BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM3d10.yg.2.1
(683 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF347064.1| Triticum aestivum sucrose-phosphate synthase... 539 e-152
gb|AF347065.1| Triticum aestivum sucrose-phosphate synthase... 539 e-152
gb|AF354298.1| Triticum aestivum sucrose-phosphate synthase... 502 e-140
gb|CA592908.1|CA592908 wpa1c.pk001.e2 wpa1c Triticum aestiv... 387 e-106
gb|BF201746.1|BF201746 WHE1765_B06_D11ZS Wheat pre-anthesis... 357 6e-097
gb|BF201050.1|BF201050 WHE0817-0821_K19_K19ZS Wheat vernali... 329 1e-088
gb|AL821250.1|AL821250 AL821250 p:133 Triticum aestivum cDN... 281 3e-074
gb|BJ271006.1|BJ271006 BJ271006 Y. Ogihara unpublished cDNA... 262 3e-068
gb|DR735371.1|DR735371 FGAS081041 Triticum aestivum FGAS: L... 216 2e-054
gb|BJ305731.1|BJ305731 BJ305731 Y. Ogihara unpublished cDNA... 101 6e-020
gb|AL827975.1|AL827975 AL827975 p:739 Triticum aestivum cDN... 100 2e-019
gb|CA500990.1|CA500990 WHE3203_H04_P07ZT Wheat meiotic anth... 92 6e-017
gb|BE415868.1|BE415868 MUG001.H05R990520 ITEC MUG Wheat Spi... 74 1e-011
gb|BE416741.1|BE416741 MUG012.G04R990616 ITEC MUG Wheat Spi... 74 1e-011
gb|BE417538.1|BE417538 MUG022.A09R990620 ITEC MUG Wheat Spi... 74 1e-011
gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase... 74 1e-011
gb|CV776602.1|CV776602 FGAS071006 Triticum aestivum FGAS: L... 72 6e-011
gb|BE417278.1|BE417278 MUG018.E11R990603 ITEC MUG Wheat Spi... 66 3e-009
gb|BJ317548.1|BJ317548 BJ317548 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BE406814.1|BE406814 WHE0432_d09_h18zS Wheat etiolated se... 62 5e-008
gb|CA609832.1|CA609832 wr1.pk0112.a8 wr1 Triticum aestivum ... 54 1e-005
gb|CA741331.1|CA741331 wia1c.pk001.d5 wia1c Triticum aestiv... 54 1e-005
gb|BQ239805.1|BQ239805 TaE05026E05R TaE05 Triticum aestivum... 52 5e-005
gb|AF347067.1| Triticum aestivum sucrose-phosphate synthase... 50 2e-004
>gb|AF347064.1| Triticum aestivum sucrose-phosphate synthase 2 mRNA, partial cds
Length = 3420
Score = 539 bits (272), Expect = e-152
Identities = 531/624 (85%)
Strand = Plus / Plus
Query: 35 ggaaactcagagcaagaataaggcgtggtgtgagctgctttggtcgtnanannnnnnnta 94
||||||| ||||||||||||| ||||||||| ||||||| ||||||| | | ||
Sbjct: 1053 ggaaacttagagcaagaataaagcgtggtgttagctgctatggtcgtgaaatgcctcgta 1112
Query: 95 tgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttgacctcg 154
|| || |||| |||||||| |||||||| || ||||||| || ||||||||||| || |
Sbjct: 1113 tggttccaattcctcctggtatggagttcagccatatagtgcctcatgatgttgatcttg 1172
Query: 155 acagtgaggaaggaaatggagatggctcaggttcaccagatccacctatttgggctgata 214
| ||||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||||
Sbjct: 1173 atagtgaagaagcgaatgaagttggctcagattcaccagatccacctgtttgggccgata 1232
Query: 215 taatgcgcttcttctcaaacccccggaagccaatgattcttgctcttgctcgtccggatc 274
|||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||||
Sbjct: 1233 taatgcgcttcttctcgaaccctcgcaagcccatgattctcgctcttgctcgtccagatc 1292
Query: 275 cgaagaagaatatcactactctagtcaaagcatttggtgaacatcgtgaactgagaaatt 334
| |||||||| |||||||| || || || |||||||||||||| | ||||||||||||||
Sbjct: 1293 ccaagaagaacatcactacgctggttaaggcatttggtgaacaccatgaactgagaaatt 1352
Query: 335 tagcaaatcttacactgatcatggggaatcgtgatgtcattgatgaaatgtcaagcacaa 394
