BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2622915.2.2
(562 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum... 172 2e-041
gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing g... 172 2e-041
gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA... 172 2e-041
gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA... 172 2e-041
gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aesti... 172 2e-041
gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stre... 172 2e-041
gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aes... 172 2e-041
gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aes... 172 2e-041
gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivu... 172 2e-041
gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: L... 172 2e-041
gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. du... 172 2e-041
gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aes... 168 3e-040
gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: L... 168 3e-040
gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA... 167 1e-039
gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP sp... 165 4e-039
gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcu... 165 4e-039
gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA... 165 4e-039
gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA... 165 4e-039
gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA... 165 4e-039
gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA... 165 4e-039
gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aesti... 165 4e-039
gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aes... 165 4e-039
gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: L... 165 4e-039
gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aest... 161 6e-038
gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum... 159 2e-037
gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA... 159 2e-037
gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: L... 155 4e-036
gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum... 151 6e-035
gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: T... 145 4e-033
gb|BJ253797.1|BJ253797 BJ253797 Y. Ogihara unpublished cDNA... 137 9e-031
gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: L... 123 1e-026
gb|CA646903.1|CA646903 wre1n.pk0118.b6 wre1n Triticum aesti... 113 1e-023
gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized c... 105 3e-021
gb|BQ807205.1|BQ807205 WHE3588_A10_A20ZS Wheat developing g... 86 3e-015
gb|BJ254078.1|BJ254078 BJ254078 Y. Ogihara unpublished cDNA... 84 1e-014
gb|BE445679.1|BE445679 WHE1452_F02_K04ZS Wheat etiolated se... 60 2e-007
gb|CK193804.1|CK193804 FGAS002221 Triticum aestivum FGAS: L... 54 1e-005
gb|CF134081.1|CF134081 WHE4367_E04_I07ZT Wheat meiotic flor... 46 0.003
gb|CA618261.1|CA618261 wl1n.pk0031.e9 wl1n Triticum aestivu... 42 0.040
>gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum cDNA clone TaE05038G07R, mRNA
sequence
Length = 566
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 406 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 347
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 346 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 287
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 286 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 227
Query: 451 accgtc 456
||||||
Sbjct: 226 accgtc 221
>gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3576_F08_K16, mRNA sequence
Length = 593
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 270 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 211
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 210 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 151
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 150 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 91
Query: 451 accgtc 456
||||||
Sbjct: 90 accgtc 85
>gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh19c06 3', mRNA sequence
Length = 742
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 330 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 389
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 390 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 449
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 450 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 509
Query: 451 accgtc 456
||||||
Sbjct: 510 accgtc 515
>gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11k21 3', mRNA sequence
Length = 676
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 244 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 303
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 304 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 363
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 364 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 423
Query: 451 accgtc 456
||||||
Sbjct: 424 accgtc 429
>gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0054.a2
5' end, mRNA sequence
Length = 623
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 285 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 226
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 225 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 166
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 165 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 106
Query: 451 accgtc 456
||||||
Sbjct: 105 accgtc 100
>gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0765_C06_F11, mRNA
sequence
Length = 512
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 323 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 382
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 383 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 442
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 443 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 502
Query: 451 accgtc 456
||||||
Sbjct: 503 accgtc 508
>gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aestivum cDNA clone G118125J15,
mRNA sequence
Length = 665
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 349 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 408
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 409 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 468
