TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCS9f07.yg.2.1
(394 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN818044.1|CN818044 HRO4472_D08_G16ZS5 Lib AA070E1X Aven... 273 1e-074
gb|CN817274.1|CN817274 HRO4458_D09_H18ZS5 Lib AA070E1X Aven... 262 2e-071
gb|CN821643.1|CN821643 HRO4408_F03_L06ZS5 Lib AA069E1X Aven... 29 0.29
gb|CN815969.1|CN815969 HRO4515_D12_H23ZS5 Lib AA071E1X Aven... 29 0.55
gb|CN816141.1|CN816141 HRO4517_D11_G21ZS5 Lib AA071E1X Aven... 29 0.55
gb|CN819771.1|CN819771 HRO4403_H07_P13ZS5 Lib AA069E1X Aven... 29 0.55
gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Aven... 28 1.0
gb|CN817213.1|CN817213 HRO4454_C01_F02ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN817230.1|CN817230 HRO4464_D06_G12ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN817358.1|CN817358 HRO4465_C11_F21ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN817563.1|CN817563 HRO4463_G05_M09ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN817885.1|CN817885 HRO4459_C06_E11ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN818595.1|CN818595 HRO4467_B03_C05ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN818743.1|CN818743 HRO4455_B11_C21ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN818767.1|CN818767 HRO4457_E04_J07ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN819247.1|CN819247 HRO4451_G09_M17ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN819282.1|CN819282 HRO4452_B10_C20ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN819292.1|CN819292 HRO4452_C08_E16ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN819317.1|CN819317 HRO4452_E10_I20ZS5 Lib AA070E1X Aven... 27 1.4
gb|CN820540.1|CN820540 HRO4413_E09_I17ZS5 Lib AA069E1X Aven... 27 1.4
emb|AJ010729.1|AFA010729 Avena fatua alpha-Amy2D gene, exon... 27 1.4
gb|CN814888.1|CN814888 HRO4503_E12_J23ZS5 Lib AA071E1X Aven... 27 2.0
gb|CN821464.1|CN821464 HRO4425_F06_K11ZS5 Lib AA069E1X Aven... 23 2.6
emb|AJ001140.1|AFJ001140 Avena fatua mRNA for VIVIPAROUS 1 ... 26 2.7
emb|AX004618.1| Sequence 1 from Patent WO9915667 26 2.7
gb|CN815981.1|CN815981 HRO4515_E12_J23ZS5 Lib AA071E1X Aven... 26 3.7
gb|CN816181.1|CN816181 HRO4517_H03_O05ZS5 Lib AA071E1X Aven... 26 3.7
gb|CN817548.1|CN817548 HRO4463_G09_M17ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817913.1|CN817913 HRO4462_B06_D12ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818145.1|CN818145 HRO4471_E02_I03ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818211.1|CN818211 HRO4470_H05_P10ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819074.1|CN819074 HRO4453_A04_B07ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819087.1|CN819087 HRO4453_A07_B13ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817199.1|CN817199 HRO4464_B10_C20ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817221.1|CN817221 HRO4464_C12_E24ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817240.1|CN817240 HRO4464_D12_G24ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817425.1|CN817425 HRO4465_G09_N17ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817442.1|CN817442 HRO4465_H10_P19ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817500.1|CN817500 HRO4458_A05_B10ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817683.1|CN817683 HRO4461_G07_N13ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817751.1|CN817751 HRO4453_F12_L23ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817764.1|CN817764 HRO4459_A08_A15ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817840.1|CN817840 HRO4453_E08_J15ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN817984.1|CN817984 HRO4472_H02_O04ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818077.1|CN818077 HRO4472_A06_A12ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818194.1|CN818194 HRO4471_A10_A19ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818221.1|CN818221 HRO4470_G10_N20ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818304.1|CN818304 HRO4460_A04_A08ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818367.1|CN818367 HRO4469_E06_J11ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818457.1|CN818457 HRO4453_C03_F05ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818641.1|CN818641 HRO4467_D12_G23ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818768.1|CN818768 HRO4457_E05_J09ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN818799.1|CN818799 HRO4456_B10_C20ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819201.1|CN819201 HRO4451_C10_E19ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819217.1|CN819217 HRO4451_E03_I05ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819227.1|CN819227 HRO4451-8_F02_K03ZS5 Lib AA070E1X Av... 26 3.7