||||||| ||||| |||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 1353 tagcaaaccttacgttgatcatgggtaaccgtgatgttattgatgaaatgtcaagcacaa 1412
Query: 395 atgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaag 454
||| |||||||||||| |||| ||||||||||||||| || |||||||||||||| ||||
Sbjct: 1413 atggagctgttttgacatcagtactcaagttaattgacaagtatgatctatatgggcaag 1472
Query: 455 tggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgcga 514
||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || |
Sbjct: 1473 tggcataccccaagcaccataagcaatctgaagttccagatatttatcgtctagcggcaa 1532
Query: 515 gaacaaaaggagtttttatcaattgtgcattggttgaaccatttggactcaccttgattg 574
||||||| || || ||||| || ||||| | ||||||||||||| ||||||||||| |
Sbjct: 1533 gaacaaagggggtgtttattaactgtgcttatattgaaccatttgggctcaccttgatcg 1592
Query: 575 aggntnnngcatatggtctacccatgnnnnncacccgaaatggtgggcctgtnnacatac 634
||| | || ||||||||||| ||| |||| ||||||||||||||| | ||||
Sbjct: 1593 aggctgctgcttatggtctacctatggttgctacccaaaatggtgggcctgtcgatatac 1652
Query: 635 atcgggttcttgataatggaattc 658
| ||||||||||| ||||| ||||
Sbjct: 1653 accgggttcttgacaatggcattc 1676
>gb|AF347065.1| Triticum aestivum sucrose-phosphate synthase 3 mRNA, partial cds
Length = 2469
Score = 539 bits (272), Expect = e-152
Identities = 531/624 (85%)
Strand = Plus / Plus
Query: 35 ggaaactcagagcaagaataaggcgtggtgtgagctgctttggtcgtnanannnnnnnta 94
||||||| ||||||||||||| ||||||||| ||||||| ||||||| | | ||
Sbjct: 81 ggaaacttagagcaagaataaagcgtggtgttagctgctatggtcgtgaaatgcctcgta 140
Query: 95 tgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttgacctcg 154
|| || |||| |||||||| |||||||| || ||||||| || ||||||||||| || |
Sbjct: 141 tggttccaattcctcctggtatggagttcagccatatagtgcctcatgatgttgatcttg 200
Query: 155 acagtgaggaaggaaatggagatggctcaggttcaccagatccacctatttgggctgata 214
| ||||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||||
Sbjct: 201 atagtgaagaagcgaatgaagttggctcagattcaccagatccacctgtttgggccgata 260
Query: 215 taatgcgcttcttctcaaacccccggaagccaatgattcttgctcttgctcgtccggatc 274
|||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||||
Sbjct: 261 taatgcgcttcttctcgaaccctcgcaagcccatgattctcgctcttgctcgtccagatc 320
Query: 275 cgaagaagaatatcactactctagtcaaagcatttggtgaacatcgtgaactgagaaatt 334
| |||||||| |||||||| || || || |||||||||||||| | ||||||||||||||
Sbjct: 321 ccaagaagaacatcactacgctggttaaggcatttggtgaacaccatgaactgagaaatt 380
Query: 335 tagcaaatcttacactgatcatggggaatcgtgatgtcattgatgaaatgtcaagcacaa 394
||||||| ||||| |||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 381 tagcaaaccttacgttgatcatgggtaaccgtgatgttattgatgaaatgtcaagcacaa 440
Query: 395 atgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaag 454
||| |||||||||||| |||| ||||||||||||||| || |||||||||||||| ||||
Sbjct: 441 atggagctgttttgacatcagtactcaagttaattgacaagtatgatctatatgggcaag 500
Query: 455 tggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgcga 514
||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || |
Sbjct: 501 tggcataccccaagcaccataagcaatctgaagttccagatatttatcgtctagcggcaa 560
Query: 515 gaacaaaaggagtttttatcaattgtgcattggttgaaccatttggactcaccttgattg 574
||||||| || || ||||| || ||||| | ||||||||||||| ||||||||||| |
Sbjct: 561 gaacaaagggggtgtttattaactgtgcttatattgaaccatttgggctcaccttgatcg 620
