
Score = 108 bits (230), Expect(3) = 6e-043
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 566 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 739
Score = 57.9 bits (120), Expect(3) = 6e-043
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3 / +2
Query: 1055 CQPNFCCSKFGYCGTTDDYCGDGCQS 978
C CCS+FG+CG+T DYCGDGCQS
Sbjct: 125 CPNCLCCSRFGWCGSTSDYCGDGCQS 202
Score = 52.8 bits (109), Expect(3) = 6e-043
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + + GF G KRE+AAF A +HET
Sbjct: 329 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 466
>gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022E17f, mRNA sequence
Length = 815
Score = 106 bits (226), Expect(3) = 8e-043
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3 / +2
Query: 650 WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
WPCA G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKTA+WFWM
Sbjct: 533 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 703
Score = 55.1 bits (114), Expect(3) = 8e-043
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -3 / +2
Query: 905 VVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVT 726
V D F + ++ + C + FYT AFL+A + +P F G KRE+AAFF +
Sbjct: 242 VSRDLFERFLLHRNDAACLARGFYTYDAFLAAASAFPAFGTTGDLDTRKREVAAFFGQTS 421
Query: 725 HET 717
HET
Sbjct: 422 HET 430
Score = 51.5 bits (106), Expect(3) = 8e-043
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 1055 CQPNFCCSKFGYCGTTDDYCGDGCQS 978
C CCS+FG+CG+T YCG GCQS
Sbjct: 119 CADCMCCSQFGFCGSTSAYCGGGCQS 196
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 115 bits (245), Expect(3) = 4e-042
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 208 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 381
Score = 53.3 bits (110), Expect(3) = 4e-042
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 312
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 472 GFGVITNIINGGIECGRGQDSRVADRIGFYKRYCDILGVGYGNNLDC 612
Score = 42.3 bits (86), Expect(3) = 4e-042
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3 / +1
Query: 824 AFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
AF++A +PGF G+ KRE+AAF A +HET
Sbjct: 1 AFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 108
>gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004K07f, mRNA sequence
Length = 937
Score = 104 bits (222), Expect(3) = 5e-041
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN 477
QWPCA G+ YYGRGP+Q+S NYNY PAGR IG L +P+ VA D ++FKTA+WFWMN
Sbjct: 560 QWPCAPGKSYYGRGPIQLSHNYNYWPAGRAIGVYLLRNPDLVATDPNVSFKTAMWFWMN 736
Score = 55.1 bits (114), Expect(3) = 5e-041
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +2
Query: 1055 CQPNFCCSKFGYCGTTDDYCGDGCQS 978
C CCS+F +CG+T DYCGDGCQS
Sbjct: 119 CPNCLCCSRFSWCGSTSDYCGDGCQS 196
Score = 52.8 bits (109), Expect(3) = 5e-041
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + + GF G KRE+AAF A +HET
Sbjct: 323 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 460
>gb|BQ765750.1|BQ765750 EBro03_SQ008_F04_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_F04 5', mRNA sequence
Length = 549
Score = 93.6 bits (198), Expect(3) = 2e-040
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = -3 / +3
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFFAHVT ETGH CYI EI+
Sbjct: 309 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 479
Score = 80.3 bits (169), Expect(3) = 2e-040
Identities = 29/59 (49%), Positives = 31/59 (52%)
Frame = -3 / +3
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
MA +P AQNCGCQPN CCSK+GYCGT YCG C SGPC
Sbjct: 42 MAKSPMSILALGLAALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGPC 218
Score = 30.9 bits (61), Expect(3) = 2e-040
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +3
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 249 VESVVTDAFFDGIKSQA 299
>gb|BE216858.2|BE216858 HV_CEb0011N12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011N12f, mRNA sequence
Length = 953
Score = 91.8 bits (194), Expect(3) = 7e-040
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = -3 / +2
Query: 857 GCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEIN 687
GC GK+FYTR +FL P F G T +GKREIAAFF HVT ETGH CYI EI+
Sbjct: 296 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFGHVTQETGHMCYIKEID 466
Score = 80.3 bits (169), Expect(3) = 7e-040
Identities = 29/59 (49%), Positives = 31/59 (52%)
Frame = -3 / +2
Query: 1145 MANAPRIXXXXXXXXXXXXXXXXXXAQNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
MA +P AQNCGCQPN CCSK+GYCGT YCG C SGPC
Sbjct: 29 MAKSPMSILALGLAALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGPC 205
Score = 30.9 bits (61), Expect(3) = 7e-040
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 914 VANVVSDAFFNGIKNQA 864
V +VV+DAFF+GIK+QA
Sbjct: 236 VESVVTDAFFDGIKSQA 286
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 115 bits (245), Expect(3) = 2e-038
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 426 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 599
Score = 58.8 bits (122), Expect(3) = 2e-038
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 189 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 326