gb|CN819320.1|CN819320 HRO4452_F01_K02ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819321.1|CN819321 HRO4452_F02_K04ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819344.1|CN819344 HRO4452_H01_O02ZS5 Lib AA070E1X Aven... 26 3.7
gb|CN819930.1|CN819930 HRO4406_B11_C22ZS5 Lib AA069E1X Aven... 26 3.7
gb|CN820610.1|CN820610 HRO4415_D08_H15ZS5 Lib AA069E1X Aven... 26 3.7
gb|CN820815.1|CN820815 HRO4420_B11_D22ZS5 Lib AA069E1X Aven... 26 3.7
gb|CN821227.1|CN821227 HRO4428_H10_P20ZS5 Lib AA069E1X Aven... 26 3.7
gb|CN821569.1|CN821569 HRO4426_G10_M20ZS5 Lib AA069E1X Aven... 26 3.7
gb|CN818461.1|CN818461 HRO4460_D04_G08ZS5 Lib AA070E1X Aven... 25 4.0
gb|CN815105.1|CN815105 HRO4505_H09_O17ZS5 Lib AA071E1X Aven... 25 5.1
gb|CN817172.1|CN817172 HRO4459_H07_O13ZS5 Lib AA070E1X Aven... 25 5.1
gb|CN819345.1|CN819345 HRO4452_H02_O04ZS5 Lib AA070E1X Aven... 25 5.1
gb|CN819407.1|CN819407 HRO4405_F07_K13ZS5 Lib AA069E1X Aven... 25 5.1
gb|CN819481.1|CN819481 HRO4406_E08_I16ZS5 Lib AA069E1X Aven... 25 5.1
gb|CN815197.1|CN815197 HRO4506_H12_O24ZS5 Lib AA071E1X Aven... 25 7.0
gb|CN816943.1|CN816943 HRO4526_E05_I10ZS5 Lib AA071E1X Aven... 25 7.0
gb|CN817163.1|CN817163 HRO4528_H10_P20ZS5 Lib AA071E1X Aven... 25 7.0
gb|CN817418.1|CN817418 HRO4465_G06_N11ZS5 Lib AA070E1X Aven... 25 7.0
gb|CN818504.1|CN818504 HRO4457_H12_P23ZS5 Lib AA070E1X Aven... 25 7.0
gb|CN820888.1|CN820888 HRO4421_B02_C03ZS5 Lib AA069E1X Aven... 25 7.0
gb|CN818968.1|CN818968 HRO4474_F05_L10ZS5 Lib AA070E1X Aven... 24 9.5
gb|CN815574.1|CN815574 HRO4513_B10_C19ZS5 Lib AA071E1X Aven... 24 9.7
gb|CN816630.1|CN816630 HRO4523_A06_B11ZS5 Lib AA071E1X Aven... 24 9.7
gb|CN818088.1|CN818088 HRO4471_H12_O23ZS5 Lib AA070E1X Aven... 24 9.7
gb|CN818773.1|CN818773 HRO4468_D07_G14ZS5 Lib AA070E1X Aven... 24 9.7
gb|CN818815.1|CN818815 HRO4473_G04_XXXZS5 Lib AA070E1X Aven... 24 9.7
gb|CN819871.1|CN819871 HRO4407_A10_B19ZS5 Lib AA069E1X Aven... 24 9.7
gb|CN821389.1|CN821389 HRO4424_G05_N10ZS5 Lib AA069E1X Aven... 24 9.7
>gb|CN818044.1|CN818044 HRO4472_D08_G16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_D08_G16, mRNA sequence
Length = 842
Score = 273 bits (590), Expect = 1e-074
Identities = 109/131 (83%), Positives = 121/131 (92%)
Frame = -1 / +1
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR C+CSSKKG VYHLF
Sbjct: 181 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRTCNCSSKKGIVYHLF 360
Query: 214 IRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRI 35
+RERGRFK+ESIY+RS +LTL ALE+AV FRS+NHVP+WKDERP SIRGGD+LK+YRI
Sbjct: 361 VRERGRFKTESIYLRSNKLTLQALETAVHATFRSINHVPIWKDERPSSIRGGDELKVYRI 540
Query: 34 YPVGLTQRQAL 2
YPVGLT+R+AL
Sbjct: 541 YPVGLTEREAL 573
Score = 185 bits (398), Expect = 4e-048
Identities = 87/127 (68%), Positives = 92/127 (72%)
Frame = +3 / -1
Query: 12 RCVRPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSD 191
R VRPTG*ILY+F FH GTWL DLN+ TA SKA VN DL *MLS
Sbjct: 563 RSVRPTG*ILYTFNSSPPRMLDGLSSFHIGTWLMDLNVACTAVSKACKVNLFDLR*MLSV 384
Query: 192 LNRPLSRINKW*TVPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMSIRALK 371
LN PLS NKW T+PFLLEQL RF+NFGVLSSF *I VAIC+QRR DE*TAAMSI ALK
Sbjct: 383 LNLPLSLTNKWYTIPFLLEQLHVRFINFGVLSSFS*IFVAICMQRRHDE*TAAMSISALK 204
Query: 372 ESDGPSY 392
ESDGPSY
Sbjct: 203 ESDGPSY 183
Score = 163 bits (351), Expect = 1e-041
Identities = 75/128 (58%), Positives = 87/128 (67%)
Frame = +2 / -3
Query: 11 TLC*TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL* 190
+ C T+W+NSV Q+IPTS WPFILPYRN+V+G K + Q * S INA
Sbjct: 564 SFCKTNWINSVHLQLIPTSYA*WPFILPYRNMVDGSKCGMYSSLQSL*S*FV*S*INAFC 385
Query: 191 LKPPSLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSFE 370
LKPPSLS+K VV FAGT T +I KFWSPF MNL S+MY + T *MNRCHV+K E
Sbjct: 384 LKPPSLSNK*VVYYSFFAGTVTCAIHKFWSPFFFFMNLRSDMYAEAT**MNRCHVNKCLE 205
Query: 371 RIRWTIIL 394
RIRWTIIL
Sbjct: 204 RIRWTIIL 181
Score = 162 bits (348), Expect = 3e-041
Identities = 77/127 (60%), Positives = 91/127 (71%)
Frame = -2 / +2
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
SMMVHLILS+ L TWQRFIH V YI L RF+ ++KGLQNL I V VPAK+ +TT L
Sbjct: 182 SMMVHLILSRHLLTWQRFIHHVASAYISLRRFMKKKKGLQNL*IAHVTVPAKKE*YTTYL 361
Query: 213 SEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEF 34