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 469 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 528
Query: 451 accgtc 456
||||||
Sbjct: 529 accgtc 534
>gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aestivum cDNA clone GR45102D12,
mRNA sequence
Length = 578
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 339 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 398
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 399 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 458
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 459 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 518
Query: 451 accgtc 456
||||||
Sbjct: 519 accgtc 524
>gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivum cDNA clone OV102F17, mRNA
sequence
Length = 653
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 292 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 351
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 352 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 411
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 412 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 471
Query: 451 accgtc 456
||||||
Sbjct: 472 accgtc 477
>gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 748
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 432 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 491
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 492 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 551
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 552 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 611
Query: 451 accgtc 456
||||||
Sbjct: 612 accgtc 617
>gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 07491R, mRNA
sequence
Length = 660
Score = 172 bits (87), Expect = 2e-041
Identities = 161/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 411 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 352
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 351 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 292
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 291 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 232
Query: 451 accgtc 456
||||||
Sbjct: 231 accgtc 226
>gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aestivum cDNA clone G118106C09,
mRNA sequence
Length = 578
Score = 168 bits (85), Expect = 3e-040
Identities = 159/184 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 395 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 454
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 455 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 514
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 515 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 574
Query: 451 accg 454
||||
Sbjct: 575 accg 578
>gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1060
Score = 168 bits (85), Expect = 3e-040
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 301 aacaaccagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcact 360
||||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 801 aacaaccagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcaca 742
Query: 361 cggtgatggtagtcatggaagtccgagccaccgtacagtggaaggaaatttgatgggctc 420
|| |||||||||||||||||||| ||||| || |||||||| ||||| ||||||||||||
Sbjct: 741 cgatgatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctc 682
Query: 421 catggaaagtgatagccgctgtgagcctcnaccgtc 456
|| || |||||||| || |||||||| || ||||||
Sbjct: 681 caagggaagtgatatccactgtgagcttcaaccgtc 646
>gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh8l09 3', mRNA sequence
Length = 513
Score = 167 bits (84), Expect = 1e-039
Identities = 153/176 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 337 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 396
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 397 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 456
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagc 446
|| |||||||| ||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 457 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagc 512
>gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0867_G04_M07, mRNA sequence
Length = 368
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 363 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 304
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 303 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 244
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 243 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatcccctgtgagcttca 184
Query: 451 accgtc 456
||||||
Sbjct: 183 accgtc 178
>gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2818_B02_C04, mRNA
sequence
Length = 729
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 627 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 568
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 567 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 508
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 507 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 448
Query: 451 accgtc 456
||||||
Sbjct: 447 accgtc 442
>gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe7f22 3', mRNA sequence
Length = 730
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 317 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 376
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 377 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 436
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 437 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 496
Query: 451 accgtc 456
||||||
Sbjct: 497 accgtc 502
>gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 5', mRNA sequence
Length = 584
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 240 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 181
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 180 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 121
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 120 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 61
Query: 451 accgtc 456
||||||
Sbjct: 60 accgtc 55
>gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 5', mRNA sequence
