BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405118.2.1
(1669 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX615327.1|CX615327 GABR1_19_B02.g1_A002 GA- or brassino... 1061 0.0
gb|CN137778.1|CN137778 OX1_59_B11.g1_A002 Oxidatively-stres... 1043 0.0
gb|CN149190.1|CN149190 WOUND1_61_F05.b1_A002 Wounded leaves... 1041 0.0
gb|BE358051.1|BE358051 DG1_24_F08.b1_A002 Dark Grown 1 (DG1... 912 0.0
gb|CD431402.1|CD431402 ETH1_8_D11.g1_A002 Ethylene-treated ... 912 0.0
gb|CN140627.1|CN140627 OX1_45_C11.g1_A002 Oxidatively-stres... 902 0.0
gb|CN140557.1|CN140557 OX1_45_C11.b1_A002 Oxidatively-stres... 890 0.0
gb|CX612747.1|CX612747 GABR1_4_F03.b1_A002 GA- or brassinol... 888 0.0
gb|CD430247.1|CD430247 ETH1_17_H05.g1_A002 Ethylene-treated... 874 0.0
gb|BG053707.1|BG053707 RHIZ2_8_G08.b1_A003 Rhizome2 (RHIZ2)... 872 0.0
gb|CX611730.1|CX611730 ANR1_26_H06.b1_A002 Anaerobic roots ... 858 0.0
gb|CX610663.1|CX610663 ANR1_20_C10.b1_A002 Anaerobic roots ... 842 0.0
gb|CN137709.1|CN137709 OX1_59_B11.b1_A002 Oxidatively-stres... 827 0.0
gb|CX612412.1|CX612412 GABR1_2_G03.b1_A002 GA- or brassinol... 827 0.0
gb|CD223179.1|CD223179 CCC1_26_D08.g1_A007 Callus culture/c... 825 0.0
gb|CF431166.1|CF431166 NIT1_6_H05.g1_A002 Nitrogen-deficien... 807 0.0
gb|BG560210.1|BG560210 RHIZ2_73_A04.b1_A003 Rhizome2 (RHIZ2... 801 0.0
gb|CX611816.1|CX611816 ANR1_26_H06.g1_A002 Anaerobic roots ... 799 0.0
gb|CN142753.1|CN142753 WOUND1_12_B02.b1_A002 Wounded leaves... 765 0.0
gb|CX620279.1|CX620279 GABR1_50_H04.g1_A002 GA- or brassino... 763 0.0
gb|CD230298.1|CD230298 SS1_42_G04.g1_A012 Salt-stressed see... 753 0.0
gb|CD430130.1|CD430130 ETH1_17_H05.b1_A002 Ethylene-treated... 720 0.0
gb|CD234642.1|CD234642 SS1_17_F09.b1_A012 Salt-stressed see... 716 0.0
gb|CX609322.1|CX609322 ANR1_12_A12.b1_A002 Anaerobic roots ... 716 0.0
gb|CX612403.1|CX612403 GABR1_2_F05.b1_A002 GA- or brassinol... 716 0.0
gb|CW460719.1|CW460719 fsbb001f208a16k0 Sorghum methylation... 668 0.0
gb|CX612495.1|CX612495 GABR1_2_F05.g1_A002 GA- or brassinol... 666 0.0
gb|BG560295.1|BG560295 RHIZ2_72_E05.b1_A003 Rhizome2 (RHIZ2... 662 0.0
gb|BG357604.1|BG357604 OV2_32_A04.g1_A002 Ovary 2 (OV2) Sor... 654 0.0
gb|CD234738.1|CD234738 SS1_17_F09.g1_A012 Salt-stressed see... 646 0.0
gb|CX608992.1|CX608992 ANR1_10_A12.b1_A002 Anaerobic roots ... 634 e-180
gb|BG739571.1|BG739571 EM1_82_E05.b1_A002 Embryo 1 (EM1) So... 622 e-176
gb|BG739403.1|BG739403 EM1_82_E05.g1_A002 Embryo 1 (EM1) So... 605 e-171
gb|BE358141.1|BE358141 DG1_24_F08.g1_A002 Dark Grown 1 (DG1... 597 e-168
gb|BE357317.1|BE357317 DG1_148_G05.g1_A002 Dark Grown 1 (DG... 591 e-167
gb|CX612505.1|CX612505 GABR1_2_G03.g1_A002 GA- or brassinol... 589 e-166
gb|BG102446.1|BG102446 RHIZ2_33_A08.g1_A003 Rhizome2 (RHIZ2... 571 e-161
gb|AW564057.1|AW564057 LG1_281_C06.b1_A002 Light Grown 1 (L... 555 e-156
gb|BG102757.1|BG102757 RHIZ2_33_A08.b1_A003 Rhizome2 (RHIZ2... 555 e-156
gb|CX620190.1|CX620190 GABR1_50_H04.b1_A002 GA- or brassino... 535 e-150
gb|CX619153.1|CX619153 GABR1_43_G04.g1_A002 GA- or brassino... 527 e-147
gb|BG357925.1|BG357925 OV2_32_A04.b1_A002 Ovary 2 (OV2) Sor... 513 e-143
gb|CD234703.1|CD234703 SS1_17_E08.g1_A012 Salt-stressed see... 511 e-143
gb|BF705089.1|BF705089 RHIZ2_1_C08.b1_A003 Rhizome2 (RHIZ2)... 500 e-139
gb|CN134169.1|CN134169 OX1_20_E03.g1_A002 Oxidatively-stres... 498 e-139
gb|CD230229.1|CD230229 SS1_42_G04.b1_A012 Salt-stressed see... 488 e-136
