BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF25f04.yg.3.3
(1599 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA486789.1|CA486789 WHE4336_A01_B02ZS Wheat meiotic anth... 575 e-162
gb|CA484299.1|CA484299 WHE4304_G08_N16ZS Wheat meiotic anth... 505 e-141
gb|CA741775.1|CA741775 wia1c.pk003.d24 wia1c Triticum aesti... 410 e-112
gb|CK153518.1|CK153518 FGAS032143 Triticum aestivum FGAS: T... 400 e-109
gb|CD928987.1|CD928987 GR45.106K06F010319 GR45 Triticum aes... 381 e-103
gb|CA487127.1|CA487127 WHE4340_H06_P12ZS Wheat meiotic anth... 361 1e-097
gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis,... 268 1e-069
gb|CN010131.1|CN010131 WHE3867_A10_A19ZS Wheat Fusarium gra... 260 3e-067
gb|CD900693.1|CD900693 G356.101H03R011023 G356 Triticum aes... 244 2e-062
gb|CD900692.1|CD900692 G356.101H03F010906 G356 Triticum aes... 232 6e-059
gb|CA502596.1|CA502596 WHE4302_D05_G10ZS Wheat meiotic anth... 218 9e-055
gb|CD928988.1|CD928988 GR45.106K06R010611 GR45 Triticum aes... 218 9e-055
gb|DR733347.1|DR733347 FGAS079106 Triticum aestivum FGAS: L... 214 1e-053
gb|BQ842661.1|BQ842661 WHE2996_C01_E02ZS Wheat dormant embr... 196 3e-048
gb|CK153666.1|CK153666 FGAS032314 Triticum aestivum FGAS: T... 192 5e-047
gb|CD870461.1|CD870461 AZO2.114I02F010115 AZO2 Triticum aes... 186 3e-045
gb|CA641677.1|CA641677 wre1n.pk0047.b2 wre1n Triticum aesti... 163 5e-038
gb|BE400978.1|BE400978 AWB009.D11F000328 ITEC AWB Wheat Mei... 151 2e-034
gb|CA717265.1|CA717265 wdk4c.pk005.d16 wdk4c Triticum aesti... 40 0.46
>gb|CA486789.1|CA486789 WHE4336_A01_B02ZS Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4336_A01_B02, mRNA sequence
Length = 649
Score = 575 bits (290), Expect = e-162
Identities = 550/639 (86%)
Strand = Plus / Plus
Query: 448 atatttgaggctgttttccagtgcacccttgagatgattactaagaactttgaagattat 507
||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 2 atatttgaggctgttttccagagcactcttgagatgatcactaaaaactttgaagattac 61
Query: 508 cctgagcaccgcctcaaannnnnnnctttgcttcgtgcaattggcacccattgcttccaa 567
|| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 62 ccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccattgcttccaa 121
Query: 568 gcattaatccagctttcaagtcagcaattgaagcttgtgatcgattcaattaattgggcg 627
|||||||| ||||||||||||||||||||||| |||||||| || || || || |||||
Sbjct: 122 gcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatcaactgggca 181
Query: 628 ttcagacatacagagagaaatattgcagagactggccttagcctgttgttggagatcttg 687
|| ||||||||||||||||| || ||||||||||| || || || ||| |||| || ||
Sbjct: 182 tttagacatacagagagaaacatcgcagagactggtctgagtctattgctggaaatttta 241
Query: 688 aaaaaattccaggcttcaggattccaaaaccaattctacaaaacctactttttgacaatt 747
|| || || ||||| |||||||||||||| |||||||||||||| || ||||||| |||
Sbjct: 242 aagaactttcaggcctcaggattccaaaatcaattctacaaaacttattttttgaatatt 301
Query: 748 gagcaagagatttttgcagtcctcacagacacattccataaacctggtttcaagcttcat 807
|| |||||||| |||||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 302 gaacaagagatctttgcagttctgacagacacattccacaagcctggtttcaagcttcat 361
Query: 808 gtttcggtgctacaacacttgttttgtgcggttgatggtctaacggagcctctatgggac 867
|||| |||||| || ||||| ||||||| |||||||||||| ||||||||||| |||||
Sbjct: 362 gttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcctctctgggat 421
Query: 868 gcgtcttctgtaccatatcaatatacggataatgccatgtttgttcgagattacaccata 927
|| || || |||||||| |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 422 gcatcctcagtaccataccaatatactgacaacgctatgtttgtccgagattacacaata 481
Query: 928 aaactcttaggaacatcatttcctaacatgactgtagctgaggtgaccaagtttgtggat 987
||||| ||||| |||||||||| |||||||| ||||||| || || ||||| |||
Sbjct: 482 aaacttttaggttcatcatttcccaacatgacacctactgaggttacaaaatttgttgat 541
Query: 988 ggccttcttagttcaaaacttgatcttccgagcttcaaaaaccatattagagatttcctg 1047
|| |||||||||||||||| ||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 542 gggcttcttagttcaaaacatgaccttccaagcttcaaaaaccatattagggatttcctg 601
