BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580194.2.1
(542 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE497904.1|BE497904 WHE0958_H06_P12ZS Wheat pre-anthesis... 337 5e-091
gb|BQ241175.1|BQ241175 TaE05008D01R TaE05 Triticum aestivum... 337 5e-091
gb|AL828083.1|AL828083 AL828083 p:739 Triticum aestivum cDN... 337 5e-091
gb|BJ233222.1|BJ233222 BJ233222 Y. Ogihara unpublished cDNA... 329 1e-088
gb|BJ235424.1|BJ235424 BJ235424 Y. Ogihara unpublished cDNA... 329 1e-088
gb|AL828077.1|AL828077 AL828077 p:739 Triticum aestivum cDN... 329 1e-088
gb|CV771207.1|CV771207 FGAS065600 Triticum aestivum FGAS: L... 329 1e-088
gb|CK163719.1|CK163719 FGAS016350 Triticum aestivum FGAS: L... 327 5e-088
gb|AL828084.1|AL828084 AL828084 p:739 Triticum aestivum cDN... 319 1e-085
gb|BJ258721.1|BJ258721 BJ258721 Y. Ogihara unpublished cDNA... 299 1e-079
gb|BE500343.1|BE500343 WHE0982_H01_P02ZS Wheat pre-anthesis... 289 1e-076
gb|AL809447.1|AL809447 AL809447 a:11 Triticum aestivum cDNA... 278 4e-073
gb|AL809442.1|AL809442 AL809442 a:11 Triticum aestivum cDNA... 276 1e-072
gb|AL828627.1|AL828627 AL828627 p:739 Triticum aestivum cDN... 266 1e-069
gb|CB307401.1|CB307401 HFIG386 Hessian fly infested cDNA li... 252 2e-065
gb|BE604186.1|BE604186 WHE1413-1416_E17_E17ZS Wheat drought... 246 1e-063
gb|BI479875.1|BI479875 WHE3454_B03_D06ZS Wheat pre-anthesis... 224 5e-057
gb|CA713815.1|CA713815 wdk3c.pk020.g16 wdk3c Triticum aesti... 204 5e-051
gb|BJ280842.1|BJ280842 BJ280842 Y. Ogihara unpublished cDNA... 202 2e-050
gb|BQ246024.1|BQ246024 TaE15017B03R TaE15 Triticum aestivum... 202 2e-050
gb|CK196497.1|CK196497 FGAS004956 Triticum aestivum FGAS: L... 202 2e-050
gb|DR740420.1|DR740420 FGAS000367 Triticum aestivum FGAS: L... 202 2e-050
gb|CD936221.1|CD936221 OV.104B21F010202 OV Triticum aestivu... 194 4e-048
gb|CB307259.1|CB307259 HFIG244 Hessian fly infested cDNA li... 194 4e-048
gb|CA727405.1|CA727405 wdi1c.pk001.i1 wdi1c Triticum aestiv... 192 2e-047
gb|CA659010.1|CA659010 wlm1.pk0002.c8 wlm1 Triticum aestivu... 163 2e-038
gb|AL822979.1|AL822979 AL822979 p:335 Triticum aestivum cDN... 143 1e-032
gb|BE427387.1|BE427387 PSR6054 ITEC PSR Wheat Pericarp/Test... 127 8e-028
gb|BJ232157.1|BJ232157 BJ232157 Y. Ogihara unpublished cDNA... 117 8e-025
gb|BQ240812.1|BQ240812 TaE05012F03R TaE05 Triticum aestivum... 92 5e-017
gb|BJ256519.1|BJ256519 BJ256519 Y. Ogihara unpublished cDNA... 86 3e-015
gb|BJ262029.1|BJ262029 BJ262029 Y. Ogihara unpublished cDNA... 68 7e-010
gb|BG904475.1|BG904475 TaLr1132E10R TaLr1 Triticum aestivum... 64 1e-008
gb|AL822589.1|AL822589 AL822589 p:335 Triticum aestivum cDN... 64 1e-008
gb|CA635388.1|CA635388 wle1n.pk0093.h11 wle1n Triticum aest... 64 1e-008
gb|BJ280499.1|BJ280499 BJ280499 Y. Ogihara unpublished cDNA... 52 4e-005
gb|CA708608.1|CA708608 wdk2c.pk009.d10 wdk2c Triticum aesti... 52 4e-005
>gb|BE497904.1|BE497904 WHE0958_H06_P12ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0958_H06_P12, mRNA sequence
Length = 565
Score = 337 bits (170), Expect = 5e-091
Identities = 275/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 227 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 286
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 287 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 346
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 347 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgcaaagcgcaacttc 406
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 407 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 466
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 467 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 526
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 527 gccttcctcg 536
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 153 agaagatgaagcggaagacgcggaacaagatc 184
>gb|BQ241175.1|BQ241175 TaE05008D01R TaE05 Triticum aestivum cDNA clone TaE05008D01R, mRNA
sequence
Length = 585
Score = 337 bits (170), Expect = 5e-091
Identities = 275/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 85 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 144
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 145 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 204
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 205 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgcaaagcgcaacttc 264