Length = 570
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 229 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 170
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 169 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 110
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 109 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 50
Query: 451 accgtc 456
||||||
Sbjct: 49 accgtc 44
>gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 3', mRNA sequence
Length = 551
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 323 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 382
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 383 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 442
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 443 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 502
Query: 451 accgtc 456
||||||
Sbjct: 503 accgtc 508
>gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aestivum cDNA clone waw1c.pk004.c14
5' end, mRNA sequence
Length = 649
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 392 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 333
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 332 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 273
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 272 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 213
Query: 451 accgtc 456
||||||
Sbjct: 212 accgtc 207
>gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aestivum cDNA clone G118120C17,
mRNA sequence
Length = 629
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 328 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 387
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 388 gcgtagttccctgacttggtgtaaagcacacgatgatggtagtcatggaagtcagagcct 447
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| |||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 448 ccatacagtggccggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 507
Query: 451 accgtc 456
||||||
Sbjct: 508 accgtc 513
>gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 165 bits (83), Expect = 4e-039
Identities = 160/186 (86%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 657 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 598
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 597 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 538
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcn 450
|| |||||||| ||||| |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 537 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttca 478
Query: 451 accgtc 456
||||||
Sbjct: 477 accgtc 472
>gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aestivum cDNA clone
wre1n.pk0057.d11 5' end, mRNA sequence
Length = 535
Score = 161 bits (81), Expect = 6e-038
Identities = 138/156 (88%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 301 aacaaccagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcact 360
||||||||||||||||||||||| || ||||| ||||| |||||||| |||||||||||
Sbjct: 407 aacaaccagtccatgtaaacaaa-gtagaggcgtagtttcctgacttggtgtacagcaca 349
Query: 361 cggtgatggtagtcatggaagtccgagccaccgtacagtggaaggaaatttgatgggctc 420
|| |||||||||||||||||||| ||||| || |||||||| ||||| ||||||||||||
Sbjct: 348 cgatgatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctc 289
Query: 421 catggaaagtgatagccgctgtgagcctcnaccgtc 456
|| || |||||||| || |||||||| || ||||||
Sbjct: 288 caagggaagtgatatccactgtgagcttcaaccgtc 253
>gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum cDNA clone TaE05004B01F, mRNA
sequence
Length = 523
Score = 159 bits (80), Expect = 2e-037
Identities = 143/164 (87%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 354 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 413
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 414 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 473
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgata 434
|| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 474 ccatacagtggcaggaagtttgatgggctccaagggaagtgata 517
>gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 3', mRNA sequence
Length = 472
Score = 159 bits (80), Expect = 2e-037
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| ||||||||| || ||||| || | ||||||||||||||||||||||| || |||
Sbjct: 292 tttgtcttgcgatagcccttgtctgtgccaaacaaccagtccatgtaaacaaaagtagag 351
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||
Sbjct: 352 gcgtagttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcct 411
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagc 446
|| |||||||| ||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 412 ccatacagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagc 467
>gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1127
Score = 155 bits (78), Expect = 4e-036
Identities = 156/181 (86%), Gaps = 1/181 (0%)
Strand = Plus / Minus
Query: 276 cttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgaggcata 335
||||||||| || ||||| || | ||||||||||||||||||||||| || ||||| ||
Sbjct: 906 cttgcgatagcctttgtctgtgccaaacaaccagtccatgtaaacaaa-gtagaggcgta 848
Query: 336 gttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagccaccgta 395
|||||||||||| ||||| ||||| || ||||| |||||||||||||| ||||| || ||
Sbjct: 847 gttccctgacttggtgtagagcacacgatgatgatagtcatggaagtcagagcctccata 788
Query: 396 cagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnaccgt 455
|||||| ||||| |||||||||||||| || |||||||| || |||||||| || |||||
Sbjct: 787 cagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttcaaccgt 728
Query: 456 c 456
|
Sbjct: 727 c 727
>gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum cDNA clone TaE05038F12F, mRNA
sequence
Length = 443
Score = 151 bits (76), Expect = 6e-035
Identities = 142/164 (86%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 274 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 333
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| ||||
Sbjct: 334 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcaaagcct 393
Query: 391 ccgtacagtggaaggaaatttgatgggctccatggaaagtgata 434
|| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 394 ccatacagtggcaggaagtttgatgggctccaagggaagtgata 437
>gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 893