Query: 1048 gtgcagtcgaaggagttctcagctcaggataacaaggat 1086
||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 602 gtgcaatcaaaggagttctcggctcaggataataaggat 640
>gb|CA484299.1|CA484299 WHE4304_G08_N16ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4304_G08_N16, mRNA sequence
Length = 580
Score = 505 bits (255), Expect = e-141
Identities = 491/572 (85%)
Strand = Plus / Plus
Query: 214 tttgtaaaactcttgagatctgtcaagagggaaaccctaaagttgatcgagacttttgtg 273
|||||||||||| | |||||||||||||||||||| | || ||||| ||||||||||||
Sbjct: 1 tttgtaaaactccttagatctgtcaagagggaaacattgaaattgattgagacttttgtg 60
Query: 274 gacaaggcggaagatttgccacatgtaggaaagcagtttgtaccaccaatgatggatcct 333
||||| || |||||| | ||||| | || || |||||||| || || ||||||||||||
Sbjct: 61 gacaaagctgaagatctaccacacattgggaaacagtttgttcctcctatgatggatcct 120
Query: 334 gttcttggtgattatgctagaaatgtacccgatgcaagggagtctgaagttctgtccttg 393
|||||| ||| |||||||||||||| |||||||| ||||| ||||||||||||||| ||
Sbjct: 121 attcttgctgactatgctagaaatgttcccgatgctagggaatctgaagttctgtccctg 180
Query: 394 tttgcaacaatcattaacaagtacaaaggggaaatgcttgaggatgtgcctcgtatattt 453
||||| || ||||| ||||| |||||||| ||||||||||| || |||||||| ||||||
Sbjct: 181 tttgcgacgatcataaacaaatacaaaggtgaaatgcttgaagacgtgcctcgcatattt 240
Query: 454 gaggctgttttccagtgcacccttgagatgattactaagaactttgaagattatcctgag 513
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||| || |||
Sbjct: 241 gaggctgttttccagtgcactcttgagatgatcactaaaaactttgaagattacccggag 300
Query: 514 caccgcctcaaannnnnnnctttgcttcgtgcaattggcacccattgcttccaagcatta 573
|| ||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 catcgcctcaaatttttctctttgcttcgtgcgattggcacccattgcttccaagcatta 360
Query: 574 atccagctttcaagtcagcaattgaagcttgtgatcgattcaattaattgggcgttcaga 633
|| ||||||||||||||||||||||| |||||||| || || || || ||||| || |||
Sbjct: 361 attcagctttcaagtcagcaattgaaacttgtgattgactctatcaactgggcatttaga 420
Query: 634 catacagagagaaatattgcagagactggccttagcctgttgttggagatcttgaaaaaa 693
||||||||||||| || ||||||||||| || || || ||| |||| || || || ||
Sbjct: 421 catacagagagaatcatcgcagagactggtctgagtctattgctggaaattttaaagaac 480
Query: 694 ttccaggcttcaggattccaaaaccaattctacaaaacctactttttgacaattgagcaa 753
|| ||||| |||||||||||||| |||||||||||||| || ||||||| ||||| |||
Sbjct: 481 tttcaggcctcaggattccaaaatcaattctacaaaacttattttttgaatattgaacaa 540
Query: 754 gagatttttgcagtcctcacagacacattcca 785
||||| |||||||| || ||||||||||||||
Sbjct: 541 gagatctttgcagttctgacagacacattcca 572
>gb|CA741775.1|CA741775 wia1c.pk003.d24 wia1c Triticum aestivum cDNA clone wia1c.pk003.d24
5' end, mRNA sequence
Length = 632
Score = 410 bits (207), Expect = e-112
Identities = 392/456 (85%)
Strand = Plus / Plus
Query: 411 caagtacaaaggggaaatgcttgaggatgtgcctcgtatatttgaggctgttttccagtg 470
||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 9 caagtacaaagctgaaatgcttgatgatgtgcctcgtatattcgaggctgttttccagtg 68
Query: 471 cacccttgagatgattactaagaactttgaagattatcctgagcaccgcctcaaannnnn 530
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 tactcttgagatgattactaaaaactttgaagattatcctgagcaccgcctcaagttttt 128
Query: 531 nnctttgcttcgtgcaattggcacccattgcttccaagcattaatccagctttcaagtca 590
|||| |||||||| || ||||||||||||||| |||| ||||| |||||||| || ||
Sbjct: 129 ctctttacttcgtgctatcggcacccattgcttcaaagctttaattcagctttccagcca 188
Query: 591 gcaattgaagcttgtgatcgattcaattaattgggcgttcagacatacagagagaaatat 650
|||||||||||||||||| ||||| || || ||||| || ||||||||||||||||| ||
Sbjct: 189 gcaattgaagcttgtgattgattcgatcaactgggcatttagacatacagagagaaacat 248
Query: 651 tgcagagactggccttagcctgttgttggagatcttgaaaaaattccaggcttcaggatt 710
||| |||||||| ||||| || || ||||| || |||| || || |||||||||| |||
Sbjct: 249 tgccgagactggtcttagtcttttattggaaattctgaagaattttcaggcttcagaatt 308
Query: 711 ccaaaaccaattctacaaaacctactttttgacaattgagcaagagatttttgcagtcct 770
| || || ||||||||||| || |||||||| || ||||| |||||||||||||| ||
Sbjct: 309 cacgaatcagttctacaaaacatattttttgactatagagcaggagatttttgcagttct 368