EREGGL Q+AFI*D+ +* ++ W L +L PST FLYGRMKGH+ EVGM+* TEF
Sbjct: 362 LEREGGLRQKAFI*DQTN*LYKLWRLLYMPHLDPSTMFLYGRMKGHQAYEVGMS*RCTEF 541
Query: 33 TQSV*HN 13
Q V N
Sbjct: 542 IQLVLQN 562
Score = 154 bits (331), Expect = 6e-039
Identities = 76/127 (59%), Positives = 92/127 (72%)
Frame = -3 / +3
Query: 392 V*WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVY 213
V*WSI*FFQ +Y HGSGSFI+S L+TY Y+DS K KDSKIY+S +*LFQQK +S+PL+
Sbjct: 183 V*WSI*FFQGTY*HGSGSFIMSPLHTYRYEDS*KRRKDSKIYESHM*LFQQKRNSIPLIC 362
Query: 212 PRERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNL 33
RER V* R+HL +I +N S G C I*+ QP S MEG*KA ++ RWG* E +QNL
Sbjct: 363 *REREV*DRKHLSKIKQINFTSFGDCCTCHI*IHQPCSYMEG*KAIKHTRWG*VEGVQNL 542
Query: 32 PSRSNTT 12
S S T
Sbjct: 543 SSWSYRT 563
Score = 83.5 bits (176), Expect(2) = 6e-028
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +1 / -2
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
FCWNSY D *ILESF +ES *+YV + D MNEPLPC+* *KNQMDHHT
Sbjct: 337 FCWNSYMCDS*ILESFLLFHESS*RYVCRGDMMNEPLPCQ*VP*KNQMDHHT 182
Score = 54.2 bits (112), Expect(2) = 6e-028
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +1 / -2
Query: 13 VVLDRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
V+ D+L KFC S HPHL +AFHPSI E G* *++ Q P+L L I KC
Sbjct: 562 VL*DQLDKFCTPSTHPHLVCLMAFHPSI*EHG*WI*MWHVQQSPKLVKLICLILDKC 392
>gb|CN817274.1|CN817274 HRO4458_D09_H18ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_D09_H18, mRNA sequence
Length = 542
Score = 262 bits (567), Expect = 2e-071
Identities = 105/131 (80%), Positives = 118/131 (90%)
Frame = -1 / +3
Query: 394 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHLKEERTPKFTNRPCSCSSKKGTVYHLF 215
KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIH KEERTPKF NR C+CSSKKGTVYHLF
Sbjct: 9 KYDGPSDSFKALIDMAAVHSSCRLCIHIATKIHEKEERTPKFMNRTCNCSSKKGTVYHLF 188
Query: 214 IRERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRI 35
RERGR K+ESIY+RS +LTL ALESA+ FRS+NHVPVWKDERP SIRGGD+LK+Y+I
Sbjct: 189 ARERGRLKTESIYLRSNELTLEALESAIHATFRSINHVPVWKDERPSSIRGGDELKVYKI 368
Query: 34 YPVGLTQRQAL 2
YPVGL + +++
Sbjct: 369 YPVGLYRTRSI 401
Score = 186 bits (401), Expect = 1e-048
Identities = 87/124 (70%), Positives = 92/124 (74%)
Frame = +3 / -2
Query: 21 RPTG*ILYSFRXXXXXXXXXXXXFHTGTWLRDLNLPSTADSKAPSVNWPDLI*MLSDLNR 200
RPTG*ILY+F FHTGTWL DLN+ ADSKA VN DL *MLS L+
Sbjct: 382 RPTG*ILYTFNSSPPRMLDGLSSFHTGTWLMDLNVACIADSKASKVNSFDLR*MLSVLSL 203
Query: 201 PLSRINKW*TVPFLLEQLQGRFVNFGVLSSFK*ILVAICIQRRQDE*TAAMSIRALKESD 380
PLS NKW TVPFLLEQL RF+NFGVLSSF *I VAIC+QRRQDE*TAAMSI ALKESD
Sbjct: 202 PLSLANKWYTVPFLLEQLHVRFINFGVLSSFS*IFVAICMQRRQDE*TAAMSISALKESD 23
Query: 381 GPSY 392
GPSY
Sbjct: 22 GPSY 11
Score = 165 bits (355), Expect = 3e-042
Identities = 74/124 (59%), Positives = 86/124 (69%)
Frame = +2 / -1
Query: 23 TDWVNSV*FQVIPTSNTRWPFILPYRNVVEGPKFTEHCRFQGSQC*LARSHINAL*LKPP 202
T+W+N V Q++P+S WPFILPYRN+V+G K + R Q * S INA LKPP
Sbjct: 380 TNWINFVHLQLVPSSYA*WPFILPYRNMVDGSKCGMYSRLQSF*S*FI*S*INAFCLKPP 201
Query: 203 SLSDKQVVNCPLFAGTATRSICKFWSPFLL*MNLGSNMYTKTTR*MNRCHVDKSFERIRW 382
SLS K VV C FAGT T +I KFWSPF MNL S+MY +TT *MNRCHV+K ERIRW
Sbjct: 200 SLSSK*VVYCSFFAGTVTCAIHKFWSPFFFFMNLCSDMYAETTG*MNRCHVNKCLERIRW 21
Query: 383 TIIL 394
TIIL
Sbjct: 20 TIIL 9
Score = 157 bits (338), Expect = 7e-040
Identities = 75/124 (60%), Positives = 90/124 (72%)
Frame = -2 / +1
Query: 393 SMMVHLILSKLLSTWQRFIHLVVFVYILLPRFI*RRKGLQNLQIDLVAVPAKRGQFTTCL 214
SMMVHLILS+ L TWQRFIH VV YI L RF+ ++KGLQNL I V VPAK+ Q+TT L
Sbjct: 10 SMMVHLILSRHLLTWQRFIHPVVSAYISLQRFMKKKKGLQNL*IAHVTVPAKKEQYTTYL 189
Query: 213 SEREGGLSQRAFI*DRAS*HWEPWNLQCSVNLGPSTTFLYGRMKGHRVLEVGMT*NYTEF 34
EREGGL Q+AFI*D+ +* + W+L +L PST FLYGRMKGH+ E G +* T+F
Sbjct: 190 LEREGGLRQKAFI*DQMN*L*KLWSLLYMPHLDPSTMFLYGRMKGHQAYEEGTS*RCTKF 369
Query: 33 TQSV 22
Q V
Sbjct: 370 IQLV 381
Score = 151 bits (325), Expect = 4e-038
Identities = 75/124 (60%), Positives = 91/124 (73%)
Frame = -3 / +2
Query: 392 V*WSI*FFQSSYRHGSGSFILSSLYTYCYQDSFKGGKDSKIYKSTL*LFQQKGDSLPLVY 213
V*WSI*FFQ +Y HGSGSFILSSL+TY Y+DS K KDSKIY+S +*LFQQK +S+PL+
Sbjct: 11 V*WSI*FFQGTY*HGSGSFILSSLHTYRYKDS*KRRKDSKIYESHM*LFQQKRNSIPLIC 190
Query: 212 PRERAV*VREHLYEIGPVNTGSLGICSAR*I*VPQPRSCMEG*KATEY*RWG*PETIQNL 33
RER * R+HL +I +N S G+C I*+ QP SCMEG*KA ++ R G E +QNL
Sbjct: 191 *REREA*DRKHLSKIK*INFRSFGVCYTCHI*IHQPCSCMEG*KAIKHTRRGRVEGVQNL 370
Query: 32 PSRS 21
S S
Sbjct: 371 SSWS 382
Score = 88.6 bits (187), Expect(2) = 6e-028
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +1 / -3
