TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131555.2.3
(622 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. v... 213 9e-055
gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. v... 213 9e-055
gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. v... 213 9e-055
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 203 9e-052
gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA li... 203 9e-052
gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA li... 203 9e-052
gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA li... 203 9e-052
gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA li... 203 9e-052
gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA li... 203 9e-052
gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA li... 203 9e-052
gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. v... 181 3e-045
gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. v... 177 4e-044
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 173 6e-043
gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA li... 171 2e-042
gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA li... 144 9e-038
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 142 2e-033
gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow st... 131 3e-030
gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA li... 126 1e-028
gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA li... 126 1e-028
gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 ... 125 2e-028
gb|AV918067.1|AV918067 AV918067 K. Sato unpublished cDNA li... 122 2e-027
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 116 8e-026
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 115 3e-025
gb|BF267436.2|BF267436 HV_CEa0017O20f Hordeum vulgare seedl... 68 3e-024
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 86 3e-024
gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA li... 82 5e-024
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 105 2e-022
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 105 2e-022
gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA li... 87 3e-022
>gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
3-PRIME, mRNA sequence
Length = 505
Score = 213 bits (459), Expect = 9e-055
Identities = 86/121 (71%), Positives = 107/121 (88%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SS I++ Y G+R+TVEN LRN+VDVRDVADALLLAYEKPEASGRYICSS +KV+DMI+
Sbjct: 496 SSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMIS 317
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
+LKTLYP+Y YPKNFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* S
Sbjct: 316 VLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*AS 137
Query: 260 S 258
+
Sbjct: 136 N 134
Score = 158 bits (339), Expect = 3e-038
Identities = 66/122 (54%), Positives = 86/122 (70%)
Frame = +3 / +2
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 131 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 310
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
QY YHI +FY *TADV SRR W F+ Q KS+ NITNIH I E++F S+ S EI ++
Sbjct: 311 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSITFSFEIINENI 490
Query: 615 AA 620
A
Sbjct: 491 TA 496
Score = 137 bits (293), Expect = 7e-032
Identities = 73/121 (60%), Positives = 80/121 (66%)
Frame = -1 / -2
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA SL IS+E L K S I WMFVML LF+W K+Q+RLD TSAV Q*K LI**
Sbjct: 498 RAVIFSLIISKENVIL*KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI** 319
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
Y*RP I TLIPK L K L+ A RN RS GG+S L*R PS NPT+HLAS* EH
Sbjct: 318 AY*RPYIRHTLIPKTL*KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEH 139
Query: 262 P 260
P
Sbjct: 138 P 136
Score = 104 bits (221), Expect = 6e-022
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 383 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 204
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 203 FREDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 93
Score = 87.7 bits (185), Expect(2) = 3e-026
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +1 / +3
Query: 397 KFLG*G*DGYKVFSMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFST 576
KFLG* GYKVFS IIS TF ELQMYRPDASGF FLS+FST
Sbjct: 273 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 452
Query: 577 VSRSPVKYSRMILLL 621
VSRSP++ ILLL
Sbjct: 453 VSRSPLR*LMRILLL 497
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / +3
Query: 259 LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSF 351
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 135 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 227
>gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
5-PRIME, mRNA sequence
Length = 633
Score = 213 bits (459), Expect = 9e-055
Identities = 86/121 (71%), Positives = 107/121 (88%)
Frame = -3 / +3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SS I++ Y G+R+TVEN LRN+VDVRDVADALLLAYEKPEASGRYICSS +KV+DMI+