Score = 24.4 bits (47), Expect(3) = 2e-038
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3 / +3
Query: 452 GFGATIRAINGALEC 408
GFG ING +EC
Sbjct: 690 GFGVITNIINGGIEC 734
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 115 bits (245), Expect(3) = 6e-038
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 158 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 331
Score = 53.3 bits (110), Expect(3) = 6e-038
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +2
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 312
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 422 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 562
Score = 28.1 bits (55), Expect(3) = 6e-038
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 761 KREIAAFFAHVTHET 717
KRE+AAF A +HET
Sbjct: 14 KREVAAFLAQTSHET 58
>gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025B12f, mRNA sequence
Length = 691
Score = 115 bits (245), Expect(2) = 8e-038
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 426 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 599
Score = 62.9 bits (131), Expect(2) = 8e-038
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = -3 / +3
Query: 890 FFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
F+ + ++ S C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 153 FYRMLLHRNDSACQAKGFYTYDAFVAAASAFPGFGSTGSADAHKREVAAFLAQTSHET 326
>gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N17f, mRNA sequence
Length = 968
Score = 110 bits (234), Expect(3) = 1e-037
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S N NYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 444 QWPCAPGKRYYGRGPIQLSHN*NYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 617
Score = 58.8 bits (122), Expect(3) = 1e-037
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 198 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 335
Score = 26.3 bits (51), Expect(3) = 1e-037
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3 / +1
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQ 357
GFG ING ++C + G+YK+
Sbjct: 709 GFGVITHIINGGIQCGHRPRNRFXHPNGFYKR 804
>gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK01K20r 3', mRNA sequence
Length = 652
Score = 88.6 bits (187), Expect(3) = 3e-037
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -3 / +2
Query: 650 WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKT 498
WPCA G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKT
Sbjct: 467 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKT 619
Score = 54.7 bits (113), Expect(3) = 3e-037
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = -3 / +2
Query: 905 VVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVT 726
V D F + ++ + C + FYT AFL+A +P F G KRE+AAFF +
Sbjct: 176 VSRDLFERFLLHRNDAACLARGFYTYDAFLAAAGAFPAFGTTGDLDTRKREVAAFFGQTS 355
Query: 725 HET 717
HET
Sbjct: 356 HET 364
Score = 51.0 bits (105), Expect(3) = 3e-037
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 1055 CQPNFCCSKFGYCGTTDDYCGDGCQS 978
C CCS+FG+CG+T YCG GCQS
Sbjct: 53 CANCMCCSQFGFCGSTSAYCGGGCQS 130
>gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N14f, mRNA sequence
Length = 805
Score = 115 bits (245), Expect(2) = 1e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 434 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 607
Score = 58.8 bits (122), Expect(2) = 1e-036
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +2
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 197 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 334
>gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006N24f, mRNA sequence
Length = 710
Score = 115 bits (245), Expect(2) = 1e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 429 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 602
Score = 58.8 bits (122), Expect(2) = 1e-036
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 192 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 115 bits (245), Expect(2) = 1e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 358 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 531
Score = 58.8 bits (122), Expect(2) = 1e-036
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +1
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 121 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 258
>gb|BE559172.3|BE559172 HV_CEb0023M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023M17f, mRNA sequence
Length = 532
Score = 105 bits (223), Expect(2) = 1e-036
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = -3 / +1
Query: 917 NVANVVSDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFF 738
+V +V+ AFF + +QA C K FYTR AFL+A+ YP F G++ + KREIAAFF
Sbjct: 262 SVPAIVTPAFFGALVSQAADDCAAKGFYTRDAFLTALGGYPAFGRTGSDDDSKREIAAFF 441
Query: 737 AHVTHETGHFCYISEIN 687
AHV HET FCYI EIN
Sbjct: 442 AHVNHETIKFCYIDEIN 492
Score = 68.9 bits (144), Expect(2) = 1e-036
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3 / +1
Query: 1067 QNCGCQPNFCCSKFGYCGTTDDYCGDGCQSGPC 969
QNCGC CC+++G+CGTT ++CG GC+SGPC
