TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161200.2.2
(1078 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB040769.1| Hordeum vulgare mRNA for endo-1,4-beta-gluc... 506 e-162
gb|AV916435.1|AV916435 AV916435 K. Sato unpublished cDNA li... 436 e-122
gb|BG418595.1|BG418595 HVSMEk0023G06f Hordeum vulgare testa... 387 e-121
gb|BE601584.3|BE601584 HVSMEh0098M02f Hordeum vulgare 5-45 ... 409 e-117
gb|AW982232.3|AW982232 HVSMEg0002G13f Hordeum vulgare pre-a... 369 e-116
gb|AW983004.3|AW983004 HVSMEg0004M14f Hordeum vulgare pre-a... 418 e-116
gb|BU985662.1|BU985662 HF08E02r HF Hordeum vulgare subsp. v... 410 e-114
gb|AV923747.1|AV923747 AV923747 K. Sato unpublished cDNA li... 395 e-109
gb|AV927273.1|AV927273 AV927273 K. Sato unpublished cDNA li... 340 e-108
gb|BM097444.2|BM097444 EBro05_SQ003_F03_R root, 3 week, red... 379 e-104
gb|BE603205.3|BE603205 HVSMEh0102H23f Hordeum vulgare 5-45 ... 338 4e-092
gb|BJ448471.1|BJ448471 BJ448471 K. Sato unpublished cDNA li... 320 9e-087
gb|AV920035.1|AV920035 AV920035 K. Sato unpublished cDNA li... 221 9e-078
gb|AV917955.1|AV917955 AV917955 K. Sato unpublished cDNA li... 221 9e-078
gb|BJ456192.1|BJ456192 BJ456192 K. Sato unpublished cDNA li... 221 9e-078
gb|BU979160.1|BU979160 HA15F07r HA Hordeum vulgare subsp. v... 289 2e-077
gb|BQ760319.1|BQ760319 EBpi07_SQ003_L24_R pistil, 12 DPA, n... 130 2e-067
gb|BI956352.1|BI956352 HVSMEn0002L24f Hordeum vulgare rachi... 244 7e-064
gb|BQ768653.1|BQ768653 EBro08_SQ012_F07_R root, 3 week, dro... 240 9e-063
gb|BQ764603.1|BQ764603 EBca01_SQ004_I10_R carpel, pre-anthe... 197 1e-062
gb|AV912096.1|AV912096 AV912096 K. Sato unpublished cDNA li... 166 9e-062
gb|BI949643.1|BI949643 HVSMEl0015A22f Hordeum vulgare spike... 227 5e-061
gb|BU994975.1|BU994975 HM08M21r HM Hordeum vulgare subsp. v... 232 9e-061
gb|BQ765008.1|BQ765008 EBca01_SQ005_D16_R carpel, pre-anthe... 226 2e-058
gb|CB875548.1|CB875548 HX08K06w HX Hordeum vulgare subsp. v... 127 3e-053
gb|AV909996.1|AV909996 AV909996 K. Sato unpublished cDNA li... 201 5e-051
gb|AV930114.1|AV930114 AV930114 K. Sato unpublished cDNA li... 124 6e-049
gb|AV930104.1|AV930104 AV930104 K. Sato unpublished cDNA li... 120 1e-047
gb|AV930113.1|AV930113 AV930113 K. Sato unpublished cDNA li... 119 1e-047
gb|BU967340.1|BU967340 HB03P20r BC Hordeum vulgare subsp. v... 186 2e-046
gb|CB859220.1|CB859220 HI09M02w HI Hordeum vulgare subsp. v... 166 2e-044
gb|BF255699.3|BF255699 HVSMEf0007J01f Hordeum vulgare seedl... 158 6e-038
gb|CK125884.1|CK125884 BES1824111A2a04 BES1824 Hordeum vulg... 92 4e-029
gb|AL509770.1|AL509770 AL509770 Hordeum vulgare Barke devel... 54 2e-028
gb|BF260719.2|BF260719 HVSMEf0022M05f Hordeum vulgare seedl... 126 2e-028
gb|BF256953.2|BF256953 HVSMEf0011H11f Hordeum vulgare seedl... 75 7e-028
gb|BJ467008.1|BJ467008 BJ467008 K. Sato unpublished cDNA li... 79 2e-027
gb|BU985192.1|BU985192 HF06G12r HF Hordeum vulgare subsp. v... 79 2e-027
gb|BF259829.2|BF259829 HVSMEf0020G01f Hordeum vulgare seedl... 75 2e-027
gb|CK123410.1|CK123410 BES1824103p13 BES1824 Hordeum vulgar... 77 1e-026
gb|AJ434494.1|AJ434494 AJ434494 S00002 Hordeum vulgare subs... 106 2e-026
gb|BQ766009.1|BQ766009 EBro03_SQ008_D24_R root, 3 week, wat... 65 4e-026
gb|BI960651.1|BI960651 HVSMEn0025K02f Hordeum vulgare rachi... 65 1e-025
gb|BG369061.1|BG369061 HVSMEi0021J08f Hordeum vulgare 20 DA... 67 4e-025
gb|BU995458.1|BU995458 HM10F02r HM Hordeum vulgare subsp. v... 67 5e-025
gb|CA024900.1|CA024900 HZ50K09r HZ Hordeum vulgare subsp. v... 103 8e-025
gb|AL500279.1|AL500279 AL500279 Hordeum vulgare Barke etiol... 45 2e-024
gb|CK123273.1|CK123273 BES1824103c09 BES1824 Hordeum vulgar... 75 3e-024
gb|BQ755502.1|BQ755502 EBed07_SQ002_E24_R endosperm, 28 DPA... 67 4e-021
gb|CA019511.1|CA019511 HV12D10r HV Hordeum vulgare subsp. v... 63 7e-021
gb|CK122715.1|CK122715 BES1824105i22 BES1824 Hordeum vulgar... 63 1e-020
gb|BQ460303.1|BQ460303 HA06K13r HA Hordeum vulgare subsp. v... 63 1e-020
>dbj|AB040769.1| Hordeum vulgare mRNA for endo-1,4-beta-glucanase Cel1, complete cds
Length = 2442
Score = 506 bits (1098), Expect(4) = e-162
Identities = 198/223 (88%), Positives = 214/223 (95%)
Frame = +2 / +1
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPL
Sbjct: 1333 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPL 1512
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVV
Sbjct: 1513 QYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVV 1692
Query: 365 GFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDV 544
GFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+
Sbjct: 1693 GFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDI 1872
Query: 545 RTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 1873 RTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 2001
Score = 294 bits (636), Expect(3) = 2e-086
Identities = 133/220 (60%), Positives = 162/220 (73%)
Frame = -1 / -1
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 1992 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 1813
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PG 305
R TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L*
Sbjct: 1812 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LC 1633
Query: 304 KLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE* 125
KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE*
Sbjct: 1632 KLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE* 1453
Query: 124 IE*RQI*AHNIVGLVVECPQYFFVRVPWT*EESQPAEKNL 5
IE I*AH+IV LVVECP YFF+R+PW *EE QPAEKNL
Sbjct: 1452 IEYW*I*AHDIVSLVVECP*YFFIRIPWA*EEPQPAEKNL 1333
Score = 280 bits (605), Expect(4) = e-112
Identities = 122/137 (89%), Positives = 125/137 (91%)
Frame = -2 / -2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 1745 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 1566
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 1565 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 1386
Query: 57 S*GYPGLRKSLNLLRRT 7
S*GYPGLRKS NLLRRT
Sbjct: 1385 S*GYPGLRKSRNLLRRT 1335
Score = 205 bits (442), Expect(4) = 3e-067
Identities = 102/173 (58%), Positives = 116/173 (67%)
Frame = -3 / -3
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 1852 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 1673
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 1672 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 1493
Query: 164 G*VVLVLL**S*MN*IEADMST*HCRFGCGMSSVFLRKGTLDLGRVSTC*EEP 6
G*VV VLL**S*MN*I +MST*HC+FGCGMS +FL K TL LGR +TC*EEP
Sbjct: 1492 G*VVSVLL**S*MN*ILVNMST*HCQFGCGMSLIFLHKDTLGLGRAATC*EEP 1334
Score = 204 bits (441), Expect(4) = 2e-087
Identities = 93/138 (67%), Positives = 106/138 (76%)
Frame = +1 / +3
Query: 7 GSSQQVETLPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATS 186
GSSQQV LPK RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TS
Sbjct: 1335 GSSQQVAALPKPRVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTS 1514
Query: 187 VRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCG 366
VR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR G
Sbjct: 1515 VRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRG 1694
Query: 367 FRKQVPEAPSSQRRVDTS 420
F K+VP+A SSQR ++ S
Sbjct: 1695 FWKEVPQACSSQRGINPS 1748
Score = 133 bits (285), Expect(2) = 1e-055
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 1559 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 1738
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 1739 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 1918
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 1919 AWLQH*FL 1942
Score = 117 bits (250), Expect(4) = 2e-087
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 1800 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 1979
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 1980 EHHLLSSSPNVPDTPTTAVSLETLKNQ 2060
Score = 116 bits (248), Expect(4) = e-112
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / -2
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 2060 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 1881
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 1880 FVRISLKPSCLSGPATIAPTRILGFAFLDS 1791
Score = 103 bits (220), Expect(2) = 1e-055
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = +3 / +2
Query: 6 RFFSAG*DSS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
RFFSAG SS* QG L KKY*GHSTTK TM CAHI YSIHSTSLKED*YNSTMEG
Sbjct: 1334 RFFSAGCGSS*AQGILMKKY*GHSTTKLTMSCAHIYQYSIHSTSLKED*YNSTMEG 1501
Score = 52.4 bits (108), Expect(4) = 3e-067
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / -3
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 2047 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 1895
Score = 45.1 bits (92), Expect(4) = e-162
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 2180 SKDHKQKADNISLQSFYFCIGMTDHYK 2260
Score = 44.6 bits (91), Expect(4) = e-162
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / +1
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 2260 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 2391
Score = 44.1 bits (90), Expect(4) = e-112
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / -1
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 2391 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 2257
Score = 43.2 bits (88), Expect(3) = 2e-086
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -3 / -3
Query: 1013 KTICKGTISTKKNFTHELECQ*QQDPQKLAPRDAHSFRSMSDR 885
K KGTISTK+ L + QQ PQ L + AH+F+SM DR
Sbjct: 2392 KMTYKGTISTKRTSHVNLGYEEQQGPQNLVSQIAHNFQSMVDR 2264
Score = 42.3 bits (86), Expect(4) = 3e-067
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -2 / -2
Query: 999 RYHFYKKELHT*AGVPIATRPPKISSTRCTQLPIYV*QRI 880
RYHFYKK G+ TR K S T TQLP++ *Q I
Sbjct: 2378 RYHFYKKNFTRELGI*RTTRTSKFSFTNRTQLPVHG*QMI 2259
Score = 39.1 bits (79), Expect(4) = 2e-087
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / +3
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 2247 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 2381
Score = 37.3 bits (75), Expect(4) = e-162
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 1976 IRTPSSQQFPQCSRHPHHRRQLGNLEES 2059
Score = 35.9 bits (72), Expect(4) = e-112
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -2
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 2258 YNDPSYRYRSRNSVSLCCLLS 2196
Score = 30.4 bits (60), Expect(4) = 2e-087
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 2197 ESRQHKLTEFLLLYRYDGSL* 2259
Score = 29.9 bits (59), Expect(3) = 2e-086
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 877 ILICHIDTEIEAL*TYAVSF 818
I+I H DTE+E L* Y V F
Sbjct: 2257 IMIRHTDTEVETL*AYVVCF 2198
Score = 24.0 bits (46), Expect(4) = 3e-067
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 873 *SVILIQK*KLYKLM 829
*SVI IQK*KL KLM
Sbjct: 2253 *SVIPIQK*KLCKLM 2209
>gb|AV916435.1|AV916435 AV916435 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17d08 5', mRNA sequence
Length = 607
Score = 436 bits (947), Expect = e-122
Identities = 168/187 (89%), Positives = 180/187 (96%)
Frame = +2 / +3
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPL
Sbjct: 45 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPL 224
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVV
Sbjct: 225 QYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVV 404
Query: 365 GFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDV 544
GFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+
Sbjct: 405 GFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDI 584
Query: 545 RTNYNYT 565
RTNYNYT
Sbjct: 585 RTNYNYT 605
Score = 280 bits (605), Expect(2) = 4e-086
Identities = 122/137 (89%), Positives = 125/137 (91%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 457 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 278
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 277 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 98
Query: 57 S*GYPGLRKSLNLLRRT 7
S*GYPGLRKS NLLRRT
Sbjct: 97 S*GYPGLRKSRNLLRRT 47
Score = 257 bits (555), Expect = 1e-067
Identities = 115/186 (61%), Positives = 139/186 (74%)
Frame = -1 / -3
Query: 562 VVVVRADIFVAITPVGASHHCSDKDVRXXXXXXXXXVTSFAPILDAVVRYRRASVMRALR 383
V+V+ ADIF AI V S+HCSD+D+R TSFA I D V+R SVM L
Sbjct: 602 VIVICADIFEAIMLVRPSNHCSDEDIRVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLG 423
Query: 382 VLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKES 203
VL+S+TH+VAHL WVLA +V++L* KLAED CG+E+RS +PP +CS +I+++ R KE
Sbjct: 422 VLLSKTHDVAHLLWVLA*NVIKL*LCKLAEDICGIEIRSTIPPWCICSVQIISIQRGKEC 243
Query: 202 CVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI*AHNIVGLVVECPQYFFVRVPWT*EESQ 23
C+D VLKWLRPSMVELY SSFSEVE*IE I*AH+IV LVVECP YFF+R+PW *EE Q
Sbjct: 242 CIDDVLKWLRPSMVELYQSSFSEVE*IEYW*I*AHDIVSLVVECP*YFFIRIPWA*EEPQ 63
Query: 22 PAEKNL 5
PAEKNL
Sbjct: 62 PAEKNL 45
Score = 205 bits (442), Expect = 4e-052
Identities = 102/173 (58%), Positives = 116/173 (67%)
Frame = -3 / -2
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 564 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 385
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 384 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 205
Query: 164 G*VVLVLL**S*MN*IEADMST*HCRFGCGMSSVFLRKGTLDLGRVSTC*EEP 6
G*VV VLL**S*MN*I +MST*HC+FGCGMS +FL K TL LGR +TC*EEP
Sbjct: 204 G*VVSVLL**S*MN*ILVNMST*HCQFGCGMSLIFLHKDTLGLGRAATC*EEP 46
Score = 204 bits (441), Expect(2) = 6e-063
Identities = 93/138 (67%), Positives = 106/138 (76%)
Frame = +1 / +2
Query: 7 GSSQQVETLPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATS 186
GSSQQV LPK RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TS
Sbjct: 47 GSSQQVAALPKPRVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTS 226
Query: 187 VRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCG 366
VR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR G
Sbjct: 227 VRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRG 406
Query: 367 FRKQVPEAPSSQRRVDTS 420
F K+VP+A SSQR ++ S
Sbjct: 407 FWKEVPQACSSQRGINPS 460
Score = 119 bits (254), Expect(2) = 3e-051
Identities = 60/106 (56%), Positives = 68/106 (64%)
Frame = +3 / +1
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 271 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 450
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSA 548
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA
Sbjct: 451 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISA 588
Score = 103 bits (220), Expect(2) = 3e-051
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = +3 / +1
Query: 6 RFFSAG*DSS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
RFFSAG SS* QG L KKY*GHSTTK TM CAHI YSIHSTSLKED*YNSTMEG
Sbjct: 46 RFFSAGCGSS*AQGILMKKY*GHSTTKLTMSCAHIYQYSIHSTSLKED*YNSTMEG 213
Score = 59.3 bits (123), Expect(2) = 4e-086
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = -2 / -1