Sbjct: 114 SSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMIS 293
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
+LKTLYP+Y YPKNFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* S
Sbjct: 294 VLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*AS 473
Query: 260 S 258
+
Sbjct: 474 N 476
Score = 158 bits (339), Expect = 3e-038
Identities = 66/122 (54%), Positives = 86/122 (70%)
Frame = +3 / -2
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 479 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 300
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
QY YHI +FY *TADV SRR W F+ Q KS+ NITNIH I E++F S+ S EI ++
Sbjct: 299 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSITFSFEIINENI 120
Query: 615 AA 620
A
Sbjct: 119 TA 114
Score = 137 bits (293), Expect = 7e-032
Identities = 73/121 (60%), Positives = 80/121 (66%)
Frame = -1 / +1
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA SL IS+E L K S I WMFVML LF+W K+Q+RLD TSAV Q*K LI**
Sbjct: 112 RAVIFSLIISKENVIL*KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI** 291
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
Y*RP I TLIPK L K L+ A RN RS GG+S L*R PS NPT+HLAS* EH
Sbjct: 292 AY*RPYIRHTLIPKTL*KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEH 471
Query: 262 P 260
P
Sbjct: 472 P 474
Score = 104 bits (222), Expect = 4e-022
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / +2
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 227 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 406
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 407 FREDPRR*RGILQSIWRPELSIQPXKVWLLMLANSWF 517
Score = 87.7 bits (185), Expect(2) = 3e-026
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +1 / -3
Query: 397 KFLG*G*DGYKVFSMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFST 576
KFLG* GYKVFS IIS TF ELQMYRPDASGF FLS+FST
Sbjct: 337 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 158
Query: 577 VSRSPVKYSRMILLL 621
VSRSP++ ILLL
Sbjct: 157 VSRSPLR*LMRILLL 113
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / -3
Query: 259 LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSF 351
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 475 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 383
>gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
3-PRIME, mRNA sequence
Length = 665
Score = 213 bits (459), Expect = 9e-055
Identities = 86/121 (71%), Positives = 107/121 (88%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SS I++ Y G+R+TVEN LRN+VDVRDVADALLLAYEKPEASGRYICSS +KV+DMI+
Sbjct: 552 SSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMIS 373
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
+LKTLYP+Y YPKNFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* S
Sbjct: 372 VLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*AS 193
Query: 260 S 258
+
Sbjct: 192 N 190
Score = 158 bits (339), Expect = 3e-038
Identities = 66/122 (54%), Positives = 86/122 (70%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 187 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 366
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
QY YHI +FY *TADV SRR W F+ Q KS+ NITNIH I E++F S+ S EI ++
Sbjct: 367 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSITFSFEIINENI 546
Query: 615 AA 620
A
Sbjct: 547 TA 552
Score = 137 bits (293), Expect = 7e-032
Identities = 73/121 (60%), Positives = 80/121 (66%)
Frame = -1 / -1
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA SL IS+E L K S I WMFVML LF+W K+Q+RLD TSAV Q*K LI**
Sbjct: 554 RAVIFSLIISKENVIL*KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI** 375
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
Y*RP I TLIPK L K L+ A RN RS GG+S L*R PS NPT+HLAS* EH
Sbjct: 374 AY*RPYIRHTLIPKTL*KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEH 195
Query: 262 P 260
P
Sbjct: 194 P 192
Score = 104 bits (221), Expect = 6e-022
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / -2
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 439 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 260
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 259 FREDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 149
Score = 87.7 bits (185), Expect(2) = 3e-026
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +1 / +2
Query: 397 KFLG*G*DGYKVFSMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFST 576
KFLG* GYKVFS IIS TF ELQMYRPDASGF FLS+FST
Sbjct: 329 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 508
Query: 577 VSRSPVKYSRMILLL 621
VSRSP++ ILLL
Sbjct: 509 VSRSPLR*LMRILLL 553
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / +2
Query: 259 LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSF 351
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 191 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 283
>gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a13 3', mRNA sequence
Length = 767
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 468 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 289
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 288 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 109
Query: 260 S 258
+
Sbjct: 108 N 106
Score = 160 bits (343), Expect(2) = 2e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 462
Query: 615 AA 620
A
Sbjct: 463 TA 468
Score = 135 bits (290), Expect = 2e-031
Identities = 73/136 (53%), Positives = 84/136 (61%)
Frame = -1 / -1
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 470 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 291
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 290 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 111
Query: 262 PATTVPSAVFASELFL 215
P + + +S F+
Sbjct: 110 PTRENNACIASSFWFM 63
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 463
Query: 616 LL 621
LL
Sbjct: 464 LL 469
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -2
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQL 104
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 42 AYLFHCLH 65
>gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 3', mRNA sequence
Length = 630
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 438 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 259
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 258 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 79
Query: 260 S 258
+
Sbjct: 78 N 76
Score = 160 bits (343), Expect = 9e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 73 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 252
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 253 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 432
Query: 615 AA 620
A
Sbjct: 433 TA 438
Score = 135 bits (289), Expect = 2e-031
Identities = 73/136 (53%), Positives = 83/136 (61%)
Frame = -1 / -2
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 440 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 261
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 260 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 81
Query: 262 PATTVPSAVFASELFL 215
P + + S F+
Sbjct: 80 PTRENNACIAXSFWFM 33
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 74 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 253
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 254 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 433
Query: 616 LL 621
LL
Sbjct: 434 LL 439
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 325 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 146
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 145 CREDPRRQCRILQSIWHPELSIQL 74
>gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 3', mRNA sequence
Length = 751
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -2
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 471 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 292
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 291 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 112
Query: 260 S 258
+
Sbjct: 111 N 109
Score = 160 bits (343), Expect(2) = 2e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 106 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 285
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 286 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 465
Query: 615 AA 620
A
Sbjct: 466 TA 471
Score = 135 bits (290), Expect = 2e-031
Identities = 73/136 (53%), Positives = 84/136 (61%)
Frame = -1 / -3
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 473 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 294
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 293 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 114
Query: 262 PATTVPSAVFASELFL 215
P + + +S F+
Sbjct: 113 PTRENNACIASSFWFM 66
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 107 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 286
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 287 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 466
Query: 616 LL 621
LL
Sbjct: 467 LL 472
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -1
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 358 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 179
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 178 CREDPRRQCRILQSIWHPELSIQL 107
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 45 AYLFHCLH 68
>gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 3', mRNA sequence
Length = 661
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 469 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 290
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 289 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 110
Query: 260 S 258
+
Sbjct: 109 N 107
Score = 160 bits (343), Expect(2) = 2e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +2