Query: 575 aggntnnngcatatggtctacccatgnnnnncacccgaaatggtgggcctgtnnacatac 634
||| | || ||||||||||| ||| |||| ||||||||||||||| | ||||
Sbjct: 621 aggctgctgcttatggtctacctatggttgctacccaaaatggtgggcctgtcgatatac 680
Query: 635 atcgggttcttgataatggaattc 658
| ||||||||||| ||||| ||||
Sbjct: 681 accgggttcttgacaatggcattc 704
>gb|AF354298.1| Triticum aestivum sucrose-phosphate synthase (SPS8) mRNA, partial
cds
Length = 2355
Score = 502 bits (253), Expect = e-140
Identities = 485/566 (85%)
Strand = Plus / Plus
Query: 93 tatgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttgacct 152
||||||| |||| ||||| || |||||||| || ||||||| || ||||||||||| ||
Sbjct: 30 tatgattccaattcctcccggtatggagttcagccatatagtgcctcatgatgttgatct 89
Query: 153 cgacagtgaggaaggaaatggagatggctcaggttcaccagatccacctatttgggctga 212
|| ||||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||
Sbjct: 90 tgatagtgaagaagcgaatgaagttggctcagattcaccagatccacctgtttgggccga 149
Query: 213 tataatgcgcttcttctcaaacccccggaagccaatgattcttgctcttgctcgtccgga 272
|||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||
Sbjct: 150 tataatgcgcttcttctcgaaccctcgcaagcccatgattctcgctcttgctcgtccaga 209
Query: 273 tccgaagaagaatatcactactctagtcaaagcatttggtgaacatcgtgaactgagaaa 332
||| |||||||| |||||||| || || || |||||||||||||| | ||| || |||||
Sbjct: 210 tcccaagaagaacatcactacgctggttaaggcatttggtgaacaccatgagctaagaaa 269
Query: 333 tttagcaaatcttacactgatcatggggaatcgtgatgtcattgatgaaatgtcaagcac 392
||||||||| |||||| |||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 270 tttagcaaaccttacattgatcatgggtaaccgtgatgttattgatgaaatgtcaagcac 329
Query: 393 aaatgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggaca 452
||||| |||||||||||| |||| ||||||||||||||| || |||||||||||||| ||
Sbjct: 330 aaatggagctgttttgacatcagtactcaagttaattgacaagtatgatctatatgggca 389
Query: 453 agtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgc 512
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 390 agtggcataccccaagcaccataagcaatctgaagttccagatatttatcgtttagcggc 449
Query: 513 gagaacaaaaggagtttttatcaattgtgcattggttgaaccatttggactcaccttgat 572
|||||||| || || ||||| || ||||| | ||||||||||||| |||||||||||
Sbjct: 450 aagaacaaagggggtgtttattaactgtgcttatattgaaccatttgggctcaccttgat 509
Query: 573 tgaggntnnngcatatggtctacccatgnnnnncacccgaaatggtgggcctgtnnacat 632
|||| | || ||||||||||| ||| |||| ||||||||| ||||| | ||
Sbjct: 510 cgaggctgctgcttatggtctacctatggttgctacccaaaatggtggacctgtcgatat 569
Query: 633 acatcgggttcttgataatggaattc 658
||| ||||||||||| ||||| ||||
Sbjct: 570 acaccgggttcttgacaatggcattc 595
>gb|CA592908.1|CA592908 wpa1c.pk001.e2 wpa1c Triticum aestivum cDNA clone wpa1c.pk001.e2 5'
end, mRNA sequence
Length = 471
Score = 387 bits (195), Expect = e-106
Identities = 382/445 (85%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 49 agaataaggcgtggtgtgagctgctttggtcgtnanannnnnnntatgattgcaatccct 108
||||||| ||||||||| ||||||| ||||||| | | |||| || |||| |||
Sbjct: 8 agaataaagcgtggtgttagctgctatggtcgtgaaatgcctcgtatggttccaattcct 67
Query: 109 cctggcatggagtttagtcatatagcaccacatgatgttgacctcgacagtgaggaagga 168
||||| |||||||| || ||||||| || ||||||||||| || || ||||| ||||
Sbjct: 68 cctggtatggagttcagccatatagtgcctcatgatgttgatcttgatagtgaagaagcg 127