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 265 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 324
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 325 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 384
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 385 gccttcctcg 394
Score = 61.9 bits (31), Expect = 4e-008
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 160 gaagatgaagcggaagacgcggaacaagatc 190
|||||||||||||||||||||||||||||||
Sbjct: 12 gaagatgaagcggaagacgcggaacaagatc 42
>gb|AL828083.1|AL828083 AL828083 p:739 Triticum aestivum cDNA clone H11_p739_plate_5_run_2,
mRNA sequence
Length = 611
Score = 337 bits (170), Expect = 5e-091
Identities = 275/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 214 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 273
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 274 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 333
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 334 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgcaaagcgcaacttc 393
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 394 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 453
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 454 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 513
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 514 gccttcctcg 523
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 140 agaagatgaagcggaagacgcggaacaagatc 171
>gb|BJ233222.1|BJ233222 BJ233222 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe3m12 5', mRNA sequence
Length = 603
Score = 329 bits (166), Expect = 1e-088
Identities = 274/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 200 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 259
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 260 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 319
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 379
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 380 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 439
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 440 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 499
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 500 gccttcctcg 509
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 126 agaagatgaagcggaagacgcggaacaagatc 157
>gb|BJ235424.1|BJ235424 BJ235424 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe16j04 5', mRNA sequence
Length = 593
Score = 329 bits (166), Expect = 1e-088
Identities = 274/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 213 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 272
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 273 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 332
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 333 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 392
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 393 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 452
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 453 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 512
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 513 gccttcctcg 522
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 139 agaagatgaagcggaagacgcggaacaagatc 170
>gb|AL828077.1|AL828077 AL828077 p:739 Triticum aestivum cDNA clone G12_p739_plate_5_run_2,
mRNA sequence
Length = 525
Score = 329 bits (166), Expect = 1e-088
Identities = 274/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 205 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 264
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 265 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 324
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 325 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgcaaagcgcaacttc 384
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 385 cccgtcgcctaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 444
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 445 ttcgagaaccagggcttctgcaccaccggcggcatcgacgtgcagatgatggagctctgc 504
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 505 gccttcctcg 514
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 131 agaagatgaagcggaagacgcggaacaagatc 162
>gb|CV771207.1|CV771207 FGAS065600 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 880
Score = 329 bits (166), Expect = 1e-088