Query: 238 FCWNSYKVDL*ILESFPPLNESW*QYVYKDDKMNEPLPCR*EL*KNQMDHHT 393
FCWNSY D *ILESF +ES *+YV +DD+MNEPLPC+* *KNQMDHHT
Sbjct: 165 FCWNSYMCDS*ILESFLLFHESL*RYVCRDDRMNEPLPCQ*VP*KNQMDHHT 10
Score = 48.7 bits (100), Expect(2) = 6e-028
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1 / -3
Query: 22 DRLGKFCIVSGHPHL*YSVAFHPSIQERG*GT*IYRALQIPRLPVLTGPISYKC 183
D+L KFC S P L +AFHPSIQE G* *++ Q P+L L I KC
Sbjct: 381 DQLDKFCTPSTRPLLVCLMAFHPSIQEHG*WI*MWHV*QTPKLLKLIHLILDKC 220
>gb|CN821643.1|CN821643 HRO4408_F03_L06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4408_F03_L06, mRNA
sequence
Length = 492
Score = 29.5 bits (58), Expect = 0.29
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 265 NRPCSCSSKKGTVYHLFIRERGRFKSES 182
+R CS +K GTV++ +I RFK ++
Sbjct: 377 SRVCSVGNKTGTVWYTYIYSAVRFKEKN 294
>gb|CN815969.1|CN815969 HRO4515_D12_H23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_D12_H23, mRNA sequence
Length = 734
Score = 28.6 bits (56), Expect = 0.55
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 260 TL*LFQQKGDSLPLVYPRERAV 195
TL +QKG SLPL P++R +
Sbjct: 126 TLTTLRQKGSSLPLCLPKQRLI 191
>gb|CN816141.1|CN816141 HRO4517_D11_G21ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_D11_G21, mRNA sequence
Length = 811
Score = 28.6 bits (56), Expect = 0.55
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 260 TL*LFQQKGDSLPLVYPRERAV 195
TL +QKG SLPL P++R +
Sbjct: 468 TLTTLRQKGSSLPLCLPKQRLI 533
>gb|CN819771.1|CN819771 HRO4403_H07_P13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_H07_P13, mRNA
sequence
Length = 712
Score = 28.6 bits (56), Expect = 0.55
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1 / +2
Query: 322 CIHIATKIHLKEERTPKFTNRPCSCSSKKGTV 227
C+ IA +H K+ PK+ P S K +V
Sbjct: 41 CVDIALTVHFKQNSFPKWLQTPTSHPKKTQSV 136
>gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_C11_E21, mRNA sequence
Length = 894
Score = 27.6 bits (54), Expect = 1.0
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 240 LLEQLQGRFVNFGVLSSF 293
LLE L G V FGVLS F
Sbjct: 85 LLESLDGNIVVFGVLSQF 32
>gb|CN817213.1|CN817213 HRO4454_C01_F02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4454_C01_F02, mRNA sequence
Length = 304
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 142 MLVHFLLTTLLSGFYFRFHTIVYVCTML 225
>gb|CN817230.1|CN817230 HRO4464_D06_G12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4464_D06_G12, mRNA sequence
Length = 383
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 195 MLVHFLLTTLLSGFYFRFHTIVYVCTML 278
>gb|CN817358.1|CN817358 HRO4465_C11_F21ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_C11_F21, mRNA sequence
Length = 391
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 241 MLVHFLLTTLLSGFYFRFHTIVYVCTML 324
>gb|CN817563.1|CN817563 HRO4463_G05_M09ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4463_G05_M09, mRNA sequence
Length = 380
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 230 MLVHFLLTTLLSGFYFRFHTIVYVCTML 313
>gb|CN817885.1|CN817885 HRO4459_C06_E11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_C06_E11, mRNA sequence
Length = 554
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 356 MLVHFLLTTLLSGFYFRFHTIVYVCTML 439
>gb|CN818595.1|CN818595 HRO4467_B03_C05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_B03_C05, mRNA sequence
Length = 292
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 142 MLVHFLLTTLLSGFYFRFHTIVYVCTML 225
>gb|CN818743.1|CN818743 HRO4455_B11_C21ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4455_B11_C21, mRNA sequence
Length = 375
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / -1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 156 MLVHFLLTTLLSGFYFRFHTIVYVCTML 73
>gb|CN818767.1|CN818767 HRO4457_E04_J07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_E04_J07, mRNA sequence
Length = 352
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 155 MLVHFLLTTLLSGFYFRFHTIVYVCTML 238
>gb|CN819247.1|CN819247 HRO4451_G09_M17ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4451_G09_M17, mRNA sequence
Length = 372
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 204 MLVHFLLTTLLSGFYFRFHTIVYVCTML 287
>gb|CN819282.1|CN819282 HRO4452_B10_C20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_B10_C20, mRNA sequence
Length = 587
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 418 MLVHFLLTTLLSGFYFRFHTIVYVCTML 501
>gb|CN819292.1|CN819292 HRO4452_C08_E16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_C08_E16, mRNA sequence
Length = 531