gb|CD234679.1|CD234679 SS1_17_E08.b1_A012 Salt-stressed see... 480 e-133
gb|BF705012.1|BF705012 RHIZ2_1_C08.g1_A003 Rhizome2 (RHIZ2)... 478 e-133
gb|CN134090.1|CN134090 OX1_20_E03.b1_A002 Oxidatively-stres... 474 e-131
gb|BG559736.1|BG559736 RHIZ2_73_A04.g1_A003 Rhizome2 (RHIZ2... 460 e-127
gb|BE352999.1|BE352999 DG1_2_B06.g1_A002 Dark Grown 1 (DG1)... 454 e-125
gb|AW676924.1|AW676924 DG1_2_B06.b1_A002 Dark Grown 1 (DG1)... 444 e-122
gb|CX610747.1|CX610747 ANR1_20_C10.g1_A002 Anaerobic roots ... 442 e-122
gb|CN142820.1|CN142820 WOUND1_12_B02.g1_A002 Wounded leaves... 440 e-121
gb|CD431354.1|CD431354 ETH1_8_D11.b1_A002 Ethylene-treated ... 418 e-115
gb|CN149275.1|CN149275 WOUND1_61_F05.g1_A002 Wounded leaves... 416 e-114
gb|CX612836.1|CX612836 GABR1_4_F03.g1_A002 GA- or brassinol... 410 e-112
gb|CD464100.1|CD464100 ETH1_48_B11.g1_A002 Ethylene-treated... 402 e-110
gb|CL181314.1|CL181314 104_392_10896662_116_31926_038 Sorgh... 379 e-103
gb|CX619063.1|CX619063 GABR1_43_G04.b1_A002 GA- or brassino... 363 3e-098
gb|CX615244.1|CX615244 GABR1_19_B02.b1_A002 GA- or brassino... 343 3e-092
gb|CW113780.1|CW113780 104_488_11105636_116_34558_076 Sorgh... 325 8e-087
gb|CD223151.1|CD223151 CCC1_26_D08.b1_A007 Callus culture/c... 315 7e-084
gb|CW460718.1|CW460718 fsbb001f208a16f0 Sorghum methylation... 276 6e-072
gb|CW275090.1|CW275090 104_748_11404776_148_35383_092 Sorgh... 246 6e-063
gb|CL181315.1|CL181315 104_392_10896662_148_31925_038 Sorgh... 210 3e-052
gb|CW113781.1|CW113781 104_488_11105636_148_34562_076 Sorgh... 210 3e-052
gb|CW275089.1|CW275089 104_748_11404776_116_35379_092 Sorgh... 210 3e-052
gb|CW346183.1|CW346183 104_849_11488888_116_36220_056 Sorgh... 210 3e-052
gb|CW346184.1|CW346184 104_849_11488888_148_36219_056 Sorgh... 210 3e-052
gb|CL196689.1|CL196689 104_423_10943221_116_32331_063 Sorgh... 167 4e-039
gb|CW186576.1|CW186576 104_604_11166641_148_36706_069 Sorgh... 167 4e-039
gb|CW311840.1|CW311840 104_801_11470440_148_36279_088 Sorgh... 167 4e-039
gb|CW323914.1|CW323914 104_818_11476882_148_35909_043 Sorgh... 167 4e-039
gb|BG558821.1|BG558821 RHIZ2_57_B01.b1_A003 Rhizome2 (RHIZ2... 159 1e-036
gb|CX609401.1|CX609401 ANR1_12_A12.g1_A002 Anaerobic roots ... 151 2e-034
gb|CW369330.1|CW369330 fsbb001f043l04f0 Sorghum methylation... 76 1e-011
gb|CW369331.1|CW369331 fsbb001f043l04k0 Sorghum methylation... 76 1e-011
gb|BF587706.1|BF587706 FM1_39_F09.g1_A003 Floral-Induced Me... 68 3e-009
gb|BG241324.1|BG241324 RHIZ2_49_A04.g1_A003 Rhizome2 (RHIZ2... 68 3e-009
gb|BG465898.1|BG465898 RHIZ2_46_A02.g1_A003 Rhizome2 (RHIZ2... 68 3e-009
gb|BG466123.1|BG466123 RHIZ2_48_H07.g1_A003 Rhizome2 (RHIZ2... 68 3e-009
gb|BG559679.1|BG559679 RHIZ2_72_E05.g1_A003 Rhizome2 (RHIZ2... 64 4e-008
gb|CD229956.1|CD229956 SS1_40_H11.b1_A012 Salt-stressed see... 62 2e-007
gb|CW406042.1|CW406042 fsbb001f098n24k0 Sorghum methylation... 60 7e-007
gb|BG159378.1|BG159378 OV2_7_A11.g1_A002 Ovary 2 (OV2) Sorg... 60 7e-007
gb|BG559907.1|BG559907 RHIZ2_75_B06.g1_A003 Rhizome2 (RHIZ2... 60 7e-007
gb|BI075108.1|BI075108 IP1_19_G01.g1_A002 Immature pannicle... 60 7e-007
gb|BG355941.2|BG355941 EM1_18_E06.g1_A002 Embryo 1 (EM1) So... 60 7e-007
gb|CN143114.1|CN143114 WOUND1_14_E12.b1_A002 Wounded leaves... 60 7e-007
gb|CX614740.1|CX614740 GABR1_16_B02.b1_A002 GA- or brassino... 60 7e-007
gb|CX622436.1|CX622436 GABR1_64_A04.b2_A002 GA- or brassino... 60 7e-007