Identities = 274/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 347 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 406
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 407 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 466
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 467 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 526
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 527 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 586
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 587 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 646
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 647 gccttcctcg 656
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 273 agaagatgaagcggaagacgcggaacaagatc 304
>gb|CK163719.1|CK163719 FGAS016350 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1064
Score = 327 bits (165), Expect = 5e-088
Identities = 273/310 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 278 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 337
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 338 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 397
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 398 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgncaagcgcaacttc 457
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||| || | |||
Sbjct: 458 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgncgnctcgctc 517
Query: 473 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 532
|||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 518 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 577
Query: 533 gccttcctcg 542
||||||||||
Sbjct: 578 gccttcctcg 587
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 204 agaagatgaagcggaagacgcggaacaagatc 235
>gb|AL828084.1|AL828084 AL828084 p:739 Triticum aestivum cDNA clone H12_p739_plate_5, mRNA
sequence
Length = 499
Score = 319 bits (161), Expect = 1e-085
Identities = 303/349 (86%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatcatcgt-atggacgctggccctggctgca 217
|||||||||||||||||||||||||||||||| | || | ||| |||| |||| ||
Sbjct: 151 agaagatgaagcggaagacgcggaacaagatcgtggtgacggatgctgctgctgggggcg 210
Query: 218 gtggcgattctggtgggcggcacgattgcgctggtgctcacggcggggacgtggaaggcc 277
| |||| | ||| | ||||||||| | |||||| | || |||||||||||||||||||
Sbjct: 211 gcggcggtgctgatcggcggcacgctggcgctgatcctgacggcggggacgtggaaggtg 270
Query: 278 aagataaagaagtcgcaggagaagatctgtaacaaggggtgggagtgctcggggagcaag 337
||| | ||| |||||||||||||| | || |||||||||||||||||||| || | ||||
Sbjct: 271 aagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccggcaccaag 330
Query: 338 tactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacctcttc 397
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacctcttc 390
Query: 398 gccaagcgcaacacccccgtcgcgcacgccgtcgggttctgggactaccaggccttcatc 457
|| ||||||||| ||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 391 gcaaagcgcaacttccccgtcgcccaggccgtcggcttctgggactaccaggccttcatc 450
Query: 458 accgccgcggccctcttcgagccccaggggttctgcaccaccggcggca 506
|||||||| | ||||||||| |||||| |||||||||||||||||||
Sbjct: 451 accgccgcctcgctcttcgagaaccagggcttctgcaccaccggcggca 499
>gb|BJ258721.1|BJ258721 BJ258721 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9e16 5', mRNA sequence
Length = 595
Score = 299 bits (151), Expect = 1e-079
Identities = 230/255 (90%), Gaps = 1/255 (0%)
Strand = Plus / Plus
Query: 288 agtcgcaggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgca 347
|||||||||||||| | || |||||||||||||||||||| || | ||||||||||||||
Sbjct: 10 agtcgcaggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgca 69
Query: 348 acgacaccatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgca 407
|| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 accagac-atcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgca 128
Query: 408 acacccccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcgg 467
|| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 129 acttccccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcct 188
Query: 468 ccctcttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagc 527
| ||||||||| |||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct: 189 cgctcttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagc 248
Query: 528 tctgcgccttcctcg 542
|||||||||||||||
Sbjct: 249 tctgcgccttcctcg 263
