TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.472
(1282 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE456003.2|BE456003 HVSMEg0019D18f Hordeum vulgare pre-a... 477 e-134
gb|CA031839.1|CA031839 HX11E11r HX Hordeum vulgare subsp. v... 444 e-124
gb|BU985043.1|BU985043 HF05P14r HF Hordeum vulgare subsp. v... 422 e-117
gb|BU990403.1|BU990403 HF24P07r HF Hordeum vulgare subsp. v... 378 e-107
gb|AL504995.1|AL504995 AL504995 Hordeum vulgare Barke roots... 330 e-105
gb|BJ462487.1|BJ462487 BJ462487 K. Sato unpublished cDNA li... 367 e-103
gb|AV916096.1|AV916096 AV916096 K. Sato unpublished cDNA li... 329 e-103
gb|AV916551.1|AV916551 AV916551 K. Sato unpublished cDNA li... 367 e-101
gb|CA019892.1|CA019892 HV13K04r HV Hordeum vulgare subsp. v... 338 4e-092
gb|CA013590.1|CA013590 HT08O24r HT Hordeum vulgare subsp. v... 325 2e-088
gb|BG344544.2|BG344544 HVSMEg0009J09f Hordeum vulgare pre-a... 179 8e-078
gb|BJ471924.1|BJ471924 BJ471924 K. Sato unpublished cDNA li... 274 7e-073
gb|AV918079.1|AV918079 AV918079 K. Sato unpublished cDNA li... 263 2e-072
gb|BF627171.2|BF627171 HVSMEb0004C05f Hordeum vulgare seedl... 272 3e-072
gb|CA007132.1|CA007132 HU06O08r HU Hordeum vulgare subsp. v... 268 4e-071
gb|AV935159.1|AV935159 AV935159 K. Sato unpublished cDNA li... 258 5e-071
gb|BI959937.1|BI959937 HVSMEn0022H15f Hordeum vulgare rachi... 226 2e-058
gb|AV921215.1|AV921215 AV921215 K. Sato unpublished cDNA li... 204 9e-055
gb|CB877416.1|CB877416 HP04N04T HP Hordeum vulgare subsp. v... 194 5e-052
gb|CB876437.1|CB876437 HX11E11w HX Hordeum vulgare subsp. v... 176 1e-046
gb|BM098135.2|BM098135 EBpi03_SQ002_K11_R pistil, 4 DPA, no... 175 4e-043
gb|AJ433770.1|AJ433770 AJ433770 S00002 Hordeum vulgare subs... 169 2e-042
gb|BE437793.1|BE437793 SFR007.E11F990621 ITEC SFR Barley Le... 160 7e-042
gb|CA010692.1|CA010692 HT08O24u HT Hordeum vulgare subsp. v... 149 2e-038
gb|AL504150.1|AL504150 AL504150 Hordeum vulgare Barke roots... 156 2e-037
gb|CA007336.1|CA007336 HU07J19r HU Hordeum vulgare subsp. v... 150 1e-035
gb|AV935139.1|AV935139 AV935139 K. Sato unpublished cDNA li... 138 2e-035
gb|CD663274.1|CD663274 UCRHV18_04dh02_b1 Drought-stressed D... 62 1e-029
gb|BG416154.2|BG416154 HVSMEk0009P18f Hordeum vulgare testa... 60 1e-025
gb|AL503866.1|AL503866 AL503866 Hordeum vulgare Barke roots... 58 5e-025
gb|BJ464458.1|BJ464458 BJ464458 K. Sato unpublished cDNA li... 59 6e-024
gb|AY560327.2| Hordeum vulgare subsp. vulgare plastidial AD... 56 5e-023
gb|BJ466101.1|BJ466101 BJ466101 K. Sato unpublished cDNA li... 90 4e-021
>gb|BE456003.2|BE456003 HVSMEg0019D18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019D18f, mRNA sequence
Length = 870
Score = 477 bits (1036), Expect = e-134
Identities = 198/214 (92%), Positives = 208/214 (97%)
Frame = -1 / +2
Query: 949 EDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTDKSPYQYRGMFHALGTVYREE 770
E+AQL+P+LRLGAGA AGIIAMSATYPMDMVRGRITVQT+KSPYQYRGMFHALGTVYREE
Sbjct: 2 ENAQLSPILRLGAGATAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALGTVYREE 181
Query: 769 GFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFGLANDNELHVVTRLGCGAVA 590
GFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F LA DNELHVVTRLGCGAVA
Sbjct: 182 GFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFDLAKDNELHVVTRLGCGAVA 361
Query: 589 GTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALY 410
GTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALY
Sbjct: 362 GTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALY 541
Query: 409 KGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
KGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 542 KGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 643
Score = 380 bits (824), Expect = e-105
Identities = 171/214 (79%), Positives = 178/214 (83%)
Frame = +3 / -1
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 642 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 463
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEFVWS 668
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F W
Sbjct: 462 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAFDWR 283
Query: 669 SQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA*NIPRYW*GDLSV*TVI 848
SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A*NIPRYW*GD SV*TVI
Sbjct: 282 SQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNA*NIPRYW*GDFSV*TVI 103
Query: 849 LPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASS 950
LPLTIS+G*VAD+AMIPA APAPRRK G+S*A S
Sbjct: 102 LPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFS 1
Score = 338 bits (733), Expect = 3e-092
Identities = 137/212 (64%), Positives = 160/212 (75%)
Frame = -3 / +1
Query: 944 CSAYSALAPWSWSMCWYHSYVCYLPDGYG*GKDHCSDRQISLPVPWYVSCTGYSLP*RRL 765
CSA S LAPWSWS WYHS+VCYL GYG*G D+CSDR++SLPVPWYVSC G+S+P*RRL
Sbjct: 7 CSA*SNLAPWSWSHSWYHSHVCYLSHGYG*G*DYCSDREVSLPVPWYVSCIGHSVP*RRL 186
Query: 764 SCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFIWPCK*QRAARSYKAWVWSCGGN 585
C IQR+ASI + SCS+CW L C+ V + LA P K I CK Q AARS KAW+ SCG N
Sbjct: 187 PCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCIRSCKGQ*AARSNKAWMRSCGWN 366
Query: 584 HWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQG 405
H DC IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CIQE+CS R WCS+Q
Sbjct: 367 HRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQR 546
Query: 404 SCAELSQGGALNCHCICDLRGCEGCARSRDED 309
SC++LS+GGA H + +RG E C+RSRDED
Sbjct: 547 SCSQLSEGGAFYRHRVRHVRGRERCSRSRDED 642
Score = 335 bits (726), Expect = 3e-091
Identities = 141/221 (63%), Positives = 171/221 (77%)
Frame = +2 / -3
Query: 287 KRPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHA 466
+R S YPHLYS*+I H LV + +G+ HHL *V +KT V+ST +F+ NS PECI+H
Sbjct: 664 RRVDSSVYPHLYS*NIFHGLVRDERDGDRRHHLH*VGNKTFVQSTKTFVANSFPECINHT 485
Query: 467 IVLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICK 646
IVLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 484 IVLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCK 305
Query: 647 AK*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQCMKHTTVLVGR 826
+ I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QCMKHTTVLVGR
Sbjct: 304 IECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQCMKHTTVLVGR 125
Query: 827 FVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSIL 949
+CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL
Sbjct: 124 LLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSIL 2
Score = 282 bits (611), Expect = 2e-075
Identities = 133/205 (64%), Positives = 151/205 (73%)
Frame = +1 / -2
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
H S+PR + +W+ +APP LS QD C EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 620 HLSRPRT*RTRWR*KAPPSLSWEQDLCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 441
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSGVASL*GTH 690
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+L+G AS T
Sbjct: 440 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMHLTGGASPSETR 261
Query: 691 IQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVHETYHGTGREICLSEQ*SFP*PYPS 870
Q+S* QH EQL+ MEA+LCI+H SLLHG L P+HETYHGTGRE LSEQ*S+P*PYP
Sbjct: 260 TQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMHETYHGTGRETSLSEQ*SYP*PYPW 81
Query: 871 GK*QT*L*YQHMLQLQGARAE*AEH 945
K*QT L*YQ LQLQGAR +*AEH
Sbjct: 80 DK*QTWL*YQLWLQLQGARLD*AEH 6
Score = 267 bits (578), Expect = 8e-071
Identities = 125/191 (65%), Positives = 134/191 (70%)
Frame = -2 / +3
Query: 948 RMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTSTVVCFMHWVQSTVKK 769
RMLSL++SCALELE LVS* CLLL WIWLG G LFRQ +LPTSTVVCFMHW Q TVKK
Sbjct: 3 RMLSLVQSCALELEPQLVS*PCLLLIPWIWLGVGLLFRQRSLPTSTVVCFMHWAQCTVKK 182
Query: 768 AFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQIHLALQMTTSCT*LQGLGVELWR 589
A VLYT+ GFH * ELF ML T L S +TG S Q+H LQ T SCT* QGL ELW
Sbjct: 183 ASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQMHSILQRTMSCT**QGLDAELWL 362
Query: 588 EPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKKHSSTMA*SMHSGRLFVMKELVLST 409
EP RL HT LM SGE CRW G M L KAK+HSSTM MHSG+LF K LVL T
Sbjct: 363 EP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKRHSSTMVWLMHSGKLFATKVLVLCT 542
Query: 408 RVLCRTQSRWC 376
+VL TQ RWC
Sbjct: 543 KVLFPTQ*RWC 575
>gb|CA031839.1|CA031839 HX11E11r HX Hordeum vulgare subsp. vulgare cDNA clone HX11E11
5-PRIME, mRNA sequence
Length = 623
Score = 444 bits (964), Expect = e-124
Identities = 182/204 (89%), Positives = 195/204 (95%)
Frame = -1 / +1
Query: 1054 GTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACAGIIAMSAT 875
G RIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA AGIIAMSAT
Sbjct: 10 GRGLCRIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATAGIIAMSAT 189
Query: 874 YPMDMVRGRITVQTDKSPYQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFA 695
YPMDMVRGRITVQT+KSPYQYRGMFHALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFA
Sbjct: 190 YPMDMVRGRITVQTEKSPYQYRGMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFA 369
Query: 694 VYESLKDWLLQTNSFGLANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSH 515
VYESLKDWLLQ+N+F LA DNELHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSH
Sbjct: 370 VYESLKDWLLQSNAFDLAKDNELHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSH 549
Query: 514 ADSIVTGQGKEALQYNGMIDAFRK 443
A SIVTG+GKEALQYNGM+DAFRK
Sbjct: 550 AASIVTGEGKEALQYNGMVDAFRK 621
Score = 384 bits (833), Expect = e-106
Identities = 170/200 (85%), Positives = 179/200 (89%)
Frame = +3 / -1
Query: 441 VFLNASIMPLYWSASLPCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVT 620
VFLNAS +PLYWSASLP PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVT
Sbjct: 623 VFLNASTIPLYWSASLPSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVT 444
Query: 621 TCSSLSFARPNEFVWSSQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA* 800
TCSSLSFAR N F W SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A*
Sbjct: 443 TCSSLSFARSNAFDWRSQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNA* 264
Query: 801 NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHR 980
NIPRYW*GD SV*TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A SSPVC R* ++
Sbjct: 263 NIPRYW*GDFSV*TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFSSPVCCR*RYK 84
Query: 981 IPFDACS*LKNFTAEFGTIL 1040
IP DACS*LKNFTAEFGTIL
Sbjct: 83 IPLDACS*LKNFTAEFGTIL 24
Score = 313 bits (678), Expect = 1e-084
Identities = 128/200 (64%), Positives = 148/200 (74%)
Frame = -3 / +3
Query: 1040 KDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHSYVCYLPDGY 861
+DC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS+VCYL GY
Sbjct: 24 QDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHSHVCYLSHGY 203
Query: 860 G*GKDHCSDRQISLPVPWYVSCTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VP 681
G*G D+CSDR++SLPVPWYVSC G+S+P*RRL C IQR+ASI + SCS+CW L C+ V
Sbjct: 204 G*G*DYCSDREVSLPVPWYVSCIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVS 383
Query: 680 QRLATPDKFIWPCK*QRAARSYKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYC 501
+ LA P K I CK Q AARS KAW+ SCG NH DC IP+*C QEK+ADG LE C YC
Sbjct: 384 EGLAPPVKCIRSCKGQ*AARSNKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYC 563
Query: 500 YWARQRSTPVQWHDRCIQED 441
YW RQR TPVQW+ CIQE+
Sbjct: 564 YWRRQRGTPVQWYG*CIQEN 623
Score = 312 bits (675), Expect = 3e-084
Identities = 130/198 (65%), Positives = 156/198 (78%)
Frame = +2 / -3
Query: 446 PECIDHAIVLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYV 625
PECI+H IVLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YV
Sbjct: 618 PECINHTIVLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYV 439
Query: 626 QLVVICKAK*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQCMKH 805
QL+V+CK + I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QCMKH
Sbjct: 438 QLIVLCKIECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQCMKH 259
Query: 806 TTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQNS 985
TTVLVGR +CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL SLL V QN+
Sbjct: 258 TTVLVGRLLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILIPSLLPVKIQNT 79
Query: 986 L*RLLVAKKLHGRIWNNP 1039
* LL+A++ H RIW+NP
Sbjct: 78 P*CLLIAEEFHSRIWDNP 25
Score = 272 bits (588), Expect = 3e-072
Identities = 130/198 (65%), Positives = 148/198 (74%)
Frame = +1 / -2
Query: 445 S*MHRSCHCTGVLLCLAQ*Q*SQHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LR 624
S*MH+ HCTGV LCL Q*Q* QH S++PSA FS* HQ GM QS WF PQL QAL LR
Sbjct: 619 S*MHQPYHCTGVPLCLLQ*Q*KQHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLR 440
Query: 625 AARCHLQGQMNLSGVASL*GTHIQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVHET 804
AA C LQ +M+L+G AS T Q+S* QH EQL+ MEA+LCI+H SLLHG L P+HET
Sbjct: 439 AAHCPLQDRMHLTGGASPSETRTQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMHET 260
Query: 805 YHGTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTEF 984
YHGTGRE LSEQ*S+P*PYP K*QT L*YQ LQLQGAR +*AEH QSV G+ T++
Sbjct: 259 YHGTGRETSLSEQ*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSHPQSVAGKDTKY 80
Query: 985 PLTPARS*KTSRQNLEQS 1038
PL A S*+ S+QNL QS
Sbjct: 79 PLMLAHS*RISQQNLGQS 26
Score = 259 bits (559), Expect = 3e-068
Identities = 126/199 (63%), Positives = 136/199 (68%)
Frame = -2 / +2
Query: 1038 GLFQILP*SFLATSRRQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIW 859
GL QIL *+ A S+ Q FC T NRL RMLSL++SCALELE LVS* CLLL WIW
Sbjct: 26 GLSQILL*NSSAMSKHQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIW 205
Query: 858 LGEGSLFRQTNLPTSTVVCFMHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPS 679
LG G LFRQ +LPTSTVVCFMHW Q TVKKA VLYT+ GFH * ELF ML T L S
Sbjct: 206 LGVGLLFRQRSLPTSTVVCFMHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL* 385
Query: 678 KTGYSRQIHLALQMTTSCT*LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXX 499
+TG S Q+H LQ T SCT* QGL ELW EP RL HT LM SGE CRW G M
Sbjct: 386 RTGSSSQMHSILQRTMSCT**QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLL 565
Query: 498 LGKAKKHSSTMA*SMHSGR 442
L KAK+HSSTM MHSG+
Sbjct: 566 LEKAKRHSSTMVWLMHSGK 622
>gb|BU985043.1|BU985043 HF05P14r HF Hordeum vulgare subsp. vulgare cDNA clone HF05P14
