BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3858636.2.1
(907 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sor... 864 0.0
gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 ... 848 0.0
gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle... 827 0.0
gb|CW234030.1|CW234030 104_687_11213762_148_37379_005 Sorgh... 745 0.0
gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2... 733 0.0
gb|CW314845.1|CW314845 104_805_11472043_148_35821_070 Sorgh... 716 0.0
gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sor... 571 e-161
gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1... 567 e-160
gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced ... 553 e-155
gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1... 549 e-154
gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle... 498 e-139
gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1... 472 e-131
gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sor... 377 e-102
gb|BE359155.1|BE359155 DG1_39_C05.b1_A002 Dark Grown 1 (DG1... 371 e-101
gb|CN131413.1|CN131413 RHOH1_48_A02.b1_A002 Acid- and alkal... 250 2e-064
gb|BG103102.1|BG103102 RHIZ2_18_B11.g1_A003 Rhizome2 (RHIZ2... 244 1e-062
gb|CD221354.1|CD221354 CCC1_54_F07.b1_A007 Callus culture/c... 244 1e-062
gb|CD223110.1|CD223110 CCC1_26_F03.b1_A007 Callus culture/c... 244 1e-062
gb|CD224320.1|CD224320 CCC1_33_H03.b1_A007 Callus culture/c... 244 1e-062
gb|CD224791.1|CD224791 CCC1_36_B03.b1_A007 Callus culture/c... 244 1e-062
gb|CW297734.1|CW297734 104_780_11462198_148_35653_063 Sorgh... 242 5e-062
gb|CW436719.1|CW436719 fsbb001f153h11k0 Sorghum methylation... 242 5e-062
gb|BE355038.1|BE355038 DG1_10_B12.g1_A002 Dark Grown 1 (DG1... 242 5e-062
gb|BE355327.1|BE355327 DG1_114_H09.b1_A002 Dark Grown 1 (DG... 242 5e-062
gb|BE355405.1|BE355405 DG1_114_H09.b2_A002 Dark Grown 1 (DG... 242 5e-062
gb|BE355461.1|BE355461 DG1_114_C11.g1_A002 Dark Grown 1 (DG... 242 5e-062
gb|BE358732.1|BE358732 DG1_31_D02.g1_A002 Dark Grown 1 (DG1... 242 5e-062
gb|BE361202.1|BE361202 DG1_70_F03.g1_A002 Dark Grown 1 (DG1... 242 5e-062
gb|BE367050.1|BE367050 PI1_42_D08.g2_A002 Pathogen induced ... 242 5e-062
gb|BE592930.1|BE592930 WS1_92_B10.b1_A002 Water-stressed 1 ... 242 5e-062
gb|BG239851.1|BG239851 OV1_29_G11.g1_A002 Ovary 1 (OV1) Sor... 242 5e-062
gb|BG356951.1|BG356951 OV2_12_A10.g1_A002 Ovary 2 (OV2) Sor... 242 5e-062
gb|BG932930.1|BG932930 DG1_69_B03.g1_A002 Dark Grown 1 (DG1... 242 5e-062
gb|CF072290.1|CF072290 FE1_7_F11.b1_A002 Iron-deficient see... 242 5e-062
gb|CN125016.1|CN125016 RHOH1_8_H01.b1_A002 Acid- and alkali... 242 5e-062
gb|CN126243.1|CN126243 RHOH1_16_B03.b1_A002 Acid- and alkal... 242 5e-062
gb|CN129246.1|CN129246 RHOH1_34_G08.b3_A002 Acid- and alkal... 242 5e-062
gb|CN129330.1|CN129330 RHOH1_34_G08.g1_A002 Acid- and alkal... 242 5e-062
gb|CN138952.1|CN138952 OX1_15_D09.b1_A002 Oxidatively-stres... 242 5e-062
gb|BM318326.1|BM318326 PI1_77_C08.g9_A002 Pathogen induced ... 236 3e-060
gb|CX619982.1|CX619982 GABR1_49_D04.b1_A002 GA- or brassino... 236 3e-060
gb|BE359598.1|BE359598 DG1_54_H12.g2_A002 Dark Grown 1 (DG1... 234 1e-059
gb|CX608397.1|CX608397 ANR1_38_H10.b1_A002 Anaerobic roots ... 234 1e-059
gb|CX622505.1|CX622505 GABR1_64_H04.b2_A002 GA- or brassino... 226 3e-057
gb|AW745482.1|AW745482 WS1_35_G01.b1_A002 Water-stressed 1 ... 224 1e-056
gb|BE360475.1|BE360475 DG1_63_E06.g1_A002 Dark Grown 1 (DG1... 224 1e-056
gb|BG932961.1|BG932961 DG1_69_E04.g1_A002 Dark Grown 1 (DG1... 224 1e-056
gb|BE356652.1|BE356652 DG1_126_A06.g1_A002 Dark Grown 1 (DG... 222 4e-056
gb|CD431991.1|CD431991 ETH1_12_C08.b1_A002 Ethylene-treated... 222 4e-056
gb|BG412632.1|BG412632 OV2_36_H06.g1_A002 Ovary 2 (OV2) Sor... 220 2e-055
gb|BG052269.1|BG052269 RHIZ2_12_D09.g1_A003 Rhizome2 (RHIZ2... 214 1e-053
gb|CD426231.1|CD426231 SA1_19_D09.b1_A002 Salicylic acid-tr... 206 3e-051
gb|BF585486.1|BF585486 FM1_23_B02.g1_A003 Floral-Induced Me... 204 1e-050
gb|BF704912.1|BF704912 FM1_46_B04.g2_A003 Floral-Induced Me... 204 1e-050
gb|CD220727.1|CD220727 CCC1_69_D11.b1_A007 Callus culture/c... 204 1e-050
gb|CW322471.1|CW322471 104_816_11476115_148_35952_044 Sorgh... 200 2e-049
gb|CW297733.1|CW297733 104_780_11462198_116_35649_063 Sorgh... 196 2e-048
gb|AW565319.1|AW565319 LG1_342_A09.g1_A002 Light Grown 1 (L... 196 2e-048
gb|AW677269.1|AW677269 DG1_6_C02.g1_A002 Dark Grown 1 (DG1)... 196 2e-048
gb|AW922837.1|AW922837 DG1_46_C11.g1_A002 Dark Grown 1 (DG1... 196 2e-048
gb|AW923056.1|AW923056 DG1_48_F12.g1_A002 Dark Grown 1 (DG1... 196 2e-048
gb|BE355472.1|BE355472 DG1_114_H09.g1_A002 Dark Grown 1 (DG... 196 2e-048
gb|BE355572.1|BE355572 DG1_115_C11.b1_A002 Dark Grown 1 (DG... 196 2e-048
gb|BE360126.1|BE360126 DG1_61_D02.g1_A002 Dark Grown 1 (DG1... 196 2e-048
gb|BE360152.1|BE360152 DG1_61_D02.g2_A002 Dark Grown 1 (DG1... 196 2e-048
gb|BE360990.1|BE360990 DG1_68_E08.g1_A002 Dark Grown 1 (DG1... 196 2e-048
gb|BG054269.1|BG054269 OV2_4_D10.g1_A002 Ovary 2 (OV2) Sorg... 196 2e-048
gb|BG158592.1|BG158592 RHIZ2_42_E08.g1_A003 Rhizome2 (RHIZ2... 196 2e-048
gb|BG947157.1|BG947157 IP1_3_C03.g1_A002 Immature pannicle ... 196 2e-048
gb|BI075504.1|BI075504 IP1_21_D02.g1_A002 Immature pannicle... 196 2e-048
gb|BI099244.1|BI099244 IP1_40_D02.g1_A002 Immature pannicle... 196 2e-048
gb|BI211453.1|BI211453 IP1_57_A06.g1_A002 Immature pannicle... 196 2e-048
gb|BI245526.1|BI245526 IP1_66_E07.g1_A002 Immature pannicle... 196 2e-048
gb|CD426221.1|CD426221 SA1_19_A02.b1_A002 Salicylic acid-tr... 196 2e-048
gb|CF072697.1|CF072697 FE1_25_E09.b1_A002 Iron-deficient se... 196 2e-048
gb|CF074261.1|CF074261 FE1_23_H08.b1_A002 Iron-deficient se... 196 2e-048
gb|CF427528.1|CF427528 PH1_16_G05.b1_A002 Phosphorous-defic... 196 2e-048
gb|CF431298.1|CF431298 NIT1_5_B12.b1_A002 Nitrogen-deficien... 196 2e-048
gb|BG049661.1|BG049661 EM1_7_D05.g1_A002 Embryo 1 (EM1) Sor... 192 4e-047
gb|CW220801.1|CW220801 104_655_11197555_116_37153_070 Sorgh... 186 2e-045
gb|CW220802.1|CW220802 104_655_11197555_148_37154_070 Sorgh... 182 4e-044
gb|BE366988.1|BE366988 PI1_42_D08.g1_A002 Pathogen induced ... 172 4e-041
gb|BF656584.1|BF656584 FM1_51_H09.g1_A003 Floral-Induced Me... 167 2e-039
gb|CW150733.1|CW150733 104_551_11143570_116_36314_043 Sorgh... 153 3e-035
gb|CW463400.1|CW463400 fsbb001f211p20f0 Sorghum methylation... 153 3e-035
gb|BE362573.1|BE362573 DG1_87_D07.g1_A002 Dark Grown 1 (DG1... 153 3e-035
gb|BI351177.1|BI351177 IP1_70_H04.g1_A002 Immature pannicle... 151 1e-034
gb|BI351078.1|BI351078 IP1_69_E08.g1_A002 Immature pannicle... 147 2e-033
gb|AW285466.2|AW285466 LG1_251_H09.g1_A002 Light Grown 1 (L... 143 3e-032
gb|BG241551.1|BG241551 RHIZ2_17_A01.g1_A003 Rhizome2 (RHIZ2... 141 1e-031
gb|CL164480.1|CL164480 104_358_10807939_114_31814_307 Sorgh... 137 2e-030
gb|CW091315.1|CW091315 104_453_10998477_114_33030_093 Sorgh... 137 2e-030
gb|CW176959.1|CW176959 104_590_11158763_148_36591_046 Sorgh... 137 2e-030
gb|CW460986.1|CW460986 fsbb001f208h04f0 Sorghum methylation... 137 2e-030
gb|BE358396.1|BE358396 DG1_29_B04.g1_A002 Dark Grown 1 (DG1... 137 2e-030
gb|BE358841.1|BE358841 DG1_32_D06.g1_A002 Dark Grown 1 (DG1... 137 2e-030
gb|BE360494.1|BE360494 DG1_63_B03.g1_A002 Dark Grown 1 (DG1... 137 2e-030
gb|BE918444.1|BE918444 OV1_3_G09.g1_A002 Ovary 1 (OV1) Sorg... 137 2e-030
gb|BE364574.2|BE364574 PI1_15_H09.g1_A002 Pathogen induced ... 137 2e-030
gb|BG487962.1|BG487962 RHIZ2_61_D12.g1_A003 Rhizome2 (RHIZ2... 135 8e-030
gb|DN551872.1|DN551872 pSPR-RT-MR-H1_G04_C276 pSPR Sorghum ... 135 8e-030
gb|BF587927.1|BF587927 FM1_34_F02.g1_A003 Floral-Induced Me... 133 3e-029
gb|BG101760.1|BG101760 RHIZ2_21_A04.g1_A003 Rhizome2 (RHIZ2... 133 3e-029
gb|BG159391.1|BG159391 OV2_7_C05.g1_A002 Ovary 2 (OV2) Sorg... 129 5e-028
gb|CW482625.1|CW482625 fsbb001f242n03k0 Sorghum methylation... 127 2e-027
gb|CL173774.1|CL173774 104_377_10891106_116_31793_242 Sorgh... 125 8e-027
gb|CL173775.1|CL173775 104_377_10891106_148_31792_242 Sorgh... 125 8e-027
gb|CW315423.1|CW315423 104_806_11472351_148_35827_056 Sorgh... 125 8e-027
gb|BE362449.1|BE362449 DG1_86_G01.g1_A002 Dark Grown 1 (DG1... 125 8e-027
gb|BG557612.1|BG557612 EM1_54_A03.g1_A002 Embryo 1 (EM1) So... 125 8e-027
gb|BG356009.2|BG356009 EM1_19_C06.g1_A002 Embryo 1 (EM1) So... 125 8e-027
gb|CD226034.1|CD226034 CCC1_43_C09.b1_A007 Callus culture/c... 125 8e-027
gb|BG558757.1|BG558757 RHIZ2_56_B07.b1_A003 Rhizome2 (RHIZ2... 121 1e-025
gb|CD463381.1|CD463381 ETH1_44_H01.b1_A002 Ethylene-treated... 119 5e-025
gb|CW150734.1|CW150734 104_551_11143570_148_36313_043 Sorgh... 111 1e-022
gb|CW460987.1|CW460987 fsbb001f208h04k0 Sorghum methylation... 111 1e-022
gb|BG558058.1|BG558058 RHIZ2_66_B02.g1_A003 Rhizome2 (RHIZ2... 109 5e-022
gb|BF481310.1|BF481310 FM1_18_D04.g1_A003 Floral-Induced Me... 107 2e-021
gb|CW410953.1|CW410953 fsbb001f105o16f0 Sorghum methylation... 98 2e-018
gb|CW246218.1|CW246218 104_707_11221250_116_35083_013 Sorgh... 90 4e-016
gb|CW322470.1|CW322470 104_816_11476115_116_35953_044 Sorgh... 90 4e-016
gb|CW388607.1|CW388607 fsbb001f073h01k0 Sorghum methylation... 90 4e-016
gb|CW442302.1|CW442302 fsbb001f161o10k0 Sorghum methylation... 90 4e-016
gb|CW234029.1|CW234029 104_687_11213762_116_37380_005 Sorgh... 88 2e-015
gb|BG355763.2|BG355763 EM1_19_C06.b1_A002 Embryo 1 (EM1) So... 84 3e-014
gb|AW922566.1|AW922566 DG1_45_G07.g1_A002 Dark Grown 1 (DG1... 80 4e-013