>gb|BE500343.1|BE500343 WHE0982_H01_P02ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0982_H01_P02, mRNA sequence
Length = 334
Score = 289 bits (146), Expect = 1e-076
Identities = 242/274 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 43 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 102
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 103 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 162
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 163 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 222
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 223 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 282
Query: 473 ttcgagccccaggggttctgcaccaccggcggca 506
|||||| |||||| |||||||||||||||||||
Sbjct: 283 ttcgagaaccagggcttctgcaccaccggcggca 316
>gb|AL809447.1|AL809447 AL809447 a:11 Triticum aestivum cDNA clone F10_a11_plate_1, mRNA
sequence
Length = 465
Score = 278 bits (140), Expect = 4e-073
Identities = 240/274 (87%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 180 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 239
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 240 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 299
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 300 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgctnagcgcaacttc 359
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 360 cccgtcgccnaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 419
Query: 473 ttcgagccccaggggttctgcaccaccggcggca 506
|||||| |||||| |||||||||||||||||||
Sbjct: 420 ttcgagaaccagggcttctgcaccaccggcggca 453
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 106 agaagatgaagcggaagacgcggaacaagatc 137
>gb|AL809442.1|AL809442 AL809442 a:11 Triticum aestivum cDNA clone E10_a11_plate_1, mRNA
sequence
Length = 458
Score = 276 bits (139), Expect = 1e-072
Identities = 237/270 (87%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 189 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 248
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 249 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 308
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 309 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgctnagcgcaacttc 368
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| || |||||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 369 cccgtcgcccaggccgtcggcttctgggactaccaggccttcatcaccgccgcctcgctc 428
Query: 473 ttcgagccccaggggttctgcaccaccggc 502
|||||| |||||| |||||||||||||||
Sbjct: 429 ttcgagaaccagggcttctgcaccaccggc 458
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 112 agaagatgaagcggaagacgcggaacaagatc 143
>gb|AL828627.1|AL828627 AL828627 p:739 Triticum aestivum cDNA clone G10_p739_plate_6, mRNA
sequence
Length = 503
Score = 266 bits (134), Expect = 1e-069
Identities = 239/274 (87%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 228 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 287
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 288 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 347
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 348 accatcgccgacttcttcaaggtgtaccagttcgagaacctcttcgcccagcgcaacttc 407
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 472
|||||||| | |||||||| |||||||||||||||||||||||||||| ||| | |||
Sbjct: 408 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccggcgcctcgctc 467
Query: 473 ttcgagccccaggggttctgcaccaccggcggca 506
|||||| |||||| |||||||||||||||||||
Sbjct: 468 ttcgagaaccagggcttctgcaccaccggcggca 501
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||| ||||||||||||
Sbjct: 154 agaagatgaagcggaagacccggaacaagatc 185
>gb|CB307401.1|CB307401 HFIG386 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 470
Score = 252 bits (127), Expect = 2e-065
Identities = 202/227 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| |||||
Sbjct: 244 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 303
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 304 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 363
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 364 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgcaaagcgcaacttc 423
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcac 459
|||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 424 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcac 470
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 170 agaagatgaagcggaagacgcggaacaagatc 201