5-PRIME, mRNA sequence
Length = 573
Score = 422 bits (916), Expect = e-117
Identities = 172/186 (92%), Positives = 182/186 (97%)
Frame = -1 / +2
Query: 1180 PLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSY 1001
PLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 14 PLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSY 193
Query: 1000 EQASKGILWAYRQQTGEEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTDKSP 821
EQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA AGIIAMSATYPMDMVRGRITVQT+KSP
Sbjct: 194 EQASRGILYLYRQQTGDENAQLSPILRLGAGATAGIIAMSATYPMDMVRGRITVQTEKSP 373
Query: 820 YQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFGLA 641
YQYRGMFHALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F LA
Sbjct: 374 YQYRGMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFDLA 553
Query: 640 NDNELH 623
DNELH
Sbjct: 554 KDNELH 571
Score = 352 bits (763), Expect = 2e-096
Identities = 159/187 (85%), Positives = 167/187 (89%)
Frame = +3 / -1
Query: 621 TCSSLSFARPNEFVWSSQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA* 800
TCSSLSFAR N F W SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A*
Sbjct: 573 TCSSLSFARSNAFDWRSQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNA* 394
Query: 801 NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHR 980
NIPRYW*GD SV*TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A SSPVC R* ++
Sbjct: 393 NIPRYW*GDFSV*TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFSSPVCCR*RYK 214
Query: 981 IPFDACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SN 1160
IP DACS*LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S
Sbjct: 213 IPLDACS*LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*SR 34
Query: 1161 IFNRSSG 1181
IFNRSSG
Sbjct: 33 IFNRSSG 13
Score = 280 bits (605), Expect = 1e-074
Identities = 118/187 (63%), Positives = 138/187 (73%)
Frame = -3 / +1
Query: 1181 ST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWTFQGQWYQLCKDCSKFCREVF*L 1002
S * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT QW QLCKDC KFC E+ L
Sbjct: 13 SA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWTV*RQWNQLCKDCPKFCCEILQL 192
Query: 1001 RAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHSYVCYLPDGYG*GKDHCSDRQIS 822
A +KG V LP+TDW CSA S LAPWSWS WYHS+VCYL GYG*G D+CSDR++S
Sbjct: 193 *ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHSHVCYLSHGYG*G*DYCSDREVS 372
Query: 821 LPVPWYVSCTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFIWPC 642
LPVPWYVSC G+S+P*RRL C IQR+ASI + SCS+CW L C+ V + LA P K I C
Sbjct: 373 LPVPWYVSCIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCIRSC 552
Query: 641 K*QRAAR 621
K Q AAR
Sbjct: 553 KGQ*AAR 573
Score = 272 bits (588), Expect = 3e-072
Identities = 119/187 (63%), Positives = 147/187 (78%)
Frame = +2 / -3
Query: 623 VQLVVICKAK*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQCMK 802
VQL+V+CK + I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QCMK
Sbjct: 571 VQLIVLCKIECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQCMK 392
Query: 803 HTTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQN 982
HTTVLVGR +CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL SLL V QN
Sbjct: 391 HTTVLVGRLLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILIPSLLPVKIQN 212
Query: 983 SL*RLLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQY 1162
+ * LL+A++ H RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ
Sbjct: 211 TP*CLLIAEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQD 32
Query: 1163 FQSFKWS 1183
QS K S
Sbjct: 31 LQSLKRS 11
Score = 254 bits (549), Expect = 8e-067
Identities = 120/187 (64%), Positives = 138/187 (73%)
Frame = +1 / -2
Query: 622 RAARCHLQGQMNLSGVASL*GTHIQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVHE 801
RAA C LQ +M+L+G AS T Q+S* QH EQL+ MEA+LCI+H SLLHG L P+HE
Sbjct: 572 RAAHCPLQDRMHLTGGASPSETRTQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMHE 393
Query: 802 TYHGTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTE 981
TYHGTGRE LSEQ*S+P*PYP K*QT L*YQ LQLQGAR +*AEH QSV G+ T+
Sbjct: 392 TYHGTGRETSLSEQ*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSHPQSVAGKDTK 213
Query: 982 FPLTPARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAI 1161
+PL A S*+ S+QNL QSLH+W+HC * VH G FS YT* E+ HCT* C DFEPEA
Sbjct: 212 YPLMLAHS*RISQQNLGQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEAG 33
Query: 1162 FSIVQVE 1182
SI Q E
Sbjct: 32 SSIAQAE 12
Score = 237 bits (511), Expect = 1e-061
Identities = 116/184 (63%), Positives = 129/184 (70%)
Frame = -2 / +3
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 21 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 200
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTS 814
Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWLG G LFRQ +LPTS
Sbjct: 201 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWLGVGLLFRQRSLPTS 380
Query: 813 TVVCFMHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQIHLALQMT 634
TVVCFMHW Q TVKKA VLYT+ GFH * ELF ML T L S +TG S Q+H LQ T
Sbjct: 381 TVVCFMHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQMHSILQRT 560
Query: 633 TSCT 622
SCT
Sbjct: 561 MSCT 572
>gb|BU990403.1|BU990403 HF24P07r HF Hordeum vulgare subsp. vulgare cDNA clone HF24P07
5-PRIME, mRNA sequence
Length = 661
Score = 378 bits (820), Expect(3) = e-107
Identities = 156/167 (93%), Positives = 162/167 (97%)
Frame = -1 / +3
Query: 808 GMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFGLANDNE 629
GMFHALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F LA DNE
Sbjct: 3 GMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFDLAKDNE 182
Query: 628 LHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAF 449
LHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAF
Sbjct: 183 LHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAF 362
Query: 448 RKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
RKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 363 RKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 503
Score = 296 bits (641), Expect(2) = 2e-081
Identities = 131/167 (78%), Positives = 135/167 (80%)
Frame = +3 / -1
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 502 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 323
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEFVWS 668
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F W
Sbjct: 322 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAFDWR 143
Query: 669 SQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA*NIP 809
SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A*NIP
Sbjct: 142 SQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNA*NIP 2
Score = 256 bits (553), Expect(2) = 9e-069
Identities = 105/167 (62%), Positives = 124/167 (74%)
Frame = -3 / +2
Query: 809 WYVSCTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFIWPCK*QR 630
WYVSC G+S+P*RRL C IQR+ASI + SCS+CW L C+ V + LA P K I CK Q
Sbjct: 2 WYVSCIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCIRSCKGQ* 181
Query: 629 AARSYKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCI 450
AARS KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CI
Sbjct: 182 AARSNKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CI 361
Query: 449 QEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDED 309
QE+CS R WCS+QGSC++LS+GGA H + +RG EGC+RSRDED
Sbjct: 362 QENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCSRSRDED 502
Score = 255 bits (552), Expect(2) = 3e-069
Identities = 108/173 (62%), Positives = 131/173 (75%)
Frame = +2 / -3
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 521 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 342
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICKA 649
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 341 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCKI 162
Query: 650 K*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQCMKHT 808
+ I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QCMKHT
Sbjct: 161 ECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQCMKHT 3
Score = 221 bits (478), Expect(2) = 1e-058
Identities = 100/160 (62%), Positives = 116/160 (72%)
Frame = +1 / -2
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 480 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 301
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSGVASL*GTH 690
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+L+G AS T
Sbjct: 300 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMHLTGGASPSETR 121
Query: 691 IQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVHETYH 810
Q+S* QH EQL+ MEA+LCI+H SLLHG L P+HETYH
Sbjct: 120 TQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMHETYH 1
Score = 193 bits (415), Expect(2) = 2e-048
Identities = 91/145 (62%), Positives = 96/145 (66%)
Frame = -2 / +1
Query: 810 VVCFMHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQIHLALQMTT 631
VVCFMHW Q TVKKA VLYT+ GFH * ELF ML T L S +TG S Q+H LQ T
Sbjct: 1 VVCFMHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQMHSILQRTM 180
Query: 630 SCT*LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKKHSSTMA*SMH 451
SCT* QGL ELW EP RL HT LM SGE CRW G M L KAK+HSSTM MH
Sbjct: 181 SCT**QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKRHSSTMVWLMH 360
Query: 450 SGRLFVMKELVLSTRVLCRTQSRWC 376
SG+LF K LVL TRVL TQ RWC
Sbjct: 361 SGKLFATKVLVLCTRVLFPTQ*RWC 435
Score = 27.6 bits (54), Expect(2) = 2e-081
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 627 MLNGASVLLSFYSPCLTKKGN 565
Score = 27.2 bits (53), Expect(2) = 3e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 638 ERALC*MEPRSY 603
Score = 26.3 bits (51), Expect(3) = e-107
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 607 DRGSIQHKALS 639
Score = 25.8 bits (50), Expect(2) = 1e-058
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 637 RGPYAEWSLGPIVL 596
Score = 25.4 bits (49), Expect(2) = 9e-069
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 597 RTIGPRLHSA*GPL 638
Score = 23.5 bits (45), Expect(2) = 2e-048
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 217 TAAPFSIRPS 188
T APFSIRPS
Sbjct: 608 TEAPFSIRPS 637
Score = 23.1 bits (44), Expect(3) = e-107
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 565 VPFFC*AGRVEG 600
>gb|AL504995.1|AL504995 AL504995 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07A23V 5', mRNA sequence
Length = 700
Score = 330 bits (715), Expect(3) = e-105
Identities = 138/163 (84%), Positives = 146/163 (89%)
Frame = -1 / +2
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 86 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 265
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACA 899
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA A
Sbjct: 266 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATA 445
Query: 898 GIIAMSATYPMDMVRGRITVQTDKSPYQYRGMFHALGTVYREE 770
GIIAMSATYPMDMVRGRITVQT+KSPYQYRGMFHALGTVYREE
Sbjct: 446 GIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALGTVYREE 574
Score = 266 bits (575), Expect(3) = 1e-081
Identities = 125/163 (76%), Positives = 132/163 (80%)
Frame = +3 / -2
Query: 771 SSR*TVPSA*NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASS 950
SSR TVP+A*NIPRYW*GD SV*TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A S
Sbjct: 573 SSRYTVPNA*NIPRYW*GDFSV*TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFS 394
Query: 951 SPVC*R*AHRIPFDACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYL 1130
SPVC R* ++IP DACS*LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL
Sbjct: 393 SPVCCR*RYKIPLDACS*LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYL 214
Query: 1131 MLCGF*T*SNIFNRSSGXXXXXXXXXXXXXXXSDLQMVRIKWP 1259
+L GF*T*S IFNRSSG DLQMVR WP
Sbjct: 213 IL*GF*T*SRIFNRSSGATAVLDRPPATPPAKRDLQMVRTWWP 85
Score = 247 bits (534), Expect(2) = 5e-070
Identities = 99/159 (62%), Positives = 115/159 (72%)
Frame = -3 / +1
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 97 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 276
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
QW QLCKDC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS
Sbjct: 277 V*RQWNQLCKDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHS 456
Query: 887 YVCYLPDGYG*GKDHCSDRQISLPVPWYVSCTGYSLP*R 771
+VCYL GYG*G D+CSDR++SLPVPWYVSC G+S+P*R
Sbjct: 457 HVCYLSHGYG*G*DYCSDREVSLPVPWYVSCIGHSVP*R 573
Score = 245 bits (530), Expect(2) = 9e-069
Identities = 107/164 (65%), Positives = 129/164 (78%)
Frame = +2 / -1
Query: 767 AFFTVDCTQCMKHTTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSI 946
+FFTV C QCMKHTTVLVGR +CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSI
Sbjct: 577 SFFTVHCAQCMKHTTVLVGRLLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSI 398
Query: 947 LFTSLLTVGPQNSL*RLLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIV 1126
L SLL V QN+ * LL+A++ H RIW+NPCT+G+IA ++ST+A SP IL+ LN IV
Sbjct: 397 LIPSLLPVKIQNTP*CLLIAEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIV 218
Query: 1127 LDAVRILNLKQYFQSFKWSNSSTRHSACYAAGDERLADGEDKMA 1258
LD VRILNLKQ QS K SNSS R + YA+G+E LADGED +A
Sbjct: 217 LDTVRILNLKQDLQSLKRSNSSPR*ATGYASGEEGLADGEDLVA 86
Score = 217 bits (469), Expect(2) = 7e-060
Identities = 102/163 (62%), Positives = 113/163 (69%)
Frame = +1 / -3
Query: 769 LLHGRLYPVHETYHGTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHP 948
LLHG L P+HETYHGTGRE LSEQ*S+P*PYP K*QT L*YQ LQLQGAR +*AEH
Sbjct: 575 LLHGTLCPMHETYHGTGRETSLSEQ*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHS 396
Query: 949 LHQSVDGRPTEFPLTPARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT 1128
QSV G+ T++PL A S*+ S+QNL QSLH+W+HC * VH G FS YT* E+ HCT
Sbjct: 395 HPQSVAGKDTKYPLMLAHS*RISQQNLGQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT 216
Query: 1129 *CCADFEPEAIFSIVQVEQQQYETXXXXXXXXXATCRW*G*NG 1257
* C DFEPEA SI Q EQQQ TCRW*G G
Sbjct: 215 *YCEDFEPEAGSSIAQAEQQQSSIGHRLRLRRRGTCRW*GPGG 87
Score = 184 bits (396), Expect(2) = 1e-049
Identities = 88/135 (65%), Positives = 98/135 (72%)
Frame = -2 / +3
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 171 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 350