Score = 145 bits (73), Expect = 4e-033
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 546 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 605
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| |||||||||||||| ||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 606 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtcagagcct 665
Query: 391 ccgtacagtggaaggaaatttgatgggct 419
|| |||||||| ||||| |||||||||||
Sbjct: 666 ccatacagtggcaggaagtttgatgggct 694
>gb|BJ253797.1|BJ253797 BJ253797 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3f07 3', mRNA sequence
Length = 568
Score = 137 bits (69), Expect = 9e-031
Identities = 133/153 (86%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 386 tttgtcttgcgataacccttatctgtgccaaacaaccagtccatgtaaacaaaagtagag 445
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtccgagcca 390
|| ||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||
Sbjct: 446 gcgtagtttcctgacttggtgtacagcacacgatgatggtagtcatggaagtcagagcct 505
Query: 391 ccgtacagtggaaggaa-atttgatgggctcca 422
|| |||||||| ||||| ||||||||||||||
Sbjct: 506 ccatacagtggcaggaagttttgatgggctcca 538
>gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 123 bits (62), Expect = 1e-026
Identities = 135/157 (85%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 301 aacaaccagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcact 360
||||||||||||||||||||||| || ||||| ||| |||||||||| ||||| |||||
Sbjct: 882 aacaaccagtccatgtaaacaaaagtagaggcgtaggtccctgacttggtgtagagcaca 823
Query: 361 cggtgatggtagtcatggaagtccgagccaccgtacagtggaaggaaatttgat-gggct 419
|| ||||| |||||||||||||| ||||| || |||||||| ||| || ||||| |||||
Sbjct: 822 cgatgatgatagtcatggaagtcagagcctccatacagtggcagg-aagttgatggggct 764
Query: 420 ccatggaaagtgatagccgctgtgagcctcnaccgtc 456
||| || |||||||| || |||||||| || ||||||
Sbjct: 763 ccaagggaagtgatatccactgtgagcttcaaccgtc 727
>gb|CA646903.1|CA646903 wre1n.pk0118.b6 wre1n Triticum aestivum cDNA clone wre1n.pk0118.b6
5' end, mRNA sequence
Length = 506
Score = 113 bits (57), Expect = 1e-023
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||||||||||||||||||| || |||
Sbjct: 114 tttgtcttgcgataacccttatcggtgccaaacaaccagtccatgtaaacaaaagtagag 55
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtc 383
|| |||||||||||||| ||||| ||||| || ||||||||||||||||||||
Sbjct: 54 gcgtagttccctgacttggtgtagagcacacgatgatggtagtcatggaagtc 2
>gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_F12_K24, mRNA sequence
Length = 546
Score = 105 bits (53), Expect = 3e-021
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 353 acagcactcggtgatggtagtcatggaagtccgagccaccgtacagtggaaggaaatttg 412
||||||| || |||||||||||||||||||| ||||| || |||||||| ||||| ||||
Sbjct: 546 acagcacacgatgatggtagtcatggaagtcagagcctccatacagtggcaggaagtttg 487
Query: 413 atgggctccatggaaagtgatagccgctgtgagcctcnaccgtc 456
|||||||||| || |||||||| || |||||||| || ||||||
Sbjct: 486 atgggctccaagggaagtgatatccactgtgagcttcaaccgtc 443
>gb|BQ807205.1|BQ807205 WHE3588_A10_A20ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3588_A10_A20, mRNA sequence
Length = 779
Score = 85.7 bits (43), Expect = 3e-015
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 371 agtcatggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagt 430
||||||||||||| ||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 779 agtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaagggaagt 720
Query: 431 gatagccgctgtgagcctcnaccgtc 456
|||| || |||||||| || ||||||
Sbjct: 719 gatatccactgtgagcttcaaccgtc 694
>gb|BJ254078.1|BJ254078 BJ254078 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4f07 3', mRNA sequence
Length = 381
Score = 83.8 bits (42), Expect = 1e-014
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 271 tttgccttgcgataaccattgtccgtccggaacaaccagtccatgtaaacaaatgtcgag 330
|||| |||||||||||| || || || | ||||||| ||||||||||||||| || |||
Sbjct: 278 tttgtcttgcgataacccttatctgtgccaaacaaccngtccatgtaaacaaaagtagag 337
Query: 331 gcatagttccctgactttgtgtacagcactcggtgatggtagtc 374
|| || || |||||||| ||||||||||| || |||||||||||
Sbjct: 338 gcgtantttcctgacttggtgtacagcacacgatgatggtagtc 381
>gb|BE445679.1|BE445679 WHE1452_F02_K04ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_F02_K04,
mRNA sequence
Length = 172
Score = 60.0 bits (30), Expect = 2e-007
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 396 cagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnaccgt 455
|||||| ||||| |||||||||||||| || |||||||| || |||||||| || |||||
Sbjct: 172 cagtggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttcaaccgt 113
Query: 456 c 456
|
Sbjct: 112 c 112
>gb|CK193804.1|CK193804 FGAS002221 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 301 aacaaccagtccatgtaaacaaatgtcgaggcatagttccctgactt 347
||||||||||||||||||||||| || ||||| | ||||| ||||||
Sbjct: 522 aacaaccagtccatgtaaacaaaagttgaggcgttgttccttgactt 568
>gb|CF134081.1|CF134081 WHE4367_E04_I07ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4367_E04_I07, mRNA sequence
Length = 741
Score = 46.1 bits (23), Expect = 0.003
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 411 tgatgggctccatggaaagtgatagccgctgtgagcctcnaccgtc 456
|||||||||||| || |||||||| || |||||||| || ||||||
Sbjct: 741 tgatgggctccaagggaagtgatatccactgtgagcttcaaccgtc 696
>gb|CA618261.1|CA618261 wl1n.pk0031.e9 wl1n Triticum aestivum cDNA clone wl1n.pk0031.e9 5'
end, mRNA sequence
Length = 534
Score = 42.1 bits (21), Expect = 0.040
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 363 gtgatggtagtcatggaagtccgagccaccgta 395
|||||||||||| ||||| |||| |||||||||
Sbjct: 239 gtgatggtagtcgtggaattccgcgccaccgta 207
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 65,704
Number of Sequences: 636343
Number of extensions: 65704
Number of successful extensions: 16504
Number of sequences better than 0.5: 39
Number of HSP's better than 0.5 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16440
Number of HSP's gapped (non-prelim): 61
length of query: 562
length of database: 367,240,239
effective HSP length: 19
effective length of query: 543
effective length of database: 355,149,722
effective search space: 192846299046
effective search space used: 192846299046
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)