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 104 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 283
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 284 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 463
Query: 615 AA 620
A
Sbjct: 464 TA 469
Score = 135 bits (290), Expect = 2e-031
Identities = 73/136 (53%), Positives = 84/136 (61%)
Frame = -1 / -2
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 471 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 292
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 291 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 112
Query: 262 PATTVPSAVFASELFL 215
P + + +S F+
Sbjct: 111 PTRENNACIASSFWFM 64
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +3
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 105 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 284
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 285 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 464
Query: 616 LL 621
LL
Sbjct: 465 LL 470
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 356 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 177
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 176 CREDPRRQCRILQSIWHPELSIQL 105
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +1
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 43 AYLFHCLH 66
>gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 3', mRNA sequence
Length = 662
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 468 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 289
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 288 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 109
Query: 260 S 258
+
Sbjct: 108 N 106
Score = 160 bits (343), Expect(2) = 2e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 462
Query: 615 AA 620
A
Sbjct: 463 TA 468
Score = 135 bits (290), Expect = 2e-031
Identities = 73/136 (53%), Positives = 84/136 (61%)
Frame = -1 / -1
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 470 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 291
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 290 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 111
Query: 262 PATTVPSAVFASELFL 215
P + + +S F+
Sbjct: 110 PTRENNACIASSFWFM 63
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 463
Query: 616 LL 621
LL
Sbjct: 464 LL 469
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -2
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQL 104
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 42 AYLFHCLH 65
>gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 3', mRNA sequence
Length = 663
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 468 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 289
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 288 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 109
Query: 260 S 258
+
Sbjct: 108 N 106
Score = 160 bits (343), Expect = 9e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 462
Query: 615 AA 620
A
Sbjct: 463 TA 468
Score = 134 bits (287), Expect = 5e-031
Identities = 71/121 (58%), Positives = 78/121 (64%)
Frame = -1 / -2
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 470 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 291
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 290 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 111
Query: 262 P 260
P
Sbjct: 110 P 108
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 463
Query: 616 LL 621
LL
Sbjct: 464 LL 469
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQL 104
>gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 3', mRNA sequence
Length = 681
Score = 203 bits (437), Expect = 9e-052
Identities = 86/121 (71%), Positives = 101/121 (83%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 486 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 307
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E++L D+VESYKA GILN* S
Sbjct: 306 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*AS 127
Query: 260 S 258
+
Sbjct: 126 N 124
Score = 160 bits (343), Expect(2) = 2e-039
Identities = 69/122 (56%), Positives = 85/122 (69%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+CFVGF++V+EG LYR E PP LL+FLR K+FGI V WI GL
Sbjct: 121 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 300
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDF 614
Q VY I NFY TADV SR W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F
Sbjct: 301 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENF 480
Query: 615 AA 620
A
Sbjct: 481 TA 486
Score = 135 bits (290), Expect = 2e-031
Identities = 73/136 (53%), Positives = 84/136 (61%)
Frame = -1 / -2
Query: 622 RAAKSSLNISQEIARLLKTYSEIWWMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI** 443
RA K S NIS+E RL K S I WM VML LFFW K Q+ LD TSAV +*K L+ *