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTS 814
Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWLG G LFRQ +LPTS
Sbjct: 351 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWLGVGLLFRQRSLPTS 530
Query: 813 TVVCFMHWVQSTVKK 769
TVVCFMHW Q TVKK
Sbjct: 531 TVVCFMHWAQCTVKK 575
Score = 58.8 bits (122), Expect(3) = e-105
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1 / +1
Query: 766 FRALYKGWLPSVIGVVPYVGLNF 698
FRALY+GWLPSVIGVVPYVGLNF
Sbjct: 577 FRALYRGWLPSVIGVVPYVGLNF 645
Score = 50.6 bits (104), Expect(3) = 1e-081
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 699 KLRPTYGTTPITDGSHPLYRARK 767
KLRPT GTTPITDGS PLY+ARK
Sbjct: 644 KLRPT*GTTPITDGSQPLYKARK 576
Score = 38.2 bits (77), Expect(2) = 5e-070
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 773 RRLSCSIQRVASICNRSCSICW 708
++L C IQR+ASI + SCS+CW
Sbjct: 570 KKLPCFIQRLASISDWSCSLCW 635
Score = 35.9 bits (72), Expect(2) = 9e-069
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / -1
Query: 697 RS*DQHMEQLRLQMEATLCIEHES 768
+S* QH EQL+ MEA+LCI+H S
Sbjct: 646 KS*GQHKEQLQSLMEASLCIKHGS 575
Score = 35.0 bits (70), Expect(3) = e-105
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 712 VGLNFAVYESLKDWLLQTNS 653
+ L FAVYESLKDWLL + +
Sbjct: 632 LALTFAVYESLKDWLLPSQN 691
Score = 34.1 bits (68), Expect(2) = 7e-060
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2 / -2
Query: 695 SEVETNIWNNSDYRWKPPFV*STKA 769
++V+ NI NNS++ WKP V*ST+A
Sbjct: 648 AKVKANIRNNSNH*WKPASV*STEA 574
Score = 33.1 bits (66), Expect(2) = 1e-049
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2 / +2
Query: 774 KKAFVLYTKGGFHL*SELFHMLVST 700
++A VLYT+ GFH * ELF ML T
Sbjct: 569 EEASVLYTEAGFHQ*LELFLMLALT 643
Score = 26.7 bits (52), Expect(3) = 1e-081
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 669 SQSLRDSYTAKLR 707
SQS RDSYTAK++
Sbjct: 675 SQSFRDSYTAKVK 637
>gb|BJ462487.1|BJ462487 BJ462487 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l03 5', mRNA sequence
Length = 721
Score = 367 bits (796), Expect(3) = e-103
Identities = 153/167 (91%), Positives = 159/167 (95%)
Frame = -1 / +3
Query: 808 GMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFGLANDNE 629
G ALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F LA DNE
Sbjct: 21 GTRXALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFDLAKDNE 200
Query: 628 LHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAF 449
LHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAF
Sbjct: 201 LHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAF 380
Query: 448 RKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
RKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 381 RKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 521
Score = 289 bits (626), Expect(2) = 2e-079
Identities = 128/167 (76%), Positives = 133/167 (79%)
Frame = +3 / -1
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 520 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 341
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEFVWS 668
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F W
Sbjct: 340 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAFDWR 161
Query: 669 SQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA*NIP 809
SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A +P
Sbjct: 160 SQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNAXLVP 20
Score = 245 bits (529), Expect(2) = 5e-066
Identities = 104/169 (61%), Positives = 127/169 (75%)
Frame = +2 / -3
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 539 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 360
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICKA 649
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 359 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCKI 180
Query: 650 K*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQC 796
+ I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QC
Sbjct: 179 ECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQC 33
Score = 244 bits (527), Expect(2) = 3e-065
Identities = 101/163 (61%), Positives = 120/163 (73%)
Frame = -3 / +2
Query: 797 CTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFIWPCK*QRAARS 618
C G+S+P*RRL C IQR+ASI + SCS+CW L C+ V + LA P K I CK Q AARS
Sbjct: 32 CIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCIRSCKGQ*AARS 211
Query: 617 YKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDC 438
KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CIQE+C
Sbjct: 212 NKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENC 391
Query: 437 SS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDED 309
S R WCS+QGSC++LS+GGA H + +RG EGC+RSRDED
Sbjct: 392 SPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCSRSRDED 520
Score = 210 bits (453), Expect(2) = 3e-055
Identities = 96/156 (61%), Positives = 112/156 (71%)
Frame = +1 / -2
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 498 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 319
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSGVASL*GTH 690
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+L+G AS T
Sbjct: 318 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMHLTGGASPSETR 139
Query: 691 IQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVH 798
Q+S* QH EQL+ MEA+LCI+H SLLHG L P+H
Sbjct: 138 TQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMH 31
Score = 182 bits (392), Expect(2) = 3e-045
Identities = 87/141 (61%), Positives = 92/141 (65%)
Frame = -2 / +1
Query: 798 MHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQIHLALQMTTSCT* 619
MHW Q TVKKA VLYT+ GFH * ELF ML T L S +TG S Q+H LQ T SCT*
Sbjct: 31 MHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQMHSILQRTMSCT* 210
Query: 618 LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKKHSSTMA*SMHSGRL 439
QGL ELW EP RL HT LM SGE CRW G M L KAK+HSSTM MHSG+L
Sbjct: 211 *QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKRHSSTMVWLMHSGKL 390
Query: 438 FVMKELVLSTRVLCRTQSRWC 376
F K LVL TRVL TQ RWC
Sbjct: 391 FATKVLVLCTRVLFPTQ*RWC 453
Score = 27.6 bits (54), Expect(2) = 2e-079
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 645 MLNGASVLLSFYSPCLTKKGN 583
Score = 27.2 bits (53), Expect(2) = 5e-066
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 656 ERALC*MEPRSY 621
Score = 26.3 bits (51), Expect(3) = e-103
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 625 DRGSIQHKALS 657
Score = 25.8 bits (50), Expect(2) = 3e-055
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 655 RGPYAEWSLGPIVL 614
Score = 25.4 bits (49), Expect(2) = 3e-065
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 615 RTIGPRLHSA*GPL 656
Score = 23.5 bits (45), Expect(2) = 3e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 217 TAAPFSIRPS 188
T APFSIRPS
Sbjct: 626 TEAPFSIRPS 655
Score = 23.1 bits (44), Expect(3) = e-103
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 583 VPFFC*AGRVEG 618
>gb|AV916096.1|AV916096 AV916096 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1h01 5', mRNA sequence
Length = 623
Score = 329 bits (713), Expect(2) = e-103
Identities = 135/149 (90%), Positives = 145/149 (97%)
Frame = -1 / +2
Query: 1036 IVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACAGIIAMSATYPMDMV 857
IVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA AGIIAMSATYPMDMV
Sbjct: 176 IVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATAGIIAMSATYPMDMV 355
Query: 856 RGRITVQTDKSPYQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLK 677
RGRITVQT+KSPYQYRGMFHALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLK
Sbjct: 356 RGRITVQTEKSPYQYRGMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLK 535
Query: 676 DWLLQTNSFGLANDNELHVVTRLGCGAVA 590
DWLLQ+N+F LA DNELHVVTRLGCGAVA
Sbjct: 536 DWLLQSNAFDLAKDNELHVVTRLGCGAVA 622
Score = 285 bits (616), Expect(2) = 3e-093
Identities = 126/148 (85%), Positives = 133/148 (89%)
Frame = +3 / -3
Query: 591 ATAPHPSLVTTCSSLSFARPNEFVWSSQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKP 770
ATAPHPSLVTTCSSLSFAR N F W SQS RDSYTAKLRPT GTTPITDGS PLY+ARKP
Sbjct: 621 ATAPHPSLVTTCSSLSFARSNAFDWRSQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKP 442
Query: 771 SSR*TVPSA*NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASS 950
SSR TVP+A*NIPRYW*GD SV*TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A S
Sbjct: 441 SSRYTVPNA*NIPRYW*GDFSV*TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFS 262
Query: 951 SPVC*R*AHRIPFDACS*LKNFTAEFGT 1034
SPVC R* ++IP DACS*LKNFTAEFGT
Sbjct: 261 SPVCCR*RYKIPLDACS*LKNFTAEFGT 178
Score = 231 bits (498), Expect = 8e-060
Identities = 96/159 (60%), Positives = 113/159 (71%)
Frame = -3 / +1
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
F+G + C KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS
Sbjct: 145 FKGNGTNCARXCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHS 324
Query: 887 YVCYLPDGYG*GKDHCSDRQISLPVPWYVSCTGYSLP*RRLSCSIQRVASICNRSCSICW 708
+VCYL GYG*G D+CSDR++SLPVPWYVSC G+S+P*RRL C IQR+ASI + SCS+CW
Sbjct: 325 HVCYLSHGYG*G*DYCSDREVSLPVPWYVSCIGHSVP*RRLPCFIQRLASISDWSCSLCW 504
Query: 707 SQLRCI*VPQRLATPDKFIWPCK*QRAARSYKAWVWSCG 591
L C+ V + LA P K I CK Q AARS KAW+ SCG
Sbjct: 505 P*LCCVRVSEGLAPPVKCIRSCKGQ*AARSNKAWMRSCG 621
Score = 224 bits (484), Expect(2) = 4e-071
Identities = 95/148 (64%), Positives = 117/148 (79%)
Frame = +2 / -2
Query: 593 HSSTPKPCNYVQLVVICKAK*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAF 772
HSS KPC YVQL+V+CK + I LE PV + L++S+V+ NI NNS++ WKP V*ST+AF
Sbjct: 619 HSSASKPCYYVQLIVLCKIECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAF 440
Query: 773 FTVDCTQCMKHTTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILF 952
FTV C QCMKHTTVLVGR +CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL
Sbjct: 439 FTVHCAQCMKHTTVLVGRLLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILI 260
Query: 953 TSLLTVGPQNSL*RLLVAKKLHGRIWNN 1036
SLL V QN+ * LL+A++ H RIW+N
Sbjct: 259 PSLLPVKIQNTP*CLLIAEEFHSRIWDN 176
Score = 200 bits (432), Expect = 1e-050
Identities = 97/150 (64%), Positives = 112/150 (74%)
Frame = +1 / -1
Query: 592 PQLHTQAL*LRAARCHLQGQMNLSGVASL*GTHIQRS*DQHMEQLRLQMEATLCIEHESL 771
PQL QAL LRAA C LQ +M+L+G AS T Q+S* QH EQL+ MEA+LCI+H SL
Sbjct: 620 PQLRIQALLLRAAHCPLQDRMHLTGGASPSETRTQQS*GQHKEQLQSLMEASLCIKHGSL 441
Query: 772 LHGRLYPVHETYHGTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPL 951
LHG L P+HETYHGTGRE LSEQ*S+P*PYP K*QT L*YQ LQLQGAR +*AEH
Sbjct: 440 LHGTLCPMHETYHGTGRETSLSEQ*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSH 261
Query: 952 HQSVDGRPTEFPLTPARS*KTSRQNLEQSL 1041
QSV G+ T++PL A S*+ S+QNL Q L
Sbjct: 260 PQSVAGKDTKYPLMLAHS*RISQQNLGQXL 171
Score = 196 bits (422), Expect(2) = 1e-059
Identities = 96/148 (64%), Positives = 104/148 (70%)
Frame = -2 / +3
Query: 1035 LFQILP*SFLATSRRQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWL 856
L QIL *+ A S+ Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWL
Sbjct: 177 LSQILL*NSSAMSKHQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWL 356
Query: 855 GEGSLFRQTNLPTSTVVCFMHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSK 676
G G LFRQ +LPTSTVVCFMHW Q TVKKA VLYT+ GFH * ELF ML T L S +
Sbjct: 357 GVGLLFRQRSLPTSTVVCFMHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*R 536
Query: 675 TGYSRQIHLALQMTTSCT*LQGLGVELW 592
TG S Q+H LQ T SCT* QGL ELW
Sbjct: 537 TGSSSQMHSILQRTMSCT**QGLDAELW 620
Score = 110 bits (235), Expect(3) = 9e-039
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 1162 ILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASKG 983
ILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCAR P + + KG
Sbjct: 49 ILLQVQNPHSIKYNGTVQGLKYIWRTEGLRGLFKGNGTNCARXCPKFCCEILQL*ASIKG 228
Score = 78.0 bits (164), Expect(2) = 3e-093
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +3 / -1
Query: 1029 GTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*S 1157
G LAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S
Sbjct: 182 GQXLAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*S 54
Score = 67.0 bits (140), Expect(2) = e-103
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 1157 ASGSKSAQHQVQWYCSGSQVYLENRGPPWTFQGQWYQLCKDCSK 1026
ASGSKS+Q+QVQW+ S + VY+ENR P WT QW QLCK S+
Sbjct: 54 ASGSKSSQYQVQWHRSRA*VYMENRRPSWTV*RQWNQLCKXLSQ 185
Score = 64.8 bits (135), Expect(2) = 4e-071
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +1 / -2
Query: 1030 EQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEA 1158
+ LH+W+HC * VH G FS YT* E+ HCT* C DFEPEA
Sbjct: 181 DNXLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEA 53
Score = 55.1 bits (114), Expect(2) = 1e-059
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 1158 CFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGL 1033
CFRFKI T SSTM F+ SI GE +A VD +AM P VQG+
Sbjct: 53 CFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGI 178
Score = 54.2 bits (112), Expect(3) = 9e-039
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -1 / +2
Query: 487 KEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVL 326
K QY GM A R EG ALY+G +P+ + VVP + + F YE +KD L
Sbjct: 383 KSPYQYRGMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWL 544
Score = 39.1 bits (79), Expect(3) = 9e-039
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1 / +2
Query: 631 ELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRM 536
+L + RLG GA AG I + YP+D++R R+
Sbjct: 272 QLSPILRLGAGATAGIIAMSATYPMDMVRGRI 367
>gb|AV916551.1|AV916551 AV916551 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17l12 5', mRNA sequence
Length = 601
Score = 367 bits (795), Expect(2) = e-101
Identities = 152/163 (93%), Positives = 158/163 (96%)
Frame = -1 / +2
Query: 796 ALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFGLANDNELHVV 617
ALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F LA DNELHVV
Sbjct: 8 ALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFDLAKDNELHVV 187
Query: 616 TRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAFRKTV 437
TRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAFRKTV
Sbjct: 188 TRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAFRKTV 367