Query: 169 aatggagatggctcaggttcaccagatccacctatttgggctgatataatgcgcttcttc 228
|||| || |||||||| |||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 128 aatgaagttggctcagattcaccagatccacctgtttgggccgatataatgcgcttcttc 187
Query: 229 tcaaacccccggaagccaatgattcttgctcttgctcgtccggatccgaagaagaatatc 288
|| ||||| || ||||| |||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 188 tcgaaccctcgcaagcccatgattctcgctcttgctcgtccagatcccaagaagaacatc 247
Query: 289 actactctagtcaaagcatttggtgaacatcgtgaactgagaaatttagcaaatcttaca 348
||||| || || || |||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 248 actacgctggttaaggcatttggtgaacaccatgaactgagaaatttagcaaaccttacg 307
Query: 349 ctgatcatggggaa-tcgtgatgtcattgatgaaatgtcaagcacaaatgcagctgtttt 407
|||||||||| || |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 308 ttgatcatgggtaacccgtgatgttattgatgaaatgtcaagcacaaatggagctgtttt 367
Query: 408 gacttcagcactc-aagttaattgataaatatgatctatatggacaagtggcatacccca 466
||| |||| |||| ||||||||||| || ||||||||| | || ||||||||||||||||
Sbjct: 368 gacatcagtactcaaagttaattgacaagtatgatctaaangggcaagtggcatacccca 427
Query: 467 agcaccataagcaatctgaagttcc 491
|||||||||||||||| ||||||||
Sbjct: 428 agcaccataagcaatccgaagttcc 452
>gb|BF201746.1|BF201746 WHE1765_B06_D11ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1765_B06_D11, mRNA sequence
Length = 378
Score = 357 bits (180), Expect = 6e-097
Identities = 324/372 (87%)
Strand = Plus / Plus
Query: 93 tatgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttgacct 152
||||||| |||| ||||| || |||||||| || ||||||| || ||||||||||| ||
Sbjct: 7 tatgattccaattcctcccggtatggagttcagccatatagtgcctcatgatgttgatct 66
Query: 153 cgacagtgaggaaggaaatggagatggctcaggttcaccagatccacctatttgggctga 212
|| ||||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||
Sbjct: 67 tgatagtgaagaagcgaatgaagttggctcagattcaccagatccacctgtttgggccga 126
Query: 213 tataatgcgcttcttctcaaacccccggaagccaatgattcttgctcttgctcgtccgga 272
|||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||
Sbjct: 127 tataatgcgcttcttctcgaaccctcgcaagcccatgattctcgctcttgctcgtccaga 186
Query: 273 tccgaagaagaatatcactactctagtcaaagcatttggtgaacatcgtgaactgagaaa 332
||| |||||||| |||||||| || || || |||||||||||||| | ||| || |||||
Sbjct: 187 tcccaagaagaacatcactacgctggttaaggcatttggtgaacaccatgagctaagaaa 246
Query: 333 tttagcaaatcttacactgatcatggggaatcgtgatgtcattgatgaaatgtcaagcac 392
||||||||| |||||| |||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 247 tttagcaaaccttacattgatcatgggtaaccgtgatgttattgatgaaatgtcaagcac 306
Query: 393 aaatgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggaca 452
||||| |||||||||||| |||| ||||||||||||||| || |||||||||||||| ||
Sbjct: 307 aaatggagctgttttgacatcagtactcaagttaattgacaagtatgatctatatgggca 366
Query: 453 agtggcataccc 464
|||||| |||||
Sbjct: 367 agtggcgtaccc 378
>gb|BF201050.1|BF201050 WHE0817-0821_K19_K19ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0817-0821_K19_K19, mRNA sequence
Length = 444
Score = 329 bits (166), Expect = 1e-088
Identities = 321/376 (85%)
Strand = Plus / Plus
Query: 35 ggaaactcagagcaagaataaggcgtggtgtgagctgctttggtcgtnanannnnnnnta 94
||||||| ||||||||||||| ||||||||| ||||||| ||||||| | | ||
Sbjct: 66 ggaaacttagagcaagaataaagcgtggtgttagctgctatggtcgtgaaatgcctcgta 125