gb|BE362992.2|BE362992 DG1_92_F01.g1_A002 Dark Grown 1 (DG1... 74 2e-011
gb|CW380095.1|CW380095 fsbb001f059l10k0 Sorghum methylation... 72 1e-010
gb|AW923013.1|AW923013 DG1_48_F12.b1_A002 Dark Grown 1 (DG1... 68 2e-009
gb|BE360089.1|BE360089 DG1_61_D02.b1_A002 Dark Grown 1 (DG1... 68 2e-009
gb|BE360375.1|BE360375 DG1_63_E06.b1_A002 Dark Grown 1 (DG1... 68 2e-009
gb|BI246012.1|BI246012 IP1_66_E07.b1_A002 Immature pannicle... 68 2e-009
gb|CN135116.1|CN135116 OX1_30_E02.g1_A002 Oxidatively-stres... 66 6e-009
gb|BG947536.1|BG947536 IP1_5_F11.g1_A002 Immature pannicle ... 64 2e-008
gb|CW221367.1|CW221367 104_656_11197867_116_37452_074 Sorgh... 60 4e-007
gb|CW437890.1|CW437890 fsbb001f155d19f0 Sorghum methylation... 58 1e-006
gb|BE358315.1|BE358315 DG1_29_B04.b1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE367374.1|BE367374 PI1_4_E12.g1_A002 Pathogen induced 1... 58 1e-006
gb|BE918238.1|BE918238 OV1_3_G09.b1_A002 Ovary 1 (OV1) Sorg... 58 1e-006
gb|BF585576.1|BF585576 FM1_23_B02.b1_A003 Floral-Induced Me... 58 1e-006
gb|BM318639.1|BM318639 PI1_15_H09.b9_A002 Pathogen induced ... 58 1e-006
gb|BM323365.1|BM323365 PIC1_18_D12.b1_A002 Pathogen-infecte... 58 1e-006
gb|CW305621.1|CW305621 104_791_11466407_116_36270_096 Sorgh... 56 6e-006
gb|CW332556.1|CW332556 104_830_11481481_116_36040_011 Sorgh... 56 6e-006
gb|CW332557.1|CW332557 104_830_11481481_148_36039_011 Sorgh... 56 6e-006
gb|CW468754.1|CW468754 fsbb001f221b22k0 Sorghum methylation... 56 6e-006
gb|AW922611.1|AW922611 DG1_46_C11.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|AW923179.1|AW923179 DG1_50_B05.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|AW923213.1|AW923213 DG1_50_G06.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|BE358045.1|BE358045 DG1_24_G03.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|BE359187.1|BE359187 DG1_39_E05.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|BE362494.1|BE362494 DG1_87_D07.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|CD204049.1|CD204049 HS1_3_A02.g1_A012 Heat-shocked seedl... 56 6e-006
gb|CD220820.1|CD220820 CCC1_69_D11.g1_A007 Callus culture/c... 56 6e-006
gb|CD223218.1|CD223218 CCC1_26_F03.g1_A007 Callus culture/c... 56 6e-006
gb|CD224344.1|CD224344 CCC1_33_H03.g1_A007 Callus culture/c... 56 6e-006
gb|CD224815.1|CD224815 CCC1_36_B03.g1_A007 Callus culture/c... 56 6e-006
gb|CD236038.1|CD236038 SS1_25_C08.g1_A012 Salt-stressed see... 56 6e-006
gb|CD426286.1|CD426286 SA1_19_A02.g1_A002 Salicylic acid-tr... 56 6e-006
gb|CD426290.1|CD426290 SA1_19_D09.g1_A002 Salicylic acid-tr... 56 6e-006
gb|CD432039.1|CD432039 ETH1_12_C08.g1_A002 Ethylene-treated... 56 6e-006
gb|CF431328.1|CF431328 NIT1_5_B12.g1_A002 Nitrogen-deficien... 56 6e-006
gb|CN125102.1|CN125102 RHOH1_8_H01.g1_A002 Acid- and alkali... 56 6e-006
gb|CN126325.1|CN126325 RHOH1_16_B03.g1_A002 Acid- and alkal... 56 6e-006
gb|CN133874.1|CN133874 OX1_18_H01.g1_A002 Oxidatively-stres... 56 6e-006
gb|CX608491.1|CX608491 ANR1_38_H10.g1_A002 Anaerobic roots ... 56 6e-006
gb|CX612256.1|CX612256 GABR1_1_A01.g1_A002 GA- or brassinol... 56 6e-006
gb|CX622596.1|CX622596 GABR1_64_H04.g2_A002 GA- or brassino... 56 6e-006
gb|CW309205.1|CW309205 104_798_11469073_148_36240_015 Sorgh... 54 2e-005
gb|CW789152.1|CW789152 SP__Ba0054I21.f SP__Ba Sorghum propi... 54 2e-005
gb|CD204024.1|CD204024 HS1_3_A02.b1_A012 Heat-shocked seedl... 54 2e-005
gb|CW094098.1|CW094098 104_457_11000129_116_37473_071 Sorgh... 52 9e-005
gb|CW246220.1|CW246220 104_707_11221250_148_35087_013 Sorgh... 52 9e-005
gb|CW248323.1|CW248323 104_709_11222237_116_35031_021 Sorgh... 52 9e-005
gb|CW248324.1|CW248324 104_709_11222237_148_35027_021 Sorgh... 52 9e-005
gb|CW314517.1|CW314517 104_805_11471871_116_35877_060 Sorgh... 52 9e-005
gb|CW333504.1|CW333504 104_831_11481990_116_36049_021 Sorgh... 52 9e-005
gb|CW333505.1|CW333505 104_831_11481990_148_36050_021 Sorgh... 52 9e-005
gb|CW463146.1|CW463146 fsbb001f211j15k0 Sorghum methylation... 52 9e-005
gb|BE126229.1|BE126229 DG1_68_E08.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BE358778.1|BE358778 DG1_32_D06.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BE360428.1|BE360428 DG1_63_B03.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|CL171119.1|CL171119 104_372_10889195_148_31778_251 Sorgh... 50 4e-004
gb|CW034489.1|CW034489 104_264_10502577_114_30358 Sorghum m... 50 4e-004
gb|CW038405.1|CW038405 104_270_10504907_114_30385 Sorghum m... 50 4e-004
gb|CW175788.1|CW175788 104_588_11158139_116_36574_040 Sorgh... 50 4e-004
gb|AW671697.1|AW671697 LG1_349_B05.b1_A002 Light Grown 1 (L... 50 4e-004
gb|AW922443.1|AW922443 DG1_19_G03.g1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|AW922722.1|AW922722 DG1_45_G07.b1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|BE362394.1|BE362394 DG1_86_G01.b1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|BG159037.1|BG159037 RHIZ2_17_A01.b1_A003 Rhizome2 (RHIZ2... 50 4e-004
gb|BG557502.1|BG557502 EM1_54_A03.b1_A002 Embryo 1 (EM1) So... 50 4e-004
gb|CW049815.1|CW049815 104_289_10514278_114_30202 Sorghum m... 48 0.001
gb|CD209484.1|CD209484 HS1_42_G07.g1_A012 Heat-shocked seed... 48 0.001
gb|CN134527.1|CN134527 OX1_26_H12.g1_A002 Oxidatively-stres... 48 0.001
gb|CW072359.1|CW072359 104_325_10592223_116_30539 Sorghum m... 46 0.006
gb|CW091307.1|CW091307 104_453_10998472_116_33035_062 Sorgh... 46 0.006
gb|CW389640.1|CW389640 fsbb001f074o21k0 Sorghum methylation... 46 0.006
gb|CW457821.1|CW457821 fsbb001f203m21f0 Sorghum methylation... 46 0.006
gb|CW474770.1|CW474770 fsbb001f230n01k0 Sorghum methylation... 46 0.006
gb|CW257415.1|CW257415 104_722_11227323_116_35152_002 Sorgh... 44 0.022
gb|AW672134.1|AW672134 LG1_357_D06.b1_A002 Light Grown 1 (L... 44 0.022
gb|CW050158.1|CW050158 104_289_10514483_114_30197 Sorghum m... 42 0.088
gb|CW119027.1|CW119027 104_495_11108529_148_34700_035 Sorgh... 42 0.088
gb|BE594234.1|BE594234 WS1_103_H10.b1_A002 Water-stressed 1... 42 0.088
gb|BZ336713.1|BZ336713 hz38f12.g1 WGS-SbicolorF (JM107 adap... 40 0.35
gb|CL150115.1|CL150115 104_331_10778292_116_31356_228 Sorgh... 40 0.35
gb|CW034804.1|CW034804 104_265_10502777_115_30379 Sorghum m... 40 0.35
gb|CW070302.1|CW070302 104_321_10526667_5_30098 Sorghum met... 40 0.35
gb|CW299764.1|CW299764 104_782_11463290_148_35687_001 Sorgh... 40 0.35
gb|CW415154.1|CW415154 fsbb001f115c02f0 Sorghum methylation... 40 0.35
gb|AW677396.1|AW677396 DG1_6_C02.b1_A002 Dark Grown 1 (DG1)... 40 0.35
gb|AW679038.1|AW679038 WS1_22_H02.b1_A002 Water-stressed 1 ... 40 0.35
gb|BE354954.1|BE354954 DG1_10_B12.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BE358230.1|BE358230 DG1_26_E05.b2_A002 Dark Grown 1 (DG1... 40 0.35
>gb|BG047581.1|BG047581 OV1_25_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 864 bits (436), Expect = 0.0
Identities = 526/556 (94%), Gaps = 2/556 (0%)
Strand = Plus / Plus
Query: 73 ctcaagagcgccg-caagagctgcgtgatggcgg-ggccaggaaggtgctgaccaccagc 130
||||||||||||| ||||| |||||||||||||| ||||||||| ||||| ||||| |||
Sbjct: 11 ctcaagagcgccgtcaagaactgcgtgatggcggcggccaggaaagtgctcaccactagc 70
Query: 131 ctcggcggcgacctccacagcgcgcgcttcagcgagaaggccctgctcaccgccatcgac 190
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ctcgacggcgacctccacagcgcgcgcttcagcgagaaggccctgctcaccgccatcgac 130
Query: 191 cgcgaggcggtgtacgggtactacgacgacccctgcagcgccaactcgcccctgatgaag 250
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cgcgaggccgtgtacgggtactacgacgacccctgcagcgccaactcgcccctgatgaag 190
Query: 251 aagatccgggccgtgctggtggaccacgnnnnnnnnagcggcgaggccgagaaggacgcc 310
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 191 aagatccgcgccgtgctggtggaccacgccctcgccagcggcgaggccgagaaggacgcc 250
Query: 311 agcgcgtccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgccc 370
||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 251 agcgcgtccgtcttctccaagatcaacaggttcgaggaggcgctaagggaggcgctgccc 310
Query: 371 agggagatggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacagg 430
|||||||||||||||||||||||||| |||||||| ||| | |||||||||| |||||||
Sbjct: 311 agggagatggaggccgcccgcgtggcgttcgagacgggcacggcgccgatcggcaacagg 370
Query: 431 atcaaggagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtg 490
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atcaaggacagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtg 430
Query: 491 tacctgaccggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggcc 550
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tacctgaccggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggcg 490
Query: 551 ctcagcgagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaag 610
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 491 ctcagcgagggcaagctcatcgaccccatgctcgagtgcctcaaggagtgggacggcaag 550
Query: 611 cccctgcccatctgct 626
||||||||||||||||
Sbjct: 551 cccctgcccatctgct 566
>gb|AW677701.1|AW677701 WS1_10_H08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 848 bits (428), Expect = 0.0
Identities = 508/536 (94%), Gaps = 1/536 (0%)
Strand = Plus / Minus
Query: 92 ctgcgtgatggcgg-ggccaggaaggtgctgaccaccagcctcggcggcgacctccacag 150
|||||||||||||| ||||||||| ||||| ||||| ||||||| |||||||||||||||
Sbjct: 566 ctgcgtgatggcggcggccaggaaagtgctcaccactagcctcgacggcgacctccacag 507
Query: 151 cgcgcgcttcagcgagaaggccctgctcaccgccatcgaccgcgaggcggtgtacgggta 210