gb|CX622493.1|CX622493 GABR1_64_G03.b2_A002 GA- or brassino... 60 7e-007
gb|CW093243.1|CW093243 104_456_10999657_148_37470_011 Sorgh... 56 1e-005
gb|CW250953.1|CW250953 104_713_11223665_116_35062_073 Sorgh... 56 1e-005
gb|CW469461.1|CW469461 fsbb001f222d05f0 Sorghum methylation... 56 1e-005
gb|CW479153.1|CW479153 fsbb001f237h02k0 Sorghum methylation... 56 1e-005
gb|CD462607.1|CD462607 ETH1_38_C08.g1_A002 Ethylene-treated... 56 1e-005
gb|CF430017.1|CF430017 PH1_25_A07.g1_A002 Phosphorous-defic... 56 1e-005
gb|CF431044.1|CF431044 NIT1_4_D08.g1_A002 Nitrogen-deficien... 56 1e-005
gb|CF431075.1|CF431075 NIT1_4_F06.g1_A002 Nitrogen-deficien... 56 1e-005
gb|CF432850.1|CF432850 NIT1_19_E10.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CN134469.1|CN134469 OX1_26_C04.g1_A002 Oxidatively-stres... 56 1e-005
gb|CX608431.1|CX608431 ANR1_38_C09.g1_A002 Anaerobic roots ... 56 1e-005
gb|CD224850.1|CD224850 CCC1_36_A05.g1_A007 Callus culture/c... 54 4e-005
gb|CN134387.1|CN134387 OX1_26_C04.b1_A002 Oxidatively-stres... 54 4e-005
gb|CW111669.1|CW111669 104_485_11104448_148_34536_030 Sorgh... 52 2e-004
gb|CW250954.1|CW250954 104_713_11223665_148_35058_073 Sorgh... 52 2e-004
gb|CW409779.1|CW409779 fsbb001f104d18f0 Sorghum methylation... 52 2e-004
gb|CW469462.1|CW469462 fsbb001f222d05k0 Sorghum methylation... 52 2e-004
gb|CW479152.1|CW479152 fsbb001f237h02f0 Sorghum methylation... 52 2e-004
gb|AW672498.1|AW672498 LG1_360_G12.b1_A002 Light Grown 1 (L... 52 2e-004
gb|BF588266.1|BF588266 FM1_39_F09.b1_A003 Floral-Induced Me... 52 2e-004
gb|BG159629.1|BG159629 OV2_7_A11.b1_A002 Ovary 2 (OV2) Sorg... 52 2e-004
gb|BG241634.1|BG241634 RHIZ2_49_A04.b1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|BG465554.1|BG465554 RHIZ2_46_A02.b1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|BG465813.1|BG465813 RHIZ2_48_H07.b1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|BG560494.1|BG560494 RHIZ2_75_B06.b1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|BI075369.1|BI075369 IP1_19_G01.b1_A002 Immature pannicle... 52 2e-004
gb|BG355707.2|BG355707 EM1_18_E06.b1_A002 Embryo 1 (EM1) So... 52 2e-004
gb|BM324190.1|BM324190 PIC1_25_D10.b1_A002 Pathogen-infecte... 52 2e-004
gb|BM328692.1|BM328692 PIC1_25_D10.g1_A002 Pathogen-infecte... 52 2e-004
gb|CD230053.1|CD230053 SS1_40_H11.g1_A012 Salt-stressed see... 52 2e-004
gb|CD232208.1|CD232208 SS1_38_B01.g1_A012 Salt-stressed see... 52 2e-004
gb|CN137545.1|CN137545 OX1_58_B04.b1_A002 Oxidatively-stres... 52 2e-004
gb|CN148699.1|CN148699 WOUND1_58_F02.b1_A002 Wounded leaves... 52 2e-004
gb|CN148779.1|CN148779 WOUND1_58_F02.g1_A002 Wounded leaves... 52 2e-004
gb|CX614809.1|CX614809 GABR1_16_B02.g1_A002 GA- or brassino... 52 2e-004
gb|CX622516.1|CX622516 GABR1_64_A04.g2_A002 GA- or brassino... 52 2e-004
gb|CX622583.1|CX622583 GABR1_64_G03.g2_A002 GA- or brassino... 52 2e-004
gb|CW122627.1|CW122627 104_501_11110773_116_34677_085 Sorgh... 48 0.003
gb|CW291185.1|CW291185 104_770_11413416_148_35562_084 Sorgh... 48 0.003
gb|CW376553.1|CW376553 fsbb001f054h22f0 Sorghum methylation... 48 0.003
gb|CW376554.1|CW376554 fsbb001f054h22k0 Sorghum methylation... 48 0.003
gb|CW465934.1|CW465934 fsbb001f216o21k0 Sorghum methylation... 48 0.003
gb|CD428180.1|CD428180 ETH1_28_C02.b1_A002 Ethylene-treated... 48 0.003
gb|CD462540.1|CD462540 ETH1_38_C08.b1_A002 Ethylene-treated... 48 0.003
gb|CF427705.1|CF427705 PH1_10_G01.b1_A002 Phosphorous-defic... 48 0.003