Sbjct: 488 RAVKFSSNISKENMRL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS* 309
Query: 442 TY*RPCIHLTLIPKILWKMMSTLYTALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEH 263
T+*RP I TLIPK L + LRN RS GG S L*R PS T+ NPTKHLAS* EH
Sbjct: 308 TF*RPYIQHTLIPKTLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEH 129
Query: 262 PATTVPSAVFASELFL 215
P + + +S F+
Sbjct: 128 PTRENNACIASSFWFM 81
Score = 131 bits (280), Expect = 4e-030
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = +1 / +2
Query: 256 *LDVQFRMPNAL*DSTVSRRDSSIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVF 435
*LD QFRMP+AL*DST+S R S GLK+HPSF KFLG* GYKVF
Sbjct: 122 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 301
Query: 436 SMFIISATFIACELQMYRPDASGFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMIL 615
MF+ S TFI LQMYRPDASGF F ++FSTVS SP++Y R IL
Sbjct: 302 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRIL 481
Query: 616 LL 621
LL
Sbjct: 482 LL 487
Score = 105 bits (223), Expect = 3e-022
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K+R +WT+HLQ + NKS * KH+EDL+S + LSQK G + + *ET+EA V+LQA
Sbjct: 373 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 194
Query: 327 YRGIPPRHC*ILQSIWHPELNIQL 256
R P R C ILQSIWHPEL+IQL
Sbjct: 193 CREDPRRQCRILQSIWHPELSIQL 122
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +3
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 60 AYLFHCLH 83
>gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
3-PRIME, mRNA sequence
Length = 565
Score = 181 bits (390), Expect = 3e-045
Identities = 73/99 (73%), Positives = 90/99 (90%)
Frame = -3 / -1
Query: 554 MVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNS 375
+VDVRDVADALLLAYEKPEASGRYICSS +KV+DMI++LKTLYP+Y YPKNFVE + N+
Sbjct: 565 LVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNT 386
Query: 374 VYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TSS 258
+YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* S+
Sbjct: 385 IYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 269
Score = 140 bits (301), Expect = 5e-033
Identities = 58/99 (58%), Positives = 73/99 (73%)
Frame = +3 / +2
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 266 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 445
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIH 551
QY YHI +FY *TADV SRR W F+ Q KS+ NITNIH
Sbjct: 446 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH 562
Score = 127 bits (272), Expect = 5e-029
Identities = 62/97 (63%), Positives = 68/97 (70%)
Frame = -1 / -2
Query: 550 WMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI**TY*RPCIHLTLIPKILWKMMSTLY 371
WMFVML LF+W K+Q+RLD TSAV Q*K LI** Y*RP I TLIPK L K L+
Sbjct: 561 WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL*KSKEILF 382
Query: 370 TALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEHP 260
A RN RS GG+S L*R PS NPT+HLAS* EHP
Sbjct: 381 IARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHP 271
Score = 104 bits (221), Expect = 6e-022
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 518 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 339
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 338 FREDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 228
>gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. vulgare cDNA clone HX10J08
3-PRIME, mRNA sequence
Length = 562
Score = 177 bits (382), Expect = 4e-044
Identities = 72/98 (73%), Positives = 88/98 (89%)
Frame = -3 / -1
Query: 551 VDVRDVADALLLAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNSV 372
VDVRDVADALLLAYE PEASGRYICSS +KV+DMI++LKTLYP+Y YPKNFVE + N++
Sbjct: 562 VDVRDVADALLLAYEXPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTI 383
Query: 371 YSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TSS 258
YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* S+
Sbjct: 382 YSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 269
Score = 140 bits (300), Expect = 7e-033
Identities = 58/99 (58%), Positives = 73/99 (73%)
Frame = +3 / +2
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 266 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 445
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNITNIH 551
QY YHI +FY *TADV SRR W F+ Q KS+ NITNIH
Sbjct: 446 QYAYHIRDFYWY*TADVPSRRLWXFICQ*KSIGNITNIH 562
Score = 127 bits (271), Expect = 7e-029
Identities = 62/97 (63%), Positives = 67/97 (69%)
Frame = -1 / -2
Query: 550 WMFVMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI**TY*RPCIHLTLIPKILWKMMSTLY 371
WMFVML LF+W K Q+RLD TSAV Q*K LI** Y*RP I TLIPK L K L+
Sbjct: 561 WMFVMLPMLFYWHMKXQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL*KSKEILF 382
Query: 370 TALRNCRSWGGASSL*RNPSATLLNPTKHLAS*IEHP 260
A RN RS GG+S L*R PS NPT+HLAS* EHP
Sbjct: 381 IARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHP 271
Score = 101 bits (216), Expect = 3e-021
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = -2 / -3