Sbjct: 139 QNCGCAATECCNRWGFCGTTREHCGTGCRSGPC 237
>gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101A21f, mRNA sequence
Length = 730
Score = 68.0 bits (142), Expect(4) = 2e-036
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = -3 / +1
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAG 570
QWPCA G++YYGRGP+Q+S NYNYGPAG
Sbjct: 364 QWPCAPGKRYYGRGPIQLSHNYNYGPAG 447
Score = 58.8 bits (122), Expect(4) = 2e-036
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +1
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + +PGF G+ KRE+AAF A +HET
Sbjct: 127 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 264
Score = 52.8 bits (109), Expect(4) = 2e-036
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -3 / +2
Query: 572 GRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
GR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 446 GRAIGVDLLANPDLVATDATVAFKTAIWFWM 538
Score = 29.5 bits (58), Expect(4) = 2e-036
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3 / +2
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGY 366
GFG ING +EC + + R+G+
Sbjct: 629 GFGVITNIINGGIECGHGQDSPVADRIGF 715
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 115 bits (245), Expect(3) = 2e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 73 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 246
Score = 53.3 bits (110), Expect(3) = 2e-036
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 452 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 312
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 477
Score = 22.6 bits (43), Expect(3) = 2e-036
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3 / +1
Query: 725 HETGHFCYISEINKSNAYCDAS 660
HE +C+ E S+ YC S
Sbjct: 4 HEAWGYCFKQERGASSDYCTPS 69
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 115 bits (245), Expect(2) = 4e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 441 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 614
Score = 57.0 bits (118), Expect(2) = 4e-036
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A +PGF G+ KRE+AAF A +HET
Sbjct: 204 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 341
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 115 bits (245), Expect(2) = 5e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 414 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 587
Score = 57.0 bits (118), Expect(2) = 5e-036
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -3 / +3
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A +PGF G+ KRE+AAF A +HET
Sbjct: 177 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 314
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 115 bits (245), Expect(2) = 5e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 275 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 448
Score = 57.0 bits (118), Expect(2) = 5e-036
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -3 / +2
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A +PGF G+ KRE+AAF A +HET
Sbjct: 38 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 175
>gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012P08f, mRNA sequence
Length = 710
Score = 76.7 bits (161), Expect(3) = 6e-036
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -3 / +3
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADP 537
QWPCA G+KY+GRGP+QIS NYNYGPAGR IG + L +P
Sbjct: 594 QWPCAPGKKYFGRGPIQISHNYNYGPAGRAIGADLLNNP 710
Score = 57.9 bits (120), Expect(3) = 6e-036
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -3 / +2
Query: 860 SGCEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
+ C+ K FY AF++A N +PGFA G KRE+AAF A HET
Sbjct: 350 AACQAKGFYNYGAFVAAANSFPGFATTGGTDVRKREVAAFLAQTFHET 493
Score = 55.1 bits (114), Expect(3) = 6e-036
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +2
Query: 1055 CQPNFCCSKFGYCGTTDDYCGDGCQS 978
C CCS+FG+CG+T DYCG GCQS
Sbjct: 152 CPNCLCCSRFGFCGSTSDYCGTGCQS 229
>gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014A17f, mRNA sequence
Length = 872
Score = 108 bits (230), Expect(3) = 8e-036
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +2
Query: 653 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 480
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 398 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 571
Score = 52.8 bits (109), Expect(3) = 8e-036
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +2
Query: 854 CEGKNFYTRSAFLSAVNKYPGFAHGGTEVEGKREIAAFFAHVTHET 717
C+ K FYT AF++A + + GF G KRE+AAF A +HET
Sbjct: 161 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 298
Score = 28.1 bits (55), Expect(3) = 8e-036
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / +2
Query: 1010 TDDYCGDGCQS 978
T YCGDGCQS
Sbjct: 2 TSAYCGDGCQS 34
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 373,234,336
Number of Sequences: 312970
Number of extensions: 5122217
Number of successful extensions: 53787
Number of sequences better than 1.0e-020: 220
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14793932226
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)