>gb|BE604186.1|BE604186 WHE1413-1416_E17_E17ZS Wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE1413-1416_E17_E17, mRNA
sequence
Length = 433
Score = 246 bits (124), Expect = 1e-063
Identities = 202/228 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 206 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 265
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 266 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 325
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 326 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 385
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcacc 460
|||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 386 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcacc 433
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 132 agaagatgaagcggaagacgcggaacaagatc 163
>gb|BI479875.1|BI479875 WHE3454_B03_D06ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_B03_D06, mRNA sequence
Length = 526
Score = 224 bits (113), Expect = 5e-057
Identities = 201/229 (87%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 298 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 357
Query: 293 caggagaagatctgtaacaaggggtgg-gagtgctcggggagcaagtactgctgcaacga 351
||||||||| | || |||||||||||| |||||||| || | |||||||||||||||| |
Sbjct: 358 caggagaaggtgtgcaacaaggggtggngagtgctccggcaccaagtactgctgcaacca 417
Query: 352 caccatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacac 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaccatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaactt 477
Query: 412 ccccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcacc 460
||||||||| | | |||||| |||||||||||||||||||||||||||
Sbjct: 478 ccccgtcgccaagggcgtcggcttctgggactaccaggccttcatcacc 526
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 224 agaagatgaagcggaagacgcggaacaagatc 255
>gb|CA713815.1|CA713815 wdk3c.pk020.g16 wdk3c Triticum aestivum cDNA clone wdk3c.pk020.g16
5' end, mRNA sequence
Length = 432
Score = 204 bits (103), Expect = 5e-051
Identities = 206/237 (86%), Gaps = 4/237 (1%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 194 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 253
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 254 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 313
Query: 353 accatcaccgacttcttcaaggtgtacc-agttcgagaacctcttcgccaagcgcaacac 411
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 314 accatcaccgacttcttcaaggtgtaccaagttcgagaacctcttcgccaagcgcaactt 373
Query: 412 ccccgtcgcgca--cgccgtcgggttctgggactacc-aggccttcatcaccgccgc 465
||||||||| | | |||||| ||||||||||||| |||||||||||||||||||
Sbjct: 374 ccccgtcgccaaanggncgtcggcttctgggactaccaaggccttcatcaccgccgc 430
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 120 agaagatgaagcggaagacgcggaacaagatc 151
>gb|BJ280842.1|BJ280842 BJ280842 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19f11 5', mRNA sequence
Length = 563
Score = 202 bits (102), Expect = 2e-050
Identities = 201/234 (85%)
Strand = Plus / Plus
Query: 309 acaaggggtgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttct 368
||||||||||||||||| || |||| || |||||||||||| ||||||||||||| ||
Sbjct: 138 acaaggggtgggagtgcagcggcagcaggttctgctgcaacgagaccatcaccgactact 197
Query: 369 tcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgcacgccg 428
|||||| |||||||||||| | ||||||||||||||||||| | || |||| |||||||
Sbjct: 198 tcaaggcctaccagttcgaggagctcttcgccaagcgcaacaactccctcgcccacgccg 257
Query: 429 tcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagccccaggggt 488
||| |||||||||||| ||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 258 ccggcttctgggactacaaggccttcatcaccgccgcggccctctacgagcctcgtgggt 317
Query: 489 tctgcaccaccggcggcaagcagatgcagatgatggagctctgcgccttcctcg 542
|| ||||||||||||||| | ||||| |||| |||| || |||||||||||
Sbjct: 318 tcggcaccaccggcggcagggagatgagcatgaaggaggtcgccgccttcctcg 371
>gb|BQ246024.1|BQ246024 TaE15017B03R TaE15 Triticum aestivum cDNA clone TaE15017B03R, mRNA
sequence
Length = 605
Score = 202 bits (102), Expect = 2e-050
Identities = 201/234 (85%)
Strand = Plus / Plus
Query: 309 acaaggggtgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttct 368
||||||||||||||||| || |||| || |||||||||||| ||||||||||||| ||
Sbjct: 172 acaaggggtgggagtgcagcggcagcaggttctgctgcaacgagaccatcaccgactact 231
Query: 369 tcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgcacgccg 428