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 381 MLVHFLLTTLLSGFYFRFHTIVYVCTML 464
>gb|CN819317.1|CN819317 HRO4452_E10_I20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_E10_I20, mRNA sequence
Length = 372
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 196 MLVHFLLTTLLSGFYFRFHTIVYVCTML 279
>gb|CN820540.1|CN820540 HRO4413_E09_I17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_E09_I17, mRNA
sequence
Length = 513
Score = 27.2 bits (53), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V+V +L
Sbjct: 316 MLVHFLLTTLLSGFYFRFHTIVYVCTML 399
>emb|AJ010729.1|AFA010729 Avena fatua alpha-Amy2D gene, exons 1-4
Length = 2701
Score = 27.2 bits (53), Expect = 1.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2 / -3
Query: 68 NTRWPFILPYRNVVEGPKFTEHCRFQGS 151
N W P++N ++ T HC F+G+
Sbjct: 98 NLGWHGRTPWKNEIQAQIETHHCLFEGN 15
>gb|CN814888.1|CN814888 HRO4503_E12_J23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_E12_J23, mRNA sequence
Length = 751
Score = 26.7 bits (52), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2 / +1
Query: 99 LYGRMKGHRVLEVGMT*NYTEFTQSV*HNVRLC 1
L+ +KG RVL G T + F++ V HN C
Sbjct: 13 LFDSLKGTRVLTCGHTMHMDCFSEMVEHNKYSC 111
>gb|CN821464.1|CN821464 HRO4425_F06_K11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F06_K11, mRNA
sequence
Length = 463
Score = 23.1 bits (44), Expect(2) = 2.6
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1 / -3
Query: 121 FRSLNHVPVWKDERPPSIRGGDDLKLYRIYPVGLTQR 11
+R + V W+ E R +++R +PV T R
Sbjct: 185 YRGMYSVYTWRPEACAQFRERVARRIHRFFPVKETNR 75
Score = 19.4 bits (36), Expect(2) = 2.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 342 FIHLVVFVYILL 307
FIH +++YI L
Sbjct: 448 FIHGYIYIYIYL 413
>emb|AJ001140.1|AFJ001140 Avena fatua mRNA for VIVIPAROUS 1 homologue transcription factor
Length = 2336
Score = 26.3 bits (51), Expect = 2.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 283 RTPKFTNRPCSCSSKKGTVYH 221
RTP T+RP +++ GT++H
Sbjct: 490 RTPSPTSRPPRATAEPGTLHH 552
>emb|AX004618.1| Sequence 1 from Patent WO9915667
Length = 2324
Score = 26.3 bits (51), Expect = 2.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 283 RTPKFTNRPCSCSSKKGTVYH 221
RTP T+RP +++ GT++H
Sbjct: 481 RTPSPTSRPPRATAEPGTLHH 543
>gb|CN815981.1|CN815981 HRO4515_E12_J23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_E12_J23, mRNA sequence
Length = 639
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 197 PPSLSDKQVVNCPLFA 244
PP+LSDK VVN F+
Sbjct: 223 PPALSDKSVVNAMEFS 270
>gb|CN816181.1|CN816181 HRO4517_H03_O05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_H03_O05, mRNA sequence
Length = 879
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2 / -2
Query: 375 ILSKLLSTWQRFIHLVVFVYILLP 304
IL STWQ +IHL ++ P
Sbjct: 548 ILPSTFSTWQFYIHLHEILFTYTP 477
>gb|CN817548.1|CN817548 HRO4463_G09_M17ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4463_G09_M17, mRNA sequence
Length = 637
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 445 MLVHFLLMTLLSVFYFRFHTIVYV 516
>gb|CN817913.1|CN817913 HRO4462_B06_D12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4462_B06_D12, mRNA sequence
Length = 631
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 439 MLVHFLLMTLLSVFYFRFHTIVYV 510
>gb|CN818145.1|CN818145 HRO4471_E02_I03ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_E02_I03, mRNA sequence
Length = 640
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 185 MLVHFLLMTLLSVFYFRFHTIVYV 114
>gb|CN818211.1|CN818211 HRO4470_H05_P10ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4470_H05_P10, mRNA sequence
Length = 643
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 450 MLVHFLLMTLLSVFYFRFHTIVYV 521
>gb|CN819074.1|CN819074 HRO4453_A04_B07ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_A04_B07, mRNA sequence
Length = 674
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 463 MLVHFLLMTLLSVFYFRFHTIVYV 534
>gb|CN819087.1|CN819087 HRO4453_A07_B13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_A07_B13, mRNA sequence
Length = 651
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 445 MLVHFLLMTLLSVFYFRFHTIVYV 516
>gb|CN817199.1|CN817199 HRO4464_B10_C20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4464_B10_C20, mRNA sequence
Length = 590
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 399 MLVHFLLMTLLSVFYFRFHTIVYV 470
>gb|CN817221.1|CN817221 HRO4464_C12_E24ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4464_C12_E24, mRNA sequence
Length = 525