Query: 771 cacagacacattccataaacctggtttcaagcttcatgtttcggtgctacaacacttgtt 830
|||||| |||| ||||| ||||| ||||| |||||||||| ||||||||||||||||||
Sbjct: 369 cacagattcatttcataagcctggcttcaaacttcatgttttggtgctacaacacttgtt 428
Query: 831 ttgtgcggttgatggtctaacggagcctctatggga 866
||||| ||||||||| ||||| || |||||||||||
Sbjct: 429 ttgtgtggttgatggcctaactgaacctctatggga 464
Score = 54.0 bits (27), Expect = 3e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 897 taatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacat 956
||||||||||||||| || || ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 489 taatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacat 548
Query: 957 gac 959
|||
Sbjct: 549 gac 551
>gb|CK153518.1|CK153518 FGAS032143 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA, mRNA
sequence
Length = 913
Score = 400 bits (202), Expect = e-109
Identities = 585/710 (82%), Gaps = 10/710 (1%)
Strand = Plus / Plus
Query: 478 gagatgattactaagaactttgaagattatcctgagcaccgcctcaaannnnnnnctttg 537
|||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 164 gagatgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctcttta 223
Query: 538 cttcgtgcaattggcacccattgcttccaagcattaatccagctttcaagtcagcaattg 597
|||||||| || ||||||||||||||| ||| ||||| ||| |||| || |||||||||
Sbjct: 224 cttcgtgctatcggcacccattgcttcaaagttttaattcagttttccagccagcaattg 283
Query: 598 aagcttgtgatcgattcaattaattgggcgttcagacatacagagagaaatattgcagag 657
||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 284 aagcttgtgattgattcgattaactgggcatttagacatacagagagaaacattgccgag 343
Query: 658 actggccttagcctgttgttggagatcttgaaaaaattccaggcttcaggattccaaaac 717
||||| ||||| || |||||||| || |||| || || |||||||||| |||| ||
Sbjct: 344 actggtcttagtcttttgttggaaattctgaagaattttcaggcttcagaattcacgaat 403
Query: 718 caattctacaaaacctactttttgacaattgagcaagagatttttgcagtcctcacagac 777
|| ||||||||||| || |||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 404 cagttctacaaaacatattttttgactatagagcaggagatttttgcagttctcacagat 463
Query: 778 acattccataaacctggtttcaagcttcatgtttcggtgctacaacacttgttttgtgcg 837
|||| ||||| || || ||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 464 tcatttcataagcccggcttcaaacttcatgttttggtgctacaacacttgttttgtgtg 523
Query: 838 gttgatggtctaacggagcctctatgggacgcgtcttctgtaccatatcaatatacggat 897
|||||||| | || || ||||||||||| || || | ||| |||||| || |
Sbjct: 524 gttgatggccctactgaacctctatgggatgcatccacggtatcatatccat------ct 577
Query: 898 aatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacatg 957
|||||||||||||| || || ||||| || ||||| | ||| |||||||||||||||||
Sbjct: 578 aatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacatg 637
Query: 958 actgtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttccg 1017
|| | ||||||||||||||||||||| ||||| |||||| |||| | || || || ||
Sbjct: 638 acggcagctgaggtgaccaagtttgttgatgggcttcttggttcgagacatggactcccc 697
Query: 1018 agcttcaaaaaccatattagagatttcctggtgcagtcgaaggagttctcagctcaggat 1077
||||| ||||||||||||| || ||||||||||| || |||||| ||||||| | |||
Sbjct: 698 agctttcaaaaccatattagggacttcctggtgcattcaaaggag-tctcagccccagat 756
Query: 1078 aacaaggatctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaatg 1137
|| ||||||| || |||||||||||||| | |||||||||| | | ||| |||||||
Sbjct: 757 -accaggatctgtatgcggaagaggctgcggtacaaagagaaaagaaaggcc-acgaatg 814
Query: 1138 cttgccattccggggctgattgcccctagcgaattgcaagacgagatggt 1187
|||||||| ||||||||| ||| ||| |||| ||||| ||| ||||||||
Sbjct: 815 cttgccatcccggggctggttggccccagcg-attgcgagatgagatggt 863
>gb|CD928987.1|CD928987 GR45.106K06F010319 GR45 Triticum aestivum cDNA clone GR45106K06, mRNA
sequence
Length = 564
Score = 381 bits (192), Expect = e-103
Identities = 407/479 (84%), Gaps = 6/479 (1%)
Strand = Plus / Plus
Query: 721 ttctacaaaacctactttttgacaattgagcaagagatttttgcagtcctcacagacaca 780
||||||||||| || |||||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 2 ttctacaaaacatattttttgactatagagcaggagatttttgcagttctcacagattca 61