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 506 cgcgcgcttcagcgagaaggccctgctcaccgccatcgaccgcgaggccgtgtacgggta 447
Query: 211 ctacgacgacccctgcagcgccaactcgcccctgatgaagaagatccgggccgtgctggt 270
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 446 ctacgacgacccctgcagcgccaactcgcccctgatgaagaagatccgcgccgtgctggt 387
Query: 271 ggaccacgnnnnnnnnagcggcgaggccgagaaggacgccagcgcgtccgtgttctccaa 330
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 386 ggaccacgccctcgccagcggcgaggccgagaaggacgccagcgcgtccgtcttctccaa 327
Query: 331 gatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccgcccg 390
|||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 326 gatcaacaggttcgaggaggcgctaagggaggcgctgcccagggagatggaggccgcccg 267
Query: 391 cgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccggtcgta 450
|||||| |||||||| ||| | |||||||||| ||||||||||||||| |||||||||||
Sbjct: 266 cgtggcgttcgagacgggcacggcgccgatcggcaacaggatcaaggacagccggtcgta 207
Query: 451 cccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagct 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagct 147
Query: 511 caagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagctcat 570
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 146 caagtcccccggcgaggagtgcaacaaggtgttcctggcgctcagcgagggcaagctcat 87
Query: 571 cgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatctgct 626
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 cgaccccatgctcgagtgcctcaaggagtgggacggcaagcccctgcccatctgct 31
>gb|BG948544.1|BG948544 IP1_10_H11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 827 bits (417), Expect = 0.0
Identities = 490/517 (94%)
Strand = Plus / Plus
Query: 110 aggaaggtgctgaccaccagcctcggcggcgacctccacagcgcgcgcttcagcgagaag 169
||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6 aggaaagtgctcaccactagcctcgacggcgacctccacagcgcgcgcttcagcgagaag 65
Query: 170 gccctgctcaccgccatcgaccgcgaggcggtgtacgggtactacgacgacccctgcagc 229
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 66 gccctgctcaccgccatcgaccgcgaggccgtgtacgggtactacgacgacccctgcagc 125
Query: 230 gccaactcgcccctgatgaagaagatccgggccgtgctggtggaccacgnnnnnnnnagc 289
||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 126 gccaactcgcccctgatgaagaagatccgcgccgtgctggtggaccacgccctcgccagc 185
Query: 290 ggcgaggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgaggag 349
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 186 ggcgaggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgaggag 245
Query: 350 gagctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccggc 409
| ||| | |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 246 gcgctaagggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacgggc 305
Query: 410 gccgcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatc 469
| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 306 acggcgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcatc 365
Query: 470 cgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggag 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggag 425
Query: 530 tgcaacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgactgc 589
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 426 tgcaacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgagtgc 485
Query: 590 ctcaaggagtgggacggcaagcccctgcccatctgct 626
|||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctcaaggagtgggacggcaagcccctgcccatctgct 522
>gb|CW234030.1|CW234030 104_687_11213762_148_37379_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213762, DNA
sequence
Length = 644
Score = 745 bits (376), Expect = 0.0
Identities = 466/496 (93%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 56 gccacctcgaggagaacctcaagagcgccg-caagagctgcgtgatggcgg-ggccagga 113
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 147 gccacctcgaggagaacctcaagagcgccgtcaagaactgcgtgatggcggcggccagga 206
Query: 114 aggtgctgaccaccagcctcggcggcgacctccacagcgcgcgcttcagcgagaaggccc 173
| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aagtgctcaccactagcctcgacggcgacctccacagcgcgcgcttcagcgagaaggccc 266
Query: 174 tgctcaccgccatcgaccgcgaggcggtgtacgggtactacgacgacccctgcagcgcca 233
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 267 tgctcaccgccatcgaccgcgaggccgtgtacgggtactacgacgacccctgcagcgcca 326
Query: 234 actcgcccctgatgaagaagatccgggccgtgctggtggaccacgnnnnnnnnagcggcg 293
||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 327 actcgcccctgatgaagaagatccgcgccgtgctggtggaccacgccctcgccagcggcg 386
Query: 294 aggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgaggaggagc 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 387 aggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgaggaggcgc 446
Query: 354 tgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccggcgccg 413
| | |||||||||||||||||||||||||||||||||||||| |||||||| ||| | |
Sbjct: 447 taagggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacgggcacgg 506
Query: 414 cgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatccgcc 473
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 507 cgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcatccgcc 566
Query: 474 aggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgca 626
Query: 534 acaaggtgttcctggc 549
| |||||||||||||
Sbjct: 627 aacaggtgttcctggc 642
>gb|BG102506.1|BG102506 RHIZ2_33_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 606
Score = 733 bits (370), Expect = 0.0
Identities = 443/470 (94%)
Strand = Plus / Plus
Query: 157 cttcagcgagaaggccctgctcaccgccatcgaccgcgaggcggtgtacgggtactacga 216
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 cttcagcgagaaggccctgctcaccgccatcgaccgcgaggccgtgtacgggtactacga 60
Query: 217 cgacccctgcagcgccaactcgcccctgatgaagaagatccgggccgtgctggtggacca 276
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61 cgacccctgcagcgccaactcgcccctgatgaagaagatccgcgccgtgctggtagacca 120
Query: 277 cgnnnnnnnnagcggcgaggccgagaaggacgccagcgcgtccgtgttctccaagatcaa 336
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 cgccctcgccagcggcgaggccgagaaggacgccagcgcgtccgtcttctccaagatcaa 180
Query: 337 caggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggc 396
|||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggttcgaggaggcgctaagggaggcgctgcccagggagatggaggccgcccgcgtggc 240
Query: 397 cttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccggtcgtacccgct 456
|||||||| ||| | ||||| |||| ||||||||||||||| |||||||||||||||||
Sbjct: 241 gttcgagacgggcacggcgcccatcggcaacaggatcaaggacagccggtcgtacccgct 300
Query: 457 gtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtc 360
Query: 517 ccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagctcatcgaccc 576
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 361 ccccggcgaggagtgcaacaaggtgttcctggcgatcagtgagggcaagctcatcgaccc 420
Query: 577 catgctcgactgcctcaaggagtgggacggcaagcccctgcccatctgct 626
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgctcgagtgcctcaaggagtgggacggcaagcccctgcccatctgct 470
Score = 71.9 bits (36), Expect = 1e-010
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 662 gaggaggagatgacaccgtat-gcgcgcgaggaagaaataaagaagggagtatttcggta 720
||||||||||| |||||||| | |||||| |||||||||||||||||||||||| |||
Sbjct: 524 gaggaggagatcacaccgtaccgtacgcgagaaagaaataaagaagggagtatttcagta 583
Query: 721 ttctcaag 728
||||||||
Sbjct: 584 ttctcaag 591
>gb|CW314845.1|CW314845 104_805_11472043_148_35821_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472043, DNA
sequence
Length = 714
Score = 716 bits (361), Expect = 0.0
Identities = 445/473 (94%), Gaps = 2/473 (0%)
Strand = Plus / Minus
Query: 56 gccacctcgaggagaacctcaagagcgccg-caagagctgcgtgatggcgg-ggccagga 113
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 473 gccacctcgaggagaacctcaagagcgccgtcaagaactgcgtgatggcggcggccagga 414
Query: 114 aggtgctgaccaccagcctcggcggcgacctccacagcgcgcgcttcagcgagaaggccc 173
| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aagtgctcaccactagcctcgacggcgacctccacagcgcgcgcttcagcgagaaggccc 354
Query: 174 tgctcaccgccatcgaccgcgaggcggtgtacgggtactacgacgacccctgcagcgcca 233
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 353 tgctcaccgccatcgaccgcgaggccgtgtacgggtactacgacgacccctgcagcgcca 294
Query: 234 actcgcccctgatgaagaagatccgggccgtgctggtggaccacgnnnnnnnnagcggcg 293
||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 293 actcgcccctgatgaagaagatccgcgccgtgctggtggaccacgccctcgccagcggcg 234
Query: 294 aggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgaggaggagc 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 233 aggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgaggaggcgc 174
Query: 354 tgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccggcgccg 413
| | |||||||||||||||||||||||||||||||||||||| |||||||| ||| | |
Sbjct: 173 taagggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacgggcacgg 114
Query: 414 cgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatccgcc 473
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 113 cgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcatccgcc 54
Query: 474 aggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgag 526
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgag 1
>gb|BG047939.1|BG047939 OV1_25_F09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 679
Score = 571 bits (288), Expect = e-161
Identities = 327/340 (96%)
Strand = Plus / Plus
Query: 287 agcggcgaggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgag 346
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 21 agcggcgaggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgag 80