Query: 95 tgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttgacctcg 154
|| || |||| |||||||| |||||||| || ||||||| || ||||||||||| || |
Sbjct: 126 tggttccaattcctcctggtatggagttcagccatatagtgcctcatgatgttgatcttg 185
Query: 155 acagtgaggaaggaaatggagatggctcaggttcaccagatccacctatttgggctgata 214
| ||||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||||
Sbjct: 186 atagtgaagaagcgaatgaagttggctcagattcaccagatccacctgtttgggccgata 245
Query: 215 taatgcgcttcttctcaaacccccggaagccaatgattcttgctcttgctcgtccggatc 274
|||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||||
Sbjct: 246 taatgcgcttcttctcgaaccctcgcaagcccatgattctcgctcttgctcgtccagatc 305
Query: 275 cgaagaagaatatcactactctagtcaaagcatttggtgaacatcgtgaactgagaaatt 334
| |||||||| |||||||| || || || |||||||||||||| | ||||||||||||||
Sbjct: 306 ccaagaagaacatcactacgctggttaaggcatttggtgaacaccatgaactgagaaatt 365
Query: 335 tagcaaatcttacactgatcatggggaatcgtgatgtcattgatgaaatgtcaagcacaa 394
|| |||| ||||| |||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 366 tancaaaccttacgttgatcatgggtaaccgtgatgttattgatgaaatgtcaagcacaa 425
Query: 395 atgcagctgttttgac 410
||| ||||||||||||
Sbjct: 426 atggagctgttttgac 441
>gb|AL821250.1|AL821250 AL821250 p:133 Triticum aestivum cDNA clone B09_p133_plate_6, mRNA
sequence
Length = 465
Score = 281 bits (142), Expect = 3e-074
Identities = 254/295 (86%)
Strand = Plus / Plus
Query: 364 cgtgatgtcattgatgaaatgtcaagcacaaatgcagctgttttgacttcagcactcaag 423
|||||||| ||||||||||||||||||||||||| |||||||||||| |||| |||||||
Sbjct: 4 cgtgatgttattgatgaaatgtcaagcacaaatggagctgttttgacatcagtactcaag 63
Query: 424 ttaattgataaatatgatctatatggacaagtggcataccccaagcaccataagcaatct 483
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64 ttaattgacaagtatgatctatatgggcaagtggcataccccaagcaccataagcaatct 123
Query: 484 gaagttcctgatatttatcgtttagctgcgagaacaaaaggagtttttatcaattgtgca 543
|||||||| ||||||||||||||||| || |||||||| || || ||||| || |||||
Sbjct: 124 gaagttccagatatttatcgtttagcggcaagaacaaagggggtgtttattaactgtgct 183
Query: 544 ttggttgaaccatttggactcaccttgattgaggntnnngcatatggtctacccatgnnn 603
| ||||||||||||| ||||||||||| |||| | || ||||||||||| |||
Sbjct: 184 tatattgaaccatttgggctcaccttgatcgaggctgctgcttatggtctacctatggtt 243
Query: 604 nncacccgaaatggtgggcctgtnnacatacatcgggttcttgataatggaattc 658
|||| ||||||||| ||||| | ||||| ||||||||||| ||||| ||||
Sbjct: 244 gctacccaaaatggtggacctgtcgatatacaccgggttcttgacaatggcattc 298
>gb|BJ271006.1|BJ271006 BJ271006 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh23k22 5', mRNA sequence
Length = 645
Score = 262 bits (132), Expect = 3e-068
Identities = 235/273 (86%)
Strand = Plus / Plus
Query: 386 caagcacaaatgcagctgttttgacttcagcactcaagttaattgataaatatgatctat 445
|||||||||||| |||||||||||| |||| ||||||||||||||| || ||||||||||
Sbjct: 2 caagcacaaatggagctgttttgacatcagtactcaagttaattgacaagtatgatctat 61
Query: 446 atggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtt 505
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 atgggcaagtggcataccccaagcaccataagcaatctgaagttccagatatttatcgtt 121
Query: 506 tagctgcgagaacaaaaggagtttttatcaattgtgcattggttgaaccatttggactca 565
|||| || |||||||| || || ||||| || ||||| | ||||||||||||| ||||
Sbjct: 122 tagcggcaagaacaaagggggtgtttattaactgtgcttatattgaaccatttgggctca 181