Query: 436 RHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
RHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 368 RHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 496
Score = 288 bits (623), Expect(2) = 9e-079
Identities = 127/163 (77%), Positives = 131/163 (80%)
Frame = +3 / -2
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 495 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 316
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEFVWS 668
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F W
Sbjct: 315 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAFDWR 136
Query: 669 SQSLRDSYTAKLRPTYGTTPITDGSHPLYRARKPSSR*TVPSA 797
SQS RDSYTAKLRPT GTTPITDGS PLY+ARKPSSR TVP+A
Sbjct: 135 SQSFRDSYTAKLRPT*GTTPITDGSQPLYKARKPSSRYTVPNA 7
Score = 245 bits (530), Expect = 3e-064
Identities = 104/170 (61%), Positives = 128/170 (75%)
Frame = +2 / -1
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 514 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 335
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICKA 649
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 334 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCKI 155
Query: 650 K*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPPFV*STKAFFTVDCTQCM 799
+ I LE PV + L++S+V+ NI NNS++ WKP V*ST+AFFTV C QC+
Sbjct: 154 ECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPASV*STEAFFTVHCAQCI 5
Score = 244 bits (527), Expect = 8e-064
Identities = 101/163 (61%), Positives = 120/163 (73%)
Frame = -3 / +1
Query: 797 CTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFIWPCK*QRAARS 618
C G+S+P*RRL C IQR+ASI + SCS+CW L C+ V + LA P K I CK Q AARS
Sbjct: 7 CIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCIRSCKGQ*AARS 186
Query: 617 YKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDC 438
KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CIQE+C
Sbjct: 187 NKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENC 366
Query: 437 SS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDED 309
S R WCS+QGSC++LS+GGA H + +RG EGC+RSRDED
Sbjct: 367 SPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCSRSRDED 495
Score = 210 bits (453), Expect = 1e-053
Identities = 96/156 (61%), Positives = 112/156 (71%)
Frame = +1 / -3
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 473 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 294
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSGVASL*GTH 690
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+L+G AS T
Sbjct: 293 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMHLTGGASPSETR 114
Query: 691 IQRS*DQHMEQLRLQMEATLCIEHESLLHGRLYPVH 798
Q+S* QH EQL+ MEA+LCI+H SLLHG L P+H
Sbjct: 113 TQQS*GQHKEQLQSLMEASLCIKHGSLLHGTLCPMH 6
Score = 182 bits (392), Expect = 4e-045
Identities = 87/141 (61%), Positives = 92/141 (65%)
Frame = -2 / +3
Query: 798 MHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQIHLALQMTTSCT* 619
MHW Q TVKKA VLYT+ GFH * ELF ML T L S +TG S Q+H LQ T SCT*
Sbjct: 6 MHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQMHSILQRTMSCT* 185
Query: 618 LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKKHSSTMA*SMHSGRL 439
QGL ELW EP RL HT LM SGE CRW G M L KAK+HSSTM MHSG+L
Sbjct: 186 *QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKRHSSTMVWLMHSGKL 365
Query: 438 FVMKELVLSTRVLCRTQSRWC 376
F K LVL TRVL TQ RWC
Sbjct: 366 FATKVLVLCTRVLFPTQ*RWC 428
Score = 26.7 bits (52), Expect(2) = 9e-079
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -3
Query: 216 VISFYPPCLQKKHN 257
++SFY PCL KK N
Sbjct: 599 LLSFYSPCLTKKGN 558
Score = 23.1 bits (44), Expect(2) = e-101
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 558 VPFFC*AGRVEG 593
>gb|CA019892.1|CA019892 HV13K04r HV Hordeum vulgare subsp. vulgare cDNA clone HV13K04
5-PRIME, mRNA sequence
Length = 450
Score = 338 bits (732), Expect = 4e-092
Identities = 136/146 (93%), Positives = 142/146 (97%)
Frame = -1 / +3
Query: 826 SPYQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNSFG 647
SPYQYRGMFHALGTVYREEGFRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLQ+N+F
Sbjct: 12 SPYQYRGMFHALGTVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQSNAFD 191
Query: 646 LANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYN 467
LA DNELHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYN
Sbjct: 192 LAKDNELHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYN 371
Query: 466 GMIDAFRKTVRHEGVGALYKGLVPNS 389
GM+DAFRKTVRHEG GALYKGLVPNS
Sbjct: 372 GMVDAFRKTVRHEGFGALYKGLVPNS 449
Score = 287 bits (622), Expect = 7e-077
Identities = 124/146 (84%), Positives = 128/146 (87%)
Frame = +3 / -3
Query: 390 EFGTRPL*RAPTPS*RTVFLNASIMPLYWSASLPCPVTIESAWLQPTICILLLMTSSGYA 569
E GTRPL RAP PS RTVFLNAS +PLYWSASLP PVTIE+A LQPTICILLL TS GYA
Sbjct: 448 ELGTRPLYRAPKPSWRTVFLNASTIPLYWSASLPSPVTIEAA*LQPTICILLLTTSRGYA 269
Query: 570 TVWPMVPATAPHPSLVTTCSSLSFARPNEFVWSSQSLRDSYTAKLRPTYGTTPITDGSHP 749
TV PMVPATAPHPSLVTTCSSLSFAR N F W SQS RDSYTAKLRPT GTTPITDGS P
Sbjct: 268 TVCPMVPATAPHPSLVTTCSSLSFARSNAFDWRSQSFRDSYTAKLRPT*GTTPITDGSQP 89
Query: 750 LYRARKPSSR*TVPSA*NIPRYW*GD 827
LY+ARKPSSR TVP+A*NIPRYW*GD
Sbjct: 88 LYKARKPSSRYTVPNA*NIPRYW*GD 11
Score = 232 bits (501), Expect = 3e-060
Identities = 94/147 (63%), Positives = 111/147 (75%)
Frame = -3 / +2
Query: 830 QISLPVPWYVSCTGYSLP*RRLSCSIQRVASICNRSCSICWSQLRCI*VPQRLATPDKFI 651
++SLPVPWYVSC G+S+P*RRL C IQR+ASI + SCS+CW L C+ V + LA P K I
Sbjct: 8 RVSLPVPWYVSCIGHSVP*RRLPCFIQRLASISDWSCSLCWP*LCCVRVSEGLAPPVKCI 187
Query: 650 WPCK*QRAARSYKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPV 471
CK Q AARS KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQR TPV
Sbjct: 188 RSCKGQ*AARSNKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPV 367
Query: 470 QWHDRCIQEDCSS*RSWCSLQGSCAEL 390
QW+ CIQE+CS R WCS+QGSC++L
Sbjct: 368 QWYG*CIQENCSPRRFWCSVQGSCSQL 448
Score = 232 bits (501), Expect = 3e-060
Identities = 97/149 (65%), Positives = 116/149 (77%)
Frame = +2 / -2
Query: 389 *VRHKTLVESTNSFMTNSLPECIDHAIVLECFFALPSNNRVSMAPTNHLHSSPDDIKRVC 568
*V +KTLV+ST +F+ NS PECI+H IVLEC FA SNNR SM P +HLH SPD+IKRVC
Sbjct: 449 *VGNKTLVQSTKTFVANSFPECINHTIVLECLFAFSSNNRSSMTPADHLHPSPDNIKRVC 270
Query: 569 NSLANGSRHSSTPKPCNYVQLVVICKAK*ICLE*PVFEGLIYSEVETNIWNNSDYRWKPP 748
+SL GS HSS KPC YVQL+V+CK + I LE PV + L++S+V+ NI NNS++ WKP
Sbjct: 269 HSLPYGSSHSSASKPCYYVQLIVLCKIECI*LEEPVLQRLVHSKVKANIRNNSNH*WKPA 90
Query: 749 FV*STKAFFTVDCTQCMKHTTVLVGRFVC 835
V*ST+AFFTV C QCMKHTTVLVGR C
Sbjct: 89 SV*STEAFFTVHCAQCMKHTTVLVGRPSC 3
Score = 210 bits (453), Expect = 1e-053
Identities = 96/146 (65%), Positives = 107/146 (73%)
Frame = +1 / -1
Query: 388 LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*SQHGSNQPSAFFS**HQAGM 567
LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q* QH S++PSA FS* HQ GM
Sbjct: 450 LSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*KQHDSSRPSASFS*QHQEGM 271
Query: 568 QQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSGVASL*GTHIQRS*DQHMEQLRLQMEAT 747
QS WF PQL QAL LRAA C LQ +M+L+G AS T Q+S* QH EQL+ MEA+
Sbjct: 270 PQSALWFQPQLRIQALLLRAAHCPLQDRMHLTGGASPSETRTQQS*GQHKEQLQSLMEAS 91
Query: 748 LCIEHESLLHGRLYPVHETYHGTGRE 825
LCI+H SLLHG L P+HETYHGTGRE
Sbjct: 90 LCIKHGSLLHGTLCPMHETYHGTGRE 13
Score = 196 bits (423), Expect = 2e-049
Identities = 94/150 (62%), Positives = 99/150 (66%)
Frame = -2 / +1
Query: 837 RQTNLPTSTVVCFMHWVQSTVKKAFVLYTKGGFHL*SELFHMLVSTSLYMSPSKTGYSRQ 658
R LPTSTVVCFMHW Q TVKKA VLYT+ GFH * ELF ML T L S +TG S Q
Sbjct: 1 RHEGLPTSTVVCFMHWAQCTVKKASVLYTEAGFHQ*LELFLMLALTLLCTSL*RTGSSSQ 180
Query: 657 IHLALQMTTSCT*LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKKH 478
+H LQ T SCT* QGL ELW EP RL HT LM SGE CRW G M L KAK+H
Sbjct: 181 MHSILQRTMSCT**QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKRH 360
Query: 477 SSTMA*SMHSGRLFVMKELVLSTRVLCRTQ 388
SSTM MHSG+LF K LVL TRVL TQ
Sbjct: 361 SSTMVWLMHSGKLFATKVLVLCTRVLFPTQ 450
>gb|CA013590.1|CA013590 HT08O24r HT Hordeum vulgare subsp. vulgare cDNA clone HT08O24
5-PRIME, mRNA sequence
Length = 632
Score = 325 bits (705), Expect = 2e-088
Identities = 136/161 (84%), Positives = 144/161 (89%)
Frame = -1 / +2
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 149 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 328
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACA 899
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA A
Sbjct: 329 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATA 508
Query: 898 GIIAMSATYPMDMVRGRITVQTDKSPYQYRGMFHALGTVYR 776
GIIAMSATYPMDMVRGRITVQT+KSPYQYRGMFHALGTVYR
Sbjct: 509 GIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALGTVYR 631
Score = 262 bits (567), Expect = 3e-069
Identities = 123/161 (76%), Positives = 130/161 (80%)
Frame = +3 / -3
Query: 777 R*TVPSA*NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSP 956
R TVP+A*NIPRYW*GD SV*TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A SSP
Sbjct: 630 RYTVPNA*NIPRYW*GDFSV*TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFSSP 451
Query: 957 VC*R*AHRIPFDACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLML 1136
VC R* ++IP DACS*LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L
Sbjct: 450 VCCR*RYKIPLDACS*LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL 271
Query: 1137 CGF*T*SNIFNRSSGXXXXXXXXXXXXXXXSDLQMVRIKWP 1259
GF*T*S IFNRSSG DLQMVR WP
Sbjct: 270 *GF*T*SRIFNRSSGATAVLDRPPATPPAKRDLQMVRTWWP 148
Score = 244 bits (528), Expect = 6e-064
Identities = 97/157 (61%), Positives = 113/157 (71%)
Frame = -3 / +1
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 160 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 339
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
QW QLCKDC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS
Sbjct: 340 V*RQWNQLCKDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHS 519
Query: 887 YVCYLPDGYG*GKDHCSDRQISLPVPWYVSCTGYSLP 777
+VCYL GYG*G D+CSDR++SLPVPWYVSC G+S+P
Sbjct: 520 HVCYLSHGYG*G*DYCSDREVSLPVPWYVSCIGHSVP 630
Score = 239 bits (517), Expect = 2e-062
Identities = 105/161 (65%), Positives = 126/161 (78%)
Frame = +2 / -2
Query: 776 TVDCTQCMKHTTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFT 955
TV C QCMKHTTVLVGR +CLNS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL
Sbjct: 631 TVHCAQCMKHTTVLVGRLLCLNSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILIP 452
Query: 956 SLLTVGPQNSL*RLLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDA 1135
SLL V QN+ * LL+A++ H RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD
Sbjct: 451 SLLPVKIQNTP*CLLIAEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDT 272
Query: 1136 VRILNLKQYFQSFKWSNSSTRHSACYAAGDERLADGEDKMA 1258
VRILNLKQ QS K SNSS R + YA+G+E LADGED +A
Sbjct: 271 VRILNLKQDLQSLKRSNSSPR*ATGYASGEEGLADGEDLVA 149
Score = 214 bits (461), Expect = 1e-054
Identities = 100/161 (62%), Positives = 111/161 (68%)
Frame = +1 / -1
Query: 775 HGRLYPVHETYHGTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLH 954
HG L P+HETYHGTGRE LSEQ*S+P*PYP K*QT L*YQ LQLQGAR +*AEH
Sbjct: 632 HGTLCPMHETYHGTGRETSLSEQ*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSHP 453
Query: 955 QSVDGRPTEFPLTPARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*C 1134
QSV G+ T++PL A S*+ S+QNL QSLH+W+HC * VH G FS YT* E+ HCT*
Sbjct: 452 QSVAGKDTKYPLMLAHS*RISQQNLGQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*Y 273
Query: 1135 CADFEPEAIFSIVQVEQQQYETXXXXXXXXXATCRW*G*NG 1257
C DFEPEA SI Q EQQQ TCRW*G G
Sbjct: 272 CEDFEPEAGSSIAQAEQQQSSIGHRLRLRRRGTCRW*GPGG 150
Score = 179 bits (386), Expect = 2e-044
Identities = 86/133 (64%), Positives = 96/133 (72%)
Frame = -2 / +3
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 234 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 413
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTS 814
Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWLG G LFRQ +LPTS
Sbjct: 414 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWLGVGLLFRQRSLPTS 593
Query: 813 TVVCFMHWVQSTV 775
TVVCFMHW Q TV
Sbjct: 594 TVVCFMHWAQCTV 632
>gb|BG344544.2|BG344544 HVSMEg0009J09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009J09f, mRNA sequence
Length = 819
Score = 179 bits (385), Expect(3) = 8e-078
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -1 / +3
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 270 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 449
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKG 983
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+G
Sbjct: 450 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRG 545
Score = 145 bits (312), Expect(3) = 7e-058
Identities = 67/94 (71%), Positives = 69/94 (73%)
Frame = +3 / -3
Query: 978 RIPFDACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*S 1157
+ P DACS*LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S
Sbjct: 550 KYPLDACS*LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*S 371
Query: 1158 NIFNRSSGXXXXXXXXXXXXXXXSDLQMVRIKWP 1259
IFNRSSG DLQMVR WP
Sbjct: 370 RIFNRSSGATAVLDRPPATPPAKRDLQMVRTWWP 269
Score = 124 bits (266), Expect(3) = 1e-050
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +2 / -2
Query: 995 LLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSF 1174
LL+A++ H RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ QS
Sbjct: 533 LLIAEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQDLQSL 354
Query: 1175 KWSNSSTRHSACYAAGDERLADGEDKMA 1258
K SNSS R + YA+G+E LADGED +A
Sbjct: 353 KRSNSSPR*ATGYASGEEGLADGEDLVA 270
Score = 119 bits (254), Expect(2) = 3e-052
Identities = 49/88 (55%), Positives = 58/88 (65%)
Frame = -3 / +2
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 281 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 460
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKG 984
QW QLCKDC KFC E+ L A +KG
Sbjct: 461 V*RQWNQLCKDCPKFCCEILQL*ASIKG 544
Score = 114 bits (244), Expect(3) = 8e-078
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = -1 / +1
Query: 985 GILWAYRQQTGEEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTDKSPYQYRG 806
GIL+ Y QQTG+E+AQL+P+LRLGAGA AGIIAMSATYPMDM RGRITVQT+KS YQ+ G
Sbjct: 544 GILYLYPQQTGDENAQLSPILRLGAGATAGIIAMSATYPMDMGRGRITVQTEKSSYQFPG 723