Query: 347 gaggagctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagacc 406
|||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 81 gaggcgctaagggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacg 140
Query: 407 ggcgccgcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttc 466
||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 141 ggcacggcgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttc 200
Query: 467 atccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgag 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgag 260
Query: 527 gagtgcaacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgac 586
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtgcaacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgag 320
Query: 587 tgcctcaaggagtgggacggcaagcccctgcccatctgct 626
||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctcaaggagtgggacggcaagcccctgcccatctgct 360
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 440 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 496
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 497 tgcgatttgaag 508
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 560 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 606
>gb|BG932956.1|BG932956 DG1_69_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 667
Score = 567 bits (286), Expect = e-160
Identities = 325/338 (96%)
Strand = Plus / Plus
Query: 289 cggcgaggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgagga 348
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 cggcgaggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgagga 60
Query: 349 ggagctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccgg 408
|| ||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 61 ggcgctaagggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacggg 120
Query: 409 cgccgcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcat 468
| | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 cacggcgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcat 180
Query: 469 ccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgagga 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgagga 240
Query: 529 gtgcaacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgactg 588
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 gtgcaacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgagtg 300
Query: 589 cctcaaggagtgggacggcaagcccctgcccatctgct 626
||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcaaggagtgggacggcaagcccctgcccatctgct 338
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 418 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 474
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 475 tgcgatttgaag 486
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 538 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 584
>gb|BE366341.1|BE366341 PI1_32_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 553 bits (279), Expect = e-155
Identities = 320/334 (95%)
Strand = Plus / Plus
Query: 293 gaggccgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgaggaggag 352
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 1 gaggccgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgaggaggcg 60
Query: 353 ctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccggcgcc 412
|| | |||||||||| ||||||||||||||||||||||||||| |||||||| ||| |
Sbjct: 61 ctaagggaggcgctgcncagggagatggaggccgcccgcgtggcgttcgagacgggcacg 120
Query: 413 gcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatccgc 472
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 gcgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcatccgc 180
Query: 473 caggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgc 240
Query: 533 aacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgactgcctc 592
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 aacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgagtgcctc 300
Query: 593 aaggagtgggacggcaagcccctgcccatctgct 626
||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggagtgggacggcaagcccctgcccatctgct 334
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 414 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 470
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 471 tgcgatttgaag 482
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 534 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 580
>gb|BE359207.1|BE359207 DG1_39_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 393
Score = 549 bits (277), Expect = e-154
Identities = 316/329 (96%)
Strand = Plus / Plus
Query: 298 cgagaaggacgccagcgcgtccgtgttctccaagatcaacaggttcgaggaggagctgcg 357
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 1 cgagaaggacgccagcgcgtccgtcttctccaagatcaacaggttcgaggaggcgctaag 60
Query: 358 cgaggcgctgcccagggagatggaggccgcccgcgtggccttcgagaccggcgccgcgcc 417
|||||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 61 ggaggcgctgcccagggagatggaggccgcccgcgtggcgttcgagacgggcacggcgcc 120
Query: 418 gatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatccgccagga 477
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcggcaacaggatcaaggacagccggtcgtacccgctgtaccgcttcatccgccagga 180
Query: 478 cctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgcaacaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgcaacaa 240
Query: 538 ggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgactgcctcaagga 597
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 ggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgagtgcctcaagga 300
Query: 598 gtgggacggcaagcccctgcccatctgct 626
|||||||||||||||||||||||||||||
Sbjct: 301 gtgggacggcaagcccctgcccatctgct 329
>gb|BG948233.1|BG948233 IP1_10_H11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 639
Score = 498 bits (251), Expect = e-139
Identities = 287/299 (95%)
Strand = Plus / Plus
Query: 328 caagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccgc 387
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 1 caagatcaacaggttcgaggaggcgctaagggaggcgctgcccagggagatggaggccgc 60
Query: 388 ccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccggtc 447
||||||||| |||||||| ||| | |||||||||| ||||||||||||||| ||||||||
Sbjct: 61 ccgcgtggcgttcgagacgggcacggcgccgatcggcaacaggatcaaggacagccggtc 120
Query: 448 gtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaa 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaa 180
Query: 508 gctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagct 567
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 gctcaagtcccccggcgaggagtgcaacaaggtgttcctggcgctcagcgagggcaagct 240
Query: 568 catcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatctgct 626
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcgaccccatgctcgagtgcctcaaggagtgggacggcaagcccctgcccatctgct 299
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 379 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 435
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 436 tgcgatttgaag 447
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 499 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 545
>gb|BE361256.1|BE361256 DG1_70_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 343
Score = 472 bits (238), Expect = e-131
Identities = 274/286 (95%)
Strand = Plus / Plus
Query: 341 ttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccgcccgcgtggccttc 400
|||||||||| ||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ttcgaggaggcgctaagggaggcgctgcccagggagatggaggccgcccgcgtggcgttc 60
Query: 401 gagaccggcgccgcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtac 460
||||| ||| | |||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gagacgggcacggcgccgatcggcaacaggatcaaggacagccggtcgtacccgctgtac 120
Query: 461 cgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtccccc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcttcatccgccaggacctcggcgccgtgtacctgaccggcgagaagctcaagtccccc 180
Query: 521 ggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatg 580
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 ggcgaggagtgcaacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatg 240
Query: 581 ctcgactgcctcaaggagtgggacggcaagcccctgcccatctgct 626
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcgagtgcctcaaggagtgggacggcaagcccctgcccatctgct 286
>gb|BG273178.1|BG273178 OV2_27_G08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 534
Score = 377 bits (190), Expect = e-102
Identities = 208/214 (97%)
Strand = Plus / Plus
Query: 413 gcgccgatcgccaacaggatcaaggagagccggtcgtacccgctgtaccgcttcatccgc 472
|||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5 gcgccgatcggcaacaggatcaagcacagccggtcgtacccgctgtaccgcttcatccgc 64
Query: 473 caggacctcggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgc 532
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 caggaccttggcgccgtgtacctgaccggcgagaagctcaagtcccccggcgaggagtgc 124
Query: 533 aacaaggtgttcctggccctcagcgagggcaagctcatcgaccccatgctcgactgcctc 592
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 125 aacaaggtgttcctggcgctcagcgagggcaagctcatcgaccccatgctcgagtgcctc 184
Query: 593 aaggagtgggacggcaagcccctgcccatctgct 626
||||||||||||||||||||||||||||||||||
Sbjct: 185 aaggagtgggacggcaagcccctgcccatctgct 218
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 298 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 354
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 355 tgcgatttgaag 366