gb|CF429876.1|CF429876 PH1_25_A07.b1_A002 Phosphorous-defic... 48 0.003
gb|CF430956.1|CF430956 NIT1_4_F06.b1_A002 Nitrogen-deficien... 48 0.003
gb|CF431001.1|CF431001 NIT1_4_D08.b1_A002 Nitrogen-deficien... 48 0.003
gb|CF431564.1|CF431564 NIT1_8_B02.b1_A002 Nitrogen-deficien... 48 0.003
gb|CF432804.1|CF432804 NIT1_19_E10.b1_A002 Nitrogen-deficie... 48 0.003
gb|CF479940.1|CF479940 POL1_62_F07.g1_A002 Pollen Sorghum b... 48 0.003
gb|CF480262.1|CF480262 POL1_64_E06.g1_A002 Pollen Sorghum b... 48 0.003
gb|CF481208.1|CF481208 POL1_70_D02.g1_A002 Pollen Sorghum b... 48 0.003
gb|CN143200.1|CN143200 WOUND1_14_E12.g1_A002 Wounded leaves... 48 0.003
gb|CX608350.1|CX608350 ANR1_38_C09.b1_A002 Anaerobic roots ... 48 0.003
gb|BZ333293.1|BZ333293 hx69a06.b1 WGS-SbicolorF (JM107 adap... 46 0.010
gb|CL161597.1|CL161597 104_353_10805828_116_31829_116 Sorgh... 46 0.010
gb|CW021131.1|CW021131 104_109_10409366_114_30490 Sorghum m... 46 0.010
gb|CW027075.1|CW027075 104_253_10498305_114_30534 Sorghum m... 46 0.010
gb|CW030616.1|CW030616 104_258_10500333_116_30404 Sorghum m... 46 0.010
gb|CW038409.1|CW038409 104_270_10504910_114_30385 Sorghum m... 46 0.010
gb|CW055489.1|CW055489 104_296_10517135_114_30174 Sorghum m... 46 0.010
gb|CW060202.1|CW060202 104_303_10519727_5_30087 Sorghum met... 46 0.010
gb|CW081920.1|CW081920 104_422_10942954_116_32321_041 Sorgh... 46 0.010
gb|CW087448.1|CW087448 104_432_10947640_114_32553_064 Sorgh... 46 0.010
gb|CW124442.1|CW124442 104_504_11111778_116_34706_075 Sorgh... 46 0.010
gb|CW225456.1|CW225456 104_663_11204363_116_37207_046 Sorgh... 46 0.010
gb|CW317673.1|CW317673 104_809_11473539_116_35859_006 Sorgh... 46 0.010
gb|CW356195.1|CW356195 fsbb001f021c13f0 Sorghum methylation... 46 0.010
gb|CW479570.1|CW479570 fsbb001f238c15f0 Sorghum methylation... 46 0.010
gb|BE357246.1|BE357246 DG1_148_G05.b1_A002 Dark Grown 1 (DG... 46 0.010
gb|BE598733.1|BE598733 PI1_81_A05.b1_A002 Pathogen induced ... 46 0.010
gb|BF481269.1|BF481269 FM1_17_G03.b1_A003 Floral-Induced Me... 46 0.010
gb|BF704859.1|BF704859 FM1_52_D08.b1_A003 Floral-Induced Me... 46 0.010
gb|BG103286.1|BG103286 RHIZ2_18_E08.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG558231.1|BG558231 RHIZ2_64_F11.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG559417.1|BG559417 RHIZ2_54_E09.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG560376.1|BG560376 RHIZ2_73_F08.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|CN131881.1|CN131881 OX1_2_G05.g1_A002 Oxidatively-stress... 46 0.010
gb|CN134840.1|CN134840 OX1_28_G06.g1_A002 Oxidatively-stres... 46 0.010
gb|CN138126.1|CN138126 OX1_61_H04.g1_A002 Oxidatively-stres... 46 0.010
gb|CL175397.1|CL175397 104_381_10892427_116_31765_027 Sorgh... 44 0.041
gb|CW200341.1|CW200341 104_625_11184014_148_36859_049 Sorgh... 44 0.041
gb|CW222418.1|CW222418 104_657_11202363_148_37175_002 Sorgh... 44 0.041
gb|CW284939.1|CW284939 104_762_11410066_148_35500_047 Sorgh... 44 0.041
gb|CW307750.1|CW307750 104_795_11468304_116_35729_082 Sorgh... 44 0.041
gb|CW307751.1|CW307751 104_795_11468304_148_35737_082 Sorgh... 44 0.041
gb|CW310289.1|CW310289 104_799_11469637_116_35745_057 Sorgh... 44 0.041
gb|CW310290.1|CW310290 104_799_11469637_148_35749_057 Sorgh... 44 0.041
gb|CW313402.1|CW313402 104_803_11471267_116_35786_038 Sorgh... 44 0.041
gb|CW364137.1|CW364137 fsbb001f036a20f0 Sorghum methylation... 44 0.041