Query: 566 ccttgattgaggntnnngcatatggtctacccatgnnnnncacccgaaatggtgggcctg 625
|||||||||||| | || ||||||||||| ||| |||| ||||||||||||||
Sbjct: 182 ccttgattgaggctgctgcttatggtctacctatggttgctacccaaaatggtgggcctg 241
Query: 626 tnnacatacatcgggttcttgataatggaattc 658
| | ||||| ||||||||||| ||||| ||||
Sbjct: 242 ttgatatacaccgggttcttgacaatggcattc 274
>gb|DR735371.1|DR735371 FGAS081041 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 1152
Score = 216 bits (109), Expect = 2e-054
Identities = 215/254 (84%)
Strand = Plus / Plus
Query: 405 tttgacttcagcactcaagttaattgataaatatgatctatatggacaagtggcataccc 464
|||||| |||| ||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 29 tttgacatcagtactcaagttaattgacaagtatgatctatatgggcaagtggcataccc 88
Query: 465 caagcaccataagcaatctgaagttcctgatatttatcgtttagctgcgagaacaaaagg 524
||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 89 caagcaccataagcaatctgaagttccagatatttatcgtttagcggcaagaacaaaggg 148
Query: 525 agtttttatcaattgtgcattggttgaaccatttggactcaccttgattgaggntnnngc 584
|| ||||| || ||||| | | ||||||||||| || ||||||||||||| | ||
Sbjct: 149 ggtgtttattaactgtgcttatatcgaaccatttgggcttaccttgattgaggctgctgc 208
Query: 585 atatggtctacccatgnnnnncacccgaaatggtgggcctgtnnacatacatcgggttct 644
||||||||||| ||| |||| ||||||||||||||| | ||||| ||||||||
Sbjct: 209 ttatggtctacctatggttgctacccaaaatggtgggcctgtcgatatacaccgggttct 268
Query: 645 tgataatggaattc 658
||| ||||| ||||
Sbjct: 269 tgacaatggcattc 282
>gb|BJ305731.1|BJ305731 BJ305731 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd27e03 5', mRNA sequence
Length = 506
Score = 101 bits (51), Expect = 6e-020
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 396 tgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaagt 455
||||||||||||||| |||| ||| | || |||||| |||||||| | ||||| |||||
Sbjct: 251 tgcagctgttttgacatcagtacttacattgattgatgaatatgatttgtatggtcaagt 310
Query: 456 ggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgcgag 515
||||||||| ||||| || || || || ||||||| |||||||||||||||||| |||||
Sbjct: 311 ggcatacccaaagcatcacaaacactcagaagttcttgatatttatcgtttagcagcgag 370
Query: 516 aac 518
|||
Sbjct: 371 aac 373
>gb|AL827975.1|AL827975 AL827975 p:739 Triticum aestivum cDNA clone C10_p739_plate_4, mRNA
sequence
Length = 590
Score = 99.6 bits (50), Expect = 2e-019
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 396 tgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaagt 455
||||||||||||||| |||| ||| | || |||||| |||||||| | ||||| | |||
Sbjct: 176 tgcagctgttttgacatcagtacttacattgattgatgaatatgatttgtatggtccagt 235
Query: 456 ggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgcgag 515
||||||||| ||||| || || || || ||||||| |||||||||||||||||| |||||
Sbjct: 236 ggcatacccaaagcatcacaaacactcggaagttcttgatatttatcgtttagcagcgag 295
Query: 516 aacaaa 521
||||||
Sbjct: 296 aacaaa 301
>gb|CA500990.1|CA500990 WHE3203_H04_P07ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3203_H04_P07, mRNA sequence
Length = 436
Score = 91.7 bits (46), Expect = 6e-017
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 396 tgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaagt 455
||||||||||||||| |||| ||| | || |||||| |||||||| | ||||| |||||
Sbjct: 161 tgcagctgttttgacatcagtacttacattgattgatgaatatgatttgtatggtcaagt 220