Query: 501 RSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQAYR 322
R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA+R
Sbjct: 512 RGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQAFR 333
Query: 321 GIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
P R ILQSIW PEL+IQ LL L + F
Sbjct: 332 EDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 228
>gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 5', mRNA sequence
Length = 593
Score = 173 bits (373), Expect = 6e-043
Identities = 72/100 (72%), Positives = 83/100 (83%)
Frame = -3 / +3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 294 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 473
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIE 321
ILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E
Sbjct: 474 ILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVE 593
Score = 119 bits (254), Expect = 2e-026
Identities = 55/100 (55%), Positives = 65/100 (65%)
Frame = +3 / -1
Query: 321 LYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGLQYVYHISNFYCM*TADVSSRRF 500
LYR E PP LL+FLR K+FGI V WI GLQ VY I NFY TADV SR
Sbjct: 593 LYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCL 414
Query: 501 WLFVSQKKSVSNITNIHHISEYVFNSLAISCEIFKDDFAA 620
W+F+ QKKS+ NIT+IH I E +F SL S EIF+++F A
Sbjct: 413 WIFICQKKSIGNITDIH*IPESIFYSLMFSFEIFEENFTA 294
Score = 100 bits (213), Expect = 7e-021
Identities = 49/100 (49%), Positives = 55/100 (55%)
Frame = +1 / -2
Query: 322 SIGLKLHPSFCXXXXXXXXXXXXXXKFLG*G*DGYKVFSMFIISATFIACELQMYRPDAS 501
S GLK+HPSF KFLG* GYKVF MF+ S TFI LQMYRPDAS
Sbjct: 592 STGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDAS 413
Query: 502 GFXXXXXXXXXXXXXXXIFLSMFSTVSRSPVKYSRMILLL 621
GF F ++FSTVS SP++Y R ILLL
Sbjct: 412 GFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLL 293
>gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38j13 3', mRNA sequence
Length = 411
Score = 171 bits (369), Expect = 2e-042
Identities = 69/94 (73%), Positives = 85/94 (90%)
Frame = -3 / -1
Query: 539 DVADALLLAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNSVYSSE 360
DVADALLLAYEKPEASGRYICSS +KV+DMI++LKTLYP+Y YPKNFVE + N++YSSE
Sbjct: 408 DVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSSE 229
Query: 359 KLQKLGWSFKPIEESLRDTVESYKAFGILN*TSS 258
KLQKLGW F+P+E++L D+VESY+A G+LN* S+
Sbjct: 228 KLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 127
Score = 132 bits (283), Expect = 2e-030
Identities = 55/96 (57%), Positives = 70/96 (72%)
Frame = +3 / +1
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 124 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 303
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKSVSNIT 542
QY YHI +FY *TADV SRR W F+ Q KS+ NIT
Sbjct: 304 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNIT 411
Score = 117 bits (250), Expect = 6e-026
Identities = 59/94 (62%), Positives = 65/94 (69%)
Frame = -1 / -2
Query: 541 VMLLTLFFWLTKSQKRLDDTSAVHMQ*KLLI**TY*RPCIHLTLIPKILWKMMSTLYTAL 362
VML LF+W K+Q+RLD TSAV Q*K LI** Y*RP I TLIPK L K L+ A
Sbjct: 410 VMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL*KSKEILFIAR 231
Query: 361 RNCRSWGGASSL*RNPSATLLNPTKHLAS*IEHP 260
RN RS GG+S L*R PS NPT+HLAS* EHP
Sbjct: 230 RNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHP 129
Score = 104 bits (221), Expect = 6e-022
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 376 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 197
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 196 FREDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 86
>gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38j13 5', mRNA sequence
Length = 430
Score = 144 bits (309), Expect(2) = 9e-038
Identities = 57/83 (68%), Positives = 73/83 (87%)
Frame = -3 / +3
Query: 506 KPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKP 327
K EASGRYICSS +KV+DMI++LKTLYP+Y YPKNFVE + N++YSSEKLQKLGW F+P
Sbjct: 36 KTEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNTIYSSEKLQKLGWIFRP 215
Query: 326 IEESLRDTVESYKAFGILN*TSS 258
+E++L D+VESY+A G+LN* S+
Sbjct: 216 LEKTLGDSVESYRASGVLN*ASN 284
Score = 111 bits (237), Expect = 4e-024
Identities = 47/91 (51%), Positives = 64/91 (70%)
Frame = +3 / -3
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLRAVYRVDIIFHKIFGIRVRWIQGL 434
+ GCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V I GL
Sbjct: 287 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 108
Query: 435 QYVYHISNFYCM*TADVSSRRFWLFVSQKKS 527
QY YHI +FY *TADV SRR + +++
Sbjct: 107 QYAYHIRDFYWY*TADVPSRRLGFSYANRRA 15
Score = 103 bits (219), Expect = 1e-021
Identities = 52/97 (53%), Positives = 64/97 (65%)
Frame = -2 / +2
Query: 507 KARSVWTIHLQFTCNKSC*YDKHTEDLVSILPLSQKFCGR*CQLCIQL*ETAEAGVELQA 328
K R VWT+HLQF+ +KS *YDK TEDL+S + LSQK C + + L ET+EA V+LQA
Sbjct: 35 KNRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 214
Query: 327 YRGIPPRHC*ILQSIWHPELNIQLRLFHLLFLPPNSF 217
+R P R ILQSIW PEL+IQ LL L + F