gb|CW364138.1|CW364138 fsbb001f036a20k0 Sorghum methylation... 44 0.041
gb|CW391631.1|CW391631 fsbb001f077n22f0 Sorghum methylation... 44 0.041
gb|CW406041.1|CW406041 fsbb001f098n24f0 Sorghum methylation... 44 0.041
gb|CW449656.1|CW449656 fsbb001f183o13k0 Sorghum methylation... 44 0.041
gb|CW452796.1|CW452796 fsbb001f193i06f0 Sorghum methylation... 44 0.041
gb|CW455655.1|CW455655 fsbb001f200k02k0 Sorghum methylation... 44 0.041
gb|CW457069.1|CW457069 fsbb001f202l13f0 Sorghum methylation... 44 0.041
gb|AW677150.1|AW677150 DG1_5_C04.b1_A002 Dark Grown 1 (DG1)... 44 0.041
gb|BG052001.1|BG052001 RHIZ2_7_F11.g1_A003 Rhizome2 (RHIZ2)... 44 0.041
gb|BG159605.1|BG159605 OV2_6_G01.b1_A002 Ovary 2 (OV2) Sorg... 44 0.041
gb|BM317823.1|BM317823 OV1_16_A02.b9_A002 Ovary 1 (OV1) Sor... 44 0.041
gb|CD430429.1|CD430429 ETH1_18_F12.g1_A002 Ethylene-treated... 44 0.041
gb|CF426921.1|CF426921 PH1_2_F12.g1_A002 Phosphorous-defici... 44 0.041
gb|CF487897.1|CF487897 POL1_46_C06.g1_A002 Pollen Sorghum b... 44 0.041
gb|CF760285.1|CF760285 DSAF1_57_G12.b1_A011 Drought-stresse... 44 0.041
gb|CF761356.1|CF761356 DSAF1_74_B08.b1_A011 Drought-stresse... 44 0.041
gb|CN123828.1|CN123828 RHOH1_1_B07.b1_A002 Acid- and alkali... 44 0.041
gb|CN129862.1|CN129862 RHOH1_37_H06.g1_A002 Acid- and alkal... 44 0.041
gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves... 44 0.041
gb|CN145955.1|CN145955 WOUND1_36_A11.g1_A002 Wounded leaves... 44 0.041
gb|CN147591.1|CN147591 WOUND1_50_E09.g1_A002 Wounded leaves... 44 0.041
gb|CX610566.1|CX610566 ANR1_19_B05.g1_A002 Anaerobic roots ... 44 0.041
gb|BZ336856.1|BZ336856 hz39f06.g1 WGS-SbicolorF (JM107 adap... 42 0.16
gb|CL179244.1|CL179244 104_388_10895179_148_31909_091 Sorgh... 42 0.16
gb|CW020696.1|CW020696 104_109_10409116_114_30490 Sorghum m... 42 0.16
gb|CW021124.1|CW021124 104_109_10409360_114_30490 Sorghum m... 42 0.16
gb|CW037032.1|CW037032 104_268_10504103_114_30381 Sorghum m... 42 0.16
gb|CW037907.1|CW037907 104_269_10504613_114_30383 Sorghum m... 42 0.16
gb|CW041547.1|CW041547 104_275_10506609_114_30284 Sorghum m... 42 0.16
gb|CW051292.1|CW051292 104_291_10515165_114_30192 Sorghum m... 42 0.16
gb|CW058999.1|CW058999 104_301_10519060_114_30160 Sorghum m... 42 0.16
gb|CW086469.1|CW086469 104_430_10946997_116_32570_089 Sorgh... 42 0.16
gb|CW193582.1|CW193582 104_616_11179644_116_36780_040 Sorgh... 42 0.16
gb|CW193583.1|CW193583 104_616_11179644_148_36779_040 Sorgh... 42 0.16
gb|CW194673.1|CW194673 104_618_11180226_148_36798_079 Sorgh... 42 0.16
gb|CW225892.1|CW225892 104_663_11204599_116_37207_020 Sorgh... 42 0.16
gb|CW258025.1|CW258025 104_723_11227652_116_35159_068 Sorgh... 42 0.16
gb|CW380704.1|CW380704 fsbb001f061k11k0 Sorghum methylation... 42 0.16
gb|CW394587.1|CW394587 fsbb001f082e01k0 Sorghum methylation... 42 0.16
gb|CW397084.1|CW397084 fsbb001f085n04f0 Sorghum methylation... 42 0.16
gb|CW423353.1|CW423353 fsbb001f133c03k0 Sorghum methylation... 42 0.16
gb|CW443593.1|CW443593 fsbb001f163m11k0 Sorghum methylation... 42 0.16
gb|CW445609.1|CW445609 fsbb001f170n14k0 Sorghum methylation... 42 0.16
gb|CW468814.1|CW468814 fsbb001f221d14f0 Sorghum methylation... 42 0.16
gb|BE125082.1|BE125082 DG1_16_D09.b1_A002 Dark Grown 1 (DG1... 42 0.16
gb|BG157911.1|BG157911 EM1_6_D09.b1_A002 Embryo 1 (EM1) Sor... 42 0.16
gb|BG322378.1|BG322378 EM1_24_B03.b1_A002 Embryo 1 (EM1) So... 42 0.16
gb|BM322531.1|BM322531 PIC1_6_A03.b1_A002 Pathogen-infected... 42 0.16