Query: 456 ggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagctgcgag 515
||||||||| ||||| || || || || ||||||| |||||||||||||||| | ||||
Sbjct: 221 ggcatacccaaagcatcacaaacactcagaagttcttgatatttatcgtttaacaacgag 280
Query: 516 aacaaa 521
||||||
Sbjct: 281 aacaaa 286
>gb|BE415868.1|BE415868 MUG001.H05R990520 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG001.H05, mRNA sequence
Length = 772
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 445 tatggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgt 504
||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 39 tatggtcaagtggcataccccaagcatcacaagcactctgaagttcctgacatttactgt 98
Query: 505 ttagc 509
|||||
Sbjct: 99 ttagc 103
>gb|BE416741.1|BE416741 MUG012.G04R990616 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG012.G04, mRNA sequence
Length = 933
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 445 tatggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgt 504
||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 39 tatggtcaagtggcataccccaagcatcacaagcactctgaagttcctgacatttactgt 98
Query: 505 ttagc 509
|||||
Sbjct: 99 ttagc 103
>gb|BE417538.1|BE417538 MUG022.A09R990620 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG022.A09, mRNA sequence
Length = 440
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 445 tatggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgt 504
||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 39 tatggtcaagtggcataccccaagcatcacaagcactctgaagttcctgacatttactgt 98
Query: 505 ttagc 509
|||||
Sbjct: 99 ttagc 103
>gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mRNA, complete cds
Length = 3339
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 445 tatggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgt 504
||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||
Sbjct: 1697 tatggtcaagtggcataccccaagcatcacaagcactctgaagttcctgacatttactgt 1756
Query: 505 ttagc 509
|||||
Sbjct: 1757 ttagc 1761
Score = 44.1 bits (22), Expect = 0.012
Identities = 97/122 (79%)
Strand = Plus / Plus
Query: 193 gatccacctatttgggctgatataatgcgcttcttctcaaacccccggaagccaatgatt 252
||||| ||||| ||| || | |||||||||||||| |||| || |||||||| ||||||
Sbjct: 1445 gatccgcctatctggtctcagataatgcgcttctttacaaatcctcggaagcctatgatt 1504
Query: 253 cttgctcttgctcgtccggatccgaagaagaatatcactactctagtcaaagcatttggt 312
| ||| |||| ||||| |||| | |||||||| || || || || || |||||||||
Sbjct: 1505 ttggctgttgcccgtccatatcctgaaaagaatataacaacacttgtaaaggcatttggt 1564
Query: 313 ga 314
||
Sbjct: 1565 ga 1566
>gb|CV776602.1|CV776602 FGAS071006 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 71.9 bits (36), Expect = 6e-011
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 451 caagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgtttagct 510
|||||||||||||| ||||| || || || || ||||||| ||||||||||||||||||
Sbjct: 109 caagtggcatacccaaagcatcacaaacactcagaagttcttgatatttatcgtttagca 168
Query: 511 gcgagaac 518
||||||||
Sbjct: 169 gcgagaac 176
>gb|BE417278.1|BE417278 MUG018.E11R990603 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG018.E11, mRNA sequence
Length = 580
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 445 tatggacaagtggcataccccaagcaccataagcaatctgaagttcctgatatttatcgt 504