Sbjct: 215 FREDPRR*RGILQSIWRPELSIQPGKVWLLMLANSWF 325
Score = 32.2 bits (64), Expect(2) = 9e-038
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / +1
Query: 539 DVADALLLAYEKP 501
DVADALLLAYEKP
Sbjct: 4 DVADALLLAYEKP 42
>gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
5-PRIME, mRNA sequence
Length = 636
Score = 142 bits (304), Expect = 2e-033
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = -3 / +3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SS I++ Y G+R+TVEN LRN+VDVRDVADALLLAYEKPEASGRYICSS +KV+DMI+
Sbjct: 387 SSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMIS 566
Query: 440 ILKTLYPSYPYPKNF 396
+LKTLYP+Y YPKNF
Sbjct: 567 VLKTLYPTYTYPKNF 611
>gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_C10 5', mRNA sequence
Length = 213
Score = 131 bits (281), Expect = 3e-030
Identities = 53/69 (76%), Positives = 63/69 (91%)
Frame = -3 / +2
Query: 563 LRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDD 384
L+N+ DVRDVADALLLAYEKPEASGRYICSS +KV+DMI++LKTLYP+Y YPKNFVE +
Sbjct: 5 LKNLEDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVE 184
Query: 383 VNSVYSSEK 357
N++YSSEK
Sbjct: 185 GNTIYSSEK 211
>gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7d16 3', mRNA sequence
Length = 643
Score = 126 bits (270), Expect = 1e-028
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK+++ G +T+ N +VDVRDVADALLL Y K S RYICS + + D++
Sbjct: 617 SSKVLVYMIKGGPDTMNNKFFPIVDVRDVADALLLLYNKAGPSERYICSLEQMDLKDLLA 438
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
I+K++YP+Y Y V+ D N +SEKL+ LGW + IEE+L D++ESYK G+L +
Sbjct: 437 IMKSMYPNYSYVDKMVDVDFNVGVTSEKLKNLGWKPRKIEETLADSIESYKKAGLLGVSD 258
Query: 260 SYDCSI 243
C +
Sbjct: 257 DEPCRL 240
>gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37l05 3', mRNA sequence
Length = 534
Score = 126 bits (270), Expect = 1e-028
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK+++ G +T+ N +VDVRDVADALLL Y K S RYICS + + D++
Sbjct: 472 SSKVLVYMIKGGPDTMNNKFFPIVDVRDVADALLLLYNKAGPSERYICSLEQMDLKDLLA 293
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
I+K++YP+Y Y V+ D N +SEKL+ LGW + IEE+L D++ESYK G+L +
Sbjct: 292 IMKSMYPNYSYVDKMVDVDFNVGVTSEKLKNLGWKPRKIEETLADSIESYKKAGLLGVSD 113
Query: 260 SYDCSI 243
C +
Sbjct: 112 DEPCRL 95
>gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095J23f, mRNA sequence
Length = 500
Score = 125 bits (268), Expect = 2e-028
Identities = 52/126 (41%), Positives = 83/126 (65%)
Frame = -3 / +2
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK ++ G + + N L ++V+VRDVADALLL YEK E+ GRYIC+ + I D+++
Sbjct: 56 SSKFLIYVTNGGPDVMSNKLGHIVNVRDVADALLLVYEKAESYGRYICTPNNICTTDLVD 235
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
+LK ++P Y Y N V+ D + SS+KL+ LGW + +EE+L D+V+ Y+ G+L ++
Sbjct: 236 LLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGWKPRKLEETLSDSVDCYEKAGLLQVSA 415
Query: 260 SYDCSI 243
+ C +
Sbjct: 416 ARPCRL 433
>gb|AV918067.1|AV918067 AV918067 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17k13 3', mRNA sequence
Length = 292
Score = 122 bits (261), Expect = 2e-027
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = -3 / -3
Query: 497 ASGRYICSSHAIKVADMINILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEE 318
AS RYICS IKV+D+ NILKTLYP+Y YPKNF E + V SSEKLQKLGW+F+P+E+
Sbjct: 287 ASXRYICSPVRIKVSDVXNILKTLYPTYTYPKNFTEVEEGKVMSSEKLQKLGWTFRPVEK 108
Query: 317 SLRDTVESYKAFGILN*TSS 258
+L +VES KA GILN* S+
Sbjct: 107 TLGXSVESNKASGILN*ASN 48
>gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A21f, mRNA sequence
Length = 919
Score = 116 bits (249), Expect = 8e-026
Identities = 51/124 (41%), Positives = 78/124 (62%)
Frame = -3 / +2
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK ++ G + + N L ++VDVRDVADALLL YEK E+ GRYIC+ + I D+++
Sbjct: 371 SSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVD 550
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TS 261
+LK ++P Y Y N V+ D + SS+KL+ LGW E+L D+V+ Y+ +L ++
Sbjct: 551 LLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGWKPPKAGETLSDSVDWYEKAXLLQGSA 730
Query: 260 SYDC 249
+ C
Sbjct: 731 ARPC 742
>gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014B22f, mRNA sequence
Length = 867
Score = 115 bits (245), Expect = 3e-025
Identities = 50/116 (43%), Positives = 74/116 (63%)
Frame = -3 / +1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK ++ G + + N L ++VDVRDVADALLL YEK E+ GRYIC+ + I D+++
Sbjct: 175 SSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVD 354
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGIL 273
+LK ++P Y Y N V+ D + SS+KL+ LGW + +EE+ D V+ + G L
Sbjct: 355 LLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGWKPRKLEETPLDIVDCFDKAGPL 522
>gb|BF267436.2|BF267436 HV_CEa0017O20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017O20f, mRNA sequence
Length = 934
Score = 67.5 bits (141), Expect(3) = 9e-024
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = -3 / -3