gb|BM325245.1|BM325245 PIC1_42_F09.b1_A002 Pathogen-infecte... 42 0.16
gb|CB926046.1|CB926046 ABA1_31_H02.b1_A012 Abscisic acid-tr... 42 0.16
gb|CB928753.1|CB928753 ABA1_24_G08.b1_A012 Abscisic acid-tr... 42 0.16
gb|CB928784.1|CB928784 ABA1_24_D08.b1_A012 Abscisic acid-tr... 42 0.16
gb|CB929284.1|CB929284 ABA1_41_F08.b1_A012 Abscisic acid-tr... 42 0.16
gb|CD206397.1|CD206397 HS1_22_E02.g1_A012 Heat-shocked seed... 42 0.16
gb|CD213183.1|CD213183 HS1_29_D08.b1_A012 Heat-shocked seed... 42 0.16
gb|CF427622.1|CF427622 PH1_16_C06.g1_A002 Phosphorous-defic... 42 0.16
gb|CN148743.1|CN148743 WOUND1_58_B09.g1_A002 Wounded leaves... 42 0.16
gb|CX618475.1|CX618475 GABR1_39_G09.g1_A002 GA- or brassino... 42 0.16
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 42 0.16
>gb|CX615327.1|CX615327 GABR1_19_B02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_B02_A002 5', mRNA sequence
Length = 824
Score = 1061 bits (535), Expect = 0.0
Identities = 625/655 (95%)
Strand = Plus / Minus
Query: 890 gcgcgcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctacc 949
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 824 gcgcgcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccacc 765
Query: 950 ttcacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtc 1009
|||||||||||||||| ||||||||| ||||||| |||||| || ||||||||||||| |
Sbjct: 764 ttcacgcccatgtggcgcacgccgcccaggcccacgatgccaccgcggaggcccggggcc 705
Query: 1010 gtcagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgcc 1069
|||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 704 gtcagcccaaaggcctttagcgggctgtacaccgttacgcccgcgcacagcagcggcgcc 645
Query: 1070 gcttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatg 1129
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gcttgctccggcgccagacccgccgggatcttcaccacaaacttctggtcgacgaccatg 585
Query: 1130 gtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccag 1189
||||||||||| || |||||||||||||| || ||||||||||| |||||||| ||||||
Sbjct: 584 gtggaggcgaagccgccctgcgtgggccggccgtcagtgtagacatcgttgtaggaccag 525
Query: 1190 atcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcac 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcac 465
Query: 1250 ccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccg 1309
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 464 ccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccg 405
Query: 1310 acctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccg 1369
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 404 acctccaccacctcaccgaccacctcgtgcccagggaccatagggtactttgaagccccg 345
Query: 1370 aggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcacc 1429
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 344 aggtggttcttggcctggtggatgtccgtgtggcagattccacagtagagcaccttcacc 285
Query: 1430 accacatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtg 1489
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 284 accacatcttcagggcctgtgttcctgagggtgtgggtgtagggggagaggtgtccggtg 225
Query: 1490 gcgtccctggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 224 gcgtccctggcggcccagccgaccaccttcctctcggacgccaggctccccattc 170
>gb|CN137778.1|CN137778 OX1_59_B11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_B11_A002 5', mRNA sequence
Length = 784
Score = 1043 bits (526), Expect = 0.0
Identities = 610/638 (95%)
Strand = Plus / Minus
Query: 907 cgagctgatcaccgtcacgtggtggcccatggccttggctaccttcacgcccatgtggcc 966