|||||| |||||||||||| | ||||||||||||||||||| | || |||| |||||||
Sbjct: 232 tcaaggcctaccagttcgaggagctcttcgccaagcgcaacaactccctcgcccacgccg 291
Query: 429 tcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagccccaggggt 488
||| |||||||||||| ||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 292 ccggcttctgggactacaaggccttcatcaccgccgcggccctctacgagcctcgtgggt 351
Query: 489 tctgcaccaccggcggcaagcagatgcagatgatggagctctgcgccttcctcg 542
|| ||||||||||||||| | ||||| |||| |||| || |||||||||||
Sbjct: 352 tcggcaccaccggcggcagggagatgagcatgaaggaggtcgccgccttcctcg 405
>gb|CK196497.1|CK196497 FGAS004956 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 793
Score = 202 bits (102), Expect = 2e-050
Identities = 221/257 (85%), Gaps = 4/257 (1%)
Strand = Plus / Plus
Query: 288 agtcgcaggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgca 347
|||||||||||||| | || |||||||||||||||||||| || | ||||||||||||||
Sbjct: 281 agtcgcaggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgca 340
Query: 348 acgacaccatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgca 407
|| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 341 accagaccatcaccgacttcttcaaggtgtaccagttcgagaacctctttcgcaagcgca 400
Query: 408 ac-acccccgtcgcgcacgccgtcgggttc-tgggactaccaggccttcatcaccgccgc 465
|| |||||||||| | |||||||| ||| ||||||||||||| ||||||| || ||
Sbjct: 401 acttcccccgtcgccnangccgtcggcttcttgggactaccagggcttcatcnacgncgn 460
Query: 466 ggccctcttcgagccccaggg-gttctgcaccaccggcggcaagcagatgcagatgatgg 524
| ||||||||| |||||| ||||||| ||||||||||| | |||||||||||||
Sbjct: 461 ctcgctcttcgagaaccagggctttctgca-caccggcggcatcgacatgcagatgatgg 519
Query: 525 agctctgcgccttcctc 541
||||||||| |||||||
Sbjct: 520 agctctgcggcttcctc 536
>gb|DR740420.1|DR740420 FGAS000367 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1148
Score = 202 bits (102), Expect = 2e-050
Identities = 201/234 (85%)
Strand = Plus / Plus
Query: 309 acaaggggtgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttct 368
||||||||||||||||| || |||| || |||||||||||| ||||||||||||| ||
Sbjct: 207 acaaggggtgggagtgcagcggcagcaggttctgctgcaacgagaccatcaccgactact 266
Query: 369 tcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgcacgccg 428
|||||| |||||||||||| | ||||||||||||||||||| | || |||| |||||||
Sbjct: 267 tcaaggcctaccagttcgaggagctcttcgccaagcgcaacaactccctcgcccacgccg 326
Query: 429 tcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagccccaggggt 488
||| |||||||||||| ||||||||||||||||||||||||||| |||||| | ||||
Sbjct: 327 ccggcttctgggactacaaggccttcatcaccgccgcggccctctacgagcctcgtgggt 386
Query: 489 tctgcaccaccggcggcaagcagatgcagatgatggagctctgcgccttcctcg 542
|| ||||||||||||||| | ||||| |||| |||| || |||||||||||
Sbjct: 387 tcggcaccaccggcggcagggagatgagcatgaaggaggtcgccgccttcctcg 440
>gb|CD936221.1|CD936221 OV.104B21F010202 OV Triticum aestivum cDNA clone OV104B21, mRNA
sequence
Length = 722
Score = 194 bits (98), Expect = 4e-048
Identities = 173/198 (87%)
Strand = Plus / Plus
Query: 309 acaaggggtgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttct 368
||||||||||||||||| || |||| || |||||||||||| ||||||||||||| ||
Sbjct: 203 acaaggggtgggagtgcagcggcagcaggttctgctgcaacgagaccatcaccgactact 262
Query: 369 tcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgcacgccg 428
|||||| |||||||| ||| | ||||||||||||||||||| | || |||| |||||||
Sbjct: 263 tcaaggcctaccagtttgaggagctcttcgccaagcgcaacaactccctcgcccacgccg 322
Query: 429 tcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagccccaggggt 488
||| ||||||||||||| |||||||||||||||||||||||||| |||||| | ||||
Sbjct: 323 ccggcttctgggactaccgggccttcatcaccgccgcggccctctacgagcctcgcgggt 382
Query: 489 tctgcaccaccggcggca 506
|| |||||||||||||||
Sbjct: 383 tcggcaccaccggcggca 400
>gb|CB307259.1|CB307259 HFIG244 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 661
Score = 194 bits (98), Expect = 4e-048
Identities = 173/198 (87%)
Strand = Plus / Plus
Query: 309 acaaggggtgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttct 368
||||||||||||||||| || |||| || |||||||||||| ||||||||||||| ||
Sbjct: 32 acaaggggtgggagtgcagcggcagcaggttctgctgcaacgagaccatcaccgactact 91
Query: 369 tcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgcacgccg 428
|||||| |||||||| ||| | ||||||||||||||||||| | || |||| |||||||
Sbjct: 92 tcaaggcctaccagtttgaggagctcttcgccaagcgcaacaactccctcgcccacgccg 151
Query: 429 tcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagccccaggggt 488