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 418 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 464
>gb|BE359155.1|BE359155 DG1_39_C05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 391
Score = 371 bits (187), Expect = e-101
Identities = 238/255 (93%), Gaps = 2/255 (0%)
Strand = Plus / Plus
Query: 56 gccacctcgaggagaacctcaagagcgccg-caagagctgcgtgatggcgg-ggccagga 113
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 137 gccacctcgaggagaacctcaagagcgccgtcaagaactgcgtgatggcggcggccagga 196
Query: 114 aggtgctgaccaccagcctcggcggcgacctccacagcgcgcgcttcagcgagaaggccc 173
| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aagtgctcaccactagcctcgacggcgacctccacagcgcgcgcttcagcgagaaggccc 256
Query: 174 tgctcaccgccatcgaccgcgaggcggtgtacgggtactacgacgacccctgcagcgcca 233
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 257 tgctcaccgccatcgaccgcgaggccgtgtacgggtactacgacgacccctgcagcgcca 316
Query: 234 actcgcccctgatgaagaagatccgggccgtgctggtggaccacgnnnnnnnnagcggcg 293
||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 317 actcgcccctgatgaagaagatccgcgccgtgctggtggaccacgccctcgccagcggcg 376
Query: 294 aggccgagaaggacg 308
|||||||||||||||
Sbjct: 377 aggccgagaaggacg 391
>gb|CN131413.1|CN131413 RHOH1_48_A02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_48_A02_A002 3', mRNA sequence
Length = 760
Score = 250 bits (126), Expect = 2e-064
Identities = 261/306 (85%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || ||||||| |||||
Sbjct: 174 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccccgggag 233
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 234 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 293
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 294 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 353
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 354 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 413
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 414 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 473
Query: 617 cccatc 622
||||||
Sbjct: 474 cccatc 479
>gb|BG103102.1|BG103102 RHIZ2_18_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 571
Score = 244 bits (123), Expect = 1e-062
Identities = 258/303 (85%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 78 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 137
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 138 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 197
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| || ||| ||||| ||||||
Sbjct: 198 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctgggctgcgtgttcctgacg 257
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 258 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 317
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 318 ggcaagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagccgctgccc 377
Query: 620 atc 622
|||
Sbjct: 378 atc 380
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 6 ctgatgacgaagctgcgcgccgtgctggtggaccacg 42
>gb|CD221354.1|CD221354 CCC1_54_F07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_F07_A007 3', mRNA sequence
Length = 666
Score = 244 bits (123), Expect = 1e-062
Identities = 258/303 (85%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 74 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 133
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 134 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 193
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| || ||| ||||| ||||||
Sbjct: 194 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctgggctgcgtgttcctgacg 253
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 254 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 313
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 314 ggcaagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagccgctgccc 373
Query: 620 atc 622
|||
Sbjct: 374 atc 376
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 2 ctgatgacgaagctgcgcgccgtgctggtggaccacg 38
>gb|CD223110.1|CD223110 CCC1_26_F03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_F03_A007 3', mRNA sequence
Length = 662
Score = 244 bits (123), Expect = 1e-062
Identities = 258/303 (85%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 42 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 101
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 102 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 161
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| || ||| ||||| ||||||
Sbjct: 162 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctgggctgcgtgttcctgacg 221
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 222 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 281
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 282 ggcaagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagccgctgccc 341
Query: 620 atc 622
|||
Sbjct: 342 atc 344
>gb|CD224320.1|CD224320 CCC1_33_H03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_33_H03_A007 3', mRNA sequence
Length = 651
Score = 244 bits (123), Expect = 1e-062
Identities = 258/303 (85%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 39 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 98
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 99 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 158
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| || ||| ||||| ||||||
Sbjct: 159 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctgggctgcgtgttcctgacg 218
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 219 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 278
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 279 ggcaagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagccgctgccc 338
Query: 620 atc 622
|||
Sbjct: 339 atc 341
>gb|CD224791.1|CD224791 CCC1_36_B03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_B03_A007 3', mRNA sequence
Length = 663
Score = 244 bits (123), Expect = 1e-062
Identities = 258/303 (85%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 51 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 110
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 111 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 170
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| || ||| ||||| ||||||
Sbjct: 171 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctgggctgcgtgttcctgacg 230
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 231 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 290
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 291 ggcaagctcgtcgaccccatgctcgagtgcctcaaggagtgggacggcaagccgctgccc 350
Query: 620 atc 622
|||
Sbjct: 351 atc 353
>gb|CW297734.1|CW297734 104_780_11462198_148_35653_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462198, DNA
sequence
Length = 619
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 45 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 104
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 105 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 164
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 165 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 224
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 225 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 284
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 285 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 344
Query: 617 cccatc 622
||||||
Sbjct: 345 cccatc 350
>gb|CW436719.1|CW436719 fsbb001f153h11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f153h11, DNA
sequence
Length = 658
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Minus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 562 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 503
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 502 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 443
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 442 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 383
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 382 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 323
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 322 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 263
Query: 617 cccatc 622
||||||
Sbjct: 262 cccatc 257
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 631 ctgatgacgaagttgcgcgccgtgctggtggaccacg 595
>gb|BE355038.1|BE355038 DG1_10_B12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 626
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 128 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 187
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 188 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 247
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 248 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 307
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 308 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 367
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 368 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 427
Query: 617 cccatc 622
||||||
Sbjct: 428 cccatc 433
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 59 ctgatgacgaagctgcgcgccgtgctggtggaccacg 95
>gb|BE355327.1|BE355327 DG1_114_H09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 63 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 122