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 784 cgagctgatcaccgtcacgtggtggcccatggccttcgccaccttcacgcccatgtggcc 725
Query: 967 cacgccgccgaggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgctt 1026
||||||||| ||||||| |||||| || ||||||||||||| ||||||||||||| |||
Sbjct: 724 cacgccgcccaggcccacgatgccaccgcggaggcccggggccgtcagcccaaaggcctt 665
Query: 1027 cagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccag 1086
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 664 tagcgggctgtacaccgttacgcccgcgcacagcagcggcgccgcttgctccggcgccag 605
Query: 1087 acccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccacc 1146
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 604 acccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaagccgcc 545
Query: 1147 ctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagta 1206
|||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 544 ctgcgtgggccggccgtcagtgtagacatcgttgtaggaccagatcttcttgttgcagta 485
Query: 1207 ctgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgac 1266
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 484 ctgctcaacgttggccttgcaggggctgcactcgcggcagcacccgacgatcaccccgac 425
Query: 1267 gcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgcc 1326
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 424 gcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctccaccacctcacc 365
Query: 1327 gaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcctg 1386
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 364 gaccacctcgtgcccagggaccatagggtactttgaagccccgaggtggttcttggcctg 305
Query: 1387 gtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcc 1446
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 304 gtggatgtccgtgtggcagattccacagtagagcaccttcaccaccacatcttcagggcc 245
Query: 1447 tgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggccca 1506
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtccctggcggccca 185
Query: 1507 cccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||||||||||||||||||||||||||||||
Sbjct: 184 gccgaccaccttcctctcggacgccaggctccccattc 147
>gb|CN149190.1|CN149190 WOUND1_61_F05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_F05_A002 3', mRNA sequence
Length = 845
Score = 1041 bits (525), Expect = 0.0
Identities = 615/645 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 645 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 586
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 526
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 525 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 466
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 465 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 406
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 405 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 346
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 345 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 286
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 285 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 226
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 225 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 166
Query: 954 cgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtca 1013
|||||||||||||||||||||| ||||||| |||||| || ||||||||||||| |||||
Sbjct: 165 cgcccatgtggcccacgccgcccaggcccacgatgccaccgcggaggcccggggccgtca 106
Query: 1014 gcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgctt 1073