||| ||||||||||||| |||||||||||||||||||||||||| |||||| | ||||
Sbjct: 152 ccggcttctgggactaccgggccttcatcaccgccgcggccctctacgagcctcgcgggt 211
Query: 489 tctgcaccaccggcggca 506
|| |||||||||||||||
Sbjct: 212 tcggcaccaccggcggca 229
>gb|CA727405.1|CA727405 wdi1c.pk001.i1 wdi1c Triticum aestivum cDNA clone wdi1c.pk001.i1 5'
end, mRNA sequence
Length = 667
Score = 192 bits (97), Expect = 2e-047
Identities = 193/226 (85%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 190 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 249
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 250 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccan 309
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 310 accatcaccgacttcttcaaggtgtaccagttcgaaaacctcttcnccaagcgcaacttc 369
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatca 458
|||||||| | | |||| |||| |||||||| || | ||||||||
Sbjct: 370 cccgtcgccaagggcgtcnggttttgggactaacaaggcttcatca 415
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 116 agaagatgaagcggaagacgcggaacaagatc 147
>gb|CA659010.1|CA659010 wlm1.pk0002.c8 wlm1 Triticum aestivum cDNA clone wlm1.pk0002.c8 5'
end, mRNA sequence
Length = 557
Score = 163 bits (82), Expect = 2e-038
Identities = 200/233 (85%), Gaps = 6/233 (2%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 205 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 264
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 265 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 324
Query: 353 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacc 412
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 325 accatcaccgacttcttcaaggtgta-cagttcgagaa-ctcttcgccaagcgcaac-tt 381
Query: 413 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgc 465
|||||||| || | |||||| |||||||||||| || | |||||||||||||
Sbjct: 382 cccgtcgc-caaggcgtcggcttctgggactacaag--cctcatcaccgccgc 431
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 131 agaagatgaagcggaagacgcggaacaagatc 162
>gb|AL822979.1|AL822979 AL822979 p:335 Triticum aestivum cDNA clone C05_p335_plate_5, mRNA
sequence
Length = 385
Score = 143 bits (72), Expect = 1e-032
Identities = 123/140 (87%)
Strand = Plus / Plus
Query: 257 acggcggggacgtggaaggccaagataaagaagtcgcaggagaagatctgtaacaagggg 316
|||||||| || ||||||| ||| | ||| ||||||| |||||| | || |||||||||
Sbjct: 246 acggcgggcacctggaaggtgaagctcaaggagtcgcatgagaaggtgtgcaacaagggg 305
Query: 317 tgggagtgctcggggagcaagtactgctgcaacgacaccatcaccgacttcttcaaggtg 376
||||||||||| || | |||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 306 tgggagtgctccggcaccaagtactgctgcaaccagaccatcaccgacttcttcagggtg 365
Query: 377 taccagttcgagaacctctt 396
||||||||||||||||||||
Sbjct: 366 taccagttcgagaacctctt 385
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 147 agaagatgaagcggaagacgcggaacaagatc 178
>gb|BE427387.1|BE427387 PSR6054 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6054, mRNA sequence
Length = 650
Score = 127 bits (64), Expect = 8e-028
Identities = 148/178 (83%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 364 cttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacacccccgtcgcgca 423
|||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||| |
Sbjct: 224 cttcttcaaggtgtaccanntcgagaaccttttcgcaaagcgcaacttccccgtcgccaa 283
Query: 424 cgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctcttcgagcccca 483
|||||| | ||||||||||||||||||||||| |||||||| | |||||| || |||
Sbjct: 284 ggccgtcngcttctgggactaccaggccttcatnaccgccgcctcgctcttcnagaacca 343
Query: 484 ggg-gttctgcaccaccggcggcaagcagatgcagatgatggagctctgcgccttcct 540
|| || |||||||||||||| | | ||||| || ||||| ||||||||||||||
Sbjct: 344 nggctttttgcaccaccggcggnatcgacatgcanatnatgganctctgcgccttcct 401
>gb|BJ232157.1|BJ232157 BJ232157 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe11e16 5', mRNA sequence
Length = 445
Score = 117 bits (59), Expect = 8e-025
Identities = 119/139 (85%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 307 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 366
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | |||||||||||||||| |
Sbjct: 367 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaaccag 426
Query: 353 accatcaccgacttcttca 371
|||||||||||||||||||
Sbjct: 427 accatcaccgacttcttca 445
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 233 agaagatgaagcggaagacgcggaacaagatc 264
>gb|BQ240812.1|BQ240812 TaE05012F03R TaE05 Triticum aestivum cDNA clone TaE05012F03R, mRNA