Query: 781 ttccataaacctggtttcaagcttcatgtttcggtgctacaacacttgttttgtgcggtt 840
|| ||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||
Sbjct: 62 tttcataagcctggcttcaaacttcatgttttggtgctacaacacttgttttgtgtggtt 121
Query: 841 gatggtctaacggagcctctatgggacgcgtcttctgtaccatatcaatatacggataat 900
||||| ||||| || ||||||||||| || || | ||| |||||| || || ||
Sbjct: 122 gatggcctaactgaacctctatgggatgcatccacggtatcatatccatcta------at 175
Query: 901 gccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacatgact 960
||||||||||| || || ||||| || ||||| | ||| |||||||||||||||||||
Sbjct: 176 gccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacatgacg 235
Query: 961 gtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttccgagc 1020
| ||||||||||||||||||||| ||||| |||||| |||| | || ||| || || |||
Sbjct: 236 gcagctgaggtgaccaagtttgttgatgggcttcttggttcgagacatgacctcccaagc 295
Query: 1021 ttcaaaaaccatattagagatttcctggtgcagtcgaaggagttctcagctcaggataac 1080
||||||||||||||||| || ||||||||||| || |||||||||||||| |||||||||
Sbjct: 296 ttcaaaaaccatattagggacttcctggtgcaatcaaaggagttctcagcccaggataac 355
Query: 1081 aaggatctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaatgctt 1140
|||||||| || |||||||||||||| | |||||||||| ||| | ||||| ||||||
Sbjct: 356 aaggatctgtatgcggaagaggctgcggtacaaagagaaaaggaaaggcaacggatgctt 415
Query: 1141 gccattccggggctgattgcccctagcgaattgcaagacgagatggtagattcgtagtg 1199
||||| || |||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 416 gccatcccagggctgattgccccaagcgaattgcaagatgagatggtagactcatagtg 474
>gb|CA487127.1|CA487127 WHE4340_H06_P12ZS Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4340_H06_P12, mRNA sequence
Length = 319
Score = 361 bits (182), Expect = 1e-097
Identities = 288/321 (89%), Gaps = 18/321 (5%)
Strand = Plus / Plus
Query: 1095 ggaagaggctgctgcccaaagagaaagggagcgccaacgaatgcttgccattccggggct 1154
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1 ggaagaggctgctgcccaaagagatagggagcgccaacgaatgcttgccattccagggct 60
Query: 1155 gattgcccctagcgaattgcaagacgagatggtagattcgtagtgttccttgttttgatt 1214
|||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||
Sbjct: 61 cattgcccctagcgaattgcaagacgagatggtagattcatagtgtttcttg--tcgatt 118
Query: 1215 ctgctttctctaatgtagcttcctgtttgttggtctggcctcg----------ggagccc 1264
| |||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 119 cagctttcgctaatgtagcttcctgtttgttggtctggcctcggaatgcctctggagccc 178
Query: 1265 tcgtctttcaagtg--cgagttttcttccagggtggtga---aaggtggctgctgtaatt 1319
||| ||| |||||| ||||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 179 tcgacttccaagtgcccgagttttcttacagggtggtgaaagaaggtgcctgctgtaatt 238
Query: 1320 ttatttttggttacctccacatgatgctgattccaagatttgtggttgtagac-tgggaa 1378
|||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||
Sbjct: 239 ttatttttggttacctccacatgacgctgattccaagatttgtggtagtagacttgggaa 298
Query: 1379 tggactagtcagttttgccgc 1399
||||||||||||||||||||
Sbjct: 299 cggactagtcagttttgccgc 319
>gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full insert mRNA
sequence
Length = 890
Score = 268 bits (135), Expect = 1e-069
Identities = 261/303 (86%)
Strand = Plus / Plus
Query: 897 taatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacat 956
||||||||||||||| || || ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 103 taatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacat 162
Query: 957 gactgtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttcc 1016
||| | ||||||||||||||||||||| ||||| || ||| |||| | || ||| || ||
Sbjct: 163 gacggcagctgaggtgaccaagtttgttgatgggctccttggttcgagacatgacctccc 222
Query: 1017 gagcttcaaaaaccatattagagatttcctggtgcagtcgaaggagttctcagctcagga 1076
|||||||||||||||||||| || ||||||||||| || |||||||||||||| |||||
Sbjct: 223 aagcttcaaaaaccatattagggacttcctggtgcaatcaaaggagttctcagcccagga 282
Query: 1077 taacaaggatctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaat 1136
|||||||||||| || |||||||||||||| | |||||||||| ||| | ||||| ||
Sbjct: 283 taacaaggatctgtatgcggaagaggctgcggtacaaagagaaaaggaaaggcaacggat 342