||||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||
Sbjct: 38 tatggtcaagtggcataccccaagcatcacaagcactctgaagtgcctgacatttactgt 97
Query: 505 ttagc 509
|||||
Sbjct: 98 ttagc 102
>gb|BJ317548.1|BJ317548 BJ317548 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf28l19 5', mRNA sequence
Length = 684
Score = 63.9 bits (32), Expect = 1e-008
Identities = 92/115 (80%)
Strand = Plus / Plus
Query: 35 ggaaactcagagcaagaataaggcgtggtgtgagctgctttggtcgtnanannnnnnnta 94
||||||| ||||||||||||| ||||||||| ||||||| |||||| | | ||
Sbjct: 554 ggaaacttagagcaagaataaagcgtggtgttagctgctacggtcgtgaaatgcctcgta 613
Query: 95 tgattgcaatccctcctggcatggagtttagtcatatagcaccacatgatgttga 149
||||| |||| ||||| || |||||||| || ||||||| || |||||||||||
Sbjct: 614 tgattccaattcctcccggtatggagttcagccatatagtgcctcatgatgttga 668
>gb|BE406814.1|BE406814 WHE0432_d09_h18zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0432_d09_h18, mRNA
sequence
Length = 132
Score = 61.9 bits (31), Expect = 5e-008
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 396 tgcagctgttttgacttcagcactcaagttaattgataaatatgatctatatggacaagt 455
||||||||||||||| |||| ||| | || |||||| |||||||| | ||||| |||||
Sbjct: 41 tgcagctgttttgacatcagtacttacattgattgatgaatatgatttgtatggtcaagt 100
Query: 456 ggcataccccaagca 470
||||||||| |||||
Sbjct: 101 ggcatacccaaagca 115
>gb|CA609832.1|CA609832 wr1.pk0112.a8 wr1 Triticum aestivum cDNA clone wr1.pk0112.a8 5'
end, mRNA sequence
Length = 657
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 484 gaagttcctgatatttatcgtttagctgcgagaac 518
||||||| |||||||||||||||||| ||||||||
Sbjct: 17 gaagttcttgatatttatcgtttagcagcgagaac 51
>gb|CA741331.1|CA741331 wia1c.pk001.d5 wia1c Triticum aestivum cDNA clone wia1c.pk001.d5 5'
end, mRNA sequence
Length = 540
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 277 aagaagaatatcactactctagtcaaagcatttgg 311
|||||||| ||||||||||| ||||||||||||||
Sbjct: 68 aagaagaacatcactactcttgtcaaagcatttgg 102
>gb|BQ239805.1|BQ239805 TaE05026E05R TaE05 Triticum aestivum cDNA clone TaE05026E05R, mRNA
sequence
Length = 537
Score = 52.0 bits (26), Expect = 5e-005
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 607 acccgaaatggtgggcctgtnnacatacatcgggttcttgataatggaattc 658
|||| ||||||||||||||| | ||||| ||||||||||| ||||| ||||
Sbjct: 38 acccaaaatggtgggcctgtcgatatacaccgggttcttgacaatggcattc 89
>gb|AF347067.1| Triticum aestivum sucrose-phosphate synthase 5 mRNA, partial cds
Length = 1999
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 275 cgaagaagaatatcactactctagtcaaagcatttgg 311
|||||||||| ||||||||||| || |||||||||||
Sbjct: 24 cgaagaagaacatcactactcttgtgaaagcatttgg 60
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 102,148
Number of Sequences: 636343
Number of extensions: 102148
Number of successful extensions: 28040
Number of sequences better than 0.5: 24
Number of HSP's better than 0.5 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27996
Number of HSP's gapped (non-prelim): 34
length of query: 683
length of database: 367,240,239
effective HSP length: 19
effective length of query: 664
effective length of database: 355,149,722
effective search space: 235819415408
effective search space used: 235819415408
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)