Query: 805 MFHALG 788
+G
Sbjct: 724 YVFCIG 741
Score = 108 bits (231), Expect(3) = 5e-044
Identities = 51/91 (56%), Positives = 56/91 (61%)
Frame = +1 / -1
Query: 985 PLTPARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAIF 1164
PL A S*+ S+QNL QSLH+W+HC * VH G FS YT* E+ HCT* C DFEPEA
Sbjct: 543 PLMLAHS*RISQQNLGQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEAGS 364
Query: 1165 SIVQVEQQQYETXXXXXXXXXATCRW*G*NG 1257
SI Q EQQQ TCRW*G G
Sbjct: 363 SIAQAEQQQSSIGHRLRLRRRGTCRW*GPGG 271
Score = 106 bits (227), Expect(2) = 3e-052
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = -3 / +3
Query: 989 KGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHSYVCYLPDGYG*GKDHCSDRQISLPVP 810
+G V LP+TDW CSA S LAPWSWS WYHS+VCYL GYG*G+D+CSDR+I LPVP
Sbjct: 540 RGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHSHVCYLSHGYG*GEDYCSDRKIFLPVP 719
Score = 91.3 bits (193), Expect(3) = 7e-058
Identities = 44/60 (73%), Positives = 49/60 (81%)
Frame = +3 / -2
Query: 807 PRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHRIP 986
P W* D SV*TVILPL IS+G*VAD+AMIPA APAPRRK G+S*A SSPVC * ++IP
Sbjct: 722 PGNW*EDFSV*TVILPLPISMG*VADMAMIPAVAPAPRRKIGLS*AFSSPVCCG*RYKIP 543
Score = 89.5 bits (189), Expect(3) = 1e-050
Identities = 39/57 (68%), Positives = 44/57 (77%)
Frame = +2 / -1
Query: 815 LVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQNS 985
LVGRF CLNS+P P HIH +SSRH YDTS SSSKAQ+ +KLSIL SLL V QN+
Sbjct: 714 LVGRFFCLNSNPPPTHIHGISSRHGYDTSCGSSSKAQDWTKLSILIPSLLRVKIQNT 544
Score = 88.6 bits (187), Expect(2) = 1e-031
Identities = 45/83 (54%), Positives = 52/83 (62%)
Frame = -2 / +2
Query: 981 FCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTSTVVC 802
FC T NRL RMLSL++SCALELE LVS* CLLL WIW+G G LFRQ NLPTS+
Sbjct: 548 FCIFTRNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWVGGGLLFRQKNLPTSSRGM 727
Query: 801 FMHWVQSTVKKAFVLYTKGGFHL 733
F +K F + +G L
Sbjct: 728 FFALGPMFREKRFPCFYRGWLSL 796
Score = 83.1 bits (175), Expect(3) = 5e-044
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +1 / -3
Query: 811 GTGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTEFPL 990
GTGR+I LSEQ*S P PYP K*QT L*YQ LQLQGAR +*AEH QSV G+ T++PL
Sbjct: 718 GTGRKIFLSEQ*SSPYPYPWDK*QTWL*YQLWLQLQGARLD*AEHSHPQSVAGKDTKYPL 539
Score = 68.9 bits (144), Expect(2) = 1e-031
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = -2 / +1
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 355 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 534
Query: 993 RQ 988
Q
Sbjct: 535 HQ 540
Score = 36.8 bits (74), Expect(3) = 8e-078
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 807 VCFMHWVQSTVKKAFVLYTKGGFH 736
VCF+HW + KK F +T+ GFH
Sbjct: 723 VCFLHWAPCSGKKGFRAFTEVGFH 794
Score = 26.7 bits (52), Expect(3) = 7e-058
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1 / -2
Query: 718 EQLRLQMEATLCIEHESLLHGRLYPVHETYHG 813
+QL M+A LC E+ G P+ +TY G
Sbjct: 812 DQLPSLMKANLCKSTETFFPGTWGPMQKTYPG 717
Score = 25.4 bits (49), Expect(3) = 5e-044
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2 / -3
Query: 740 KPPFV*STKAFFTVDCTQCMKHT 808
KP V + K FF QC KHT
Sbjct: 790 KPTSVKARKPFFPEHGAQCKKHT 722
Score = 25.4 bits (49), Expect(3) = 1e-050
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3 / -1
Query: 723 TPITDGSHPLYRARKPSSR*TVPSA*NIPR 812
TPI + S PL + SR P+A NIPR
Sbjct: 807 TPILNESQPL*KHGNLFSRNMGPNAKNIPR 718
>gb|BJ471924.1|BJ471924 BJ471924 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28i14 5', mRNA sequence
Length = 629
Score = 274 bits (593), Expect = 7e-073
Identities = 116/140 (82%), Positives = 123/140 (87%)
Frame = -1 / +3
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 210 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 389
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACA 899
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA A
Sbjct: 390 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATA 569
Query: 898 GIIAMSATYPMDMVRGRITV 839
GIIAMSATYPMDMVRGRITV
Sbjct: 570 GIIAMSATYPMDMVRGRITV 629
Score = 223 bits (482), Expect = 1e-057
Identities = 105/140 (75%), Positives = 111/140 (79%)
Frame = +3 / -2
Query: 840 TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHRIPFDACS*LKNFT 1019
TVILPLTIS+G*VAD+AMIPA APAPRRK G+S*A SSPVC R* ++IP DACS*LKNFT
Sbjct: 628 TVILPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFSSPVCCR*RYKIPLDACS*LKNFT 449
Query: 1020 AEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFNRSSGXXXXXX 1199
AEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S IFNRSSG
Sbjct: 448 AEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*SRIFNRSSGATAVLD 269
Query: 1200 XXXXXXXXXSDLQMVRIKWP 1259
DLQMVR WP
Sbjct: 268 RPPATPPAKRDLQMVRTWWP 209
Score = 199 bits (428), Expect = 4e-050
Identities = 81/136 (59%), Positives = 93/136 (68%)
Frame = -3 / +2
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 221 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 400
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
QW QLCKDC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS
Sbjct: 401 V*RQWNQLCKDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHS 580
Query: 887 YVCYLPDGYG*GKDHC 840
+VCYL GYG*G D+C
Sbjct: 581 HVCYLSHGYG*G*DYC 628
Score = 195 bits (421), Expect = 4e-049
Identities = 88/140 (62%), Positives = 108/140 (77%)
Frame = +2 / -1
Query: 839 NSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQNSL*RLLVAKKLH 1018
NS+P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL SLL V QN+ * LL+A++ H
Sbjct: 629 NSNPTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILIPSLLPVKIQNTP*CLLIAEEFH 450
Query: 1019 GRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSFKWSNSSTR 1198
RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ QS K SNSS R
Sbjct: 449 SRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQDLQSLKRSNSSPR 270
Query: 1199 HSACYAAGDERLADGEDKMA 1258
+ YA+G+E LADGED +A
Sbjct: 269 *ATGYASGEEGLADGEDLVA 210
Score = 171 bits (367), Expect = 1e-041
Identities = 83/139 (59%), Positives = 93/139 (66%)
Frame = +1 / -3
Query: 841 Q*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTEFPLTPARS*KTSR 1020
Q*S+P*PYP K*QT L*YQ LQLQGAR +*AEH QSV G+ T++PL A S*+ S+
Sbjct: 627 Q*SYP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSHPQSVAGKDTKYPLMLAHS*RISQ 448
Query: 1021 QNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAIFSIVQVEQQQYET 1200
QNL QSLH+W+HC * VH G FS YT* E+ HCT* C DFEPEA SI Q EQQQ
Sbjct: 447 QNLGQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEAGSSIAQAEQQQSSI 268
Query: 1201 XXXXXXXXXATCRW*G*NG 1257
TCRW*G G
Sbjct: 267 GHRLRLRRRGTCRW*GPGG 211
Score = 133 bits (285), Expect = 2e-030
Identities = 68/111 (61%), Positives = 77/111 (69%)
Frame = -2 / +1
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 295 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 474
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSL 841
Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWLG G L
Sbjct: 475 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWLGVGLL 627
>gb|AV918079.1|AV918079 AV918079 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17l12 3', mRNA sequence
Length = 636
Score = 263 bits (568), Expect(3) = 2e-072
Identities = 110/120 (91%), Positives = 115/120 (95%)
Frame = -1 / -1
Query: 667 LQTNSFGLANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQG 488
LQ+N+F LA DNELHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+G
Sbjct: 636 LQSNAFDLAKDNELHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEG 457
Query: 487 KEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
KEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 456 KEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 277
Score = 204 bits (439), Expect(3) = 3e-055
Identities = 90/119 (75%), Positives = 92/119 (77%)
Frame = +3 / +2
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 278 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 457
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEFVW 665
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F W
Sbjct: 458 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAFDW 634
Score = 186 bits (401), Expect(2) = 6e-048
Identities = 76/119 (63%), Positives = 88/119 (73%)
Frame = -3 / -3
Query: 665 PDKFIWPCK*QRAARSYKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQ 486
P K I CK Q AARS KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQ
Sbjct: 634 PVKCIRSCKGQ*AARSNKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQ 455
Query: 485 RSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDED 309
R TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H + +RG EGC+RSRDED
Sbjct: 454 RGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCSRSRDED 278
Score = 185 bits (399), Expect(2) = 3e-048
Identities = 79/126 (62%), Positives = 94/126 (74%)
Frame = +2 / +1
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 259 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 438
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICKA 649
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 439 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCKI 618
Query: 650 K*ICLE 667
+ I LE
Sbjct: 619 ECI*LE 636
Score = 157 bits (338), Expect(2) = 2e-039
Identities = 70/112 (62%), Positives = 81/112 (72%)
Frame = +1 / +3
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 300 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 479
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMNLSG 666
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+L+G
Sbjct: 480 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMHLTG 635
Score = 128 bits (274), Expect(2) = 3e-029
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -2
Query: 666 SRQIHLALQMTTSCT*LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKA 487
S Q+H LQ T SCT* QGL ELW EP RL HT LM SGE CRW G M L KA
Sbjct: 635 SSQMHSILQRTMSCT**QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKA 456
Query: 486 KKHSSTMA*SMHSGRLFVMKELVLSTRVLCRTQSRWC 376
K+HSSTM MHSG+LF K LVL TRVL TQ RWC
Sbjct: 455 KRHSSTMVWLMHSGKLFATKVLVLCTRVLFPTQ*RWC 345
Score = 27.6 bits (54), Expect(3) = 3e-055
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 153 MLNGASVLLSFYSPCLTKKGN 215
Score = 27.2 bits (53), Expect(2) = 3e-048
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 142 ERALC*MEPRSY 177
Score = 26.3 bits (51), Expect(3) = 2e-072
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 173 DRGSIQHKALS 141
Score = 25.8 bits (50), Expect(2) = 2e-039
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 143 RGPYAEWSLGPIVL 184
Score = 25.4 bits (49), Expect(2) = 6e-048
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 183 RTIGPRLHSA*GPL 142
Score = 23.5 bits (45), Expect(2) = 3e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 217 TAAPFSIRPS 188
T APFSIRPS
Sbjct: 172 TEAPFSIRPS 143
Score = 23.5 bits (45), Expect(3) = 3e-055
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +2
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 53 ALQPTYYF 76
Score = 23.1 bits (44), Expect(3) = 2e-072
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 215 VPFFC*AGRVEG 180
>gb|BF627171.2|BF627171 HVSMEb0004C05f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004C05f, mRNA sequence
Length = 760
Score = 272 bits (588), Expect = 3e-072
Identities = 117/153 (76%), Positives = 126/153 (82%)
Frame = -1 / +3
Query: 1249 ILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGLRG 1070
+LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGL G
Sbjct: 291 VLTICKSLFSGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEGLSG 470
Query: 1069 LFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACAGII 890
LFKGNGTNCA IVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA GII
Sbjct: 471 LFKGNGTNCAWIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATVGII 650
Query: 889 AMSATYPMDMVRGRITVQTDKSPYQYRGMFHAL 791
+MSATYPMDM GRITVQT+K Y Y GM AL
Sbjct: 651 SMSATYPMDMGWGRITVQTEKVFYHYAGMLSAL 749
Score = 214 bits (461), Expect = 1e-054
Identities = 105/149 (70%), Positives = 111/149 (74%)
Frame = +3 / -1
Query: 801 NIPRYW*GDLSV*TVILPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHR 980
NIP W* SV*TVILP IS+G*VAD+ MIP APAPRRK G+S*A SSPVC R* ++
Sbjct: 739 NIPA*W*KTFSV*TVILPQPISMG*VADMDMIPTVAPAPRRKIGLS*AFSSPVCCR*RYK 560
Query: 981 IPFDACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SN 1160
IP DACS*LKNFTAEFGTI AQLVPLPL SP RPSVL IYL P*TVPLYL+L GF*T*S
Sbjct: 559 IPLDACS*LKNFTAEFGTIHAQLVPLPLNSPLRPSVLHIYLSP*TVPLYLIL*GF*T*SR 380
Query: 1161 IFNRSSGXXXXXXXXXXXXXXXSDLQMVR 1247
IFNRSSG DLQMVR
Sbjct: 379 IFNRSSGATAVLDRPPATPPEKRDLQMVR 293
Score = 207 bits (446), Expect = 1e-052
Identities = 92/153 (60%), Positives = 114/153 (74%)
Frame = +2 / -3
Query: 803 HTTVLVGRFVCLNSDPSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQN 982
H V+V F+CLNS+P+P HIH +SSRH YDT+ SSSKAQ+ +KLSIL SLL V QN
Sbjct: 737 HPRVVVENFLCLNSNPTPTHIHGISSRHGYDTNCGSSSKAQDWTKLSILIPSLLPVKIQN 558
Query: 983 SL*RLLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQY 1162
+ * LL+A++ H RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ
Sbjct: 557 TP*CLLIAEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQD 378
Query: 1163 FQSFKWSNSSTRHSACYAAGDERLADGEDKMAP 1261
QS K SNSS R + YA+G+E LADGED P
Sbjct: 377 LQSLKRSNSSPR*ATGYASGEEGLADGEDSGGP 279
Score = 203 bits (437), Expect = 2e-051
Identities = 85/151 (56%), Positives = 99/151 (65%)
Frame = -3 / +2
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 293 PHHLQVPLLRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRP*WT 472
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
QW QLC DC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYH
Sbjct: 473 V*RQWNQLCMDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHI 652
Query: 887 YVCYLPDGYG*GKDHCSDRQISLPVPWYVSC 795
+VCYL GYG G D+CSDR+ LP+ V C
Sbjct: 653 HVCYLSHGYGLG*DYCSDRESFLPLRGDVIC 745
Score = 177 bits (381), Expect = 1e-043
Identities = 84/145 (57%), Positives = 99/145 (68%)
Frame = +1 / -2
Query: 814 TGREICLSEQ*SFP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTEFPLT 993
+GR++ LSEQ*S+P PYP K*QT +*YQ LQLQGAR +*AEH QSV G+ T++PL