Query: 567 SV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
SV*L*FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 607 SV*L*FVRISLKPSCLSGPATIAPTRILGFAFLDS 503
Score = 57.0 bits (118), Expect(2) = 6e-063
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1 / +2
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLH 564
E KP*+P RSNG W QA*WLQR PH+LQLH
Sbjct: 512 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLH 604
>gb|BG418595.1|BG418595 HVSMEk0023G06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023G06f, mRNA sequence
Length = 815
Score = 387 bits (839), Expect(4) = e-121
Identities = 150/173 (86%), Positives = 164/173 (94%)
Frame = +2 / +3
Query: 155 QLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILG 334
QLNHG PQPLQY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILG
Sbjct: 3 QLNHGGPQPLQYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILG 182
Query: 335 KNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAG 514
KNP KMSYVVGFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAG
Sbjct: 183 KNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAG 362
Query: 515 PDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
PD+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 363 PDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 521
Score = 210 bits (453), Expect(2) = 1e-054
Identities = 94/170 (55%), Positives = 120/170 (70%)
Frame = -1 / -1
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 512 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 333
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PG 305
R TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L*
Sbjct: 332 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LC 153
Query: 304 KLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVEL 155
KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKWLRPSMVEL
Sbjct: 152 KLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVEL 3
Score = 174 bits (375), Expect(4) = 2e-077
Identities = 78/88 (88%), Positives = 78/88 (88%)
Frame = -2 / -2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 265 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 86
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSC 154
SR*S YREAR AALT Y*SG*G PWLSC
Sbjct: 85 SR*SAYREARNAALTTY*SG*GPPWLSC 2
Score = 133 bits (285), Expect = 2e-030
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / +1
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 79 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 258
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 259 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 438
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 439 AWLQH*FL 462
Score = 127 bits (271), Expect(2) = 3e-038
Identities = 65/124 (52%), Positives = 75/124 (60%)
Frame = -3 / -3
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 372 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 193
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 192 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 13
Query: 164 G*VV 153
G*VV
Sbjct: 12 G*VV 1
Score = 124 bits (266), Expect(2) = 5e-057
Identities = 56/89 (62%), Positives = 66/89 (74%)
Frame = +1 / +2
Query: 154 TTQPWKASATSVRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPW 333
TTQPW+AS TSVR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH
Sbjct: 2 TTQPWRASTTSVRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSR 181
Query: 334 QEPIEDELRCGFRKQVPEAPSSQRRVDTS 420
QEP +DELR GF K+VP+A SSQR ++ S
Sbjct: 182 QEPTKDELRRGFWKEVPQACSSQRGINPS 268
Score = 117 bits (250), Expect(2) = 5e-057
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / +2
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 320 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 499
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 500 EHHLLSSSPNVPDTPTTAVSLETLKNQ 580
Score = 116 bits (248), Expect(4) = 2e-077
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / -2
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 580 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 401
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 400 FVRISLKPSCLSGPATIAPTRILGFAFLDS 311
Score = 52.4 bits (108), Expect(2) = 3e-038
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / -3
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 567 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 415
Score = 40.5 bits (82), Expect(4) = e-121
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 815 RKADSISL*SFYFCINMTDQYK 880
++AD+ISL SFYFCI +TD YK
Sbjct: 655 QEADNISLQSFYFCIGLTDHYK 720
Score = 37.3 bits (75), Expect(4) = e-121
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 496 IRTPSSQQFPQCSRHPHHRRQLGNLEES 579
Score = 29.9 bits (59), Expect(4) = e-121
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2 / +3
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*S 976
I+CQ GSCV VEL F L + + HV*S
Sbjct: 720 IICQPWTGSCVPIVELNFEVLGGLISQVHV*S 815
Score = 29.9 bits (59), Expect(4) = 2e-077
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 878 YTDLSY*YRNRSSINLCCQL 819
Y D S YR+R+S++LCC L
Sbjct: 718 YNDPSNRYRSRNSVSLCCLL 659
Score = 26.7 bits (52), Expect(2) = 1e-054
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1 / -1
Query: 976 TSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
TSH++ + K K * + HT S LT+DL
Sbjct: 815 TSHVNLGYKTTKDLKI*FYNWHTTSSPWLTDDL 717
Score = 26.7 bits (52), Expect(4) = 2e-077
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 975 LHT*AGVPIATRPPKISSTRCTQLPIYV*QRI 880
LHT* R K SST TQLP++ *Q I
Sbjct: 814 LHT*TWDIRPPRTSKFSSTIGTQLPVHG*QMI 719
>gb|BE601584.3|BE601584 HVSMEh0098M02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098M02f, mRNA sequence
Length = 641
Score = 409 bits (888), Expect(2) = e-117
Identities = 160/184 (86%), Positives = 174/184 (94%)
Frame = +2 / +1
Query: 122 NSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRK 301
NSFNFTKGGLIQLNHG PQPLQY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRK
Sbjct: 1 NSFNFTKGGLIQLNHGGPQPLQYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRK 180
Query: 302 FARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKAN 481
FA+SQLDYILGKNP KMSYVVGFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKAN
Sbjct: 181 FAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKAN 360
Query: 482 PNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTI 661
PNILVGAMVAGPD+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ I KNTI
Sbjct: 361 PNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIYKNTI 540
Query: 662 FSAI 673
FSA+
Sbjct: 541 FSAV 552
Score = 228 bits (493), Expect = 3e-059
Identities = 104/181 (57%), Positives = 130/181 (71%)
Frame = -1 / -3
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 543 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 364
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PG 305
R TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L*
Sbjct: 363 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LC 184
Query: 304 KLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE* 125
KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE*
Sbjct: 183 KLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE* 4
Query: 124 I 122
I
Sbjct: 3 I 1
Score = 197 bits (425), Expect(2) = 2e-077
Identities = 88/98 (89%), Positives = 88/98 (89%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 296 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 117
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNE 124
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNE
Sbjct: 116 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNE 3
Score = 144 bits (310), Expect(2) = 2e-063
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = +1 / +3
Query: 124 FIQLH*RRTNTTQPWKASATSVRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQV 303
FIQLH*RRT+TTQPW+AS TSVR Q S PC S+ LS CR+ VVL T* L+HR PPQV
Sbjct: 3 FIQLH*RRTDTTQPWRASTTSVRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQV 182
Query: 304 CQVTARLHPWQEPIEDELRCGFRKQVPEAPSSQRRVDTS 420
C+VTA LH QEP +DELR GF K+VP+A SSQR ++ S
Sbjct: 183 CKVTA*LHSRQEPTKDELRRGFWKEVPQACSSQRGINPS 299
Score = 139 bits (299), Expect(2) = 3e-042
Identities = 74/134 (55%), Positives = 84/134 (62%)
Frame = -3 / -2
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 403 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 224
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 223 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 44
Query: 164 G*VVLVLL**S*MN 123
G*VV VLL**S*MN
Sbjct: 43 G*VVSVLL**S*MN 2
Score = 133 bits (285), Expect(2) = 6e-037
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 110 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 289
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 290 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 469
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 470 AWLQH*FL 493
Score = 118 bits (252), Expect(2) = 2e-063
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 351 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFNL* 530
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 531 EHHLLSSSPNVPDTPTTAVSLETLKNQ 611
Score = 112 bits (240), Expect(2) = 2e-077
Identities = 59/90 (65%), Positives = 63/90 (70%)
Frame = -2 / -1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFL + PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 611 LILQGFQADGGGGGVRNIGGTAEKMVFL*IEYLPVSMSAKEINAATRPAFAARVGSV*L* 432
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 431 FVRISLKPSCLSGPATIAPTRILGFAFLDS 342
Score = 52.8 bits (109), Expect(2) = 3e-042
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / -2
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 598 VSKLTAVVGVSGTLGELLRRWCSYKLNICQYRCQLKKSMLQPGQHLLQE*A 446
Score = 41.4 bits (84), Expect(2) = 6e-037
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +2
Query: 123 IHSTSLKED*YNSTMEG 173
IHSTSLKED*YNSTMEG
Sbjct: 2 IHSTSLKED*YNSTMEG 52
Score = 35.0 bits (70), Expect(2) = e-117
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3 / +2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS P R Q GN E+
Sbjct: 527 IRTPSSQQFPQCS*HPHHRRQLGNLEES 610
>gb|AW982232.3|AW982232 HVSMEg0002G13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002G13f, mRNA sequence
Length = 850
Score = 369 bits (800), Expect(3) = e-116
Identities = 143/165 (86%), Positives = 157/165 (95%)
Frame = +2 / +3
Query: 179 PLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSY 358
PLQY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSY
Sbjct: 3 PLQYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSY 182
Query: 359 VVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYK 538
VVGFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+K
Sbjct: 183 VVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFK 362
Query: 539 DVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
D+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 363 DIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 497
Score = 193 bits (415), Expect(2) = 2e-048
Identities = 86/162 (53%), Positives = 112/162 (69%)
Frame = -1 / -3
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 488 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 309
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PG 305
R TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L*
Sbjct: 308 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LC 129
Query: 304 KLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKW 179
KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKW
Sbjct: 128 KLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKW 3
Score = 156 bits (336), Expect(2) = 2e-064
Identities = 71/80 (88%), Positives = 71/80 (88%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 241 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 62
Query: 237 SR*SLYREARKAALTAY*SG 178
SR*S YREAR AALT Y*SG
Sbjct: 61 SR*SAYREARNAALTTY*SG 2
Score = 133 bits (285), Expect = 2e-030
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / +1
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 55 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 234
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 235 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 414
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 415 AWLQH*FL 438
Score = 112 bits (239), Expect(2) = 2e-034
Identities = 58/115 (50%), Positives = 68/115 (59%)
Frame = -3 / -2
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 348 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 169
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEV 180
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV
Sbjct: 168 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEV 4
Score = 111 bits (238), Expect(3) = 1e-051
Identities = 47/92 (51%), Positives = 62/92 (67%)
Frame = +1 / +2
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 296 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 475
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQYL*MF 747
EHHLL S +VP+ P + +ET+++ * F
Sbjct: 476 EHHLLSSSPNVPDTPTNGVRLETLKKSNS*TF 571
Score = 109 bits (233), Expect(2) = 2e-064
Identities = 54/69 (78%), Positives = 58/69 (84%)
Frame = -2 / -1
Query: 669 AEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTR 490
AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*FVR SL PS LSGPATIAPTR
Sbjct: 493 AEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L*FVRISLKPSCLSGPATIAPTR 314
Query: 489 MLGFAFFVS 463
+LGFAF S
Sbjct: 313 ILGFAFLDS 287
Score = 105 bits (223), Expect(3) = 1e-051
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +1 / +2
Query: 181 TSVRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELR 360
TSVR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR
Sbjct: 5 TSVRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELR 184
Query: 361 CGFRKQVPEAPSSQRRVDTS 420
GF K+VP+A SSQR ++ S
Sbjct: 185 RGFWKEVPQACSSQRGINPS 244
Score = 54.2 bits (112), Expect(3) = e-116
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +2 / +1
Query: 797 TAKARDRKADSISL*SFYFCINMTDQYKILCQT*IGSCVHRVELIFGGLVAI 952
TAK +RK D+ISL FYFC MTD YK +GS V V+L F LV +
Sbjct: 616 TAKTLNRKPDTISLQKFYFCFGMTDHYKKSVNHGLGSWVRIVKLKFEALVGL 771
Score = 54.2 bits (112), Expect(2) = 2e-034
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = -3 / -2
Query: 746 NIQRYCLSMVSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
N+Q + VS L G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 570 NVQEFDFFKVSNLTPLVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 391
Score = 35.9 bits (72), Expect(3) = e-116
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3 / +1
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREAIPLNV 746