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 123 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 182
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 183 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 242
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 243 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 302
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 303 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 362
Query: 617 cccatc 622
||||||
Sbjct: 363 cccatc 368
>gb|BE355405.1|BE355405 DG1_114_H09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 63 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 122
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 123 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 182
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 183 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 242
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 243 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 302
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 303 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 362
Query: 617 cccatc 622
||||||
Sbjct: 363 cccatc 368
>gb|BE355461.1|BE355461 DG1_114_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 652
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 113 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 172
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 173 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 232
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 233 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 292
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 293 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 352
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 353 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 412
Query: 617 cccatc 622
||||||
Sbjct: 413 cccatc 418
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 44 ctgatgacgaagctgcgcgccgtgctggtggaccacg 80
>gb|BE358732.1|BE358732 DG1_31_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 619
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 133 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 192
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 193 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 252
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 253 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 312
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 313 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 372
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 373 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 432
Query: 617 cccatc 622
||||||
Sbjct: 433 cccatc 438
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 64 ctgatgacgaagctgcgcgccgtgctggtggaccacg 100
>gb|BE361202.1|BE361202 DG1_70_F03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 398
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 86 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 145
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 146 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 205
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 206 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 265
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 266 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 325
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 326 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 385
Query: 617 cccatc 622
||||||
Sbjct: 386 cccatc 391
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 17 ctgatgacgaagctgcgcgccgtgctggtggaccacg 53
>gb|BE367050.1|BE367050 PI1_42_D08.g2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 445
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 14 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 73
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 74 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 133
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 134 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 193
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 194 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 253
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 254 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 313
Query: 617 cccatc 622
||||||
Sbjct: 314 cccatc 319
>gb|BE592930.1|BE592930 WS1_92_B10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 577
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Minus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 530 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 471
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 470 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 411
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 410 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 351
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 350 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 291
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 290 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 231
Query: 617 cccatc 622
||||||
Sbjct: 230 cccatc 225
>gb|BG239851.1|BG239851 OV1_29_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 75 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 134
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 135 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 194
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 195 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 254
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 255 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 314
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 315 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 374
Query: 617 cccatc 622
||||||
Sbjct: 375 cccatc 380
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 6 ctgatgacgaagctgcgcgccgtgctggtggaccacg 42
>gb|BG356951.1|BG356951 OV2_12_A10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 468
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 49 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 108
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 109 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 168
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 169 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 228
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 229 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 288
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 289 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 348
Query: 617 cccatc 622
||||||
Sbjct: 349 cccatc 354
>gb|BG932930.1|BG932930 DG1_69_B03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 689
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 121 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 180
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 181 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 240
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 241 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 300
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 301 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 360
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 361 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 420
Query: 617 cccatc 622
||||||
Sbjct: 421 cccatc 426
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 52 ctgatgacgaagctgcgcgccgtgctggtggaccacg 88
>gb|CF072290.1|CF072290 FE1_7_F11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_7_F11_A002 3', mRNA sequence
Length = 740
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 98 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 157
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 158 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 217
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 218 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 277
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 278 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 337
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 338 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 397
Query: 617 cccatc 622
||||||
Sbjct: 398 cccatc 403
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 29 ctgatgacgaagctgcgcgccgtgctggtggaccacg 65
>gb|CN125016.1|CN125016 RHOH1_8_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_H01_A002 3', mRNA sequence
Length = 735
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 103 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 162
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 163 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 222
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 223 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 282
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 283 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 342
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 343 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 402
Query: 617 cccatc 622
||||||
Sbjct: 403 cccatc 408
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 34 ctgatgacgaagctgcgcgccgtgctggtggaccacg 70
>gb|CN126243.1|CN126243 RHOH1_16_B03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_B03_A002 3', mRNA sequence
Length = 753
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 165 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 224