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 332 MLVHFLLMTLLSVFYFRFHTIVYV 403
>gb|CN817240.1|CN817240 HRO4464_D12_G24ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4464_D12_G24, mRNA sequence
Length = 301
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 129 MLVHFLLMTLLSVFYFRFHTIVYV 200
>gb|CN817425.1|CN817425 HRO4465_G09_N17ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_G09_N17, mRNA sequence
Length = 489
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 248 MLVHFLLMTLLSVFYFRFHTIVYV 319
>gb|CN817442.1|CN817442 HRO4465_H10_P19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_H10_P19, mRNA sequence
Length = 572
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 379 MLVHFLLMTLLSVFYFRFHTIVYV 450
>gb|CN817500.1|CN817500 HRO4458_A05_B10ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_A05_B10, mRNA sequence
Length = 355
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 183 MLVHFLLMTLLSVFYFRFHTIVYV 254
>gb|CN817683.1|CN817683 HRO4461_G07_N13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4461_G07_N13, mRNA sequence
Length = 486
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 314 MLVHFLLMTLLSVFYFRFHTIVYV 385
>gb|CN817751.1|CN817751 HRO4453_F12_L23ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_F12_L23, mRNA sequence
Length = 541
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 367 MLVHFLLMTLLSVFYFRFHTIVYV 438
>gb|CN817764.1|CN817764 HRO4459_A08_A15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_A08_A15, mRNA sequence
Length = 532
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 360 MLVHFLLMTLLSVFYFRFHTIVYV 431
>gb|CN817840.1|CN817840 HRO4453_E08_J15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_E08_J15, mRNA sequence
Length = 568
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 379 MLVHFLLMTLLSVFYFRFHTIVYV 450
>gb|CN817984.1|CN817984 HRO4472_H02_O04ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_H02_O04, mRNA sequence
Length = 236
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 64 MLVHFLLMTLLSVFYFRFHTIVYV 135
>gb|CN818077.1|CN818077 HRO4472_A06_A12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_A06_A12, mRNA sequence
Length = 386
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 255 MLVHFLLMTLLSVFYFRFHTIVYV 326
>gb|CN818194.1|CN818194 HRO4471_A10_A19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_A10_A19, mRNA sequence
Length = 532
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 339 MLVHFLLMTLLSVFYFRFHTIVYV 410
>gb|CN818221.1|CN818221 HRO4470_G10_N20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4470_G10_N20, mRNA sequence
Length = 598
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 391 MLVHFLLMTLLSVFYFRFHTIVYV 462
>gb|CN818304.1|CN818304 HRO4460_A04_A08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_A04_A08, mRNA sequence
Length = 585
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 392 MLVHFLLMTLLSVFYFRFHTIVYV 463
>gb|CN818367.1|CN818367 HRO4469_E06_J11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_E06_J11, mRNA sequence
Length = 586
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 396 MLVHFLLMTLLSVFYFRFHTIVYV 467
>gb|CN818457.1|CN818457 HRO4453_C03_F05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4453_C03_F05, mRNA sequence
Length = 411
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 237 MLVHFLLMTLLSVFYFRFHTIVYV 308
>gb|CN818641.1|CN818641 HRO4467_D12_G23ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_D12_G23, mRNA sequence
Length = 432
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 260 MLVHFLLMTLLSVFYFRFHTIVYV 331
>gb|CN818768.1|CN818768 HRO4457_E05_J09ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_E05_J09, mRNA sequence
Length = 361
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 170 MLVHFLLMTLLSVFYFRFHTIVYV 241
>gb|CN818799.1|CN818799 HRO4456_B10_C20ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4456_B10_C20, mRNA sequence
Length = 429
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 255 MLVHFLLMTLLSVFYFRFHTIVYV 326
>gb|CN819201.1|CN819201 HRO4451_C10_E19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4451_C10_E19, mRNA sequence
Length = 432
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 220 MLVHFLLMTLLSVFYFRFHTIVYV 291
>gb|CN819217.1|CN819217 HRO4451_E03_I05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4451_E03_I05, mRNA sequence
Length = 592
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 394 MLVHFLLMTLLSVFYFRFHTIVYV 465