IRTPSS +F +CS+ P +R + GN + LN+
Sbjct: 472 IRTPSSQQFPQCSRHPHQRRKVGNLEKIKFLNI 570
Score = 25.8 bits (50), Expect(3) = 1e-051
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1 / +3
Query: 796 YSEGQRQES*QHKFIELLFLYQYDRSV*DPLSDIDRKLCASRGANFWGSC 945
YS+ +Q++ H ++L L++ DRS+* KL A+ G C
Sbjct: 615 YSKDPKQKARHH*LTKVLLLFRDDRSL*KICQPWTGKLGANCETKI*GPC 764
Score = 23.5 bits (45), Expect(2) = 2e-048
Identities = 19/39 (48%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 945 TRPPKISSTRCTQLPIYV*QRILY*SVILIQK*KLYKLM 829
TR S T TQLP L *SVI QK* KLM
Sbjct: 764 TRASNFSFTIRTQLPSPWLTDFL**SVIPKQK*NFCKLM 648
>gb|AW983004.3|AW983004 HVSMEg0004M14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004M14f, mRNA sequence
Length = 562
Score = 418 bits (906), Expect = e-116
Identities = 162/187 (86%), Positives = 176/187 (94%)
Frame = +2 / +1
Query: 77 HNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPG 256
HNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPLQY VNAAFLASLY+DYL+ ADTPG
Sbjct: 1 HNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPLQYVVNAAFLASLYADYLDTADTPG 180
Query: 257 WYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKY 436
WYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVVGFG KYPKR HHRGASIPHNGVKY
Sbjct: 181 WYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKY 360
Query: 437 GCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISI 616
GCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNYNYT+PTLAANAGL A LIS+
Sbjct: 361 GCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTKPTLAANAGLGATLISL 540
Query: 617 SDIKTGR 637
+DI T R
Sbjct: 541 ADIDTCR 561
Score = 229 bits (495), Expect(2) = 2e-078
Identities = 100/113 (88%), Positives = 102/113 (90%)
Frame = -2 / -3
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 341 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 162
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWL 79
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWL
Sbjct: 161 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWL 3
Score = 228 bits (492), Expect = 5e-059
Identities = 106/186 (56%), Positives = 132/186 (70%)
Frame = -1 / -2
Query: 634 SGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDVRXXXXXXXXX 455
+ D+ R+Q C Q SI C+SRL V+V+ ADIF AI V S+HCSD+D+R
Sbjct: 558 ASIDVS*RNQCCTQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDIRVCFLRLSPF 379
Query: 454 VTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVE 275
TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L* KLAED CG+E
Sbjct: 378 KTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LCKLAEDICGIE 199
Query: 274 VRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI*AHN 95
+RS +PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE*IE I AH+
Sbjct: 198 IRSTIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE*IEYW*IRAHD 19
Query: 94 IVGLVV 77
IV LVV
Sbjct: 18 IVSLVV 1
Score = 168 bits (362), Expect(2) = 4e-060
Identities = 75/114 (65%), Positives = 88/114 (77%)
Frame = +1 / +3
Query: 79 QPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATSVRCQRSFPCFSIQRLS*SCRHAWV 258
QPN QC+VL+ SIQFIQLH*RRT+TTQPW+AS TSVR Q S PC S+ LS CR+ V
Sbjct: 3 QPN*QCHVLVFTSIQFIQLH*RRTDTTQPWRASTTSVRRQCSIPCLSVC*LSGHCRYTRV 182
Query: 259 VLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCGFRKQVPEAPSSQRRVDTS 420
VL T* L+HR PPQVC+VTA LH QEP +DELR GF K+VP+A SSQR ++ S
Sbjct: 183 VLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRGFWKEVPQACSSQRGINPS 344
Score = 163 bits (350), Expect = 2e-039
Identities = 84/149 (56%), Positives = 96/149 (64%)
Frame = -3 / -1
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 448 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 269
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 268 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 89
Query: 164 G*VVLVLL**S*MN*IEADMST*HCRFGC 78
G*VV VLL**S*MN*I + ST*HC+FGC
Sbjct: 88 G*VVSVLL**S*MN*ILVNTST*HCQFGC 2
Score = 132 bits (282), Expect(2) = 1e-042
Identities = 67/128 (52%), Positives = 77/128 (60%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 155 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 334
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 335 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 514
Query: 591 VWLQR*SL 614
W+Q * L
Sbjct: 515 AWVQH*FL 538
Score = 84.0 bits (177), Expect(2) = 2e-078
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 630 VLISDIEISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
V +S EI+ A RPAFAARVG V*L*FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 554 VSMSAKEINVAPRPAFAARVGFV*L*FVRISLKPSCLSGPATIAPTRILGFAFLDS 387
Score = 83.5 bits (176), Expect(2) = 4e-060
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLY 615
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GC+ D +
Sbjct: 396 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHKAYSCSKCWPGCNIDFF 539
Score = 61.6 bits (128), Expect(2) = 1e-042
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = +3 / +2
Query: 78 TTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
TTK TM CA I YSIHSTSLKED*YNSTMEG
Sbjct: 2 TTKLTMSCARIYQYSIHSTSLKED*YNSTMEG 97
>gb|BU985662.1|BU985662 HF08E02r HF Hordeum vulgare subsp. vulgare cDNA clone HF08E02
5-PRIME, mRNA sequence
Length = 583
Score = 410 bits (889), Expect = e-114
Identities = 159/176 (90%), Positives = 169/176 (96%)
Frame = +2 / +3
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPL
Sbjct: 54 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPL 233
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVV
Sbjct: 234 QYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVV 413
Query: 365 GFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDG 532
GFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG
Sbjct: 414 GFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDG 581
Score = 280 bits (605), Expect(2) = 9e-082
Identities = 122/137 (89%), Positives = 125/137 (91%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 466 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 287
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 286 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 107
Query: 57 S*GYPGLRKSLNLLRRT 7
S*GYPGLRKS NLLRRT
Sbjct: 106 S*GYPGLRKSRNLLRRT 56
Score = 243 bits (526), Expect = 1e-063
Identities = 109/176 (61%), Positives = 131/176 (74%)
Frame = -1 / -3
Query: 532 AITPVGASHHCSDKDVRXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVA 353
AI V S+HCSD+D+R TSFA I D V+R SVM L VL+S+TH+VA
Sbjct: 581 AIMLVRPSNHCSDEDIRVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVA 402
Query: 352 HLQWVLAKDVVEL*PGKLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLR 173
HL WVLA +V++L* KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKWLR
Sbjct: 401 HLLWVLA*NVIKL*LCKLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKWLR 222
Query: 172 PSMVELY*SSFSEVE*IE*RQI*AHNIVGLVVECPQYFFVRVPWT*EESQPAEKNL 5
PSMVELY SSFSEVE*IE I*AH+IV LVVECP YFF+R+PW *EE QPAEKNL
Sbjct: 221 PSMVELYQSSFSEVE*IEYW*I*AHDIVSLVVECP*YFFIRIPWA*EEPQPAEKNL 54
Score = 205 bits (442), Expect = 4e-052
Identities = 102/173 (58%), Positives = 116/173 (67%)
Frame = -3 / -2
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 573 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 394
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 393 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 214
Query: 164 G*VVLVLL**S*MN*IEADMST*HCRFGCGMSSVFLRKGTLDLGRVSTC*EEP 6
G*VV VLL**S*MN*I +MST*HC+FGCGMS +FL K TL LGR +TC*EEP
Sbjct: 213 G*VVSVLL**S*MN*ILVNMST*HCQFGCGMSLIFLHKDTLGLGRAATC*EEP 55
Score = 204 bits (441), Expect(2) = 9e-057
Identities = 93/138 (67%), Positives = 106/138 (76%)
Frame = +1 / +2
Query: 7 GSSQQVETLPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATS 186
GSSQQV LPK RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TS
Sbjct: 56 GSSQQVAALPKPRVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTS 235
Query: 187 VRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCG 366
VR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR G
Sbjct: 236 VRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRG 415
Query: 367 FRKQVPEAPSSQRRVDTS 420
F K+VP+A SSQR ++ S
Sbjct: 416 FWKEVPQACSSQRGINPS 469
Score = 112 bits (239), Expect(2) = 3e-049
Identities = 57/101 (56%), Positives = 63/101 (62%)
Frame = +3 / +1
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 280 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 459
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMA 533
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA
Sbjct: 460 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMA 582
Score = 103 bits (220), Expect(2) = 3e-049
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = +3 / +1
Query: 6 RFFSAG*DSS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
RFFSAG SS* QG L KKY*GHSTTK TM CAHI YSIHSTSLKED*YNSTMEG
Sbjct: 55 RFFSAGCGSS*AQGILMKKY*GHSTTKLTMSCAHIYQYSIHSTSLKED*YNSTMEG 222
Score = 44.6 bits (91), Expect(2) = 9e-082
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 531 PSRLSGPATIAPTRMLGFAFFVS 463
PS LSGPATIAPTR+LGFAF S
Sbjct: 580 PSCLSGPATIAPTRILGFAFLDS 512
Score = 36.3 bits (73), Expect(2) = 9e-057
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 472 EGKP*HPCRSNGGWPRQA*WL 534
E KP*+P RSNG W QA*WL
Sbjct: 521 ESKP*YPRRSNGCWA*QA*WL 583
>gb|AV923747.1|AV923747 AV923747 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1e17 5', mRNA sequence
Length = 507
Score = 395 bits (857), Expect = e-109
Identities = 151/169 (89%), Positives = 162/169 (95%)
Frame = +2 / +1
Query: 29 LFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQYAVNAAF 208
+FLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPLQY VNAAF
Sbjct: 1 VFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPLQYVVNAAF 180
Query: 209 LASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPK 388
LASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVVGFG KYPK
Sbjct: 181 LASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPK 360
Query: 389 RPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGY 535
R HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+
Sbjct: 361 RVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGF 507
Score = 265 bits (574), Expect(2) = 2e-077
Identities = 115/129 (89%), Positives = 118/129 (91%)
Frame = -2 / -2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 389 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 210
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 209 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 30
Query: 57 S*GYPGLRK 31
S*GYPGLRK
Sbjct: 29 S*GYPGLRK 3
Score = 226 bits (488), Expect = 2e-058
Identities = 101/168 (60%), Positives = 124/168 (73%)
Frame = -1 / -1
Query: 532 AITPVGASHHCSDKDVRXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVA 353
AI V S+HCSD+D+R TSFA I D V+R SVM L VL+S+TH+VA
Sbjct: 504 AIMLVRPSNHCSDEDIRVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVA 325
Query: 352 HLQWVLAKDVVEL*PGKLAEDFCGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLR 173
HL WVLA +V++L* KLAED CG+E+RS +PP +CS +I+++ R KE C+D VLKWLR
Sbjct: 324 HLLWVLA*NVIKL*LCKLAEDICGIEIRSTIPPWCICSVQIISIQRGKECCIDDVLKWLR 145
Query: 172 PSMVELY*SSFSEVE*IE*RQI*AHNIVGLVVECPQYFFVRVPWT*EE 29
PSMVELY SSFSEVE*IE I*AH+IV LVVECP YFF+R+PW *E+
Sbjct: 144 PSMVELYQSSFSEVE*IEYW*I*AHDIVSLVVECP*YFFIRIPWA*ED 1
Score = 192 bits (414), Expect(2) = 4e-053
Identities = 87/130 (66%), Positives = 100/130 (76%)
Frame = +1 / +3
Query: 31 LPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATSVRCQRSFP 210
LPK RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TSVR Q S P
Sbjct: 3 LPKPRVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTSVRRQCSIP 182
Query: 211 CFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCGFRKQVPEA 390
C S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR GF K+VP+A
Sbjct: 183 CLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRGFWKEVPQA 362
Query: 391 PSSQRRVDTS 420
SSQR ++ S
Sbjct: 363 CSSQRGINPS 392
Score = 190 bits (409), Expect = 1e-047
Identities = 96/165 (58%), Positives = 109/165 (66%)
Frame = -3 / -3
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 496 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 317
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 316 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 137
Query: 164 G*VVLVLL**S*MN*IEADMST*HCRFGCGMSSVFLRKGTLDLGR 30
G*VV VLL**S*MN*I +MST*HC+FGCGMS +FL K TL LGR
Sbjct: 136 G*VVSVLL**S*MN*ILVNMST*HCQFGCGMSLIFLHKDTLGLGR 2
Score = 112 bits (239), Expect(2) = 1e-045
Identities = 57/101 (56%), Positives = 63/101 (62%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 203 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 382
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMA 533
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA
Sbjct: 383 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMA 505
Score = 91.8 bits (194), Expect(2) = 1e-045
Identities = 41/48 (85%), Positives = 41/48 (85%)
Frame = +3 / +2
Query: 30 SS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
SS* QG L KKY*GHSTTK TM CAHI YSIHSTSLKED*YNSTMEG
Sbjct: 2 SS*AQGILMKKY*GHSTTKLTMSCAHIYQYSIHSTSLKED*YNSTMEG 145
Score = 44.6 bits (91), Expect(2) = 2e-077
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 531 PSRLSGPATIAPTRMLGFAFFVS 463
PS LSGPATIAPTR+LGFAF S
Sbjct: 503 PSCLSGPATIAPTRILGFAFLDS 435
Score = 36.3 bits (73), Expect(2) = 4e-053
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WL 534
E KP*+P RSNG W QA*WL
Sbjct: 444 ESKP*YPRRSNGCWA*QA*WL 506
>gb|AV927273.1|AV927273 AV927273 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1e17 3', mRNA sequence
Length = 684
Score = 340 bits (737), Expect(3) = e-108
Identities = 130/151 (86%), Positives = 144/151 (95%)
Frame = +2 / -3
Query: 221 YSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHH 400
Y+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVVGFG KYPKR HH
Sbjct: 682 YADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVVGFGKKYPKRVHH 503
Query: 401 RGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLA 580
RGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNYNYTEPTLA
Sbjct: 502 RGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLA 323
Query: 581 ANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
ANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 322 ANAGLVAALISLADIDTGRYSIDKNTIFSAV 230
Score = 169 bits (363), Expect(2) = 2e-044
Identities = 77/148 (52%), Positives = 102/148 (68%)
Frame = -1 / +2
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 239 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 418
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PG 305
R TSFA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L*