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 225 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 284
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 285 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 344
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 345 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 404
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 405 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 464
Query: 617 cccatc 622
||||||
Sbjct: 465 cccatc 470
Score = 61.9 bits (31), Expect = 9e-008
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 148 cagcgcgcgcttcagcgagaaggccctgctcaccgccatcgaccgcgaggcggtgtacgg 207
||||||||| ||||||||||||| || ||||||||||||||||||||| |||| |
Sbjct: 2 cagcgcgcgattcagcgagaaggagctcatcaccgccatcgaccgcgagggcgtgttcac 61
Query: 208 gtactacgacgacccctgcagcgccaactcgcccctgatgaagaagatccgggccgtgct 267
|||| || ||||| |||||||| | ||| ||||||| |||| | || ||||||||
Sbjct: 62 gtacgcggaggacccggccagcgccagcctgccgctgatgacgaagctgcgcgccgtgct 121
Query: 268 ggtggaccacg 278
|||||||||||
Sbjct: 122 ggtggaccacg 132
>gb|CN129246.1|CN129246 RHOH1_34_G08.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G08_A002 3', mRNA sequence
Length = 728
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 131 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 190
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 191 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 250
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 251 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 310
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 311 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 370
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 371 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 430
Query: 617 cccatc 622
||||||
Sbjct: 431 cccatc 436
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 62 ctgatgacgaagctgcgcgccgtgctggtggaccacg 98
>gb|CN129330.1|CN129330 RHOH1_34_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G08_A002 5', mRNA sequence
Length = 772
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 400 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 459
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 460 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 519
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 520 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 579
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 580 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 639
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 640 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 699
Query: 617 cccatc 622
||||||
Sbjct: 700 cccatc 705
Score = 67.9 bits (34), Expect = 2e-009
Identities = 115/142 (80%)
Strand = Plus / Plus
Query: 137 ggcgacctccacagcgcgcgcttcagcgagaaggccctgctcaccgccatcgaccgcgag 196
||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||
Sbjct: 226 ggcgacctctccagcgcgcgattcagcgagaaggagctcatcaccgccatcgaccgcgag 285
Query: 197 gcggtgtacgggtactacgacgacccctgcagcgccaactcgcccctgatgaagaagatc 256
| |||| | |||| || ||||| |||||||| | ||| ||||||| |||| |
Sbjct: 286 ggcgtgttcacgtacgcggaggacccggccagcgccagcctgccgctgatgacgaagctg 345
Query: 257 cgggccgtgctggtggaccacg 278
|| |||||||||||||||||||
Sbjct: 346 cgcgccgtgctggtggaccacg 367
Score = 40.1 bits (20), Expect = 0.35
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 gccacctcgaggagaacctcaaga 79
||||||||||||||||| ||||||
Sbjct: 143 gccacctcgaggagaacatcaaga 166
>gb|CN138952.1|CN138952 OX1_15_D09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_15_D09_A002 3', mRNA sequence
Length = 750
Score = 242 bits (122), Expect = 5e-062
Identities = 260/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 159 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 218
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 219 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 278
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 279 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 338
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 339 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 398
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 399 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 458
Query: 617 cccatc 622
||||||
Sbjct: 459 cccatc 464
Score = 52.0 bits (26), Expect = 9e-005
Identities = 101/126 (80%)
Strand = Plus / Plus
Query: 153 cgcgcttcagcgagaaggccctgctcaccgccatcgaccgcgaggcggtgtacgggtact 212
|||| ||||||||||||| || ||||||||||||||||||||| |||| | ||||
Sbjct: 1 cgcgattcagcgagaaggagctcatcaccgccatcgaccgcgagggcgtgttcacgtacg 60
Query: 213 acgacgacccctgcagcgccaactcgcccctgatgaagaagatccgggccgtgctggtgg 272
|| ||||| |||||||| | ||| ||||||| |||| | || |||||||||||||
Sbjct: 61 cggaggacccggccagcgccagcctgccgctgatgacgaagctgcgcgccgtgctggtgg 120
Query: 273 accacg 278
||||||
Sbjct: 121 accacg 126
>gb|BM318326.1|BM318326 PI1_77_C08.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 582
Score = 236 bits (119), Expect = 3e-060
Identities = 257/303 (84%)
Strand = Plus / Plus
Query: 320 gtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatg 379
|||||||||||||||| || ||||||||||||||| |||| || |||||| ||||| ||
Sbjct: 1 gtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtg 60
Query: 380 gaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggag 439
|||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |||
Sbjct: 61 gaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggac 120
Query: 440 agccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgacc 499
|||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||||
Sbjct: 121 agccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacg 180
Query: 500 ggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgag 559
|||||||||||||||||||||||||||||||||| |||||||||| | | ||| | ||
Sbjct: 181 ggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccag 240
Query: 560 ggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgccc 619
||||||||| ||||||| ||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 241 ggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgccc 300
Query: 620 atc 622
|||
Sbjct: 301 atc 303
>gb|CX619982.1|CX619982 GABR1_49_D04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_49_D04_A002 3', mRNA sequence
Length = 468
Score = 236 bits (119), Expect = 3e-060
Identities = 128/131 (97%)
Strand = Plus / Plus
Query: 496 gaccggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcag 555
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gaccggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggcgctcag 60
Query: 556 cgagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccct 615
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 cgagggcaagctcatcgaccccatgctcgagtgcctcaaggagtgggacggcaagcccct 120
Query: 616 gcccatctgct 626
|||||| ||||
Sbjct: 121 gcccatttgct 131
Score = 54.0 bits (27), Expect = 2e-005
Identities = 62/72 (86%), Gaps = 5/72 (6%)
Strand = Plus / Plus
Query: 687 gcgaggaagaaataaagaagggagta--tttcggtattctcaagcaggcttcatatcgtt 744
||||| ||| |||||||||||||||| |||| ||||||||| ||||||||| |||||
Sbjct: 211 gcgagaaaggaataaagaagggagtatttttcagtattctca---aggcttcatttcgtt 267
Query: 745 tgcgatctgaag 756
|||||| |||||
Sbjct: 268 tgcgatttgaag 279
Score = 48.1 bits (24), Expect = 0.001
Identities = 43/47 (91%), Gaps = 3/47 (6%)
Strand = Plus / Plus
Query: 802 ttgtagcagtgatc-gtgtaaacgtgtattctgtct--gttgttctt 845
|||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 331 ttgtagcagtgatccgtgcaaacgtgtattctgtctctgttgttctt 377
>gb|BE359598.1|BE359598 DG1_54_H12.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 328
Score = 234 bits (118), Expect = 1e-059
Identities = 256/302 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 27 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 86
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 87 gtggaggccgcccgcgtcgccgtcgctgagggcaccgcccccgtggcgaaccggatcgcg 146
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 147 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 206
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 207 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 266
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 267 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 326
Query: 617 cc 618
||
Sbjct: 327 cc 328
>gb|CX608397.1|CX608397 ANR1_38_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_H10_A002 3', mRNA sequence
Length = 616
Score = 234 bits (118), Expect = 1e-059
Identities = 259/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||| ||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 26 tccgtgtcctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 85
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 86 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 145
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 146 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 205
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 206 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 265
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 266 cagggcaagctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctg 325
Query: 617 cccatc 622
||||||
Sbjct: 326 cccatc 331
>gb|CX622505.1|CX622505 GABR1_64_H04.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_H04_A002 3', mRNA sequence