Query: 1137 gcttgccattccggggctgattgcccctagcgaattgcaagacgagatggtagattcgta 1196
||||||||| || |||||||||||||| |||||||||||||| ||||||||||| || ||
Sbjct: 343 gcttgccatcccagggctgattgccccaagcgaattgcaagatgagatggtagactcata 402
Query: 1197 gtg 1199
|||
Sbjct: 403 gtg 405
Score = 93.7 bits (47), Expect = 4e-017
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 796 ttcaagcttcatgtttcggtgctacaacacttgttttgtgcggttgatggtctaacggag 855
||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 8 ttcaaacttcatgttttggtgctacaacacttgttttgtgtggttgatggcctaactgaa 67
Query: 856 cctctatggga 866
|||||||||||
Sbjct: 68 cctctatggga 78
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1280 gagttttcttccagggtggtg 1300
|||||||||||||||||||||
Sbjct: 484 gagttttcttccagggtggtg 504
>gb|CN010131.1|CN010131 WHE3867_A10_A19ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_A10_A19,
mRNA sequence
Length = 451
Score = 260 bits (131), Expect = 3e-067
Identities = 260/303 (85%)
Strand = Plus / Plus
Query: 897 taatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacat 956
||||||||||||||| || || ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 56 taatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacat 115
Query: 957 gactgtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttcc 1016
||| | ||||||||||||||||||||| ||||| |||||| |||| | || ||| || ||
Sbjct: 116 gacggcagctgaggtgaccaagtttgttgatgggcttcttggttcgagacatgacctccc 175
Query: 1017 gagcttcaaaaaccatattagagatttcctggtgcagtcgaaggagttctcagctcagga 1076
|||||||||||||||||||| | ||||||||||| || |||||||| ||||| |||||
Sbjct: 176 aagcttcaaaaaccatattaggcacttcctggtgcaatcaaaggagttttcagcccagga 235
Query: 1077 taacaaggatctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaat 1136
|||||||||||| || |||||||||||||| | |||||||||| ||| | ||||| ||
Sbjct: 236 taacaaggatctgtatgcggaagaggctgcggtacaaagagaaaaggaaaggcaacggat 295
Query: 1137 gcttgccattccggggctgattgcccctagcgaattgcaagacgagatggtagattcgta 1196
||||||||| || |||||||||||||| |||||||||||||| ||||||||||| || ||
Sbjct: 296 gcttgccatcccagggctgattgccccaagcgaattgcaagatgagatggtagactcata 355
Query: 1197 gtg 1199
|||
Sbjct: 356 gtg 358
>gb|CD900693.1|CD900693 G356.101H03R011023 G356 Triticum aestivum cDNA clone G356101H03, mRNA
sequence
Length = 732
Score = 244 bits (123), Expect = 2e-062
Identities = 225/259 (86%)
Strand = Plus / Minus
Query: 941 catcatttcctaacatgactgtagctgaggtgaccaagtttgtggatggccttcttagtt 1000
||||||||||||||||||| | ||||||||||||||||||||| ||||| || ||| |||
Sbjct: 717 catcatttcctaacatgacggcagctgaggtgaccaagtttgttgatgggctccttggtt 658
Query: 1001 caaaacttgatcttccgagcttcaaaaaccatattagagatttcctggtgcagtcgaagg 1060
| | || ||| || || ||||||||||||||||| || || ||||||||||| || ||||
Sbjct: 657 cgagacatgacctcccaagcttcaaaaaccatatcagggacttcctggtgcaatcaaagg 598
Query: 1061 agttctcagctcaggataacaaggatctatacgcggaagaggctgctgcccaaagagaaa 1120
|||||||||| ||||||||||||||||| || |||||||||||||| | ||||||||||
Sbjct: 597 agttctcagcccaggataacaaggatctgtatgcggaagaggctgcggtacaaagagaaa 538
Query: 1121 gggagcgccaacgaatgcttgccattccggggctgattgcccctagcgaattgcaagacg 1180
||| | ||||| ||||||||||| || |||||||||||||| |||||||||||||| |
Sbjct: 537 aggaaaggcaacggatgcttgccatcccagggctgattgccccaagcgaattgcaagatg 478
Query: 1181 agatggtagattcgtagtg 1199
|||||||||| || |||||
Sbjct: 477 agatggtagactcatagtg 459
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1280 gagttttcttccagggtggtg 1300
|||||||||||||||||||||
Sbjct: 380 gagttttcttccagggtggtg 360
>gb|CD900692.1|CD900692 G356.101H03F010906 G356 Triticum aestivum cDNA clone G356101H03, mRNA
sequence
Length = 610
Score = 232 bits (117), Expect = 6e-059
Identities = 222/257 (86%)
Strand = Plus / Plus
Query: 943 tcatttcctaacatgactgtagctgaggtgaccaagtttgtggatggccttcttagttca 1002
||||||||||||||||| | ||||||||||||||||||||| ||||| || || ||||
Sbjct: 44 tcatttcctaacatgacggcagctgaggtgaccaagtttgttgatgggctcctgggttcg 103
Query: 1003 aaacttgatcttccgagcttcaaaaaccatattagagatttcctggtgcagtcgaaggag 1062