Sbjct: 726 SGRKLSLSEQ*SYPNPYPWDK*QTWI*YQLWLQLQGARLD*AEHSHPQSVAGKDTKYPLM 547
Query: 994 PARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAIFSIV 1173
A S*+ S+QNL QS+H+W+HC * VH G FS YT* E+ HCT* C DFEPEA SI
Sbjct: 546 LAHS*RISQQNLGQSMHSWFHCL*TVH*GLRFSIYT*ALERCHCT*YCEDFEPEAGSSIA 367
Query: 1174 QVEQQQYETXXXXXXXXXATCRW*G 1248
Q EQQQ TCRW*G
Sbjct: 366 QAEQQQSSIGHRLRLRRRGTCRW*G 292
Score = 142 bits (305), Expect = 4e-033
Identities = 71/126 (56%), Positives = 84/126 (66%)
Frame = -2 / +1
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P V GL QIL *+ A S+
Sbjct: 367 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKALVDCLKAMEPTVHGLSQILL*NSSAMSK 546
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLGEGSLFRQTNLPTS 814
Q FC T NRL RMLSL++SCALELE LVS CLLL WIW+G G LFRQ T+
Sbjct: 547 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVSYPCLLLIPWIWVGVGLLFRQRKFSTT 726
Query: 813 TVVCFM 796
T C++
Sbjct: 727 TRGCYL 744
>gb|CA007132.1|CA007132 HU06O08r HU Hordeum vulgare subsp. vulgare cDNA clone HU06O08
5-PRIME, mRNA sequence
Length = 564
Score = 268 bits (580), Expect = 4e-071
Identities = 113/137 (82%), Positives = 120/137 (87%)
Frame = -1 / +1
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 154 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 333
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACA 899
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL+P+LRLGAGA A
Sbjct: 334 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLSPILRLGAGATA 513
Query: 898 GIIAMSATYPMDMVRGR 848
GIIAMSATYPMDMVRGR
Sbjct: 514 GIIAMSATYPMDMVRGR 564
Score = 217 bits (469), Expect = 9e-056
Identities = 102/137 (74%), Positives = 108/137 (78%)
Frame = +3 / -2
Query: 849 LPLTISIG*VADIAMIPAHAPAPRRKSGVS*ASSSPVC*R*AHRIPFDACS*LKNFTAEF 1028
LPLTIS+G*VAD+AMIPA APAPRRK G+S*A SSPVC R* ++IP DACS*LKNFTAEF
Sbjct: 563 LPLTISMG*VADMAMIPAVAPAPRRKIGLS*AFSSPVCCR*RYKIPLDACS*LKNFTAEF 384
Query: 1029 GTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFNRSSGXXXXXXXXX 1208
GTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S IFNRSSG
Sbjct: 383 GTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*SRIFNRSSGATAVLDRPP 204
Query: 1209 XXXXXXSDLQMVRIKWP 1259
DLQMVR WP
Sbjct: 203 ATPPAKRDLQMVRTWWP 153
Score = 193 bits (415), Expect = 2e-048
Identities = 79/132 (59%), Positives = 90/132 (68%)
Frame = -3 / +3
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 165 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 344
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYHS 888
QW QLCKDC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYHS
Sbjct: 345 V*RQWNQLCKDCPKFCCEILQL*ASIKGYFVSLPATDWG*ECSA*SNLAPWSWSHSWYHS 524
Query: 887 YVCYLPDGYG*G 852
+VCYL GYG*G
Sbjct: 525 HVCYLSHGYG*G 560
Score = 190 bits (410), Expect = 1e-047
Identities = 86/137 (62%), Positives = 105/137 (76%)
Frame = +2 / -1
Query: 848 PSPNHIHRVSSRHSYDTSTCSSSKAQERSKLSILFTSLLTVGPQNSL*RLLVAKKLHGRI 1027
P+PNHIH +SSRH YDTS SSSKAQ+ +KLSIL SLL V QN+ * LL+A++ H RI
Sbjct: 564 PTPNHIHGISSRHGYDTSCGSSSKAQDWTKLSILIPSLLPVKIQNTP*CLLIAEEFHSRI 385
Query: 1028 WNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSFKWSNSSTRHSA 1207
W+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ QS K SNSS R +
Sbjct: 384 WDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQDLQSLKRSNSSPR*AT 205
Query: 1208 CYAAGDERLADGEDKMA 1258
YA+G+E LADGED +A
Sbjct: 204 GYASGEEGLADGEDLVA 154
Score = 166 bits (357), Expect = 2e-040
Identities = 80/136 (58%), Positives = 90/136 (66%)
Frame = +1 / -3
Query: 850 FP*PYPSGK*QT*L*YQHMLQLQGARAE*AEHPLHQSVDGRPTEFPLTPARS*KTSRQNL 1029
+P*PYP K*QT L*YQ LQLQGAR +*AEH QSV G+ T++PL A S*+ S+QNL
Sbjct: 562 YP*PYPWDK*QTWL*YQLWLQLQGARLD*AEHSHPQSVAGKDTKYPLMLAHS*RISQQNL 383
Query: 1030 EQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAIFSIVQVEQQQYETXXX 1209
QSLH+W+HC * VH G FS YT* E+ HCT* C DFEPEA SI Q EQQQ
Sbjct: 382 GQSLHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEAGSSIAQAEQQQSSIGHR 203
Query: 1210 XXXXXXATCRW*G*NG 1257
TCRW*G G
Sbjct: 202 LRLRRRGTCRW*GPGG 155
Score = 130 bits (279), Expect = 1e-029
Identities = 66/107 (61%), Positives = 75/107 (70%)
Frame = -2 / +2
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE +A VD +AM P VQGL QIL *+ A S+
Sbjct: 239 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPKAFVDCLKAMEPTVQGLSQILL*NSSAMSK 418
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS*LCLLLTRWIWLG 853
Q FC T NRL RMLSL++SCALELE LVS* CLLL WIWLG
Sbjct: 419 HQGVFCIFTGNRLGMRMLSLVQSCALELEPQLVS*PCLLLIPWIWLG 559
>gb|AV935159.1|AV935159 AV935159 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3b19 3', mRNA sequence
Length = 636
Score = 258 bits (558), Expect(3) = 5e-071
Identities = 108/117 (92%), Positives = 112/117 (95%)
Frame = -1 / -3
Query: 658 NSFGLANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEA 479
N+F LA DNELHVVTRLGCGAVAGTIGQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEA
Sbjct: 625 NAFDLAKDNELHVVTRLGCGAVAGTIGQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEA 446
Query: 478 LQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
LQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 445 LQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 275
Score = 200 bits (431), Expect(3) = 3e-054
Identities = 89/117 (76%), Positives = 91/117 (77%)
Frame = +3 / +3
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 276 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 455
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATVWPMVPATAPHPSLVTTCSSLSFARPNEF 659
P PVTIE+A LQPTICILLL TS GYATV PMVPATAPHPSLVTTCSSLSFAR N F
Sbjct: 456 PSPVTIEAA*LQPTICILLLTTSRGYATVCPMVPATAPHPSLVTTCSSLSFARSNAF 626
Score = 184 bits (397), Expect(2) = 2e-047
Identities = 75/117 (64%), Positives = 87/117 (74%)
Frame = -3 / -2
Query: 659 KFIWPCK*QRAARSYKAWVWSCGGNHWPDCCIPA*CHQEKNADGWLEPC*LYCYWARQRS 480
K I CK Q AARS KAW+ SCG NH DC IP+*C QEK+ADG LE C YCYW RQR
Sbjct: 626 KCIRSCKGQ*AARSNKAWMRSCGWNHRADCGIPS*CCQEKDADGRLESCCFYCYWRRQRG 447
Query: 479 TPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDED 309
TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H + +RG EGC+RSRDED
Sbjct: 446 TPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCSRSRDED 276
Score = 183 bits (394), Expect(2) = 2e-047
Identities = 76/119 (63%), Positives = 90/119 (75%)
Frame = +2 / +2
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 257 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 436
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSLANGSRHSSTPKPCNYVQLVVICK 646
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL GS HSS KPC YVQL+V+CK
Sbjct: 437 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSLPYGSSHSSASKPCYYVQLIVLCK 613
Score = 152 bits (327), Expect(2) = 6e-038
Identities = 68/109 (62%), Positives = 78/109 (71%)
Frame = +1 / +1
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 298 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 477
Query: 511 QHGSNQPSAFFS**HQAGMQQSGQWFPPQLHTQAL*LRAARCHLQGQMN 657
QH S++PSA FS* HQ GM QS WF PQL QAL LRAA C LQ +M+
Sbjct: 478 QHDSSRPSASFS*QHQEGMPQSALWFQPQLRIQALLLRAAHCPLQDRMH 624
Score = 125 bits (267), Expect(2) = 3e-028
Identities = 58/95 (61%), Positives = 62/95 (65%)
Frame = -2 / -1
Query: 660 QIHLALQMTTSCT*LQGLGVELWREPLARLLHTRLMSSGEECRWLVGAMXXXXXLGKAKK 481
++H LQ T SCT* QGL ELW EP RL HT LM SGE CRW G M L KAK+
Sbjct: 627 KMHSILQRTMSCT**QGLDAELWLEP*GRLWHTLLMLSGEGCRWSAGVMLLLLLLEKAKR 448
Query: 480 HSSTMA*SMHSGRLFVMKELVLSTRVLCRTQSRWC 376
HSSTM MHSG+LF K LVL TRVL TQ RWC
Sbjct: 447 HSSTMVWLMHSGKLFATKVLVLCTRVLFPTQ*RWC 343
Score = 27.6 bits (54), Expect(3) = 3e-054
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +1
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 151 MLNGASVLLSFYSPCLTKKGN 213
Score = 27.2 bits (53), Expect(2) = 2e-047
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 140 ERALC*MEPRSY 175
Score = 26.3 bits (51), Expect(3) = 5e-071
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 171 DRGSIQHKALS 139
Score = 25.8 bits (50), Expect(2) = 6e-038
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 141 RGPYAEWSLGPIVL 182
Score = 25.4 bits (49), Expect(2) = 2e-047
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 181 RTIGPRLHSA*GPL 140
Score = 23.5 bits (45), Expect(2) = 3e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 217 TAAPFSIRPS 188
T APFSIRPS
Sbjct: 170 TEAPFSIRPS 141
Score = 23.5 bits (45), Expect(3) = 3e-054
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +3
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 51 ALQPTYYF 74
Score = 23.1 bits (44), Expect(3) = 5e-071
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 213 VPFFC*AGRVEG 178
>gb|BI959937.1|BI959937 HVSMEn0022H15f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022H15f,
mRNA sequence
Length = 666
Score = 226 bits (488), Expect = 2e-058
Identities = 96/124 (77%), Positives = 103/124 (83%)
Frame = -1 / +2
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRT
Sbjct: 269 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTXS 448
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAYRQQTGEEDAQLTPLLRLGAGACA 899
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS+GIL+ YRQQTG+E+AQL P+LRLGAGA
Sbjct: 449 LRGLFKGNGTNCARIVPNSAVKFFSYEQASRGILYLYRQQTGDENAQLYPILRLGAGAHT 628
Query: 898 GIIA 887
GII+
Sbjct: 629 GIIS 640
Score = 184 bits (396), Expect = 1e-045
Identities = 88/123 (71%), Positives = 91/123 (73%)
Frame = +3 / -1
Query: 891 MIPAHAPAPRRKSGVS*ASSSPVC*R*AHRIPFDACS*LKNFTAEFGTILAQLVPLPLKS 1070
MIP APAPRRK G S*A SSPVC R* ++IP DACS*LKNFTAEFGTILAQLVPLPL S
Sbjct: 636 MIPVWAPAPRRKIG*S*AFSSPVCCR*RYKIPLDACS*LKNFTAEFGTILAQLVPLPLNS 457
Query: 1071 PRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFNRSSGXXXXXXXXXXXXXXXSDLQMVRI 1250
PRR SVL IYL P*TVPLYL+L GF*T*S IFNRSSG DLQMVR
Sbjct: 456 PRRLSVLHIYLSP*TVPLYLIL*GF*T*SRIFNRSSGATAVLDRPPATPPAKRDLQMVRT 277
Query: 1251 KWP 1259
WP
Sbjct: 276 WWP 268
Score = 169 bits (363), Expect = 4e-041
Identities = 69/119 (57%), Positives = 79/119 (66%)
Frame = -3 / +1
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 280 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRXPSWT 459
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVKGNSVGLPSTDW*RGCSAYSALAPWSWSMCWYH 891
QW QLCKDC KFC E+ L A +KG V LP+TDW CSA S LAPWSWS WYH
Sbjct: 460 V*RQWNQLCKDCPKFCCEILQL*ASIKGYFVSLPATDWG*KCSALSNLAPWSWSPHWYH 636
Score = 155 bits (333), Expect = 5e-037
Identities = 74/122 (60%), Positives = 90/122 (73%)
Frame = +2 / -3
Query: 893 DTSTCSSSKAQERSKLSILFTSLLTVGPQNSL*RLLVAKKLHGRIWNNPCTIGTIALEKS 1072
DTS SSSKAQ+ KLSI SLL V QN+ * LL+A++ H RIW+NPCT+G+IA ++S
Sbjct: 634 DTSVGSSSKAQDWIKLSIFIPSLLPVKIQNTP*CLLIAEEFHSRIWDNPCTVGSIAFKQS 455
Query: 1073 TEALCSPDILETLNSTIVLDAVRILNLKQYFQSFKWSNSSTRHSACYAAGDERLADGEDK 1252
T+A SP IL+ LN IVLD VRILNLKQ QS K SNSS R + YA+G+E LADGED
Sbjct: 454 TKAXGSPYILKPLNGAIVLDTVRILNLKQDLQSLKRSNSSPR*ATGYASGEEGLADGEDL 275
Query: 1253 MA 1258
+A
Sbjct: 274 VA 269
Score = 142 bits (304), Expect = 5e-033
Identities = 69/122 (56%), Positives = 78/122 (63%)
Frame = +1 / -2
Query: 892 *YQHMLQLQGARAE*AEHPLHQSVDGRPTEFPLTPARS*KTSRQNLEQSLHNWYHCP*KV 1071
*YQ LQLQGAR + AEH QSV G+ T++PL A S*+ S+QNL QSLH+W+HC * V
Sbjct: 635 *YQCGLQLQGARLDKAEHFHPQSVAGKDTKYPLMLAHS*RISQQNLGQSLHSWFHCL*TV 456
Query: 1072 HGGPLFSRYT*DPEQYHCT*CCADFEPEAIFSIVQVEQQQYETXXXXXXXXXATCRW*G* 1251
H G FS YT* E+ HCT* C DFEPEA SI Q EQQQ TCRW*G
Sbjct: 455 HEGXRFSIYT*ALERCHCT*YCEDFEPEAGSSIAQAEQQQSSIGHRLRLRRRGTCRW*GP 276
Query: 1252 NG 1257
G
Sbjct: 275 GG 270
Score = 103 bits (220), Expect = 2e-021
Identities = 54/94 (57%), Positives = 63/94 (67%)
Frame = -2 / +3
Query: 1173 ND*KYCFRFKIRTASSTMVLFRVSSISGEQRASVDFSRAMVPIVQGLFQILP*SFLATSR 994
+D*+ CFRFKI T SSTM F+ SI GE A VD +AM P VQGL QIL *+ A S+
Sbjct: 354 SD*RSCFRFKILTVSSTMAPFKGLSIYGEPXAFVDCLKAMEPTVQGLSQILL*NSSAMSK 533
Query: 993 RQREFCGPTVNRLVKRMLSLLRSCALELEHVLVS 892
Q FC T NRL +MLS ++SCALELE LVS
Sbjct: 534 HQGVFCIFTGNRLGMKMLSFIQSCALELEPTLVS 635
>gb|AV921215.1|AV921215 AV921215 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1h01 3', mRNA sequence
Length = 545
Score = 204 bits (439), Expect(3) = 9e-055
Identities = 85/91 (93%), Positives = 88/91 (96%)
Frame = -1 / -1
Query: 580 GQTVAYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGL 401
GQTVAYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGL
Sbjct: 545 GQTVAYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGL 366
Query: 400 VPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
VPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 365 VPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 273
Score = 150 bits (323), Expect(2) = 3e-037
Identities = 58/89 (65%), Positives = 69/89 (77%)
Frame = -3 / -3
Query: 575 DCCIPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCA 396
DC IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC+
Sbjct: 540 DCGIPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCS 361
Query: 395 ELSQGGALNCHCICDLRGCEGCARSRDED 309
+LS+GGA H + +RG EGC+RSRDED
Sbjct: 360 QLSEGGAFYRHRVRHVRGREGCSRSRDED 274
Score = 145 bits (311), Expect(3) = 6e-038
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +2 / +3
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 255 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 434
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCNSL 577
VLEC FA SNNR SM P +HLH SPD+IKRVC+SL
Sbjct: 435 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCHSL 542
Score = 141 bits (303), Expect(2) = 4e-035
Identities = 64/89 (71%), Positives = 66/89 (74%)
Frame = +3 / +1
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 274 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 453
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYATV 575
P PVTIE+A LQPTICILLL TS GYATV
Sbjct: 454 PSPVTIEAA*LQPTICILLLTTSRGYATV 540
Score = 117 bits (250), Expect(2) = 2e-027
Identities = 52/82 (63%), Positives = 60/82 (73%)
Frame = +1 / +2
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 296 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 475
Query: 511 QHGSNQPSAFFS**HQAGMQQS 576
QH S++PSA FS* HQ GM QS
Sbjct: 476 QHDSSRPSASFS*QHQEGMPQS 541