Sbjct: 419 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LC 598
Query: 304 KLAEDFCGVEVRSAVPPRRVCSFKIVAV 221
KLAED CG+E+RS +PP +CS +I+++
Sbjct: 599 KLAEDICGIEIRSTIPPWCICSVQIISI 682
Score = 133 bits (285), Expect = 2e-030
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / -1
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 672 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 493
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 492 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 313
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 312 AWLQH*FL 289
Score = 132 bits (282), Expect(3) = 4e-066
Identities = 59/66 (89%), Positives = 59/66 (89%)
Frame = -2 / +3
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 486 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 665
Query: 237 SR*SLY 220
SR*S Y
Sbjct: 666 SR*SAY 683
Score = 117 bits (250), Expect(3) = 1e-051
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / -2
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 431 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 252
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 251 EHHLLSSSPNVPDTPTTAVSLETLKNQ 171
Score = 116 bits (248), Expect(3) = 4e-066
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / +3
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 171 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 350
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 351 FVRISLKPSCLSGPATIAPTRILGFAFLDS 440
Score = 95.0 bits (201), Expect(3) = 3e-033
Identities = 49/100 (49%), Positives = 57/100 (57%)
Frame = -3 / +1
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 379 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 558
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSR 225
+AVT QTCGG LW R+*V +TT LQ D++
Sbjct: 559 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQ 678
Score = 88.1 bits (186), Expect(3) = 1e-051
Identities = 40/64 (62%), Positives = 48/64 (75%)
Frame = +1 / -2
Query: 229 LS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCGFRKQVPEAPSSQRR 408
LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR GF K+VP+A SSQR
Sbjct: 674 LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRGFWKEVPQACSSQRG 495
Query: 409 VDTS 420
++ S
Sbjct: 494 INPS 483
Score = 56.1 bits (116), Expect(3) = e-108
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2 / -1
Query: 800 AKARDRKADSISL*SFYFCINMTDQYKILCQT*IGSC 910
+K +KAD+ISL SFYFCI MTD YK CQ GSC
Sbjct: 111 SKDHKQKADNISLQSFYFCIGMTDHYKSXCQPWTGSC 1
Score = 52.4 bits (108), Expect(3) = 3e-033
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 184 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 336
Score = 42.8 bits (87), Expect(3) = 4e-066
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 908 SFRSMSDRGSYTDLSY*YRNRSSINLCCQLS 816
+F+SM D Y D SY YR+R+S++LCC LS
Sbjct: 3 NFQSMVDXMIYNDPSYRYRSRNSVSLCCLLS 95
Score = 37.3 bits (75), Expect(3) = 1e-051
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 817 ES*QHKFIELLFLYQYDRSV*DPLSDIDRKL 909
ES QHK E L LY+YD S+* LS +D KL
Sbjct: 94 ESRQHKLTEFLLLYRYDGSL*IXLSTMDWKL 2
Score = 37.3 bits (75), Expect(3) = e-108
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 255 IRTPSSQQFPQCSRHPHHRRQLGNLEES 172
Score = 33.6 bits (67), Expect(2) = 2e-044
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 910 TASDLCLTEDLILICHIDTEIEAL*TYAVSF 818
T S LT I+I H DTE+E L* Y V F
Sbjct: 1 TTSSPWLTX*FIMIRHTDTEVETL*AYVVCF 93
Score = 33.1 bits (66), Expect(3) = 3e-033
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / +2
Query: 909 QLPIYV*QRILY*SVILIQK*KLYKLM 829
QLP++ *Q L *SVI IQK*KL KLM
Sbjct: 2 QLPVHG*QXDL**SVIPIQK*KLCKLM 82
>gb|BM097444.2|BM097444 EBro05_SQ003_F03_R root, 3 week, reduced light, cv Optic, EBro05
Hordeum vulgare subsp. vulgare cDNA clone
EBro05_SQ003_F03 5', mRNA sequence
Length = 499
Score = 379 bits (822), Expect = e-104
Identities = 147/166 (88%), Positives = 159/166 (95%)
Frame = +2 / +1
Query: 128 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFA 307
FNFTKGGLIQLNHG PQPLQY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA
Sbjct: 1 FNFTKGGLIQLNHGGPQPLQYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFA 180
Query: 308 RSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPN 487
+SQLDYILGKNP KMSYVVGFG KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPN
Sbjct: 181 KSQLDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPN 360
Query: 488 ILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDI 625
ILVGAMVAGPD+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI
Sbjct: 361 ILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADI 498
Score = 215 bits (465), Expect = 3e-055
Identities = 96/166 (57%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 625 DIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDVRXXXXXXXXXVTS 446
D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+R TS
Sbjct: 498 DVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDIRVCFLRLSPFKTS 319
Query: 445 FAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEVRS 266
FA I D V+R SVM L VL+S+TH+VAHL WVLA +V++L* KLAED CG+E+RS
Sbjct: 318 FASIFDTVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LCKLAEDICGIEIRS 139
Query: 265 AVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE 128
+PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE
Sbjct: 138 TIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE 1
Score = 192 bits (414), Expect(2) = 3e-069
Identities = 86/96 (89%), Positives = 86/96 (89%)
Frame = -2 / -3
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 290 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 111
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKL 130
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKL
Sbjct: 110 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKL 3
Score = 140 bits (300), Expect(2) = 5e-052
Identities = 63/97 (64%), Positives = 74/97 (76%)
Frame = +1 / +3
Query: 130 QLH*RRTNTTQPWKASATSVRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQ 309
QLH*RRT+TTQPW+AS TSVR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+
Sbjct: 3 QLH*RRTDTTQPWRASTTSVRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCK 182
Query: 310 VTARLHPWQEPIEDELRCGFRKQVPEAPSSQRRVDTS 420
VTA LH QEP +DELR GF K+VP+A SSQR ++ S
Sbjct: 183 VTA*LHSRQEPTKDELRRGFWKEVPQACSSQRGINPS 293
Score = 134 bits (288), Expect(2) = 4e-032
Identities = 72/132 (54%), Positives = 82/132 (62%)
Frame = -3 / -1
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXX 345
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT F+NP
Sbjct: 397 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGTSFQNPRRSSSF 218
Query: 344 XXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFH 165
+AVT QTCGG LW R+*V +TT LQ D++ E+QG L *+RTEV EA H
Sbjct: 217 VGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALH 38
Query: 164 G*VVLVLL**S* 129
G*VV VLL**S*
Sbjct: 37 G*VVSVLL**S* 2
Score = 133 bits (285), Expect(2) = 3e-035
Identities = 68/128 (53%), Positives = 77/128 (60%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 104 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 283
Query: 411 RYLTTASSMGAKEVTSGGTQRRQTLTSLSEQWWLAPTGVMATKMSAXXXXXXXXXXQRML 590
+ L T S+M AKEV +G + R+QTL S SEQW L T +MA+K+SA Q+ML
Sbjct: 284 QSLITVSNMDAKEVLNGESLRKQTLISSSEQWLLGLTSMMASKISAQITITQSLLLQQML 463
Query: 591 VWLQR*SL 614
WLQ * L
Sbjct: 464 AWLQH*FL 487
Score = 90.4 bits (191), Expect(2) = 3e-069
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / -3
Query: 612 EISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
EI+AATRPAFAARVGSV*L*FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 485 EINAATRPAFAARVGSV*L*FVRISLKPSCLSGPATIAPTRILGFAFLDS 336
Score = 84.9 bits (179), Expect(2) = 5e-052
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLY 615
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D +
Sbjct: 345 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFF 488
Score = 35.9 bits (72), Expect(2) = 3e-035
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / +2
Query: 129 STSLKED*YNSTMEG 173
STSLKED*YNSTMEG
Sbjct: 2 STSLKED*YNSTMEG 46
Score = 24.0 bits (46), Expect(2) = 4e-032
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / -1
Query: 611 RSALQPDQHSLRE*A 567
+S LQP QH L+E*A
Sbjct: 484 KSMLQPGQHLLQE*A 440
>gb|BE603205.3|BE603205 HVSMEh0102H23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102H23f, mRNA sequence
Length = 726
Score = 338 bits (732), Expect = 4e-092
Identities = 134/160 (83%), Positives = 145/160 (90%)
Frame = +2 / +1
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPL
Sbjct: 208 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPL 387
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KM+YVV
Sbjct: 388 QYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMNYVV 567
Query: 365 GFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANP 484
GFG K PKR H+R ASIP+NGVKYGCKGG+ K+ P
Sbjct: 568 GFGKK*PKRVHYRRASIPYNGVKYGCKGGF*MERA*KSKP 687
Score = 273 bits (591), Expect = 1e-072
Identities = 120/137 (87%), Positives = 123/137 (89%)
Frame = -2 / -2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDA L** R GY FPKPTT* IF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 620 GIDALL**TRLGYFFPKPTT*FIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 441
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 440 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 261
Query: 57 S*GYPGLRKSLNLLRRT 7
S*GYPGLRKS NLLRRT
Sbjct: 260 S*GYPGLRKSRNLLRRT 210
Score = 220 bits (475), Expect = 1e-056
Identities = 96/149 (64%), Positives = 116/149 (77%)
Frame = -1 / -1
Query: 451 TSFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEV 272
TSFA I D V+R SVM L +L+S+TH+V HL WVLA +V++L* KLAED CG+E+
Sbjct: 654 TSFASIFDTVIRD*CPSVMNTLGLLLSKTHDVVHLLWVLA*NVIKL*LCKLAEDICGIEI 475
Query: 271 RSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI*AHNI 92
RS +PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE*IE I AH+I
Sbjct: 474 RSTIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE*IEYW*IRAHDI 295
Query: 91 VGLVVECPQYFFVRVPWT*EESQPAEKNL 5
V LVVECP YFF+R+PW *EE QPAEKNL
Sbjct: 294 VSLVVECP*YFFIRIPWA*EEPQPAEKNL 208
Score = 195 bits (420), Expect(2) = 9e-051
Identities = 88/136 (64%), Positives = 103/136 (75%)
Frame = +1 / +3
Query: 7 GSSQQVETLPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATS 186
GSSQQV LPK RV L RN +DIPQPN QC+VL+ SIQFIQLH*RRT+TTQPW+AS TS
Sbjct: 210 GSSQQVAALPKPRVSL*RNIKDIPQPN*QCHVLVFTSIQFIQLH*RRTDTTQPWRASTTS 389
Query: 187 VRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCG 366
VR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR G
Sbjct: 390 VRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRG 569
Query: 367 FRKQVPEAPSSQRRVD 414
F K+V +A S Q+ ++
Sbjct: 570 FWKEVTQACSLQKGIN 617
Score = 171 bits (368), Expect = 6e-042
Identities = 84/149 (56%), Positives = 98/149 (65%)
Frame = -3 / -3
Query: 452 NLLCTHT*RRCEVSTRLCDEGASGTCFRNPXXXXXXXXXXXXXXRAVTWQTCGGLLWCRS 273
NLLC H * R + C+E A T F+NP +AVT QTCGG LW R+
Sbjct: 655 NLLCIHI*HRYKGLMPFCNEHAWVTSFQNPRRSSSFVGSCLECNQAVTLQTCGGHLWYRN 476
Query: 272 *VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFHG*VVLVLL**S*MN*IEADMST*H 93
*V +TT LQ D++ E+QG L *+RTEV EA HG*VV VLL**S*MN*I + ST*H
Sbjct: 475 *VHNTTLVYLQCPDNQHTERQGMLH*RRTEVVEALHG*VVSVLL**S*MN*ILVNTST*H 296
Query: 92 CRFGCGMSSVFLRKGTLDLGRVSTC*EEP 6
C+FGCGMS +FL K TL LGR +TC*EEP
Sbjct: 295 CQFGCGMSLIFLHKDTLGLGRAATC*EEP 209
Score = 100 bits (212), Expect(2) = 4e-038
Identities = 46/56 (82%), Positives = 46/56 (82%)
Frame = +3 / +2
Query: 6 RFFSAG*DSS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
RFFSAG SS* QG L KKY*GHSTTK TM CA I YSIHSTSLKED*YNSTMEG
Sbjct: 209 RFFSAGCGSS*AQGILMKKY*GHSTTKLTMSCARIYQYSIHSTSLKED*YNSTMEG 376
Score = 79.0 bits (166), Expect(2) = 4e-038
Identities = 41/74 (55%), Positives = 43/74 (58%)
Frame = +3 / +2
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R* T WV E S S ITE
Sbjct: 434 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*TTSWVLERSNPSVFITEGH 613
Query: 411 RYLTTASSMGAKEV 452
+ L T S+M AKEV
Sbjct: 614 QSLITVSNMDAKEV 655
Score = 25.8 bits (50), Expect(2) = 9e-051
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 452 YKWRDTKKANPNIL 493
+KWR+ +KANP L
Sbjct: 656 FKWREPRKANPYYL 697
>gb|BJ448471.1|BJ448471 BJ448471 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20b09 5', mRNA sequence
Length = 617
Score = 320 bits (693), Expect = 9e-087
Identities = 126/138 (91%), Positives = 132/138 (95%)
Frame = +2 / +2
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPL
Sbjct: 203 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPL 382
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT+VLRKFA+SQLDYILGKNP KMSYVV
Sbjct: 383 QYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTDVLRKFAKSQLDYILGKNPQKMSYVV 562
Query: 365 GFGNKYPKRPHHRGASIP 418
GFG KYPKR HHRGASIP
Sbjct: 563 GFGKKYPKRVHHRGASIP 616
Score = 280 bits (605), Expect = 1e-074
Identities = 122/137 (89%), Positives = 125/137 (91%)
Frame = -2 / -3
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLRRTSVV*KLGPQYHPGVSA
Sbjct: 615 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRRTSVV*KLGPQYHPGVSAV 436
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+YEH+TLSVWLWNVL+IS
Sbjct: 435 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGKYEHMTLSVWLWNVLNIS 256
Query: 57 S*GYPGLRKSLNLLRRT 7
S*GYPGLRKS NLLRRT
Sbjct: 255 S*GYPGLRKSRNLLRRT 205
Score = 212 bits (458), Expect = 2e-054
Identities = 91/133 (68%), Positives = 109/133 (81%)
Frame = -1 / -2
Query: 403 SVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEVRSAVPPRRVCSFKIVA 224
SVM L VL+S+TH+VAHL WVLA +V++L* KLAED CG+E+RS +PP +CS +I++
Sbjct: 601 SVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LCKLAEDICGIEIRSTIPPWCICSVQIIS 422
Query: 223 V*RSKESCVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI*AHNIVGLVVECPQYFFVRVP 44
+ R KE C+D VLKWLRPSMVELY SSFSEVE*IE I*AH+IV LVVECP YFF+R+P
Sbjct: 421 IQRGKECCIDDVLKWLRPSMVELYQSSFSEVE*IEYW*I*AHDIVSLVVECP*YFFIRIP 242
Query: 43 WT*EESQPAEKNL 5
W *EE QPAEKNL
Sbjct: 241 WA*EEPQPAEKNL 203
Score = 203 bits (438), Expect = 1e-051
Identities = 92/136 (67%), Positives = 105/136 (77%)
Frame = +1 / +1
Query: 7 GSSQQVETLPKSRVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATS 186
GSSQQV LPK RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TS
Sbjct: 205 GSSQQVAALPKPRVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTS 384
Query: 187 VRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCG 366
VR Q S PC S+ LS CR+ VVL T* L+HR PPQVC+VTA LH QEP +DELR G
Sbjct: 385 VRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHRCPPQVCKVTA*LHSRQEPTKDELRRG 564
Query: 367 FRKQVPEAPSSQRRVD 414
F K+VP+A SSQR ++
Sbjct: 565 FWKEVPQACSSQRGIN 612
Score = 170 bits (366), Expect = 1e-041