| || ||| || || ||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 104 agacatgacctcccaagcttcaaaaaccatatcagggacttcctggtgcaatcaaaggag 163
Query: 1063 ttctcagctcaggataacaaggatctatacgcggaagaggctgctgcccaaagagaaagg 1122
|||||||| ||||||||||||||||| || |||||||||||||| | |||||||||| |
Sbjct: 164 ttctcagcccaggataacaaggatctgtatgcggaagaggctgcggtacaaagagaaaag 223
Query: 1123 gagcgccaacgaatgcttgccattccggggctgattgcccctagcgaattgcaagacgag 1182
|| | ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||
Sbjct: 224 gaaaggcaacggatgcttgccatcccagggctgattgccccaagcgaattgcaagatgag 283
Query: 1183 atggtagattcgtagtg 1199
|||||||| || |||||
Sbjct: 284 atggtagactcatagtg 300
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1280 gagttttcttccagggtggtg 1300
|||||||||||||||||||||
Sbjct: 379 gagttttcttccagggtggtg 399
>gb|CA502596.1|CA502596 WHE4302_D05_G10ZS Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4302_D05_G10, mRNA sequence
Length = 653
Score = 218 bits (110), Expect = 9e-055
Identities = 201/226 (88%), Gaps = 9/226 (3%)
Strand = Plus / Minus
Query: 1252 gcctcgggagccctcgtctttcaagtgc--gagttttcttccagggtggtgaaag---gt 1306
||||| |||||||||| ||| ||||||| |||||||||| |||||||||||||| ||
Sbjct: 433 gcctctggagccctcgacttccaagtgcccgagttttcttacagggtggtgaaagaaggt 374
Query: 1307 ggctgctgtaattttatttttggttacctccacatgatgctgattccaagatttgtggtt 1366
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 373 gcctgctgtaattttatttttggttacctccacatgacgctgattccaagatttgtggta 314
Query: 1367 gtagac-tgggaatggactagtcagttttgccgcaggggaggttcctggaaccgctgttg 1425
|||||| |||||| ||||||||||||||||||||| |||||| |||| || | || ||
Sbjct: 313 gtagacttgggaacggactagtcagttttgccgca--ggaggtgtctgggactgttgctg 256
Query: 1426 ggtcttcagcagctgtgcttgcctggatgtgttaacagcggctctt 1471
|||| |||||||||||||||| |||||||||||| |||||||||||
Sbjct: 255 ggtc-tcagcagctgtgcttgactggatgtgttagcagcggctctt 211
Score = 107 bits (54), Expect = 2e-021
Identities = 77/84 (91%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 1471 taacattggtgcgtgtgctttgcccatggtatatcatcgtggtacagcattgtatgcttc 1530
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 192 taacattggtgcgtgtgctttgcccatgatatatc---gtggtacagcattgtatgcttc 136
Query: 1531 ttcagttgaagctcatagatggat 1554
|| |||||||| | ||||||||||
Sbjct: 135 tttagttgaagtttatagatggat 112
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1559 gctgataggaaccttgatatatctgtactgtactattct 1597
|||||||||||||||| |||||||||| | |||||||||
Sbjct: 81 gctgataggaaccttgttatatctgtagtttactattct 43
>gb|CD928988.1|CD928988 GR45.106K06R010611 GR45 Triticum aestivum cDNA clone GR45106K06, mRNA
sequence
Length = 676
Score = 218 bits (110), Expect = 9e-055
Identities = 203/234 (86%)
Strand = Plus / Minus
Query: 966 tgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttccgagcttcaa 1025
|||||||||||||||||| ||||| |||||| |||| | || ||| || || ||||||||
Sbjct: 674 tgaggtgaccaagtttgttgatgggcttcttggttcgagacatgacctcccaagcttcaa 615
Query: 1026 aaaccatattagagatttcctggtgcagtcgaaggagttctcagctcaggataacaagga 1085
|||||||||||| || ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 614 aaaccatattagggacttcctggtgcaatctaaggagttctcagcccaggataacaagga 555
Query: 1086 tctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaatgcttgccat 1145
||| || |||||||||||||| | | |||||||| ||| | ||||| |||||||||||
Sbjct: 554 tctgtatgcggaagaggctgcggtaccaagagaaaaggaaaggcaacggatgcttgccat 495
Query: 1146 tccggggctgattgcccctagcgaattgcaagacgagatggtagattcgtagtg 1199
|| |||||||||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 494 cccagggctgattgccccaagcgaattgcaagatgagatggtagactcatagtg 441
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1280 gagttttcttccagggtggtg 1300
|||||||||||||||||||||
Sbjct: 358 gagttttcttccagggtggtg 338
>gb|DR733347.1|DR733347 FGAS079106 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 214 bits (108), Expect = 1e-053