Score = 27.6 bits (54), Expect(3) = 6e-038
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 149 MLNGASVLLSFYSPCLTKKGN 211
Score = 27.2 bits (53), Expect(2) = 4e-035
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 138 ERALC*MEPRSY 173
Score = 26.3 bits (51), Expect(3) = 9e-055
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 169 DRGSIQHKALS 137
Score = 25.8 bits (50), Expect(2) = 2e-027
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 139 RGPYAEWSLGPIVL 180
Score = 25.4 bits (49), Expect(2) = 3e-037
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 179 RTIGPRLHSA*GPL 138
Score = 23.5 bits (45), Expect(3) = 6e-038
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +1
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 49 ALQPTYYF 72
Score = 23.1 bits (44), Expect(3) = 9e-055
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 211 VPFFC*AGRVEG 176
>gb|CB877416.1|CB877416 HP04N04T HP Hordeum vulgare subsp. vulgare cDNA clone HP04N04
5-PRIME, mRNA sequence
Length = 592
Score = 194 bits (419), Expect(3) = 5e-052
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = -1 / +2
Query: 568 AYPLDVIRRRMQMVGWSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNS 389
AYPLDV+RRRMQMVGWSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNS
Sbjct: 11 AYPLDVVRRRMQMVGWSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNS 190
Query: 388 VKVVPSIAIAFVTYEVVKDVLGVEMRI 308
VKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 191 VKVVPSIAIAFVTYEAVKDVLGVEMRI 271
Score = 145 bits (311), Expect(2) = 1e-035
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = -3 / +1
Query: 566 IPA*CHQEKNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELS 387
IP+*C QEK+ADG LE C YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC++LS
Sbjct: 13 IPS*CCQEKDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLS 192
Query: 386 QGGALNCHCICDLRGCEGCARSRDED 309
+GGA H + +RG EGC+RSRDED
Sbjct: 193 EGGAFYRHRVRHVRGREGCSRSRDED 270
Score = 141 bits (303), Expect(3) = 7e-037
Identities = 59/94 (62%), Positives = 71/94 (75%)
Frame = +2 / -1
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 289 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 110
Query: 470 VLECFFALPSNNRVSMAPTNHLHSSPDDIKRVCN 571
VLEC FA SNNR SM P +HLH SPD+IKRVC+
Sbjct: 109 VLECLFAFSSNNRSSMTPADHLHPSPDNIKRVCS 8
Score = 137 bits (294), Expect(2) = 7e-034
Identities = 62/87 (71%), Positives = 64/87 (73%)
Frame = +3 / -2
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 270 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 91
Query: 489 PCPVTIESAWLQPTICILLLMTSSGYA 569
P PVTIE+A LQPTICILLL TS GYA
Sbjct: 90 PSPVTIEAA*LQPTICILLLTTSRGYA 10
Score = 113 bits (242), Expect(2) = 2e-026
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = +1 / -3
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 248 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 69
Query: 511 QHGSNQPSAFFS**HQAGM 567
QH S++PSA FS* HQ GM
Sbjct: 68 QHDSSRPSASFS*QHQEGM 12
Score = 27.6 bits (54), Expect(3) = 7e-037
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / -3
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 395 MLNGASVLLSFYSPCLTKKGN 333
Score = 27.2 bits (53), Expect(2) = 7e-034
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 406 ERALC*MEPRSY 371
Score = 26.3 bits (51), Expect(3) = 5e-052
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 375 DRGSIQHKALS 407
Score = 25.8 bits (50), Expect(2) = 2e-026
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 405 RGPYAEWSLGPIVL 364
Score = 25.4 bits (49), Expect(2) = 1e-035
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 365 RTIGPRLHSA*GPL 406
Score = 23.5 bits (45), Expect(3) = 7e-037
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -2
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 495 ALQPTYYF 472
Score = 23.1 bits (44), Expect(3) = 5e-052
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 333 VPFFC*AGRVEG 368
>gb|CB876437.1|CB876437 HX11E11w HX Hordeum vulgare subsp. vulgare cDNA clone HX11E11
3-PRIME, mRNA sequence
Length = 570
Score = 176 bits (379), Expect(3) = 1e-046
Identities = 74/79 (93%), Positives = 76/79 (96%)
Frame = -1 / -1
Query: 544 RRMQMVGWSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIA 365
RRMQMVGWSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIA
Sbjct: 570 RRMQMVGWSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIA 391
Query: 364 IAFVTYEVVKDVLGVEMRI 308
IAFVTYE VKDVLGVEMRI
Sbjct: 390 IAFVTYEAVKDVLGVEMRI 334
Score = 132 bits (282), Expect(2) = 1e-031
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -3 / -3
Query: 542 KNADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCH 363
K+ADG LE C YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H
Sbjct: 568 KDADGRLESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRH 389
Query: 362 CICDLRGCEGCARSRDED 309
+ +RG EGC+RSRDED
Sbjct: 388 RVRHVRGREGCSRSRDED 335
Score = 122 bits (262), Expect(3) = 3e-031
Identities = 55/78 (70%), Positives = 57/78 (73%)
Frame = +3 / +2
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 335 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 514
Query: 489 PCPVTIESAWLQPTICIL 542
P PVTIE+A LQPTICIL
Sbjct: 515 PSPVTIEAA*LQPTICIL 568
Score = 122 bits (261), Expect(2) = 2e-029
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +2 / +1
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 316 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 495
Query: 470 VLECFFALPSNNRVSMAPTNHLHSS 544
VLEC FA SNNR SM P +HLH S
Sbjct: 496 VLECLFAFSSNNRSSMTPADHLHPS 570
Score = 102 bits (218), Expect(2) = 4e-023
Identities = 44/71 (61%), Positives = 52/71 (73%)
Frame = +1 / +3
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 357 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 536
Query: 511 QHGSNQPSAFF 543
QH S++PSA F
Sbjct: 537 QHDSSRPSASF 569
Score = 27.6 bits (54), Expect(3) = 3e-031
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 210 MLNGASVLLSFYSPCLTKKGN 272
Score = 27.2 bits (53), Expect(2) = 2e-029
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 199 ERALC*MEPRSY 234
Score = 26.3 bits (51), Expect(3) = 1e-046
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 230 DRGSIQHKALS 198
Score = 25.8 bits (50), Expect(2) = 4e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 188 RGPDAEWSRGHILL 229
RGP AEWS G I+L
Sbjct: 200 RGPYAEWSLGPIVL 241
Score = 25.4 bits (49), Expect(2) = 1e-031
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 240 RTIGPRLHSA*GPL 199
Score = 23.5 bits (45), Expect(3) = 3e-031
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +2
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 110 ALQPTYYF 133
Score = 23.1 bits (44), Expect(3) = 1e-046
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 272 VPFFC*AGRVEG 237
>gb|BM098135.2|BM098135 EBpi03_SQ002_K11_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_K11 5', mRNA sequence
Length = 536
Score = 175 bits (377), Expect = 4e-043
Identities = 74/90 (82%), Positives = 75/90 (83%)
Frame = -1 / +1
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 265 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 444
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFSYEQAS 989
LRGLFKGNGTNCARIVPNSAVKFFSYEQAS
Sbjct: 445 LRGLFKGNGTNCARIVPNSAVKFFSYEQAS 534
Score = 142 bits (304), Expect = 5e-033
Identities = 66/90 (73%), Positives = 67/90 (74%)
Frame = +3 / -1
Query: 990 DACS*LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFN 1169
DACS*LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S IFN
Sbjct: 533 DACS*LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*SRIFN 354
Query: 1170 RSSGXXXXXXXXXXXXXXXSDLQMVRIKWP 1259
RSSG DLQMVR WP
Sbjct: 353 RSSGATAVLDRPPATPPAKRDLQMVRTWWP 264
Score = 119 bits (254), Expect = 4e-026
Identities = 53/88 (60%), Positives = 67/88 (76%)
Frame = +2 / -3
Query: 995 LLVAKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSF 1174
LL+A++ H RIW+NP T+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ QS
Sbjct: 528 LLIAEEFHSRIWDNPGTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQDLQSL 349
Query: 1175 KWSNSSTRHSACYAAGDERLADGEDKMA 1258
K SNSS R + YA+G+E LADGED +A
Sbjct: 348 KRSNSSPR*ATGYASGEEGLADGEDLVA 265
Score = 114 bits (244), Expect = 9e-025
Identities = 47/87 (54%), Positives = 57/87 (65%)
Frame = -3 / +3
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 276 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 455
Query: 1067 FQGQWYQLCKDCSKFCREVF*LRAGVK 987
QW QLC+DC KFC E+ L A +K
Sbjct: 456 V*RQWNQLCQDCPKFCCEILQL*ASIK 536
Score = 102 bits (218), Expect = 4e-021
Identities = 48/87 (55%), Positives = 53/87 (60%)
Frame = +1 / -2
Query: 997 ARS*KTSRQNLEQSLHNWYHCP*KVHGGPLFSRYT*DPEQYHCT*CCADFEPEAIFSIVQ 1176
A S*+ S+QNL QS H+W+HC * VH G FS YT* E+ HCT* C DFEPEA SI Q
Sbjct: 526 AHS*RISQQNLGQSWHSWFHCL*TVHEGLRFSIYT*ALERCHCT*YCEDFEPEAGSSIAQ 347
Query: 1177 VEQQQYETXXXXXXXXXATCRW*G*NG 1257
EQQQ TCRW*G G
Sbjct: 346 AEQQQSSIGHRLRLRRRGTCRW*GPGG 266
>gb|AJ433770.1|AJ433770 AJ433770 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200019G11F1, mRNA sequence
Length = 406
Score = 169 bits (364), Expect(2) = 2e-042
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = -1 / +1
Query: 535 QMVGWSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAF 356
QMVGWSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAF
Sbjct: 4 QMVGWSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAF 183
Query: 355 VTYEVVKDVLGVEMRI 308
VTYE VKDVLGVEMRI
Sbjct: 184 VTYEAVKDVLGVEMRI 231
Score = 129 bits (276), Expect(2) = 7e-030
Identities = 49/76 (64%), Positives = 58/76 (76%)
Frame = -3 / +3
Query: 536 ADGWLEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCI 357
ADG LE C YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H +
Sbjct: 3 ADGRLESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRV 182
Query: 356 CDLRGCEGCARSRDED 309
+RG EGC+RSRDED
Sbjct: 183 RHVRGREGCSRSRDED 230
Score = 119 bits (254), Expect(3) = 6e-030
Identities = 53/76 (69%), Positives = 55/76 (72%)
Frame = +3 / -3
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 230 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 51
Query: 489 PCPVTIESAWLQPTIC 536
P PVTIE+A LQPTIC
Sbjct: 50 PSPVTIEAA*LQPTIC 3
Score = 117 bits (250), Expect(2) = 2e-026
Identities = 50/82 (60%), Positives = 60/82 (73%)
Frame = +2 / -2
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 249 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 70
Query: 470 VLECFFALPSNNRVSMAPTNHL 535
VLEC FA SNNR SM P +HL
Sbjct: 69 VLECLFAFSSNNRSSMTPADHL 4
Score = 100 bits (214), Expect(2) = 2e-021
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = +1 / -1
Query: 331 HPSQPRKSQMQWQLRAPP*LSSAQDPCREHQLLHDEQSS*MHRSCHCTGVLLCLAQ*Q*S 510
HPS+PR + +W+ +APP LS QDPC EHQ L EQ S*MH+ HCTGV LCL Q*Q*
Sbjct: 208 HPSRPRT*RTRWR*KAPPSLSWEQDPCTEHQNLRGEQFS*MHQPYHCTGVPLCLLQ*Q*K 29
Query: 511 QHGSNQPSA 537
QH S++PSA
Sbjct: 28 QHDSSRPSA 2
Score = 27.2 bits (53), Expect(3) = 6e-030
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 210 AAVISFYPPCLQKKHN 257
+ ++SFY PCL KK N
Sbjct: 340 SVLLSFYSPCLTKKGN 293
Score = 24.0 bits (46), Expect(2) = 2e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 218 DRGSIQHQALS 186
DRGSI H+ALS
Sbjct: 335 DRGSIHHKALS 367
Score = 23.1 bits (44), Expect(3) = 6e-030
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 189 EGLMLNGAAVI 221
EGLM+NGA+V+
Sbjct: 364 EGLMVNGASVL 332
Score = 22.6 bits (43), Expect(2) = 2e-026
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / -3
Query: 188 RGPDAEWSRGHILL 229
RGP EWS G I++
Sbjct: 365 RGPYGEWSLGPIVV 324
Score = 22.1 bits (42), Expect(2) = 7e-030
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 217 TAAPFSIRPS 188
T APF+IRPS
Sbjct: 336 TEAPFTIRPS 365
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 187 ERA*C*MEPRSY 222
ERA *MEPRSY
Sbjct: 366 ERALW*MEPRSY 331
>gb|BE437793.1|BE437793 SFR007.E11F990621 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 553
Score = 160 bits (344), Expect(3) = 7e-042
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = -1 / +3
Query: 523 WSHADSIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYE 344
WSHA SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE
Sbjct: 3 WSHAASIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE 182
Query: 343 VVKDVLGVEMRI 308
VKDVLGVEMRI
Sbjct: 183 AVKDVLGVEMRI 218
Score = 123 bits (263), Expect(2) = 4e-029
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = -3 / +2
Query: 524 LEPC*LYCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLR 345
LE C YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H + +R
Sbjct: 2 LESCCFYCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVR 181
Query: 344 GCEGCARSRDED 309
G EGC+RSRDED
Sbjct: 182 GREGCSRSRDED 217
Score = 111 bits (237), Expect(3) = 6e-028
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +2 / -3
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 236 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 57
Query: 470 VLECFFALPSNNRVSMAP 523
VLEC FA SNNR SM P
Sbjct: 56 VLECLFAFSSNNRSSMTP 3
Score = 107 bits (229), Expect(2) = 4e-025
Identities = 49/72 (68%), Positives = 51/72 (70%)
Frame = +3 / -1
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 217 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 38
Query: 489 PCPVTIESAWLQ 524
P PVTIE+A LQ
Sbjct: 37 PSPVTIEAA*LQ 2
Score = 27.6 bits (54), Expect(2) = 4e-025
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 342 MLNGASVLLSFYSPCLTKKGN 280
Score = 27.6 bits (54), Expect(3) = 6e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 181 KPERA*C*MEPRSY 222
+ ERA C*MEPRSY
Sbjct: 359 RAERALC*MEPRSY 318
Score = 26.3 bits (51), Expect(3) = 7e-042
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 322 DRGSIQHKALS 354
Score = 25.4 bits (49), Expect(2) = 4e-029
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 312 RTIGPRLHSA*GPL 353
Score = 23.5 bits (45), Expect(3) = 6e-028
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -1
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 442 ALQPTYYF 419
Score = 23.1 bits (44), Expect(3) = 7e-042