>gb|CN819227.1|CN819227 HRO4451-8_F02_K03ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green
leaf Avena sativa cDNA clone HRO4451-8_F02_K03, mRNA
sequence
Length = 457
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 285 MLVHFLLMTLLSVFYFRFHTIVYV 356
>gb|CN819320.1|CN819320 HRO4452_F01_K02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_F01_K02, mRNA sequence
Length = 514
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 323 MLVHFLLMTLLSVFYFRFHTIVYV 394
>gb|CN819321.1|CN819321 HRO4452_F02_K04ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_F02_K04, mRNA sequence
Length = 456
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 284 MLVHFLLMTLLSVFYFRFHTIVYV 355
>gb|CN819344.1|CN819344 HRO4452_H01_O02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_H01_O02, mRNA sequence
Length = 598
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 401 MLVHFLLMTLLSVFYFRFHTIVYV 472
>gb|CN819930.1|CN819930 HRO4406_B11_C22ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_B11_C22, mRNA
sequence
Length = 446
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 255 MLVHFLLMTLLSVFYFRFHTIVYV 326
>gb|CN820610.1|CN820610 HRO4415_D08_H15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_D08_H15, mRNA
sequence
Length = 453
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 279 MLVHFLLMTLLSVFYFRFHTIVYV 350
>gb|CN820815.1|CN820815 HRO4420_B11_D22ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_B11_D22, mRNA
sequence
Length = 586
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 396 MLVHFLLMTLLSVFYFRFHTIVYV 467
>gb|CN821227.1|CN821227 HRO4428_H10_P20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_H10_P20, mRNA
sequence
Length = 457
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 272 MLVHFLLMTLLSVFYFRFHTIVYV 343
>gb|CN821569.1|CN821569 HRO4426_G10_M20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_G10_M20, mRNA
sequence
Length = 534
Score = 25.8 bits (50), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +3
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L LLS + H +V+V
Sbjct: 369 MLVHFLLMTLLSVFYFRFHTIVYV 440
>gb|CN818461.1|CN818461 HRO4460_D04_G08ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_D04_G08, mRNA sequence
Length = 546
Score = 24.9 bits (48), Expect(2) = 4.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 340 HSSCRLCIHIATKIHLK 290
H R+CIHI ++H +
Sbjct: 496 HYMIRICIHIRQRLHFR 446
Score = 17.1 bits (31), Expect(2) = 4.0
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1 / -1
Query: 277 PKFTNRPCSC 248
PKFT SC
Sbjct: 351 PKFTTCGASC 322
>gb|CN815105.1|CN815105 HRO4505_H09_O17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_H09_O17, mRNA sequence
Length = 458
Score = 25.4 bits (49), Expect = 5.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1 / -2
Query: 301 IHLKEERTPKFTNRPCSCSSKKGTVYH 221
+HL + PK +NR +++ TV+H
Sbjct: 160 VHLWMKPLPKISNRFSPAKARESTVHH 80
>gb|CN817172.1|CN817172 HRO4459_H07_O13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_H07_O13, mRNA sequence
Length = 537
Score = 25.4 bits (49), Expect = 5.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2 / +2
Query: 390 MMVHLILSKLLSTWQRFIHLVVFVYILL 307
M+VH +L+ LLS + H +V V +L
Sbjct: 368 MLVHFLLTTLLSGFYFRFHTIVHVCTML 451
>gb|CN819345.1|CN819345 HRO4452_H02_O04ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_H02_O04, mRNA sequence
Length = 588
Score = 25.4 bits (49), Expect = 5.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 390 MMVHLILSKLLSTWQRFIHLVVFV 319
M+VH +L+ LLS +H +V+V
Sbjct: 373 MLVHFLLTTLLSAVYFRVHTLVYV 444
>gb|CN819407.1|CN819407 HRO4405_F07_K13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_F07_K13, mRNA
sequence
Length = 533
Score = 25.4 bits (49), Expect = 5.1
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 260 SICKFWSPFLL 292
SIC+ WSP+LL
Sbjct: 460 SICETWSPYLL 492
>gb|CN819481.1|CN819481 HRO4406_E08_I16ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E08_I16, mRNA
sequence
Length = 366
Score = 25.4 bits (49), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1 / +3
Query: 196 FKSESIYMRSGQLTLGALESA 134
F+ S +R GQ T GALESA
Sbjct: 51 FEGVSEQVRRGQWTRGALESA 113
>gb|CN815197.1|CN815197 HRO4506_H12_O24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4506_H12_O24, mRNA sequence
Length = 723
Score = 24.9 bits (48), Expect = 7.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 326 SLYTYCYQDSFKGG 285
++YTYC+Q GG
Sbjct: 125 AVYTYCFQRQISGG 84
>gb|CN816943.1|CN816943 HRO4526_E05_I10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_E05_I10, mRNA sequence