Identities = 81/133 (60%), Positives = 93/133 (69%)
Frame = -3 / -1
Query: 404 LCDEGASGTCFRNPXXXXXXXXXXXXXXRAVTWQTCGGLLWCRS*VRSTTQACLQLQDSR 225
LCDE A GT F+NP +AVT QTCGG LW R+*V +TT LQ D++
Sbjct: 602 LCDEHAWGTSFQNPRRSSSFVGSCLECNQAVTLQTCGGHLWYRN*VHNTTLVYLQCPDNQ 423
Query: 224 CIEKQGKLR*QRTEVAEAFHG*VVLVLL**S*MN*IEADMST*HCRFGCGMSSVFLRKGT 45
E+QG L *+RTEV EA HG*VV VLL**S*MN*I +MST*HC+FGCGMS +FL K T
Sbjct: 422 HTERQGMLH*RRTEVVEALHG*VVSVLL**S*MN*ILVNMST*HCQFGCGMSLIFLHKDT 243
Query: 44 LDLGRVSTC*EEP 6
L LGR +TC*EEP
Sbjct: 242 LGLGRAATC*EEP 204
Score = 103 bits (220), Expect(2) = 3e-036
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = +3 / +3
Query: 6 RFFSAG*DSS*VQGTLTKKY*GHSTTKPTMLCAHICLYSIHSTSLKED*YNSTMEG 173
RFFSAG SS* QG L KKY*GHSTTK TM CAHI YSIHSTSLKED*YNSTMEG
Sbjct: 204 RFFSAGCGSS*AQGILMKKY*GHSTTKLTMSCAHIYQYSIHSTSLKED*YNSTMEG 371
Score = 68.9 bits (144), Expect(2) = 3e-036
Identities = 36/63 (57%), Positives = 37/63 (58%)
Frame = +3 / +3
Query: 231 ILKLQTRLGGTADLTSTPQKSSASLPGHSSTTSLARTH*R*ATLWVSETSTRSALITEAR 410
I LQ GG DL S PQ SSASL HS T ARTH R*AT WV E ST S ITE
Sbjct: 429 IWTLQIHQGGIVDLISIPQMSSASLQSHSLITF*ARTHKR*ATSWVLERSTPSVFITEGH 608
Query: 411 RYL 419
+ L
Sbjct: 609 QSL 617
>gb|AV920035.1|AV920035 AV920035 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9a10 3', mRNA sequence
Length = 664
Score = 221 bits (478), Expect(4) = 9e-078
Identities = 85/99 (85%), Positives = 95/99 (95%)
Frame = +2 / -1
Query: 377 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNY 556
KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNY
Sbjct: 661 KYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNY 482
Query: 557 NYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
NYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 481 NYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 365
Score = 117 bits (250), Expect(3) = 3e-035
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / -3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 566 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 387
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 386 EHHLLSSSPNVPDTPTTAVSLETLKNQ 306
Score = 116 bits (248), Expect(4) = 3e-040
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / +3
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 306 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 485
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 486 FVRISLKPSCLSGPATIAPTRILGFAFLDS 575
Score = 95.5 bits (202), Expect(3) = 2e-028
Identities = 48/97 (49%), Positives = 60/97 (61%)
Frame = -1 / +2
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 374 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 553
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVLV 374
R TSFA I D V+R SVM L VL+
Sbjct: 554 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVLL 664
Score = 53.3 bits (110), Expect(4) = 1e-025
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = -3 / +1
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGT 378
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT
Sbjct: 514 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGT 660
Score = 52.4 bits (108), Expect(4) = 1e-025
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 319 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 471
Score = 45.1 bits (92), Expect(4) = 9e-078
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 246 SKDHKQKADNISLQSFYFCIGMTDHYK 166
Score = 44.6 bits (91), Expect(4) = 9e-078
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 166 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 35
Score = 44.1 bits (90), Expect(4) = 3e-040
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +2
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 35 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 169
Score = 42.8 bits (87), Expect(3) = 2e-028
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -3 / +1
Query: 1001 KGTISTKKNFTHELECQ*QQDPQKLAPRDAHSFRSMSDR 885
KGTISTK+ L + QQ PQ L + AH+F+SM DR
Sbjct: 46 KGTISTKRTSHVNLGYEEQQGPQNLVSQIAHNFQSMVDR 162
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -2 / +3
Query: 999 RYHFYKKELHT*AGVPIATRPPKISSTRCTQLPIYV*QRI 880
RYHFYKK G+ TR K S T TQLP++ *Q I
Sbjct: 48 RYHFYKKNFTRELGI*RTTRTSKFSFTNRTQLPVHG*QMI 167
Score = 39.1 bits (79), Expect(3) = 3e-035
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -3
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 179 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 45
Score = 37.3 bits (75), Expect(4) = 9e-078
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 390 IRTPSSQQFPQCSRHPHHRRQLGNLEES 307
Score = 35.9 bits (72), Expect(4) = 3e-040
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 168 YNDPSYRYRSRNSVSLCCLLS 230
Score = 30.4 bits (60), Expect(3) = 3e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 229 ESRQHKLTEFLLLYRYDGSL* 167
Score = 29.9 bits (59), Expect(3) = 2e-028
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 877 ILICHIDTEIEAL*TYAVSF 818
I+I H DTE+E L* Y V F
Sbjct: 169 IMIRHTDTEVETL*AYVVCF 228
Score = 25.4 bits (49), Expect(4) = 3e-040
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 417 GIDAPL**GRFGY 379
GIDAPL** R GY
Sbjct: 621 GIDAPL**TRLGY 659
Score = 24.0 bits (46), Expect(4) = 1e-025
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 873 *SVILIQK*KLYKLM 829
*SVI IQK*KL KLM
Sbjct: 173 *SVIPIQK*KLCKLM 217
>gb|AV917955.1|AV917955 AV917955 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17d08 3', mRNA sequence
Length = 663
Score = 221 bits (478), Expect(4) = 9e-078
Identities = 85/99 (85%), Positives = 95/99 (95%)
Frame = +2 / -3
Query: 377 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNY 556
KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNY
Sbjct: 661 KYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNY 482
Query: 557 NYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
NYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 481 NYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 365
Score = 117 bits (250), Expect(3) = 3e-035
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / -2
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 566 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 387
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 386 EHHLLSSSPNVPDTPTTAVSLETLKNQ 306
Score = 116 bits (248), Expect(4) = 3e-040
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / +3
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 306 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 485
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 486 FVRISLKPSCLSGPATIAPTRILGFAFLDS 575
Score = 95.0 bits (201), Expect(3) = 2e-028
Identities = 48/96 (50%), Positives = 59/96 (61%)
Frame = -1 / +2
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 374 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 553
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVL 377
R TSFA I D V+R SVM L VL
Sbjct: 554 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVL 661
Score = 53.3 bits (110), Expect(4) = 1e-025
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = -3 / +1
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGT 378
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT
Sbjct: 514 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGT 660
Score = 52.4 bits (108), Expect(4) = 1e-025
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / +1
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 319 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 471
Score = 45.1 bits (92), Expect(4) = 9e-078
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 246 SKDHKQKADNISLQSFYFCIGMTDHYK 166
Score = 44.6 bits (91), Expect(4) = 9e-078
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 166 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 35
Score = 44.1 bits (90), Expect(4) = 3e-040
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +2
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 35 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 169
Score = 43.2 bits (88), Expect(3) = 2e-028
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -3 / +1
Query: 1013 KTICKGTISTKKNFTHELECQ*QQDPQKLAPRDAHSFRSMSDR 885
K KGTISTK+ L + QQ PQ L + AH+F+SM DR
Sbjct: 34 KMTYKGTISTKRTSHVNLGYEEQQGPQNLVSQIAHNFQSMVDR 162
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -2 / +3
Query: 999 RYHFYKKELHT*AGVPIATRPPKISSTRCTQLPIYV*QRI 880
RYHFYKK G+ TR K S T TQLP++ *Q I
Sbjct: 48 RYHFYKKNFTRELGI*RTTRTSKFSFTNRTQLPVHG*QMI 167
Score = 39.1 bits (79), Expect(3) = 3e-035
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -2
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 179 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 45
Score = 37.3 bits (75), Expect(4) = 9e-078
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 390 IRTPSSQQFPQCSRHPHHRRQLGNLEES 307
Score = 35.9 bits (72), Expect(4) = 3e-040
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 168 YNDPSYRYRSRNSVSLCCLLS 230
Score = 30.4 bits (60), Expect(3) = 3e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 229 ESRQHKLTEFLLLYRYDGSL* 167
Score = 29.9 bits (59), Expect(3) = 2e-028
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 877 ILICHIDTEIEAL*TYAVSF 818
I+I H DTE+E L* Y V F
Sbjct: 169 IMIRHTDTEVETL*AYVVCF 228
Score = 25.4 bits (49), Expect(4) = 3e-040
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 417 GIDAPL**GRFGY 379
GIDAPL** R GY
Sbjct: 621 GIDAPL**TRLGY 659
Score = 24.0 bits (46), Expect(4) = 1e-025
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 873 *SVILIQK*KLYKLM 829
*SVI IQK*KL KLM
Sbjct: 173 *SVIPIQK*KLCKLM 217
>gb|BJ456192.1|BJ456192 BJ456192 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20b09 3', mRNA sequence
Length = 663
Score = 221 bits (478), Expect(4) = 9e-078
Identities = 85/99 (85%), Positives = 95/99 (95%)
Frame = +2 / -2
Query: 377 KYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNY 556
KYPKR HHRGASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNY
Sbjct: 662 KYPKRVHHRGASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNY 483
Query: 557 NYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
NYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 482 NYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 366
Score = 117 bits (250), Expect(3) = 3e-035
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / -1
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 567 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 388
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 387 EHHLLSSSPNVPDTPTTAVSLETLKNQ 307
Score = 116 bits (248), Expect(4) = 3e-040
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / +1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 307 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 486
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 487 FVRISLKPSCLSGPATIAPTRILGFAFLDS 576
Score = 95.0 bits (201), Expect(3) = 2e-028
Identities = 48/96 (50%), Positives = 59/96 (61%)
Frame = -1 / +3
Query: 664 EDGVLIDAEPSGFDIGYRDQRCNQTSIRCESRLRVVVVRADIFVAITPVGASHHCSDKDV 485
EDGVLI+ + D+ R+Q CNQ SI C+SRL V+V+ ADIF AI V S+HCSD+D+
Sbjct: 375 EDGVLIN*ISASIDVS*RNQCCNQASICCKSRLCVIVICADIFEAIMLVRPSNHCSDEDI 554
Query: 484 RXXXXXXXXXVTSFAPILDAVVRYRRASVMRALRVL 377
R TSFA I D V+R SVM L VL
Sbjct: 555 RVCFLRLSPFKTSFASIFDTVMRD*CPSVMNTLGVL 662
Score = 53.3 bits (110), Expect(4) = 1e-025
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = -3 / +2
Query: 524 ACRGQPPLLRQGC*GLPSLCPSTCNLLCTHT*RRCEVSTRLCDEGASGT 378
AC+ Q PLLR+G *GL S S NLLC H * R E LCDE A GT
Sbjct: 515 ACQAQQPLLRRGY*GLLS*TLSI*NLLCIHI*HRYEGLMPLCDEHAWGT 661
Score = 52.4 bits (108), Expect(4) = 1e-025
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3 / +2
Query: 719 VSMLMAAAGALGTSEESQRRWCSYRCRTVRF*YRI*RSALQPDQHSLRE*A 567
VS L A G GT E RRWCSY+ ++ ++ +S LQP QH L+E*A
Sbjct: 320 VSKLTAVVGVSGTLGELLRRWCSYQLNICQYRCQLKKSMLQPGQHLLQE*A 472
Score = 45.1 bits (92), Expect(4) = 9e-078
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 247 SKDHKQKADNISLQSFYFCIGMTDHYK 167
Score = 44.6 bits (91), Expect(4) = 9e-078
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -2
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 167 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 36
Score = 44.1 bits (90), Expect(4) = 3e-040
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +3
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 36 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 170
Score = 43.2 bits (88), Expect(3) = 2e-028
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -3 / +2
Query: 1013 KTICKGTISTKKNFTHELECQ*QQDPQKLAPRDAHSFRSMSDR 885
K KGTISTK+ L + QQ PQ L + AH+F+SM DR
Sbjct: 35 KMTYKGTISTKRTSHVNLGYEEQQGPQNLVSQIAHNFQSMVDR 163
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -2 / +1
Query: 999 RYHFYKKELHT*AGVPIATRPPKISSTRCTQLPIYV*QRI 880
RYHFYKK G+ TR K S T TQLP++ *Q I
Sbjct: 49 RYHFYKKNFTRELGI*RTTRTSKFSFTNRTQLPVHG*QMI 168
Score = 39.1 bits (79), Expect(3) = 3e-035
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -1
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 180 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 46
Score = 37.3 bits (75), Expect(4) = 9e-078
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -3
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 391 IRTPSSQQFPQCSRHPHHRRQLGNLEES 308
Score = 35.9 bits (72), Expect(4) = 3e-040
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 169 YNDPSYRYRSRNSVSLCCLLS 231
Score = 30.4 bits (60), Expect(3) = 3e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 230 ESRQHKLTEFLLLYRYDGSL* 168
Score = 29.9 bits (59), Expect(3) = 2e-028
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 877 ILICHIDTEIEAL*TYAVSF 818
I+I H DTE+E L* Y V F
Sbjct: 170 IMIRHTDTEVETL*AYVVCF 229
Score = 25.4 bits (49), Expect(4) = 3e-040
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 417 GIDAPL**GRFGY 379
GIDAPL** R GY
Sbjct: 622 GIDAPL**TRLGY 660
Score = 24.0 bits (46), Expect(4) = 1e-025
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2 / +3
Query: 873 *SVILIQK*KLYKLM 829
*SVI IQK*KL KLM
Sbjct: 174 *SVIPIQK*KLCKLM 218
>gb|BU979160.1|BU979160 HA15F07r HA Hordeum vulgare subsp. vulgare cDNA clone HA15F07
5-PRIME, mRNA sequence
Length = 443
Score = 289 bits (626), Expect = 2e-077
Identities = 114/137 (83%), Positives = 125/137 (91%)
Frame = +2 / +1
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSPGYPYEE+LRT+HNQT +MCSYLP F SFN TKGGLIQLNHG+PQPL
Sbjct: 31 QVLLSRLRLFLSPGYPYEEMLRTYHNQTSTIMCSYLPDFRSFNRTKGGLIQLNHGQPQPL 210
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVV 364
QY VNAAFLASL+SDYLEAADTPGWYCGP+FY+ EVLR FAR+Q++YILGKNPLKMSYVV
Sbjct: 211 QYVVNAAFLASLFSDYLEAADTPGWYCGPHFYSIEVLRSFARTQMEYILGKNPLKMSYVV 390