Length = 608
Score = 226 bits (114), Expect = 3e-057
Identities = 258/306 (84%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 28 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 87
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 88 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 147
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 148 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 207
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 208 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 267
Query: 557 gagggcaagctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctg 616
|||||||||| ||||||| ||||| || | |||||||||||||||||||||||| |||
Sbjct: 268 cagggcaagcttgtcgaccctatgctagagtacctcaaggagtgggacggcaagccgctg 327
Query: 617 cccatc 622
||||||
Sbjct: 328 cccatc 333
>gb|AW745482.1|AW745482 WS1_35_G01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 521
Score = 224 bits (113), Expect = 1e-056
Identities = 251/297 (84%)
Strand = Plus / Minus
Query: 326 tccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggcc 385
|||||||||| || ||||||||||||||| |||| || |||||| ||||| ||||||||
Sbjct: 521 tccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtggaggcc 462
Query: 386 gcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccgg 445
|||||||| ||| ||| ||| |||| || | || ||| ||||| ||| ||||||
Sbjct: 461 gcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggacagccgg 402
Query: 446 tcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgag 505
|||| |||||||||||||||| ||||| |||| |||||| ||||| |||||| ||||||
Sbjct: 401 tcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacgggcgag 342
Query: 506 aagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaag 565
|||||||||||||||||||||||||||| |||||||||| | | ||| | ||||||||
Sbjct: 341 aagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccagggcaag 282
Query: 566 ctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatc 622
||| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 281 ctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgcccatc 225
>gb|BE360475.1|BE360475 DG1_63_E06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 372
Score = 224 bits (113), Expect = 1e-056
Identities = 251/297 (84%)
Strand = Plus / Plus
Query: 326 tccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggcc 385
|||||||||| || ||||||||||||||| |||| || |||||| ||||| ||||||||
Sbjct: 1 tccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtggaggcc 60
Query: 386 gcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccgg 445
|||||||| ||| ||| ||| |||| || | || ||| ||||| ||| ||||||
Sbjct: 61 gcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggacagccgg 120
Query: 446 tcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgag 505
|||| |||||||||||||||| ||||| |||| |||||| ||||| |||||| ||||||
Sbjct: 121 tcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacgggcgag 180
Query: 506 aagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaag 565
|||||||||||||||||||||||||||| |||||||||| | | ||| | ||||||||
Sbjct: 181 aagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccagggcaag 240
Query: 566 ctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatc 622
||| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 241 ctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgcccatc 297
>gb|BG932961.1|BG932961 DG1_69_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 224 bits (113), Expect = 1e-056
Identities = 251/297 (84%)
Strand = Plus / Plus
Query: 326 tccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggcc 385
|||||||||| || ||||||||||||||| |||| || |||||| ||||| ||||||||
Sbjct: 1 tccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtggaggcc 60
Query: 386 gcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccgg 445
|||||||| ||| ||| ||| |||| || | || ||| ||||| ||| ||||||
Sbjct: 61 gcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggacagccgg 120
Query: 446 tcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgag 505
|||| |||||||||||||||| ||||| |||| |||||| ||||| |||||| ||||||
Sbjct: 121 tcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacgggcgag 180
Query: 506 aagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaag 565
|||||||||||||||||||||||||||| |||||||||| | | ||| | ||||||||
Sbjct: 181 aagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccagggcaag 240
Query: 566 ctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatc 622
||| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 241 ctcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgcccatc 297
>gb|BE356652.1|BE356652 DG1_126_A06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 417
Score = 222 bits (112), Expect = 4e-056
Identities = 250/296 (84%)
Strand = Plus / Plus
Query: 327 ccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccg 386
||||||||| || ||||||||||||||| |||| || |||||| ||||| |||||||||
Sbjct: 1 ccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtggaggccg 60
Query: 387 cccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccggt 446
||||||| ||| ||| ||| |||| || | || ||| ||||| ||| |||||||
Sbjct: 61 cccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggacagccggt 120
Query: 447 cgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgaga 506
||| |||||||||||||||| ||||| |||| |||||| ||||| |||||| |||||||
Sbjct: 121 cgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacgggcgaga 180
Query: 507 agctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagc 566
||||||||||||||||||||||||||| |||||||||| | | ||| | |||||||||
Sbjct: 181 agctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccagggcaagc 240
Query: 567 tcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatc 622
|| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 241 tcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgcccatc 296
>gb|CD431991.1|CD431991 ETH1_12_C08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_C08_A002 3', mRNA sequence
Length = 580
Score = 222 bits (112), Expect = 4e-056
Identities = 250/296 (84%)
Strand = Plus / Plus
Query: 327 ccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggagatggaggccg 386
||||||||| || ||||||||||||||| |||| || |||||| ||||| |||||||||
Sbjct: 1 ccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggaggtggaggccg 60
Query: 387 cccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaaggagagccggt 446
||||||| ||| ||| ||| |||| || | || ||| ||||| ||| |||||||
Sbjct: 61 cccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcggacagccggt 120
Query: 447 cgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctgaccggcgaga 506
||| |||||||||||||||| ||||| |||| |||||| ||||| |||||| |||||||
Sbjct: 121 cgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctgacgggcgaga 180
Query: 507 agctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagcgagggcaagc 566
||||||||||||||||||||||||||| |||||||||| | | ||| | |||||||||
Sbjct: 181 agctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaaccagggcaagc 240
Query: 567 tcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccctgcccatc 622
|| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 241 tcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgctgcccatc 296
>gb|BG412632.1|BG412632 OV2_36_H06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 640
Score = 220 bits (111), Expect = 2e-055
Identities = 259/307 (84%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 317 tccgtgttctccaagatcaacaggttcgaggaggagctgcgcgaggcgctgcccagggag 376
||||||||||||||||||| || ||||||||||||||| |||| || |||||| |||||
Sbjct: 82 tccgtgttctccaagatcaccaagttcgaggaggagctccgcgcggtgctgccacgggag 141
Query: 377 atggaggccgcccgcgtggccttcgagaccggcgccgcgccgatcgccaacaggatcaag 436
|||||||||||||||| ||| ||| ||| |||| || | || ||| ||||| |
Sbjct: 142 gtggaggccgcccgcgtcgccgtcgccgagggcaccgcccccgtggcgaaccggatcgcg 201
Query: 437 gagagccggtcgtacccgctgtaccgcttcatccgccaggacctcggcgccgtgtacctg 496
|| |||||||||| |||||||||||||||| ||||| |||| |||||| ||||| ||||
Sbjct: 202 gacagccggtcgttcccgctgtaccgcttcgtccgcgaggagctcggctgcgtgttcctg 261
Query: 497 accggcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctggccctcagc 556
|| |||||||||||||||||||||||||||||||||| |||||||||| | | ||| |
Sbjct: 262 acgggcgagaagctcaagtcccccggcgaggagtgcaccaaggtgttcaacggcatcaac 321
Query: 557 gagggcaa-gctcatcgaccccatgctcgactgcctcaaggagtgggacggcaagcccct 615
||||||| | || ||||||| ||||| || |||||||||||||||||||||||||| ||
Sbjct: 322 cagggcaaggttcgtcgaccctatgctagagtgcctcaaggagtgggacggcaagccgct 381
Query: 616 gcccatc 622
|||||||
Sbjct: 382 gcccatc 388
Score = 42.1 bits (21), Expect = 0.088
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 242 ctgatgaagaagatccgggccgtgctggtggaccacg 278
||||||| |||| | || |||||||||||||||||||
Sbjct: 13 ctgatgacgaagctgcgcgccgtgctggtggaccacg 49
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 294,783
Number of Sequences: 832831
Number of extensions: 294783
Number of successful extensions: 86842
Number of sequences better than 0.5: 215
Number of HSP's better than 0.5 without gapping: 213
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 86267
Number of HSP's gapped (non-prelim): 435
length of query: 907
length of database: 491,359,669
effective HSP length: 20
effective length of query: 887
effective length of database: 474,703,049
effective search space: 421061604463
effective search space used: 421061604463
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)