Length = 555
Score = 24.9 bits (48), Expect = 7.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1 / +1
Query: 262 RPCSCSSKKGTVYHLFI 212
R C C ++GTV+H +
Sbjct: 406 RMCCCRFRRGTVFHSLV 456
>gb|CN817163.1|CN817163 HRO4528_H10_P20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_H10_P20, mRNA sequence
Length = 521
Score = 24.9 bits (48), Expect = 7.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / +1
Query: 326 SLYTYCYQDSFKGG 285
++YTYC+Q GG
Sbjct: 403 AVYTYCFQRQISGG 444
>gb|CN817418.1|CN817418 HRO4465_G06_N11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_G06_N11, mRNA sequence
Length = 605
Score = 24.9 bits (48), Expect = 7.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 387 MVHLILSKLLSTW 349
+VHLI +K +STW
Sbjct: 417 LVHLIFNKSMSTW 455
>gb|CN818504.1|CN818504 HRO4457_H12_P23ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4457_H12_P23, mRNA sequence
Length = 908
Score = 24.9 bits (48), Expect = 7.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 366 KLLSTWQRFIHLVVFVYILL 307
+L++ WQ +HL+ FV+ LL
Sbjct: 497 ELVAPWQFMVHLM*FVHWLL 556
>gb|CN820888.1|CN820888 HRO4421_B02_C03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_B02_C03, mRNA
sequence
Length = 509
Score = 24.9 bits (48), Expect = 7.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 326 SLYTYCYQDSFKGG 285
++YTYC+Q GG
Sbjct: 390 AVYTYCFQRQISGG 431
>gb|CN818968.1|CN818968 HRO4474_F05_L10ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_F05_L10, mRNA sequence
Length = 402
Score = 23.5 bits (45), Expect(2) = 9.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 204 LSRINKW*TVPFLLEQLQ 257
LS W* PF LEQ+Q
Sbjct: 185 LSTKCSW*PAPFALEQIQ 238
Score = 16.6 bits (30), Expect(2) = 9.5
Identities = 6/20 (30%), Positives = 7/20 (35%)
Frame = +3 / +2
Query: 105 WLRDLNLPSTADSKAPSVNW 164
W NLP + V W
Sbjct: 11 WAPARNLPGSRKESCCQVMW 70
>gb|CN815574.1|CN815574 HRO4513_B10_C19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_B10_C19, mRNA sequence
Length = 716
Score = 24.4 bits (47), Expect = 9.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2 / +1
Query: 203 SLSDKQVVNCPLFAGTATRSICKFW 277
S DK++V CP G + FW
Sbjct: 499 SYFDKKIVGCPGAEGEDEHDVVWFW 573
>gb|CN816630.1|CN816630 HRO4523_A06_B11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4523_A06_B11, mRNA sequence
Length = 737
Score = 24.4 bits (47), Expect = 9.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 271 ILESFPPLNESW 306
+L + PPLN SW
Sbjct: 391 VLSALPPLNSSW 356
>gb|CN818088.1|CN818088 HRO4471_H12_O23ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_H12_O23, mRNA sequence
Length = 871
Score = 24.4 bits (47), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3 / -1
Query: 371 FQSSYRHGSGSFILSSLYTYC 309
F S +RH G LS+ +T C
Sbjct: 574 FNSGFRHQKGVLKLSTPFTIC 512
>gb|CN818773.1|CN818773 HRO4468_D07_G14ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_D07_G14, mRNA sequence
Length = 842
Score = 24.4 bits (47), Expect = 9.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2 / -1
Query: 197 PPSLSDKQVVNCPLFAGTATRSICKFWSPF 286
PP L + C + ++ S+CK S F
Sbjct: 500 PPPLLSSPLPTCGVLRACSSASLCKMLSSF 411
>gb|CN818815.1|CN818815 HRO4473_G04_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_G04_XXX, mRNA sequence
Length = 608
Score = 24.4 bits (47), Expect = 9.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2 / +1
Query: 153 WEPWNLQCSVN 121
WE WN Q SVN
Sbjct: 103 WEAWNHQISVN 135
>gb|CN819871.1|CN819871 HRO4407_A10_B19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_A10_B19, mRNA
sequence
Length = 507
Score = 24.4 bits (47), Expect = 9.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1 / -2
Query: 235 PFCWNSYKVDL*ILESFP 288
PFC NS+K + L S P
Sbjct: 263 PFCSNSFKARMRTLRSIP 210
>gb|CN821389.1|CN821389 HRO4424_G05_N10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_G05_N10, mRNA
sequence
Length = 761
Score = 24.4 bits (47), Expect = 9.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2 / -1
Query: 197 PPSLSDKQVVNCPLFAGTATRSICKFWSPF 286
PP L + C + ++ S+CK S F
Sbjct: 404 PPPLLSSPLPTCGVLRACSSASLCKMLSSF 315
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,578,637
Number of Sequences: 8143
Number of extensions: 56366
Number of successful extensions: 2491
Number of sequences better than 10.0: 85
length of database: 1,567,487
effective HSP length: 41
effective length of database: 1,233,624
effective search space used: 109792536
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)