Query: 365 GFGNKYPKRPHHRGASI 415
G G YPKR HHRGASI
Sbjct: 391 GHGKHYPKRVHHRGASI 441
Score = 193 bits (415), Expect = 2e-048
Identities = 94/137 (68%), Positives = 102/137 (74%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAP ** R G FP PTT*LIF GFLP+M S LA LRRTS+ *K GPQYHPGVSAA
Sbjct: 443 GIDAPR**TRLG*CFPCPTT*LIFKGFLPKMYSI*VLAKLRRTSME*KWGPQYHPGVSAA 264
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSIS 58
SR*SL REAR AALT Y SG G P +CI PP V L +L GR EH+ + V LW VL+IS
Sbjct: 263 SR*SLNREARNAALTTYWSGCGCP*FNCIKPPFVLLKDLKSGR*EHMMVLV*LWYVLNIS 84
Query: 57 S*GYPGLRKSLNLLRRT 7
S GYPGL+KSLN LRRT
Sbjct: 83 SYGYPGLKKSLNRLRRT 33
Score = 120 bits (257), Expect = 1e-026
Identities = 56/136 (41%), Positives = 87/136 (63%)
Frame = -1 / -3
Query: 412 RRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEVRSAVPPRRVCSFK 233
RR +VM L V++S ++ HLQ + A+DV+ L P K A++ GVE+ +PPR +CS K
Sbjct: 438 RRTTVMNTLGVMLSVPDHITHLQRIFAQDVLHLSPCKTAKNLDGVEMGPTIPPRGICSLK 259
Query: 232 IVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI*AHNIVGLVVECPQYFFV 53
IV RSKE +D +L+ L +++LY ++F V+ + ++ AH+ GL+V CP + F+
Sbjct: 258 IVTEQRSKECSIDYILERLWLPVIQLYQTTFCSVKRSKIWKVRAHDGAGLIVVCP*HLFI 79
Query: 52 RVPWT*EESQPAEKNL 5
+P T EE PA+KNL
Sbjct: 78 WIPRTQEEP*PAQKNL 31
>gb|BQ760319.1|BQ760319 EBpi07_SQ003_L24_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_L24 5', mRNA sequence
Length = 620
Score = 130 bits (279), Expect(3) = 2e-067
Identities = 49/60 (81%), Positives = 54/60 (90%)
Frame = +2 / +1
Query: 239 AADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
AADTPGWYCGP+FY+ EVLR FAR+Q++YILGKNPLKMSYVVG G YPKR HHRGASIP
Sbjct: 1 AADTPGWYCGPHFYSIEVLRSFARTQMEYILGKNPLKMSYVVGHGKHYPKRVHHRGASIP 180
Score = 127 bits (271), Expect(3) = 2e-067
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +2 / +1
Query: 425 GVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAA 604
G+ GCKGG+ WRDTKK NP+I+VGAMVAGPDR DG+KD+R N NYTEPTLA NAGLVAA
Sbjct: 190 GIHPGCKGGWTWRDTKKPNPHIIVGAMVAGPDRHDGFKDIRKNRNYTEPTLAGNAGLVAA 369
Query: 605 LISIS 619
L+++S
Sbjct: 370 LVALS 384
Score = 88.1 bits (186), Expect(3) = 8e-037
Identities = 43/59 (72%), Positives = 45/59 (76%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSA 241
GIDAP ** R G FP PTT*LIF GFLP+M S LA LRRTS+ *K GPQYHPGVSA
Sbjct: 179 GIDAPR**TRLG*CFPCPTT*LIFKGFLPKMYSI*VLAKLRRTSME*KWGPQYHPGVSA 3
Score = 68.4 bits (143), Expect(3) = 8e-037
Identities = 35/52 (67%), Positives = 36/52 (69%)
Frame = -2 / -1
Query: 618 DIEISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
D +AATRPA ARVGSV*L F R SL PS SGPATIAPT M G F VS
Sbjct: 383 DKATNAATRPALPARVGSV*LRFFRMSLNPSWRSGPATIAPTMM*GLGFLVS 228
Score = 62.9 bits (131), Expect(3) = 7e-024
Identities = 25/53 (47%), Positives = 30/53 (56%)
Frame = +1 / +3
Query: 460 EGHKEGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYI 618
EGH+E +P H C S GGWP * +QR P E QLH +CWS C +I
Sbjct: 225 EGHQEAQPSHHCWSYGGWP*SP*RVQRHPKEPQLHRTNPSGQCWSSCCVGSFI 383
Score = 49.2 bits (101), Expect(3) = 7e-024
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1 / +3
Query: 241 CRHAWVVLRT*LLHHRSPPQVCQVTARLHPWQEPIEDELRCGFRKQVPEAPSSQRRVD 414
CR+ WVVL L HR Q C+ + +H Q+ EDEL RK +P+A SS VD
Sbjct: 3 CRYPWVVLWAPFLLHRGSSQFCKDSDGVHLGQKSFEDELCGRARKALPQACSSPWCVD 176
Score = 37.7 bits (76), Expect(3) = 2e-067
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1 / +3
Query: 652 EHHLLCDSSDVPNAPAAAISMETI 723
EHH+LC +++VP APAA+ +ME I
Sbjct: 408 EHHVLCCAANVPFAPAASSTMEAI 479
Score = 36.3 bits (73), Expect(3) = 7e-024
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 651 RTPSSLRFLRCSQRPRRRHQHGNH 722
RTP SL +CS RPRR HG+H
Sbjct: 407 RTPCSLLCRQCSLRPRRLQHHGSH 478
Score = 35.9 bits (72), Expect(3) = 8e-037
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3 / -2
Query: 722 MVSMLMAAAGALGTSEESQRRWCS 651
M SM++ AAGA GT QR WCS
Sbjct: 478 MASMVLEAAGAKGTLAAQQRTWCS 407
>gb|BI956352.1|BI956352 HVSMEn0002L24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0002L24f, mRNA sequence
Length = 831
Score = 244 bits (527), Expect = 7e-064
Identities = 95/116 (81%), Positives = 100/116 (86%)
Frame = +2 / +1
Query: 137 TKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQ 316
TKGGLIQLNHG PQPLQY VNAAFLASLY+DYL+ ADTPGWYCGPNFYTT LRKFA+SQ
Sbjct: 19 TKGGLIQLNHGGPQPLQYVVNAAFLASLYADYLDTADTPGWYCGPNFYTTGGLRKFAKSQ 198
Query: 317 LDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANP 484
LDYILGKNP KMSYVVGFG KYPKR HHRGASIPHNG KYGCKGG+ W + P
Sbjct: 199 LDYILGKNPQKMSYVVGFGKKYPKRVHHRGASIPHNGGKYGCKGGFGWERGCQCTP 366
Score = 180 bits (388), Expect = 1e-044
Identities = 81/94 (86%), Positives = 81/94 (86%)
Frame = -2 / -2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
GIDAPL** R GY FPKPTT*LIF GFLPRM*SSCD ANLR VV*KLGPQYHPGVSA
Sbjct: 299 GIDAPL**TRLGYFFPKPTT*LIFCGFLPRM*SSCDFANLRSPPVV*KLGPQYHPGVSAV 120
Query: 237 SR*SLYREARKAALTAY*SG*GLPWLSCISPPLV 136
SR*S YREAR AALT Y*SG*G PWLSCISPPLV
Sbjct: 119 SR*SAYREARNAALTTY*SG*GPPWLSCISPPLV 18
Score = 135 bits (289), Expect = 5e-031
Identities = 61/104 (58%), Positives = 77/104 (74%)
Frame = -1 / -1
Query: 448 SFAPILDAVVRYRRASVMRALRVLVSETHNVAHLQWVLAKDVVEL*PGKLAEDFCGVEVR 269
SFA I V+R SVM L VL+S+TH+VAHL WVLA +V++L* KLAE G+E+R
Sbjct: 330 SFASIFATVMRD*CPSVMNTLGVLLSKTHDVAHLLWVLA*NVIKL*LCKLAEPTRGIEIR 151
Query: 268 SAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFS 137
S +PP +CS +I+++ R KE C+D VLKWLRPSMVELY SSFS
Sbjct: 150 STIPPWCICSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFS 19
Score = 124 bits (266), Expect = 7e-028
Identities = 58/94 (61%), Positives = 69/94 (73%)
Frame = +1 / +3
Query: 139 *RRTNTTQPWKASATSVRCQRSFPCFSIQRLS*SCRHAWVVLRT*LLHHRSPPQVCQVTA 318
*RRT+TTQPW+AS TSVR Q S PC S+ LS CR+ VVL T* L+H PQVC+VTA
Sbjct: 21 *RRTDTTQPWRASTTSVRRQCSIPCLSVC*LSGHCRYTRVVLWT*FLYHGWAPQVCKVTA 200
Query: 319 RLHPWQEPIEDELRCGFRKQVPEAPSSQRRVDTS 420
LH QEP +DELR GF K+VP+A SSQR ++ S
Sbjct: 201 *LHSRQEPTKDELRRGFWKEVPQACSSQRGINPS 302
>gb|BQ768653.1|BQ768653 EBro08_SQ012_F07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_F07 5', mRNA sequence
Length = 408
Score = 240 bits (519), Expect = 9e-063
Identities = 89/135 (65%), Positives = 110/135 (81%)
Frame = +2 / +3
Query: 218 LYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPH 397
LY+DY+E+ + PGWYCGPNF T + LR FA+SQL+YILG NP+KMSYVVG+G KYPKR H
Sbjct: 3 LYADYMESVNVPGWYCGPNFMTVDDLRSFAKSQLNYILGDNPMKMSYVVGYGKKYPKRLH 182
Query: 398 HRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTL 577
HRGAS P NG+KY C GG KWRD+KKA+P++L GAMV GPD+ D +KD R +Y EPTL
Sbjct: 183 HRGASTPKNGIKYSCTGGNKWRDSKKADPHVLTGAMVGGPDKNDKFKDARISYAQNEPTL 362
Query: 578 AANAGLVAALISISD 622
NAGLVAAL++I++
Sbjct: 363 VGNAGLVAALVAITN 407
Score = 81.3 bits (171), Expect(2) = 2e-021
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -2 / -3
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAA 238
G+DAP RFGY P PTT*LIF G PRM* S DLA RR+S V KLGPQY PG
Sbjct: 202 GVDAPRWCSRFGYFLPYPTT*LIFIGLSPRM*FS*DLAKERRSSTVMKLGPQYQPGTLTD 23
Query: 237 SR*S 226
S *S
Sbjct: 22 SM*S 11
Score = 41.4 bits (84), Expect(2) = 2e-021
Identities = 24/48 (50%), Positives = 26/48 (54%)
Frame = -2 / -3
Query: 606 SAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
SAAT PA VGS * + SL S LSGP T+AP G AF S
Sbjct: 391 SAATSPALPTSVGSFCA*LILASLNLSFLSGPPTMAPVST*GSAFLES 248
>gb|BQ764603.1|BQ764603 EBca01_SQ004_I10_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_I10 5', mRNA sequence
Length = 512
Score = 197 bits (424), Expect(3) = 1e-062
Identities = 76/89 (85%), Positives = 86/89 (96%)
Frame = +2 / +1
Query: 407 ASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAAN 586
ASIPHNGVKYGCKGG+KWR++KKANPNILVGAMVAGPD+ DG+KD+RTNYNYTEPTLAAN
Sbjct: 1 ASIPHNGVKYGCKGGFKWRESKKANPNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAAN 180
Query: 587 AGLVAALISISDIKTGRFGIDKNTIFSAI 673
AGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 181 AGLVAALISLADIDTGRYSIDKNTIFSAV 267
Score = 117 bits (250), Expect(2) = 7e-029
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +1 / +3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *
Sbjct: 66 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN** 245
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 246 EHHLLSSSPNVPDTPTTAVSLETLKNQ 326
Score = 116 bits (248), Expect(2) = 3e-030
Identities = 60/90 (66%), Positives = 64/90 (71%)
Frame = -2 / -1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 326 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 147
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+LGFAF S
Sbjct: 146 FVRISLKPSCLSGPATIAPTRILGFAFLDS 57
Score = 45.1 bits (92), Expect(3) = 1e-062
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / +2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 386 SKDHKQKADNISLQSFYFCIGMTDHYK 466
Score = 37.3 bits (75), Expect(3) = 1e-062
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 242 IRTPSSQQFPQCSRHPHHRRQLGNLEES 325
Score = 35.9 bits (72), Expect(2) = 3e-030
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 464 YNDPSYRYRSRNSVSLCCLLS 402
Score = 30.4 bits (60), Expect(2) = 7e-029
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 403 ESRQHKLTEFLLLYRYDGSL* 465
>gb|AV912096.1|AV912096 AV912096 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2l16 3', mRNA sequence
Length = 569
Score = 166 bits (357), Expect(4) = 9e-062
Identities = 65/81 (80%), Positives = 75/81 (92%)
Frame = +2 / -1
Query: 431 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 610
KYG KGG+KWR++KKAN NILVGAMVAGPD+ DG+KD+RTNYNYTEPTLAANAGLV ALI
Sbjct: 512 KYGXKGGFKWRESKKANXNILVGAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVXALI 333
Query: 611 SISDIKTGRFGIDKNTIFSAI 673
S++DI TGR+ IDKNTIFSA+
Sbjct: 332 SLADIDTGRYSIDKNTIFSAV 270
Score = 112 bits (239), Expect(2) = 4e-028
Identities = 47/87 (54%), Positives = 61/87 (70%)
Frame = +1 / -3
Query: 472 EGKP*HPCRSNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR* 651
E KP*+P RSNG W QA*WLQR PH+LQLH AYS S+CW G S D + ++ + + *
Sbjct: 471 ESKP*YPRRSNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGXSIDFFS*HRYWQIFN** 292
Query: 652 EHHLLCDSSDVPNAPAAAISMETIERQ 732
EHHLL S +VP+ P A+S+ET++ Q
Sbjct: 291 EHHLLSSSPNVPDTPTXAVSLETLKNQ 211
Score = 111 bits (237), Expect(3) = 3e-030
Identities = 58/90 (64%), Positives = 62/90 (68%)
Frame = -2 / +1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+A TRPAFAARVGSV*L*
Sbjct: 211 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAXTRPAFAARVGSV*L* 390
Query: 552 FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
FVR SL PS LSGPATIAPTR+L FAF S
Sbjct: 391 FVRISLKPSCLSGPATIAPTRILXFAFLDS 480
Score = 46.0 bits (94), Expect(4) = 9e-062
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2 / -3
Query: 800 AKARDRKADSISL*SFYFCINMTDQYKILCQT*IGSCVHRVELIF 934
+K +KA +ISL SF FCI MTD YK + SCV V+L F
Sbjct: 150 SKDHKQKAXNISLQSFXFCIGMTDHYKSSVNHGLASCVRFVKLNF 16
Score = 45.5 bits (93), Expect(4) = 9e-062
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / -3
Query: 377 KYPKRPHHRGASIPHNG 427
KYPKR HHRGASIPHNG
Sbjct: 567 KYPKRVHHRGASIPHNG 517
Score = 36.8 bits (74), Expect(4) = 9e-062
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 295 IRTPSSQQFPQCSRHPHXRRQLGNLEES 212
Score = 33.6 bits (67), Expect(3) = 3e-030
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -3 / +3
Query: 938 PQKLAPRDAHSFRSMSDRGSYTDLSY*YRNRSSINLCCQLS 816
PQ L + AH+ + Y D SY YR+ +S++LC LS
Sbjct: 12 PQNLVSQIAHNLPVHG*QMIYNDPSYRYRSXNSVSLCXLLS 134
Score = 32.7 bits (65), Expect(2) = 4e-028
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1 / -2
Query: 817 ES*QHKFIELLFLYQYDRSV*DPLSDIDRKLCASRGANFWGS 942
ES QHK E LY+YD S+* KLCA F G+
Sbjct: 133 ESXQHKLTEFXLLYRYDGSL*IICQPWTGKLCAICETKF*GT 8
Score = 25.4 bits (49), Expect(3) = 3e-030
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 417 GIDAPL**GRFGY 379
GIDAPL** R GY
Sbjct: 527 GIDAPL**TRLGY 565
>gb|BI949643.1|BI949643 HVSMEl0015A22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0015A22f, mRNA sequence
Length = 902
Score = 227 bits (490), Expect(2) = 5e-061
Identities = 92/117 (78%), Positives = 101/117 (86%)
Frame = +2 / +3
Query: 5 EVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPL 184
+VLLSRLRLFLSP YPYEE+LRT+HNQT +MCSYLP F SFN TKGGLIQLNHG+PQPL
Sbjct: 414 QVLLSRLRLFLSPXYPYEEMLRTYHNQTSTIMCSYLPDFRSFNRTKGGLIQLNHGQPQPL 593
Query: 185 QYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMS 355
QY VNAAFLASL+SDYLEAADTP WYCGP EVL FAR+ ++YILGKNPLKMS
Sbjct: 594 QYVVNAAFLASLFSDYLEAADTPWWYCGPISTPIEVLPSFARTHMEYILGKNPLKMS 764
Score = 154 bits (330), Expect = 1e-036
Identities = 75/116 (64%), Positives = 84/116 (72%)
Frame = -2 / -2
Query: 354 LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAASR*SLYREARKAALTAY*SG* 175
LIF GFLPRM S LA L RTS+ ++GPQYH GVSAASR*SL REAR AALT Y SG
Sbjct: 763 LIFKGFLPRMYSM*VLAKLGRTSMGVEMGPQYHQGVSAASR*SLNREARNAALTTYWSGC 584
Query: 174 GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSISS*GYPGLRKSLNLLRRT 7
G P +CI PP V L +L GR EH+ + V LW VL+ISS GY GL+KSLN LRRT
Sbjct: 583 GCP*FNCIKPPFVLLKDLKSGR*EHMMVLV*LWYVLNISSYGYXGLKKSLNRLRRT 416
Score = 28.1 bits (55), Expect(2) = 5e-061
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 383 PKRPHHRGASIPHNGV 430
PKR HH GASIP V
Sbjct: 790 PKRVHHPGASIPKKKV 837
>gb|BU994975.1|BU994975 HM08M21r HM Hordeum vulgare subsp. vulgare cDNA clone HM08M21
5-PRIME, mRNA sequence
Length = 537
Score = 232 bits (500), Expect(2) = 9e-061
Identities = 87/135 (64%), Positives = 107/135 (79%)
Frame = +2 / +2
Query: 233 LEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGAS 412
+E+ + PGWYCGPNF T + LR FA+SQL+YILG NP+KMSYVVG+G KYPKR HHRGAS
Sbjct: 68 MESVNVPGWYCGPNFMTVDDLRSFAKSQLNYILGDNPMKMSYVVGYGKKYPKRLHHRGAS 247
Query: 413 IPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAG 592
P NG+KY C GG KWRD+KKA+P++L GAMV GPD+ D +KD R +Y EPTL NAG
Sbjct: 248 TPKNGIKYSCTGGNKWRDSKKADPHVLTGAMVGGPDKNDKFKDARISYAQNEPTLVGNAG 427
Query: 593 LVAALISISDIKTGR 637
LVAAL++I++ GR
Sbjct: 428 LVAALVAITNSGRGR 472
Score = 79.4 bits (167), Expect(2) = 4e-021
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = -2 / -1
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPG 250
G+DAP RFGY P PTT*LIF G PRM* S DLA RR+S V KLGPQY PG
Sbjct: 252 GVDAPRWCSRFGYFLPYPTT*LIFIGLSPRM*FS*DLAKERRSSTVMKLGPQYQPG 85
Score = 42.3 bits (86), Expect(2) = 4e-021
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = -2 / -1
Query: 636 RPVLISDIEISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
RP + + SAAT PA VGS * + SL S LSGP T+AP G AF S
Sbjct: 471 RPRPLLVMATSAATSPALPTSVGSFCA*LILASLNLSFLSGPPTMAPVST*GSAFLES 298
Score = 22.6 bits (43), Expect(2) = 9e-061
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 644 IDKNTIFSAI 673
+DKNT+FSA+
Sbjct: 485 VDKNTMFSAV 514
>gb|BQ765008.1|BQ765008 EBca01_SQ005_D16_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_D16 5', mRNA sequence