sequence
Length = 370
Score = 91.7 bits (46), Expect = 5e-017
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 237 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 296
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 352
||||||||| | || |||||||||||||||||||| || | ||||||||||||||||
Sbjct: 297 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgcaacctg 356
Query: 353 accatcaccgactt 366
||||| ||||||||
Sbjct: 357 accatgaccgactt 370
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 163 agaagatgaagcggaagacgcggaacaagatc 194
>gb|BJ256519.1|BJ256519 BJ256519 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh16n12 5', mRNA sequence
Length = 637
Score = 85.7 bits (43), Expect = 3e-015
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 292
||||||||| | |||||| | || |||||||| || ||||||| ||| | ||| |||||
Sbjct: 234 ggcggcacgctggcgctgatcctgacggcgggcacctggaaggtgaagctcaaggagtcg 293
Query: 293 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgca 347
||||||||| | || |||||||||||||||||||| || | ||||||||||||||
Sbjct: 294 caggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgca 348
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 160 agaagatgaagcggaagacgcggaacaagatc 191
>gb|BJ262029.1|BJ262029 BJ262029 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh16n12 3', mRNA sequence
Length = 669
Score = 67.9 bits (34), Expect = 7e-010
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 290 tcgcaggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgca 347
|||||||||||| | || |||||||||||||||||||| || | ||||||||||||||
Sbjct: 669 tcgcaggagaaggtgtgcaacaaggggtgggagtgctccggcaccaagtactgctgca 612
>gb|BG904475.1|BG904475 TaLr1132E10R TaLr1 Triticum aestivum cDNA clone TaLr1132E10 5',
mRNA sequence
Length = 311
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 181 agaagatgaagcggaagacgcggaacaagatc 212
Score = 46.1 bits (23), Expect = 0.002
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 233 ggcggcacgattgcgctggtgctcacggcggggacgtggaagg 275
||||||||| | |||||| | || |||||||||||||||||||
Sbjct: 255 ggcggcacgctggcgctgatcctgacggcggggacgtggaagg 297
>gb|AL822589.1|AL822589 AL822589 p:335 Triticum aestivum cDNA clone E01_p335_plate_10, mRNA
sequence
Length = 288
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 250 agaagatgaagcggaagacgcggaacaagatc 281
>gb|CA635388.1|CA635388 wle1n.pk0093.h11 wle1n Triticum aestivum cDNA clone
wle1n.pk0093.h11 5' end, mRNA sequence
Length = 523
Score = 63.9 bits (32), Expect = 1e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 159 agaagatgaagcggaagacgcggaacaagatc 190
||||||||||||||||||||||||||||||||
Sbjct: 231 agaagatgaagcggaagacgcggaacaagatc 262
Score = 40.1 bits (20), Expect = 0.15
Identities = 37/42 (88%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 308 aacaaggggtgggagtgctcggggagcaagtactgctgcaac 349
||||| |||||||| ||||| || | ||||||||||||||||
Sbjct: 376 aacaangggtgggaatgctccggna-caagtactgctgcaac 416
>gb|BJ280499.1|BJ280499 BJ280499 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8i20 5', mRNA sequence
Length = 140
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 517 gatgatggagctctgcgccttcctcg 542
||||||||||||||||||||||||||
Sbjct: 1 gatgatggagctctgcgccttcctcg 26
>gb|CA708608.1|CA708608 wdk2c.pk009.d10 wdk2c Triticum aestivum cDNA clone wdk2c.pk009.d10
5' end, mRNA sequence
Length = 517
Score = 52.0 bits (26), Expect = 4e-005
Identities = 63/76 (82%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 334 caagtactgctgcaacgacaccatcacc-gacttcttcaaggtgtaccagttcgagaacc 392
||| ||||||||||| | ||||||||| ||||||||||| | | | || |||||||| |
Sbjct: 308 caantactgctgcaancanaccatcaccngacttcttcaatgngnancaattcgagaaac 367
Query: 393 tcttcgccaagcgcaa 408
||||| |||| |||||
Sbjct: 368 tcttctccaaacgcaa 383
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 165,166
Number of Sequences: 636343
Number of extensions: 165166
Number of successful extensions: 45230
Number of sequences better than 0.5: 37
Number of HSP's better than 0.5 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 45148
Number of HSP's gapped (non-prelim): 67
length of query: 542
length of database: 367,240,239
effective HSP length: 19
effective length of query: 523
effective length of database: 355,149,722
effective search space: 185743304606
effective search space used: 185743304606
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)