Identities = 209/240 (87%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 10 attgatatcctgaagaaccaagatgttatccgatcagttctcaacattctacagacaaac 69
|||||||||||||||||||||||||||||| |||| ||||| ||||| | |||||||||
Sbjct: 579 attgatatcctgaagaaccaagatgttatcagatctgttcttaacatcttgcagacaaac 638
Query: 70 acaagtgttgcgagctcacttgggccacacttcttcccacagatttcactaattttcttg 129
||||||||||||| || ||||| |||||||| |||||||| |||||||| || ||| |
Sbjct: 639 acaagtgttgcgacttcgcttggaccacactttttcccacaaatttcactgatcttcctc 698
Query: 130 gacatgctaacagtctacagaatgtacagcgagcttgtatcaagcacgattgctgaagga 189
|||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 699 gacatgctgacagtttacagaatgtacagcgagctagtatcaagcactattgctgagggg 758
Query: 190 ggaccctttg-cctcaaggacgtcatttgtaaaactcttgagatctgtcaagagggaaac 248
|| || | || |||||| | |||||||||||| |||||| |||||| |||||||||||||
Sbjct: 759 gggccttatgccctcaa-gtcgtcatttgtaagactctttagatctatcaagagggaaac 817
>gb|BQ842661.1|BQ842661 WHE2996_C01_E02ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2996_C01_E02, mRNA sequence
Length = 381
Score = 196 bits (99), Expect = 3e-048
Identities = 200/236 (84%)
Strand = Plus / Plus
Query: 476 ttgagatgattactaagaactttgaagattatcctgagcaccgcctcaaannnnnnnctt 535
|||||||||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 106 ttgagatgattactaaaaacttcgaagattatcctgagcaccgcctcaagtttttctctc 165
Query: 536 tgcttcgtgcaattggcacccattgcttccaagcattaatccagctttcaagtcagcaat 595
| |||||||| || ||||||||||||||| |||| ||||| |||||||| || |||||||
Sbjct: 166 tacttcgtgctatcggcacccattgcttcaaagctttaattcagctttccagccagcaat 225
Query: 596 tgaagcttgtgatcgattcaattaattgggcgttcagacatacagagagaaatattgcag 655
||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||| |
Sbjct: 226 tgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaacattgccg 285
Query: 656 agactggccttagcctgttgttggagatcttgaaaaaattccaggcttcaggattc 711
||||||| ||||| || |||||||| || |||| || || |||||||||| ||||
Sbjct: 286 agactggtcttagtcttttgttggaaattctgaagaattttcaggcttcagaattc 341
>gb|CK153666.1|CK153666 FGAS032314 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 896
Score = 192 bits (97), Expect = 5e-047
Identities = 198/234 (84%)
Strand = Plus / Plus
Query: 478 gagatgattactaagaactttgaagattatcctgagcaccgcctcaaannnnnnnctttg 537
|||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 164 gagatgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctcttta 223
Query: 538 cttcgtgcaattggcacccattgcttccaagcattaatccagctttcaagtcagcaattg 597
|||||||| || ||||||||||||||| ||| ||||| ||| |||| || |||||||||
Sbjct: 224 cttcgtgctatcggcacccattgcttcaaagttttaattcagttttccagccagcaattg 283
Query: 598 aagcttgtgatcgattcaattaattgggcgttcagacatacagagagaaatattgcagag 657
||||||||||| ||||| ||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 284 aagcttgtgattgattcgattaactgggcatttagacatacagagagaaacattgccgag 343
Query: 658 actggccttagcctgttgttggagatcttgaaaaaattccaggcttcaggattc 711
||||| ||||| || |||||||| || |||| || || |||||||||| ||||
Sbjct: 344 actggtcttagtcttttgttggaaattctgaagaattttcaggcttcagaattc 397
>gb|CD870461.1|CD870461 AZO2.114I02F010115 AZO2 Triticum aestivum cDNA clone AZO2114I02, mRNA
sequence
Length = 269
Score = 186 bits (94), Expect = 3e-045
Identities = 181/210 (86%)
Strand = Plus / Plus
Query: 897 taatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacat 956
||||||||||||||| || || ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 55 taatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacat 114
Query: 957 gactgtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttcc 1016
||| | ||||||||||||||||||||| ||||| || ||| |||| | || ||| || ||
Sbjct: 115 gacggcagctgaggtgaccaagtttgttgatgggctccttggttcgagacatgacctccc 174
Query: 1017 gagcttcaaaaaccatattagagatttcctggtgcagtcgaaggagttctcagctcagga 1076
||||||||||||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct: 175 aagcttcaaaaaccatatcagggacttcctggtgcaatcaaaggagttctcagcccagga 234
Query: 1077 taacaaggatctatacgcggaagaggctgc 1106
|||||||||||| || ||||||||||||||
Sbjct: 235 taacaaggatctgtatgcggaagaggctgc 264