Length = 685
Score = 226 bits (488), Expect = 2e-058
Identities = 87/128 (67%), Positives = 104/128 (81%)
Frame = +2 / +2
Query: 8 VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQ 187
+LLSRLR+FL+PGYPYEE L +HN T MC Y P FN+FNFTKGGL Q NHG+ Q LQ
Sbjct: 302 LLLSRLRMFLNPGYPYEESLMGYHNVTSMNMCMYFPKFNAFNFTKGGLAQFNHGQGQALQ 481
Query: 188 YAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVG 367
YAV +FLA+LY+DY+E+ + PGWYCGPNF T + LR FA+SQL+YILG NP+KMSYVVG
Sbjct: 482 YAVANSFLAALYADYMESVNVPGWYCGPNFMTVDDLRSFAKSQLNYILGDNPMKMSYVVG 661
Query: 368 FGNKYPKR 391
+G KYPKR
Sbjct: 662 YGKKYPKR 685
Score = 142 bits (304), Expect = 4e-033
Identities = 71/119 (59%), Positives = 77/119 (64%)
Frame = -2 / -2
Query: 390 RFGYLFPKPTT*LIFNGFLPRM*SSCDLANLRRTSVV*KLGPQYHPGVSAASR*SLYREA 211
RFGY P PTT*LIF G PRM* S DLA RR+S V KLGPQY PG S *S A
Sbjct: 684 RFGYFLPYPTT*LIFIGLSPRM*FS*DLAKERRSSTVMKLGPQYQPGTLTDSM*SA*SAA 505
Query: 210 RKAALTAY*SG*GLPWLSCISPPLVKLNELNRGRYEHITLSVWLWNVLSISS*GYPGLR 34
RK TAY S PWL+ SPPLVKLN LN G+Y H+ + V LW +S SS*G PGLR
Sbjct: 504 RKELATAYCSAWPWPWLNWASPPLVKLNALNLGKYMHMFMLVTLWYPMSDSS*G*PGLR 328
>gb|CB875548.1|CB875548 HX08K06w HX Hordeum vulgare subsp. vulgare cDNA clone HX08K06
3-PRIME, mRNA sequence
Length = 620
Score = 127 bits (271), Expect(3) = 3e-053
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = +2 / -3
Query: 425 GVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAA 604
G+ GCKGG+ WRDTKK NP+I+VGAMVAGPDR DG+KD+R N NYTEPTLA NAGLVAA
Sbjct: 489 GIHPGCKGGWTWRDTKKPNPHIIVGAMVAGPDRHDGFKDIRKNRNYTEPTLAGNAGLVAA 310
Query: 605 LISIS 619
L+++S
Sbjct: 309 LVALS 295
Score = 83.1 bits (175), Expect(3) = 3e-053
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2 / -3
Query: 302 FARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
FAR+Q++YILGKNPLKMSYVVG G YPKR HHRGASIP
Sbjct: 615 FARTQMEYILGKNPLKMSYVVGHGKHYPKRVHHRGASIP 499
Score = 68.4 bits (143), Expect(3) = 5e-026
Identities = 35/52 (67%), Positives = 36/52 (69%)
Frame = -2 / +2
Query: 618 DIEISAATRPAFAARVGSV*L*FVRTSL*PSRLSGPATIAPTRMLGFAFFVS 463
D +AATRPA ARVGSV*L F R SL PS SGPATIAPT M G F VS
Sbjct: 296 DKATNAATRPALPARVGSV*LRFFRMSLNPSWRSGPATIAPTMM*GLGFLVS 451
Score = 51.5 bits (106), Expect(3) = 5e-026
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = -2 / +2
Query: 417 GIDAPL**GRFGYLFPKPTT*LIFNGFLPRM*SSCDLANL 298
GIDAP ** R G FP PTT*LIF GFLP+M S LA L
Sbjct: 500 GIDAPR**TRLG*CFPCPTT*LIFKGFLPKMYSI*VLAKL 619
Score = 37.7 bits (76), Expect(3) = 3e-053
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1 / -2
Query: 652 EHHLLCDSSDVPNAPAAAISMETI 723
EHH+LC +++VP APAA+ +ME I
Sbjct: 271 EHHVLCCAANVPFAPAASSTMEAI 200
Score = 35.9 bits (72), Expect(3) = 5e-026
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3 / +3
Query: 722 MVSMLMAAAGALGTSEESQRRWCS 651
M SM++ AAGA GT QR WCS
Sbjct: 201 MASMVLEAAGAKGTLAAQQRTWCS 272
>gb|AV909996.1|AV909996 AV909996 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2l16 5', mRNA sequence
Length = 253
Score = 201 bits (434), Expect = 5e-051
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +2 / +1
Query: 38 SPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLAS 217
SPGYPYEEILRTFHNQTDNVMCSYLP+FNSFNFTKGGLIQLNHG PQPLQY VNAAFLAS
Sbjct: 1 SPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGGPQPLQYVVNAAFLAS 180
Query: 218 LYSDYLEAADTPGWYCGPNFYTTE 289
LY+DYL+ A TPGWYCGPNFYTT+
Sbjct: 181 LYADYLDTAXTPGWYCGPNFYTTD 252
Score = 174 bits (374), Expect = 9e-043
Identities = 73/83 (87%), Positives = 76/83 (91%)
Frame = -2 / -3
Query: 288 SVV*KLGPQYHPGVSAASR*SLYREARKAALTAY*SG*GLPWLSCISPPLVKLNELNRGR 109
SVV*KLGPQYHPGV A SR*S YREAR AALT Y*SG*G PWLSCISPPLVKLNELN G+
Sbjct: 251 SVV*KLGPQYHPGVXAVSR*SAYREARNAALTTY*SG*GPPWLSCISPPLVKLNELNTGK 72
Query: 108 YEHITLSVWLWNVLSISS*GYPG 40
YEH+TLSVWLWNVL+ISS*GYPG
Sbjct: 71 YEHMTLSVWLWNVLNISS*GYPG 3
Score = 138 bits (296), Expect = 5e-032
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = -1 / -2
Query: 286 CGVEVRSAVPPRRVCSFKIVAV*RSKESCVDSVLKWLRPSMVELY*SSFSEVE*IE*RQI 107
CG+E+RS +PP CS +I+++ R KE C+D VLKWLRPSMVELY SSFSEVE*IE I
Sbjct: 249 CGIEIRSTIPPWCXCSVQIISIQRGKECCIDDVLKWLRPSMVELYQSSFSEVE*IEYW*I 70
Query: 106 *AHNIVGLVVECPQYFFVRVPW 41
*AH+IV LVVECP YFF+R+PW
Sbjct: 69 *AHDIVSLVVECP*YFFIRIPW 4
Score = 120 bits (257), Expect = 1e-026
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = +1 / +3
Query: 43 RVPLRRNTEDIPQPNRQCYVLISASIQFIQLH*RRTNTTQPWKASATSVRCQRSFPCFSI 222
RV L RN +DIPQPN QC+VLI SIQFIQLH*RRT+TTQPW+AS TSVR Q S PC S+
Sbjct: 6 RVSL*RNIKDIPQPN*QCHVLIFTSIQFIQLH*RRTDTTQPWRASTTSVRRQCSIPCLSV 185
Query: 223 QRLS*SCRHAWVVLRT*LLHHR 288
LS C + VVL T* L+HR
Sbjct: 186 C*LSGHCXYTRVVLWT*FLYHR 251
Score = 110 bits (235), Expect = 1e-023
Identities = 53/82 (64%), Positives = 62/82 (75%)
Frame = -3 / -1
Query: 287 LWCRS*VRSTTQACLQLQDSRCIEKQGKLR*QRTEVAEAFHG*VVLVLL**S*MN*IEAD 108
LW R+*V +TT Q D++ E+QG L *+RTEV EA HG*VV VLL**S*MN*I +
Sbjct: 250 LWYRN*VHNTTLVYXQCPDNQHTERQGMLH*RRTEVVEALHG*VVSVLL**S*MN*ILVN 71
Query: 107 MST*HCRFGCGMSSVFLRKGTL 42
MST*HC+FGCGMS +FL K TL
Sbjct: 70 MST*HCQFGCGMSLIFLHKDTL 5
>gb|AV930114.1|AV930114 AV930114 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17p12 3', mRNA sequence
Length = 539
Score = 124 bits (265), Expect(4) = 6e-049
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +2 / -1
Query: 497 GAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
GAMVAGPD+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 539 GAMVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 363
Score = 104 bits (221), Expect(3) = 3e-031
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1 / -3
Query: 499 SNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR*EHHLLCDSS 678
SNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *EHHLL S
Sbjct: 537 SNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN**EHHLLSSSP 358
Query: 679 DVPNAPAAAISMETIERQ 732
+VP+ P A+S+ET++ Q
Sbjct: 357 NVPDTPTTAVSLETLKNQ 304
Score = 95.9 bits (203), Expect(3) = 6e-032
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = -2 / +1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 304 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 483
Query: 552 FVRTSL*PSRLSGPATIA 499
FVR SL PS LSGPATIA
Sbjct: 484 FVRISLKPSCLSGPATIA 537
Score = 45.1 bits (92), Expect(4) = 6e-049
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 244 SKDHKQKADNISLQSFYFCIGMTDHYK 164
Score = 44.6 bits (91), Expect(4) = 6e-049
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 164 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 33
Score = 44.1 bits (90), Expect(3) = 6e-032
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +3
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 33 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 167
Score = 39.1 bits (79), Expect(3) = 3e-031
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -3
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 177 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 43
Score = 37.3 bits (75), Expect(4) = 6e-049
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 388 IRTPSSQQFPQCSRHPHHRRQLGNLEES 305
Score = 35.9 bits (72), Expect(3) = 6e-032
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 166 YNDPSYRYRSRNSVSLCCLLS 228
Score = 30.4 bits (60), Expect(3) = 3e-031
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 227 ESRQHKLTEFLLLYRYDGSL* 165
>gb|AV930104.1|AV930104 AV930104 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17o24 3', mRNA sequence
Length = 540
Score = 120 bits (256), Expect(4) = 1e-047
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +2 / -1
Query: 497 GAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
GAMVAG D+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 540 GAMVAGXDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 364
Score = 104 bits (221), Expect(3) = 3e-031
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1 / -3
Query: 499 SNGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR*EHHLLCDSS 678
SNG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *EHHLL S
Sbjct: 538 SNGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN**EHHLLSSSP 359
Query: 679 DVPNAPAAAISMETIERQ 732
+VP+ P A+S+ET++ Q
Sbjct: 358 NVPDTPTTAVSLETLKNQ 305
Score = 92.7 bits (196), Expect(3) = 5e-031
Identities = 50/78 (64%), Positives = 53/78 (67%)
Frame = -2 / +2
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 305 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 484
Query: 552 FVRTSL*PSRLSGPATIA 499
FVR SL PS LS PATIA
Sbjct: 485 FVRISLKPSCLSXPATIA 538
Score = 45.1 bits (92), Expect(4) = 1e-047
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 245 SKDHKQKADNISLQSFYFCIGMTDHYK 165
Score = 44.6 bits (91), Expect(4) = 1e-047
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 165 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 34
Score = 44.1 bits (90), Expect(3) = 5e-031
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +1
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 34 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 168
Score = 39.1 bits (79), Expect(3) = 3e-031
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -3
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 178 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 44
Score = 37.3 bits (75), Expect(4) = 1e-047
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 389 IRTPSSQQFPQCSRHPHHRRQLGNLEES 306
Score = 35.9 bits (72), Expect(3) = 5e-031
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 167 YNDPSYRYRSRNSVSLCCLLS 229
Score = 30.4 bits (60), Expect(3) = 3e-031
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 228 ESRQHKLTEFLLLYRYDGSL* 166
>gb|AV930113.1|AV930113 AV930113 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17p11 3', mRNA sequence
Length = 522
Score = 119 bits (255), Expect(4) = 1e-047
Identities = 47/57 (82%), Positives = 54/57 (94%)
Frame = +2 / -2
Query: 503 MVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNTIFSAI 673
MVAGPD+ DG+KD+RTNYNYTEPTLAANAGLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 521 MVAGPDKHDGFKDIRTNYNYTEPTLAANAGLVAALISLADIDTGRYSIDKNTIFSAV 351
Score = 102 bits (217), Expect(3) = 1e-030
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +1 / -1
Query: 502 NGGWPRQA*WLQRCPHELQLHGAYSRSECWSGCSADLYIRYQNRTVRHR*EHHLLCDSSD 681
NG W QA*WLQR PH+LQLH AYS S+CW GCS D + ++ + + *EHHLL S +
Sbjct: 522 NGCWA*QA*WLQRYPHKLQLHRAYSCSKCWPGCSIDFFS*HRYWQIFN**EHHLLSSSPN 343
Query: 682 VPNAPAAAISMETIERQ 732
VP+ P A+S+ET++ Q
Sbjct: 342 VPDTPTTAVSLETLKNQ 292
Score = 94.1 bits (199), Expect(3) = 2e-031
Identities = 50/77 (64%), Positives = 53/77 (68%)
Frame = -2 / +1
Query: 732 LPLYGFHADXXXXXXXXXXXIAEKMVFLSMPNRPVLISDIEISAATRPAFAARVGSV*L* 553
L L GF AD AEKMVFLS+ PV +S EI+AATRPAFAARVGSV*L*
Sbjct: 292 LILQGFQADGGGGGVGNIGGTAEKMVFLSIEYLPVSMSAKEINAATRPAFAARVGSV*L* 471
Query: 552 FVRTSL*PSRLSGPATI 502
FVR SL PS LSGPATI
Sbjct: 472 FVRISLKPSCLSGPATI 522
Score = 45.1 bits (92), Expect(4) = 1e-047
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 232 SKDHKQKADNISLQSFYFCIGMTDHYK 152
Score = 44.6 bits (91), Expect(4) = 1e-047
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -2
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 152 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 21
Score = 44.1 bits (90), Expect(3) = 2e-031
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +3
Query: 1012 KQFVKVPFLQKRTSHMSWSANSNKTPKN*LHAMHTASDLCLTEDL 878
K KVPFLQK +W +NK K * H HT S LT+DL
Sbjct: 21 K*LTKVPFLQKELHT*TWDMKNNKDLKI*FHKSHTTSSPWLTDDL 155
Score = 39.1 bits (79), Expect(3) = 1e-030
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -1
Query: 868 RSV*DPLSDIDRKLCASRGANFWGSCCYWHSSSCVKFFFVEMVPL 1002
R + + LS +D KLCA F G CC + + FVEMVPL
Sbjct: 165 RIIINHLSTMDWKLCAICETKF*GPCCSSYPKFTCEVLFVEMVPL 31
Score = 37.3 bits (75), Expect(4) = 1e-047
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -3
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 376 IRTPSSQQFPQCSRHPHHRRQLGNLEES 293
Score = 35.9 bits (72), Expect(3) = 2e-031
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 878 YTDLSY*YRNRSSINLCCQLS 816
Y D SY YR+R+S++LCC LS
Sbjct: 154 YNDPSYRYRSRNSVSLCCLLS 216
Score = 30.4 bits (60), Expect(3) = 1e-030
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 817 ES*QHKFIELLFLYQYDRSV* 879
ES QHK E L LY+YD S+*
Sbjct: 215 ESRQHKLTEFLLLYRYDGSL* 153
>gb|BU967340.1|BU967340 HB03P20r BC Hordeum vulgare subsp. vulgare cDNA clone HB03P20
5-PRIME, mRNA sequence
Length = 523
Score = 186 bits (401), Expect = 2e-046
Identities = 72/109 (66%), Positives = 87/109 (79%)
Frame = +2 / +2
Query: 8 VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQ 187
+LLSRLR+FL+PGYPYEE L +HN T MC Y P FN+FNFTKGGL Q NHG+ Q LQ
Sbjct: 197 LLLSRLRMFLNPGYPYEESLMGYHNVTSMNMCMYFPKFNAFNFTKGGLAQFNHGQGQALQ 376
Query: 188 YAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILG 334
YAV +FLA+LY+DY+E+ + PGWYCGPNF T + LR FA+SQL+YILG
Sbjct: 377 YAVANSFLAALYADYMESVNVPGWYCGPNFMTVDDLRSFAKSQLNYILG 523
Score = 113 bits (242), Expect = 1e-024
Identities = 58/100 (58%), Positives = 64/100 (64%)
Frame = -2 / -2
Query: 333 PRM*SSCDLANLRRTSVV*KLGPQYHPGVSAASR*SLYREARKAALTAY*SG*GLPWLSC 154
PRM* S DLA RR+S V KLGPQY PG S *S ARK TAY S PWL+
Sbjct: 522 PRM*FS*DLAKERRSSTVMKLGPQYQPGTLTDSM*SA*SAARKELATAYCSAWPWPWLNW 343
Query: 153 ISPPLVKLNELNRGRYEHITLSVWLWNVLSISS*GYPGLR 34
SPPLVKLN LN G+Y H+ + V LW +S SS*G PGLR
Sbjct: 342 ASPPLVKLNALNLGKYMHMFMLVTLWYPMSDSS*G*PGLR 223
>gb|CB859220.1|CB859220 HI09M02w HI Hordeum vulgare subsp. vulgare cDNA clone HI09M02
3-PRIME, mRNA sequence
Length = 649
Score = 166 bits (357), Expect(2) = 2e-044
Identities = 63/98 (64%), Positives = 77/98 (78%)
Frame = +2 / -2
Query: 341 PLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPD 520
P+KMSYVVG+G KYPKR HHRGAS P NG+KY C GG KWRD+KKA+P++L GAMV GPD
Sbjct: 648 PMKMSYVVGYGKKYPKRLHHRGASTPKNGIKYSCTGGNKWRDSKKADPHVLTGAMVGGPD 469
Query: 521 RRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTG 634
+ D +KD R +Y EPTL NAGLVAAL++I++ G
Sbjct: 468 KNDKFKDARISYAQNEPTLVGNAGLVAALVAITNSGRG 355
Score = 33.1 bits (66), Expect(2) = 2e-044
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1 / -1
Query: 640 RHR*EHHLLCDSSDVPNAPAAAISMETIER 729
R R EHH+L ++ VP PAAA +E + R
Sbjct: 343 RRRQEHHVLRRAAHVPGRPAAAGHVEAVRR 254
>gb|BF255699.3|BF255699 HVSMEf0007J01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007J01f, mRNA sequence
Length = 833
Score = 158 bits (339), Expect = 6e-038
Identities = 62/99 (62%), Positives = 74/99 (74%)
Frame = +2 / +3
Query: 8 VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQ 187
+LLSRLR+FL+PGYPYEE L +HN T MC Y P FN+FNFTKGGL Q NHG+ Q LQ
Sbjct: 144 LLLSRLRMFLNPGYPYEESLMGYHNVTSMNMCMYFPKFNAFNFTKGGLAQFNHGQGQALQ 323
Query: 188 YAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKF 304