Query: 407 PKNFVEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TSS 258
PK + + V SSEKLQKLGW+F+P+E++L D+VES KA GILN* S+
Sbjct: 296 PKTLRKVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESPKASGILN*ASN 147
Score = 62.9 bits (131), Expect(5) = 3e-024
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3 / +3
Query: 255 VAGCSIQDAKCFVGFNSVAEGFLYRLEAPPQLLQFLR 365
+ GCS+QDA+CF GF +V+EG LYR E PP LL+FLR
Sbjct: 144 LVGCSVQDARCFGGFYTVSEGLLYRPEGPP*LLKFLR 254
Score = 57.4 bits (119), Expect(3) = 9e-024
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -3 / -1
Query: 515 AYEKPEASGRYICSSHAIKVADMINILKTLYPS 417
AYE PEA G YICS IKV D+INILKTLYP+
Sbjct: 406 AYENPEAFGGYICSPVGIKVFDVINILKTLYPT 308
Score = 48.7 bits (100), Expect(5) = 3e-024
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1 / +3
Query: 421 GYKVFSMFIISATFIACELQMYRPDASGF 507
GYKVF MF+ S TFI LQMY P+ASGF
Sbjct: 312 GYKVFKMFMTSKTFIPTGLQMYPPNASGF 398
Score = 25.8 bits (50), Expect(5) = 3e-024
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 516 QKKSVSNITNIHHISEYVF 572
+KK+++NIT+IH+ S+ F
Sbjct: 409 KKKNMANITDIHYNSKIYF 465
Score = 23.1 bits (44), Expect(5) = 3e-024
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2 / +3
Query: 386 HLPQNFWDK 412
HLP +FWDK
Sbjct: 276 HLP*SFWDK 302
Score = 22.1 bits (42), Expect(3) = 9e-024
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -2
Query: 416 YPYPKNFVE 390
Y YPKNF E
Sbjct: 306 YTYPKNFTE 280
Score = 22.1 bits (42), Expect(5) = 3e-024
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +2
Query: 180 AMLFHCLH 203
A LFHCLH
Sbjct: 83 AYLFHCLH 106
>gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 3', mRNA sequence
Length = 633
Score = 86.3 bits (182), Expect(2) = 3e-024
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = -3 / -3
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SS+ ++ + G + + L ++VDVRDVADALLL YE PEA+GR+IC+ H I +++
Sbjct: 454 SSQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFITARELLG 275
Query: 440 ILKTLYPSYP 411
+LK++YP YP
Sbjct: 274 LLKSMYPGYP 245
Score = 45.1 bits (92), Expect(2) = 3e-024
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3 / -3
Query: 368 SSEKLQKLGWSFKPIEESLRDTVESYKAFGILN*TSSYDCSICCF 234
+S KL+KLGWS +P+ E++ DTVE + G L D + C F
Sbjct: 196 TSGKLEKLGWSSRPLRETITDTVECCREAGFLQDADGGDDTPCRF 62
>gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13a15 3', mRNA sequence
Length = 633
Score = 81.7 bits (172), Expect(2) = 5e-024
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
++K + G +T+ N +VDVRDVADALLL Y K + RYICS H I + D+++
Sbjct: 606 TTKFLRYIIKGGPDTINNKFWPIVDVRDVADALLLLYNKAKPCQRYICSEHQIDIKDLVD 427
Query: 440 ILKTLYPSYPY 408
++K++YPSY Y
Sbjct: 426 LMKSMYPSYNY 394
Score = 48.7 bits (100), Expect(2) = 5e-024
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = -3 / -1
Query: 395 VEDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGILN 270
VE D +S+KL+ LGW + +EE+L D++ESY+ GILN
Sbjct: 306 VEVDYKVGMNSDKLKNLGWKPRKLEETLADSIESYEKSGILN 181
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 105 bits (225), Expect = 2e-022
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = -3 / +2
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSKI+L+Y G+ ETVEN N+VDVRDVADALLLAYE PEASGRYICS IKV+D+IN
Sbjct: 461 SSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVIN 640
Query: 440 IL 435
IL
Sbjct: 641 IL 646
>gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF18P19
5-PRIME, mRNA sequence
Length = 529
Score = 105 bits (224), Expect = 2e-022
Identities = 44/94 (46%), Positives = 63/94 (67%)
Frame = -3 / +2
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
SSK ++ G + + N L ++VDVRDVADALLL YEK E+ GRYIC+ + I D+++
Sbjct: 248 SSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVD 427
Query: 440 ILKTLYPSYPYPKNFVEDDVNSVYSSEKLQKLGW 339
+LK ++P Y Y N V+ D + SS+KL+ LGW
Sbjct: 428 LLKKMHPQYSYVNNIVDVDRKAPISSQKLKDLGW 529
>gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd27a15, mRNA
sequence
Length = 735
Score = 86.8 bits (183), Expect(2) = 3e-022
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = -3 / -1
Query: 620 SSKIILEYFTGDRETVENILRNMVDVRDVADALLLAYEKPEASGRYICSSHAIKVADMIN 441
+S+++L G + ++L ++VDVRDVADALLL YEKPE+SGRYIC+ + I M+
Sbjct: 603 TSELLLYVIKGGPNVLNDMLWHIVDVRDVADALLLVYEKPESSGRYICAPNYISTNAMLE 424
Query: 440 ILKTLYPSYPYPK 402
+LK YP Y Y K
Sbjct: 423 LLKKTYPDYNYVK 385
Score = 37.7 bits (76), Expect(2) = 3e-022
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -3 / -1
Query: 392 EDDVNSVYSSEKLQKLGWSFKPIEESLRDTVESYKAFGIL 273
++ ++ +S KL LGW + +EE+L D+++ Y+ GIL
Sbjct: 366 QNSPTTLITSGKLNDLGWKPRALEETLLDSIDYYRKTGIL 247
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 276,620,276
Number of Sequences: 312970
Number of extensions: 3687982
Number of successful extensions: 35117
Number of sequences better than 1.0e-020: 44
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6574589895
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)