>gb|CA641677.1|CA641677 wre1n.pk0047.b2 wre1n Triticum aestivum cDNA clone wre1n.pk0047.b2 5'
end, mRNA sequence
Length = 574
Score = 163 bits (82), Expect = 5e-038
Identities = 211/250 (84%), Gaps = 3/250 (1%)
Strand = Plus / Plus
Query: 897 taatgccatgtttgttcgagattacaccataaaactcttaggaacatcatttcctaacat 956
||||||||||||||| || || ||||| || ||||| | ||| ||||||||||||||||
Sbjct: 96 taatgccatgtttgtacgggactacacaatcaaacttcttggagcatcatttcctaacat 155
Query: 957 gactgtagctgaggtgaccaagtttgtggatggccttcttagttcaaaacttgatcttcc 1016
||| | ||||||||||||||||||||| ||||| || ||| |||| | || ||| || ||
Sbjct: 156 gacggcagctgaggtgaccaagtttgttgatgggctccttggttcgagacatgacctccc 215
Query: 1017 gagcttcaaaaaccatattagagatttcct-ggtgcagtcgaaggagttctcagctcagg 1075
|||||||||||||||||||| || ||||| |||||| || ||||| |||||||| ||||
Sbjct: 216 aagcttcaaaaaccatattagggacttcctgggtgcaatcaaagga-ttctcagcccagg 274
Query: 1076 ataacaaggatctatacgcggaagaggctgctgcccaaagagaaagggagcgccaacgaa 1135
||||||| ||||| || |||||||||||||| | |||||||||| ||| | ||||| |
Sbjct: 275 ataacaa-gatctgtatgcggaagaggctgcggtacaaagagaaaaggaaaggcaacgga 333
Query: 1136 tgcttgccat 1145
||||||||||
Sbjct: 334 tgcttgccat 343
Score = 93.7 bits (47), Expect = 4e-017
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 796 ttcaagcttcatgtttcggtgctacaacacttgttttgtgcggttgatggtctaacggag 855
||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 1 ttcaaacttcatgttttggtgctacaacacttgttttgtgtggttgatggcctaactgaa 60
Query: 856 cctctatggga 866
|||||||||||
Sbjct: 61 cctctatggga 71
>gb|BE400978.1|BE400978 AWB009.D11F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB009.D11, mRNA sequence
Length = 442
Score = 151 bits (76), Expect = 2e-034
Identities = 184/220 (83%)
Strand = Plus / Plus
Query: 588 tcagcaattgaagcttgtgatcgattcaattaattgggcgttcagacatacagagagaaa 647
||||||||||||||||||||| ||||| || || ||||| || |||||||||||||||||
Sbjct: 223 tcagcaattgaagcttgtgattgattcgatcaactgggcatttagacatacagagagaaa 282
Query: 648 tattgcagagactggccttagcctgttgttggagatcttgaaaaaattccaggcttcagg 707
||||| |||||||| ||||| || || ||||| || |||| || || ||||||||||
Sbjct: 283 cattgccgagactggtcttagtcttttattggaaattctgaagaattttcaggcttcaga 342
Query: 708 attccaaaaccaattctacaaaacctactttttgacaattgagcaagagatttttgcagt 767
|||| || || ||||||||||| || |||||||| || ||||| ||||||||||||||
Sbjct: 343 attcacgaatcagttctacaaaacatattttttgactatagagcaggagatttttgcagt 402
Query: 768 cctcacagacacattccataaacctggtttcaagcttcat 807
|||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 403 tctcacagattcatttcataagcctggcttcaaacttcat 442
Score = 105 bits (53), Expect = 9e-021
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 479 agatgattactaagaactttgaagattatcctgagcaccgcctcaaannnnnnnctttgc 538
||||||||||||| |||||||||||||||||||||||||||||||| |||| |
Sbjct: 4 agatgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttac 63
Query: 539 ttcgtgcaattggcacccattgcttccaagcattaatccagctttc 584
||||||| || ||||||||||||||| |||| ||||| ||||||||
Sbjct: 64 ttcgtgctatcggcacccattgcttcaaagctttaattcagctttc 109
>gb|CA717265.1|CA717265 wdk4c.pk005.d16 wdk4c Triticum aestivum cDNA clone wdk4c.pk005.d16
5' end, mRNA sequence
Length = 549
Score = 40.1 bits (20), Expect = 0.46
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 408 taacaagtacaaaggggaaatgct 431
||||||| ||||||||||||||||
Sbjct: 167 taacaagaacaaaggggaaatgct 144
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 280,163
Number of Sequences: 636343
Number of extensions: 280163
Number of successful extensions: 72958
Number of sequences better than 0.5: 19
Number of HSP's better than 0.5 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72886
Number of HSP's gapped (non-prelim): 56
length of query: 1599
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1579
effective length of database: 354,513,379
effective search space: 559776625441
effective search space used: 559776625441
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)