YAV + LA+LY+DY+E+ PGWYCGPN T + LR F
Sbjct: 324 YAVANSLLAALYADYMESVIVPGWYCGPN*MTEDNLRSF 440
>gb|CK125884.1|CK125884 BES1824111A2a04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A0411 5-PRIME, mRNA sequence
Length = 748
Score = 91.8 bits (194), Expect(2) = 4e-029
Identities = 45/117 (38%), Positives = 63/117 (53%)
Frame = +2 / +2
Query: 65 LRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAA 244
L+ + + D +C+ L S N + L+H + LQ+ + +FL + YSD L AA
Sbjct: 2 LQRYRQKADFFVCASLGKQGSGNVKRTPGGLLHHQKWNNLQFVTSGSFLLAAYSDSLAAA 181
Query: 245 DTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
G C + + FA+SQ+DYILG NP SY+VG+G YP HHRGASI
Sbjct: 182 GQAGVRCPAGAASPAEIMAFAKSQVDYILGSNPRGTSYMVGYGFIYPLEAHHRGASI 352
Score = 57.0 bits (118), Expect(2) = 4e-029
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +2 / +2
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGR 637
W K +NPN+L GA+V GPD D + D R NY TE T NA + L ++ + G
Sbjct: 407 WYPRKGSNPNLLDGAIVGGPDEYDNFADERNNYEQTEATTYNNAPFMGVLARLAAGQGGG 586
Query: 638 FGIDKN 655
D++
Sbjct: 587 GRFDRS 604
>gb|AL509770.1|AL509770 AL509770 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02N05u 3',
mRNA sequence
Length = 625
Score = 54.2 bits (112), Expect(5) = 2e-028
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2 / -1
Query: 590 GLVAALISISDIKTGRFGIDKNTIFSAI 673
GLVAALIS++DI TGR+ IDKNTIFSA+
Sbjct: 481 GLVAALISLADIDTGRYSIDKNTIFSAV 398
Score = 45.1 bits (92), Expect(5) = 2e-028
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 279 SKDHKQKADNISLQSFYFCIGMTDHYK 199
Score = 44.6 bits (91), Expect(5) = 2e-028
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 199 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 68
Score = 37.3 bits (75), Expect(5) = 2e-028
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPSS +F +CS+ P R Q GN E+
Sbjct: 423 IRTPSSQQFPQCSRHPHHRRQLGNLEES 340
Score = 21.7 bits (41), Expect(5) = 2e-028
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / -3
Query: 545 RTNYNYT 565
RTNYNYT
Sbjct: 530 RTNYNYT 510
>gb|BF260719.2|BF260719 HVSMEf0022M05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022M05f, mRNA sequence
Length = 541
Score = 126 bits (270), Expect = 2e-028
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +2 / +2
Query: 8 VLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGRPQPLQ 187
+LLSRLR+FL+PGYPYEE L +HN T MC Y P FN+FNFTKGGL Q NHG+ LQ
Sbjct: 302 LLLSRLRMFLNPGYPYEESLMGYHNVTSMNMCMYFPKFNAFNFTKGGLAQFNHGQCHALQ 481
Query: 188 YAVNAAFLASLYSDYLEA 241
YAV +FLA+LY+DY+E+
Sbjct: 482 YAVANSFLAALYADYMES 535
>gb|BF256953.2|BF256953 HVSMEf0011H11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H11f, mRNA sequence
Length = 819
Score = 75.3 bits (158), Expect(3) = 7e-028
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2 / +3
Query: 302 FARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
FARSQ+DY+LGKNPL MSY+VG +K+P HHRGASIP
Sbjct: 243 FARSQVDYVLGKNPLSMSYMVGHSDKFPTHVHHRGASIP 359
Score = 61.1 bits (127), Expect(3) = 7e-028
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2 / +3
Query: 464 DTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 589
++K A+PN+LV A+V GPDR DG+ D R +Y EPTLAA A
Sbjct: 417 NSKGADPNVLVSALVGGPDRHDGFGDDRCSYQRAEPTLAAGA 542
Score = 25.8 bits (50), Expect(3) = 7e-028
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 182 LQYAVNAAFLASLYSDYL 235
+QY ++ FL ++Y+DYL
Sbjct: 126 MQYVSSSVFLLTVYADYL 179
>gb|BJ467008.1|BJ467008 BJ467008 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35i04 3', mRNA sequence
Length = 786
Score = 78.5 bits (165), Expect(2) = 2e-027
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +2 / -3
Query: 263 CGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
CG + LR A+ Q+DY+LG NP+KMSY+VG+G++YP+R HHRG+S+P
Sbjct: 772 CGDISVGPDTLRLQAKKQIDYLLGDNPMKMSYMVGYGDRYPQRIHHRGSSLP 617
Score = 64.3 bits (134), Expect(2) = 2e-027
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = +2 / -3
Query: 410 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 589
SI + + CK G + D+ NPN LVGA+V GP D Y D R +Y +EPT NA
Sbjct: 616 SIKDHPERMACKDGTPYYDSSSPNPNPLVGAIVGGPGEDDSYGDDRADYRKSEPTTYINA 437
Query: 590 GLVAAL 607
LV L
Sbjct: 436 PLVGVL 419
>gb|BU985192.1|BU985192 HF06G12r HF Hordeum vulgare subsp. vulgare cDNA clone HF06G12
5-PRIME, mRNA sequence
Length = 615
Score = 78.5 bits (165), Expect(2) = 2e-027
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +2 / +3
Query: 263 CGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
CG + LR A+ Q+DY+LG NP+KMSY+VG+G++YP+R HHRG+S+P
Sbjct: 84 CGDISVGPDTLRLQAKKQIDYLLGDNPMKMSYMVGYGDRYPQRIHHRGSSLP 239
Score = 64.3 bits (134), Expect(2) = 2e-027
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = +2 / +3
Query: 410 SIPHNGVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANA 589
SI + + CK G + D+ NPN LVGA+V GP D Y D R +Y +EPT NA
Sbjct: 240 SIKDHPERMACKDGTPYYDSSSPNPNPLVGAIVGGPGEDDSYGDDRADYRKSEPTTYINA 419
Query: 590 GLVAAL 607
LV L
Sbjct: 420 PLVGVL 437
>gb|BF259829.2|BF259829 HVSMEf0020G01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020G01f, mRNA sequence
Length = 534
Score = 75.3 bits (158), Expect(3) = 2e-027
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2 / +3
Query: 302 FARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
FARSQ+DY+LGKNPL MSY+VG +K+P HHRGASIP
Sbjct: 243 FARSQVDYVLGKNPLSMSYMVGHSDKFPTHVHHRGASIP 359
Score = 59.3 bits (123), Expect(3) = 2e-027
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2 / +3
Query: 464 DTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLA 580
++K A+PN+LVGA+V GPD DG+ D R NY EPTLA
Sbjct: 417 NSKGADPNVLVGALVGGPDGHDGFVDDRCNYQRAEPTLA 533
Score = 25.8 bits (50), Expect(3) = 2e-027
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 182 LQYAVNAAFLASLYSDYL 235
+QY ++ FL ++Y+DYL
Sbjct: 126 MQYVSSSVFLLTVYADYL 179
>gb|CK123410.1|CK123410 BES1824103p13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P133 5-PRIME, mRNA sequence
Length = 579
Score = 77.1 bits (162), Expect(2) = 1e-026
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +2 / +1
Query: 263 CGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIP 418
CG T + LR AR Q+DY+LG NP+ MSY+VG+G KYPK+ HHR +S+P
Sbjct: 28 CGGVAVTPQRLRAIARRQVDYLLGSNPMGMSYMVGYGAKYPKKLHHRASSLP 183
Score = 63.4 bits (132), Expect(2) = 1e-026
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 431 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 607
K GC G+ + ANPN+ VGA+V GP++ D + D R++Y ++EP NA LV AL
Sbjct: 205 KIGCSQGFTGLYSGAANPNVHVGAVVGGPNQNDQFPDQRSDYEHSEPATYINAPLVGAL 381
>gb|AJ434494.1|AJ434494 AJ434494 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012H05F1, mRNA sequence
Length = 477
Score = 106 bits (226), Expect(2) = 2e-026
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = +2 / +2
Query: 428 VKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 607
+KY C GG KWRD+KKA+P++L GAMV GPD+ D +KD R +Y EPTL NAGLVAAL
Sbjct: 5 IKYSCTGGNKWRDSKKADPHVLTGAMVGGPDKNDKFKDARISYAQNEPTLVGNAGLVAAL 184
Query: 608 ISISDIKTG 634
++I++ G
Sbjct: 185 VAITNSGRG 211
Score = 33.1 bits (66), Expect(2) = 2e-026
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 640 RHR*EHHLLCDSSDVPNAPAAAISMETIER 729
R R EHH+L ++ VP PAAA +E + R
Sbjct: 223 RRRQEHHVLRRAAHVPGRPAAAGHVEAVRR 312
>gb|BQ766009.1|BQ766009 EBro03_SQ008_D24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_D24 5', mRNA sequence
Length = 613
Score = 64.8 bits (135), Expect(3) = 4e-026
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2 / +2
Query: 305 ARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
AR+Q+DY+LG NP +SY+VG+G KYP R HHR ASI
Sbjct: 308 ARAQVDYVLGSNPRGVSYLVGYGAKYPARVHHRAASI 418
Score = 57.4 bits (119), Expect(3) = 4e-026
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTE 568
W + +NPN+LVGA+V GPDRRD ++D R NY TE
Sbjct: 473 WFGRRSSNPNVLVGAIVGGPDRRDRFRDNRDNYMQTE 583
Score = 34.1 bits (68), Expect(3) = 4e-026
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 182 LQYAVNAAFLASLYSDYLEAA 244
+QY NAAFL S Y+DYL A
Sbjct: 182 MQYVTNAAFLLSTYADYLAGA 244
>gb|BI960651.1|BI960651 HVSMEn0025K02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025K02f, mRNA sequence
Length = 632
Score = 64.8 bits (135), Expect(3) = 1e-025
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 305 ARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
AR+Q+DY+LG NP +SY+VG+G KYP R HHR ASI
Sbjct: 234 ARAQVDYVLGSNPRGVSYLVGYGAKYPARVHHRAASI 344
Score = 56.1 bits (116), Expect(3) = 1e-025
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +3
Query: 443 KGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTE 568
+G W +NPN+LVGA+V GPDR D ++D R NY +TE
Sbjct: 384 QGFXHWFXRXSSNPNVLVGAIVGGPDREDRFRDNRDNYMHTE 509
Score = 34.1 bits (68), Expect(3) = 1e-025
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 182 LQYAVNAAFLASLYSDYLEAA 244
+QY NAAFL S Y+DYL A
Sbjct: 108 MQYVTNAAFLLSTYADYLAGA 170
>gb|BG369061.1|BG369061 HVSMEi0021J08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021J08f, mRNA sequence
Length = 797
Score = 66.6 bits (139), Expect(3) = 4e-025
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / +3
Query: 293 LRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
L ARSQ +YILG+NPL++SY+VG+G +YP HHR ASI
Sbjct: 213 LLALARSQAEYILGRNPLRLSYMVGYGPRYPAHVHHRAASI 335
Score = 55.1 bits (114), Expect(3) = 4e-025
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 631
W K+ NPN+L GA+V GP+ RD ++D R NY TE A +VA + ++ T
Sbjct: 390 WFARKRPNPNVLTGAIVGGPNCRDEFRDDRGNYVQTEACTYNTAPMVAVFARLHNLST 563
Score = 30.9 bits (61), Expect(3) = 4e-025
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 182 LQYAVNAAFLASLYSDYLEAA 244
LQYA +AAFL ++YS YL A
Sbjct: 96 LQYASSAAFLLTVYSRYLAGA 158
>gb|BU995458.1|BU995458 HM10F02r HM Hordeum vulgare subsp. vulgare cDNA clone HM10F02
5-PRIME, mRNA sequence
Length = 628
Score = 66.6 bits (139), Expect(3) = 5e-025
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / +1
Query: 293 LRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
L ARSQ +YILG+NPL++SY+VG+G +YP HHR ASI
Sbjct: 217 LLALARSQAEYILGRNPLRLSYMVGYGPRYPAHVHHRAASI 339
Score = 55.1 bits (114), Expect(3) = 5e-025
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2 / +1
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 631
W K+ NPN+L GA+V GP+ RD ++D R NY TE A +VA + ++ T
Sbjct: 394 WFARKRPNPNVLTGAIVGGPNCRDEFRDDRGNYVQTEACTYNTAPMVAVFARLHNLST 567
Score = 30.9 bits (61), Expect(3) = 5e-025
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 182 LQYAVNAAFLASLYSDYLEAA 244
LQYA +AAFL ++YS YL A
Sbjct: 100 LQYASSAAFLLTVYSRYLAGA 162
>gb|CA024900.1|CA024900 HZ50K09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50K09
5-PRIME, mRNA sequence
Length = 509
Score = 103 bits (220), Expect(2) = 8e-025
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +2 / +1
Query: 425 GVKYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAA 604
G+K C GG KWRD+KKA+P++L GAMV GPD+ D +KD R +Y EPTL NAGLVAA
Sbjct: 13 GIKSSCTGGNKWRDSKKADPHVLTGAMVGGPDKNDKFKDARISYAQNEPTLVGNAGLVAA 192
Query: 605 LISISDIKTG 634
L+ I++ G
Sbjct: 193 LVFITNSGRG 222
Score = 30.4 bits (60), Expect(2) = 8e-025
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1 / +2
Query: 652 EHHLLCDSSDVPNAPAAAISMETIER 729
EHH+L ++ VP PAAA +E + R
Sbjct: 245 EHHVLRRAAHVPGRPAAAGHVEAVRR 322
>gb|AL500279.1|AL500279 AL500279 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05N22r 3', mRNA sequence
Length = 503
Score = 45.1 bits (92), Expect(4) = 2e-024
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 800 AKARDRKADSISL*SFYFCINMTDQYK 880
+K +KAD+ISL SFYFCI MTD YK
Sbjct: 293 SKDHKQKADNISLQSFYFCIGMTDHYK 213
Score = 44.6 bits (91), Expect(4) = 2e-024
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 881 ILCQT*IGSCVHRVELIFGGLVAIGTPAHV*SSFL*KWYLYKLF 1012
I+CQ GSCV V+L F LV + P+ FL*KWYL K F
Sbjct: 213 IICQPWTGSCVRFVKLNFEVLVVLHIPSSRVKFFL*KWYLCKSF 82
Score = 43.7 bits (89), Expect(4) = 2e-024
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2 / -3
Query: 599 AALISISDIKTGRFGIDKNTIFSAI 673
+ALIS +DI TGR+ IDKNTIFSA+
Sbjct: 486 SALIS*ADIDTGRYSIDKNTIFSAV 412
Score = 34.5 bits (69), Expect(4) = 2e-024
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 648 IRTPSSLRFLRCSQRPRRRHQHGNHREA 731
IRTPS +F +CS+ P R Q GN E+
Sbjct: 437 IRTPSFQQFPQCSRHPHHRRQLGNLEES 354
>gb|CK123273.1|CK123273 BES1824103c09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C093 5-PRIME, mRNA sequence
Length = 594
Score = 75.3 bits (158), Expect(2) = 3e-024
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = +2 / +2
Query: 209 LASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKMSYVVGFGNKYPK 388
L + YSD L AA G C + + FA+SQ+DYILG NP SY+VG+G YP
Sbjct: 17 LLAAYSDSLAAAGQAGVRCPAGAASPAEIMAFAKSQVDYILGSNPRGTSYMVGYGFIYPL 196
Query: 389 RPHHRGASI 415
HHRGASI
Sbjct: 197 EAHHRGASI 223
Score = 57.0 bits (118), Expect(2) = 3e-024
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +2 / +2
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGR 637
W K +NPN+L GA+V GPD D + D R NY TE T NA + L ++ + G
Sbjct: 278 WYPRKGSNPNLLDGAIVGGPDEYDNFADERNNYEQTEATTYNNAPFMGVLARLAAGQGGG 457
Query: 638 FGIDKN 655
D++
Sbjct: 458 GRFDRS 475
>gb|BQ755502.1|BQ755502 EBed07_SQ002_E24_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_E24 5', mRNA sequence
Length = 397
Score = 66.6 bits (139), Expect(2) = 4e-021
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / +2
Query: 293 LRKFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
L ARSQ +YILG+NPL++SY+VG+G +YP HHR ASI
Sbjct: 23 LLALARSQAEYILGRNPLRLSYMVGYGPRYPAHVHHRAASI 145
Score = 55.1 bits (114), Expect(2) = 4e-021
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2 / +2
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 631
W K+ NPN+L GA+V GP+ RD ++D R NY TE A +VA + ++ T
Sbjct: 200 WFARKRPNPNVLTGAIVGGPNCRDEFRDDRGNYVQTEACTYNTAPMVAVFARLHNLST 373
>gb|CA019511.1|CA019511 HV12D10r HV Hordeum vulgare subsp. vulgare cDNA clone HV12D10
5-PRIME, mRNA sequence
Length = 480
Score = 62.9 bits (131), Expect(2) = 7e-021
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 305 ARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASI 415
AR+Q+DY+LG NP +SY+VG+G K+P R HHR ASI
Sbjct: 114 ARAQVDYVLGSNPRGISYLVGYGAKFPARVHHRAASI 224
Score = 57.9 bits (120), Expect(2) = 7e-021
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +2 / +3
Query: 458 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDI 625
W K ANPN++VGA+V GPDR D ++D R NY TE A +V ++ +
Sbjct: 279 WFGRKSANPNVVVGAIVGGPDRHDRFRDDRVNYMQTEACTYNTAPMVGMFAMLNRV 446
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 489,809,800
Number of Sequences: 312970
Number of extensions: 7681097
Number of successful extensions: 54465
Number of sequences better than 1.0e-020: 77
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12883744134
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)