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 280 VPFFC*AGRVEG 315
>gb|CA010692.1|CA010692 HT08O24u HT Hordeum vulgare subsp. vulgare cDNA clone HT08O24
3-PRIME, mRNA sequence
Length = 545
Score = 149 bits (319), Expect(3) = 2e-038
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = -1 / -3
Query: 508 SIVTGQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDV 329
SIVTG+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDV
Sbjct: 540 SIVTGEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDV 361
Query: 328 LGVEMRI 308
LGVEMRI
Sbjct: 360 LGVEMRI 340
Score = 117 bits (250), Expect(2) = 3e-027
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = -3 / -2
Query: 506 YCYWARQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCA 327
YCYW RQR TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H + +RG EGC+
Sbjct: 538 YCYWRRQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCS 359
Query: 326 RSRDED 309
RSRDED
Sbjct: 358 RSRDED 341
Score = 105 bits (223), Expect(3) = 5e-026
Identities = 45/73 (61%), Positives = 54/73 (73%)
Frame = +2 / +1
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS*+ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 322 RSDSSVYPHLYS*NILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 501
Query: 470 VLECFFALPSNNR 508
VLEC FA SNNR
Sbjct: 502 VLECLFAFSSNNR 540
Score = 103 bits (220), Expect(2) = 9e-024
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = +3 / +2
Query: 309 ILIXXXXXXXXXXXXXNAMAIEGTTLTEFGTRPL*RAPTPS*RTVFLNASIMPLYWSASL 488
ILI NAMAIEGTT TE GTRPL RAP PS RTVFLNAS +PLYWSASL
Sbjct: 341 ILISTPRTSFTASYVTNAMAIEGTTFTELGTRPLYRAPKPSWRTVFLNASTIPLYWSASL 520
Query: 489 PCPVTIES 512
P PVTIE+
Sbjct: 521 PSPVTIEA 544
Score = 27.6 bits (54), Expect(3) = 5e-026
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 216 MLNGASVLLSFYSPCLTKKGN 278
Score = 27.2 bits (53), Expect(2) = 9e-024
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 187 ERA*C*MEPRSY 222
ERA C*MEPRSY
Sbjct: 205 ERALC*MEPRSY 240
Score = 26.3 bits (51), Expect(3) = 2e-038
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 236 DRGSIQHKALS 204
Score = 25.4 bits (49), Expect(2) = 3e-027
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 246 RTIGPRLHSA*GPL 205
Score = 23.5 bits (45), Expect(3) = 5e-026
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +2
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 116 ALQPTYYF 139
Score = 23.1 bits (44), Expect(3) = 2e-038
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 278 VPFFC*AGRVEG 243
>gb|AL504150.1|AL504150 AL504150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F15V 5', mRNA sequence
Length = 327
Score = 156 bits (336), Expect = 2e-037
Identities = 66/85 (77%), Positives = 67/85 (78%)
Frame = -1 / +3
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL AP RLKILLQVQNPHSIKYNGT QGLKYIWRTEG
Sbjct: 72 GHQVLTICKSLFAGGVAGGLSRTAVAPXXRLKILLQVQNPHSIKYNGTXQGLKYIWRTEG 251
Query: 1078 LRGLFKGNGTNCARIVPNSAVKFFS 1004
LRGLFKGNGTNCARIVPNSAVKFFS
Sbjct: 252 LRGLFKGNGTNCARIVPNSAVKFFS 326
Score = 127 bits (271), Expect = 2e-028
Identities = 59/85 (69%), Positives = 60/85 (70%)
Frame = +3 / -3
Query: 1005 LKNFTAEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFNRSSGX 1184
LKNFTAEFGTILAQLVPLPL SPRRPSVL IYL P* VPLYL+L GF*T*S IFNRS G
Sbjct: 325 LKNFTAEFGTILAQLVPLPLNSPRRPSVLHIYLSP*XVPLYLIL*GF*T*SRIFNRSXGA 146
Query: 1185 XXXXXXXXXXXXXXSDLQMVRIKWP 1259
DLQMVR WP
Sbjct: 145 TAVLDRPPATPPAKRDLQMVRTWWP 71
Score = 113 bits (241), Expect = 2e-024
Identities = 50/85 (58%), Positives = 63/85 (74%)
Frame = +2 / -2
Query: 1004 AKKLHGRIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSFKWS 1183
A++ H RIW+NPCT+G+IA ++ST+A SP IL+ L IVLD VRILNLKQ QS S
Sbjct: 326 AEEFHSRIWDNPCTVGSIAFKQSTKAFGSPYILKPLXGAIVLDTVRILNLKQDLQSXXRS 147
Query: 1184 NSSTRHSACYAAGDERLADGEDKMA 1258
NSS R + YA+G+E LADGED +A
Sbjct: 146 NSSPR*ATGYASGEEGLADGEDLVA 72
Score = 112 bits (240), Expect = 3e-024
Identities = 45/79 (56%), Positives = 53/79 (67%)
Frame = -3 / +2
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 83 PHHLQVPLRRRRSRWPIEDCCCSX*XIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 262
Query: 1067 FQGQWYQLCKDCSKFCREV 1011
QW QLCKDC KFC E+
Sbjct: 263 V*RQWNQLCKDCPKFCCEI 319
>gb|CA007336.1|CA007336 HU07J19r HU Hordeum vulgare subsp. vulgare cDNA clone HU07J19
5-PRIME, mRNA sequence
Length = 473
Score = 150 bits (323), Expect = 1e-035
Identities = 63/79 (79%), Positives = 64/79 (81%)
Frame = -1 / +1
Query: 1258 GHFILTICKSLXXXXXXXXXXXXXXAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 1079
GH +LTICKSL APLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG
Sbjct: 235 GHQVLTICKSLFAGGVAGGLSRTAVAPLERLKILLQVQNPHSIKYNGTVQGLKYIWRTEG 414
Query: 1078 LRGLFKGNGTNCARIVPNS 1022
LRGLFKGNGTNCARIVPNS
Sbjct: 415 LRGLFKGNGTNCARIVPNS 471
Score = 119 bits (254), Expect = 4e-026
Identities = 56/80 (70%), Positives = 57/80 (71%)
Frame = +3 / -1
Query: 1020 AEFGTILAQLVPLPLKSPRRPSVLQIYLRP*TVPLYLMLCGF*T*SNIFNRSSGXXXXXX 1199
AEFGTILAQLVPLPL SPRRPSVL IYL P*TVPLYL+L GF*T*S IFNRSSG
Sbjct: 473 AEFGTILAQLVPLPLNSPRRPSVLHIYLSP*TVPLYLIL*GF*T*SRIFNRSSGATAVLD 294
Query: 1200 XXXXXXXXXSDLQMVRIKWP 1259
DLQMVR WP
Sbjct: 293 RPPATPPAKRDLQMVRTWWP 234
Score = 113 bits (241), Expect = 2e-024
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 1022 RIWNNPCTIGTIALEKSTEALCSPDILETLNSTIVLDAVRILNLKQYFQSFKWSNSSTRH 1201
RIW+NPCT+G+IA ++ST+A SP IL+ LN IVLD VRILNLKQ QS K SNSS R
Sbjct: 471 RIWDNPCTVGSIAFKQSTKAFGSPYILKPLNGAIVLDTVRILNLKQDLQSLKRSNSSPR* 292
Query: 1202 SACYAAGDERLADGEDKMA 1258
+ YA+G+E LADGED +A
Sbjct: 291 ATGYASGEEGLADGEDLVA 235
Score = 110 bits (235), Expect = 2e-023
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = -3 / +3
Query: 1247 PHHLQVAXXXXXXXXSVSYCCCST*TIENIASGSKSAQHQVQWYCSGSQVYLENRGPPWT 1068
PHHLQV + CCCS * IE+ ASGSKS+Q+QVQW+ S + VY+ENR P WT
Sbjct: 246 PHHLQVPLRRRRSRWPIEDCCCSA*AIEDPASGSKSSQYQVQWHRSRA*VYMENRRPSWT 425
Query: 1067 FQGQWYQLCKDCSKFC 1020
QW QLCKDC KFC
Sbjct: 426 V*RQWNQLCKDCPKFC 473
>gb|AV935139.1|AV935139 AV935139 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3a19 3', mRNA sequence
Length = 521
Score = 138 bits (297), Expect(3) = 2e-035
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = -1 / -1
Query: 496 GQGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVE 317
G+GKEALQYNGM+DAFRKTVRHEG GALYKGLVPNSVKVVPSIAIAFVTYE VKDV GVE
Sbjct: 521 GEGKEALQYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVXGVE 342
Query: 316 MRI 308
MRI
Sbjct: 341 MRI 333
Score = 101 bits (216), Expect(2) = 1e-022
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -3 / -3
Query: 491 RQRSTPVQWHDRCIQEDCSS*RSWCSLQGSCAELSQGGALNCHCICDLRGCEGCARSRDE 312
RQR TPVQW+ CIQE+CS R WCS+QGSC++LS+GGA H + +RG EGC RSRDE
Sbjct: 516 RQRGTPVQWYG*CIQENCSPRRFWCSVQGSCSQLSEGGAFYRHRVRHVRGREGCXRSRDE 337
Query: 311 D 309
D
Sbjct: 336 D 334
Score = 93.6 bits (198), Expect(3) = 1e-022
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +2 / +3
Query: 290 RPSSV*YPHLYS*HILHNLVSHKCNGN*GHHLD*VRHKTLVESTNSFMTNSLPECIDHAI 469
R S YPHLYS +ILH LV + +G+ HHL *V +KTLV+ST +F+ NS PECI+H I
Sbjct: 315 RSDSSVYPHLYSXNILHGLVRDERDGDRRHHLH*VGNKTLVQSTKTFVANSFPECINHTI 494
Query: 470 VLECFFA 490
VLEC FA
Sbjct: 495 VLECLFA 515
Score = 27.6 bits (54), Expect(3) = 1e-022
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 195 LMLNGAAVISFYPPCLQKKHN 257
++ + ++SFY PCL KK N
Sbjct: 209 MLNGASVLLSFYSPCLTKKGN 271
Score = 26.3 bits (51), Expect(3) = 2e-035
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 229 DRGSIQHKALS 197
Score = 25.4 bits (49), Expect(2) = 1e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 228 RRI*PRLHSASGPL 187
R I PRLHSA GPL
Sbjct: 239 RTIGPRLHSA*GPL 198
Score = 23.5 bits (45), Expect(3) = 1e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +1
Query: 125 ALQPTYYF 148
ALQPTYYF
Sbjct: 109 ALQPTYYF 132
Score = 23.1 bits (44), Expect(3) = 2e-035
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 271 VPFFC*AGRVEG 236
>gb|CD663274.1|CD663274 UCRHV18_04dh02_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_04dh02, mRNA sequence
Length = 593
Score = 62.5 bits (130), Expect(3) = 1e-029
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -1 / -3
Query: 493 QGKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVE 317
Q Y GM D F +T+ EGV YKG++PN +KVVP +I ++ YE +K L ++
Sbjct: 330 QANSEAAYKGMSDVFWRTLGQEGVSGFYKGILPNLLKVVPDASITYLVYEAMKKNLSLD 154
Score = 57.9 bits (120), Expect(3) = 1e-029
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = -1 / -3
Query: 784 VYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKD 674
+ + EG RA Y+G +PS++G+VPY G++ AVYE+LKD
Sbjct: 576 ILKHEGPRAFYRGLVPSLLGIVPYAGMDLAVYETLKD 466
Score = 48.3 bits (99), Expect(3) = 1e-029
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -1 / -3
Query: 646 LANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQ 533
+ D+E + +LGCG V+G +G T YPL VIR R+Q
Sbjct: 450 IIKDSEPGPIVQLGCGTVSGALGATCVYPLQVIRTRLQ 337
>gb|BG416154.2|BG416154 HVSMEk0009P18f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009P18f, mRNA sequence
Length = 982
Score = 60.2 bits (125), Expect(3) = 1e-025
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -1 / +1
Query: 814 YRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLK 677
YRG+ HAL + R+EG R LYKG P+++GV P + ++F+VYE+L+
Sbjct: 64 YRGISHALFAICRDEGPRGLYKGLGPTLLGVGPSIAISFSVYETLR 201
Score = 53.3 bits (110), Expect(3) = 1e-025
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -1 / +1
Query: 490 GKEALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDV 329
G+ + G++ F ++ EG LY+G++P KVVPS+ + F+TYE +K +
Sbjct: 343 GRANVYKTGLVGTFGHIIQTEGYRGLYRGILPEYCKVVPSVGLIFMTYETLKSM 504
Score = 41.4 bits (84), Expect(3) = 1e-025
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1 / +1
Query: 610 LGCGAVAGTIGQTVAYPLDVIRRRMQMVG 524
L CG+++G T+ +PLD++RRR Q+ G
Sbjct: 250 LACGSLSGVASSTITFPLDLVRRRKQLEG 336
>gb|AL503866.1|AL503866 AL503866 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03K18T 5', mRNA sequence
Length = 646
Score = 57.9 bits (120), Expect(4) = 5e-025
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = -1 / +2
Query: 838 QTDKSPYQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLK 677
++ S Y+G+ + T++R+ G + LY+G PS+ G+ PY GL F YE +K
Sbjct: 425 ESKPSEQVYKGILDCVKTIHRQNGLKGLYRGMAPSLYGIFPYSGLKFYXYEKMK 586
Score = 52.4 bits (108), Expect(4) = 5e-025
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 1123 NGTVQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILWAY 968
+G V + I+RTEG G ++GNG + ARIVP +A+ + +YE+ + I+ +
Sbjct: 119 SGLVGSFRTIYRTEGPLGFYRGNGASVARIVPYAALHYMAYEEYRRWIILGF 274
Score = 35.9 bits (72), Expect(4) = 5e-025
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 955 GEEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQ 836
G + + P+L L +G+ AG A+ +TYP+D+VR ++ Q
Sbjct: 269 GFPNVEQGPVLDLVSGSIAGGTAVVSTYPLDLVRTKLAYQ 388
Score = 23.5 bits (45), Expect(4) = 5e-025
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1 / +2
Query: 1180 PLERLKILLQVQ 1145
PLER+KILLQ +
Sbjct: 65 PLERVKILLQTR 100
>gb|BJ464458.1|BJ464458 BJ464458 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g20 5', mRNA sequence
Length = 618
Score = 59.3 bits (123), Expect(3) = 6e-024
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -1 / +3
Query: 484 EALQYNGMIDAFRKTVRHEGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVE 317
E+ Y GM A + V EG G LYKGL P+ VK P+ A+ FV YE + D +G +
Sbjct: 381 ESSTYKGMYHALTEIVVKEGFGGLYKGLFPSVVKSAPAGAVTFVAYEYISDWIGAK 548
Score = 50.6 bits (104), Expect(3) = 6e-024
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -1 / +3
Query: 850 RITVQTDKSPYQYRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLKDW 671
R + + P Y M AL + + G R LY G P+++ ++PY GL F Y++ K
Sbjct: 15 RTILASQGEPKVYPNMRSALVDIVQTRGVRGLYAGLTPTLVEIIPYAGLQFGSYDTFKRS 194
Query: 670 LLQTNSF 650
++ N +
Sbjct: 195 MMSWNRY 215
Score = 39.1 bits (79), Expect(3) = 6e-024
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1 / +3
Query: 652 FGLANDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVG 524
+G+ D+ CG AGT + +PLDV+++R Q+ G
Sbjct: 219 YGIEEDDSASSFQLFLCGFAAGTFSKAACHPLDVVKKRFQIEG 347
>gb|AY560327.2| Hordeum vulgare subsp. vulgare plastidial ADP-glucose transporter
mRNA, complete cds; nuclear gene for plastid product
Length = 1278
Score = 56.1 bits (116), Expect(3) = 5e-023
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -1 / +1
Query: 814 YRGMFHALGTVYREEGFRALYKGWLPSVIGVVPYVGLNFAVYESLK 677
Y + HA + R+EG LY+G PS+IGVVPY NF YE+L+
Sbjct: 727 YDNLLHAFVKIVRDEGPGELYRGLAPSLIGVVPYAAANFYAYETLR 864
Score = 51.0 bits (105), Expect(3) = 5e-023
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -1 / +1
Query: 1102 KYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASK 986
++I RTEG GLF+GN N R+ P+ A++ F+Y+ A K
Sbjct: 466 RWIMRTEGWPGLFRGNAVNVLRVAPSKAIEHFTYDTAKK 582
Score = 38.6 bits (78), Expect(3) = 5e-023
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -1 / +1
Query: 919 LGAGACAGIIAMSATYPMDMVRGRITVQTD 830
L AGA AG+ + TYPM++V+ R+T++ D
Sbjct: 634 LVAGALAGVASTLCTYPMELVKTRLTIEKD 723
>gb|BJ466101.1|BJ466101 BJ466101 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l03 3', mRNA sequence
Length = 402
Score = 90.0 bits (190), Expect(3) = 4e-021
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = -1 / -3
Query: 430 EGVGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVEMRI 308
EG GALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVEMRI
Sbjct: 400 EGFGALYKGLVPNSVKVVPSIAIAFVTYEAVKDVLGVEMRI 278
Score = 26.3 bits (51), Expect(3) = 4e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 218 DRGSIQHQALS 186
DRGSIQH+ALS
Sbjct: 174 DRGSIQHKALS 142
Score = 23.1 bits (44), Expect(3) = 4e-021
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 257 VVFFL*AGRVEG 222
V FF *AGRVEG
Sbjct: 216 VPFFC*AGRVEG 181
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 647,563,380
Number of Sequences: 312970
Number of extensions: 11417249
Number of successful extensions: 70034
Number of sequences better than 1.0e-020: 43
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15587956837
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)