|||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 105 gcccaaaggcctttagcgggctgtacaccgttacgcccgcgcacagcagcggcgccgctt 46
Query: 1074 gctccggagccagacccgccgggatcttcaccacaaacttctggt 1118
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 45 gctccggcgccagacccgccgggatcttcaccacaaacttctggt 1
>gb|BE358051.1|BE358051 DG1_24_F08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 912 bits (460), Expect = 0.0
Identities = 547/576 (94%)
Strand = Plus / Minus
Query: 832 ggccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgc 891
|||||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 589 ggccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgc 530
Query: 892 gcgcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctacctt 951
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 529 gcgcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccacctt 470
Query: 952 cacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgt 1011
|||||||||||||||||||||||| ||||||| |||||| || ||||||||||||| |||
Sbjct: 469 cacgcccatgtggcccacgccgcccaggcccacgatgccaccgcggaggcccggggccgt 410
Query: 1012 cagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgc 1071
|||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 409 cagcccaaaggcctttagcgggctgtacaccgttacgcccgcgcacagcagcggcgccgc 350
Query: 1072 ttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggt 1131
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttgctccggcgccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggt 290
Query: 1132 ggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagat 1191
||||||||| || |||||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 289 ggaggcgaagccgccctgcgtgggccggccgtcagtgtagacatcgttgtaggaccagat 230
Query: 1192 cttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcaccc 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcaccc 170
Query: 1252 aacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgac 1311
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 169 gacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgac 110
Query: 1312 ctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgag 1371
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 109 ctccaccacctcaccgaccacctcgtgcccagggaccatagggtactttgaagccccgag 50
Query: 1372 gtggttcttggcctggtggatgtccgtgtggcagat 1407
||||||||||||||||||||||||||||||||||||
Sbjct: 49 gtggttcttggcctggtggatgtccgtgtggcagat 14
>gb|CD431402.1|CD431402 ETH1_8_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_D11_A002 5', mRNA sequence
Length = 737
Score = 912 bits (460), Expect = 0.0
Identities = 535/560 (95%)
Strand = Plus / Minus
Query: 985 gatgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcgggctgtacaccgt 1044
|||||| || ||||||||||||| ||||||||||||| ||| |||||||||||||||||
Sbjct: 736 gatgccaccgcggaggcccggggccgtcagcccaaaggcctttagcgggctgtacaccgt 677
Query: 1045 cacgccagcgcacagcagcggcgccgcttgctccggagccagacccgccgggatcttcac 1104
||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 676 tacgcccgcgtacagcagcggcgccgcttgctccggcgccagacccgccgggatcttcac 617
Query: 1105 cacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatc 1164
|||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct: 616 cacaaacttctggtcgacgaccatggtggaggcgaagccgccctgcgtgggccggccgtc 557
Query: 1165 agtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggcctt 1224
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agtgtagacatcgttgtaggaccagatcttcttgttgcagtactgctcaacgttggcctt 497
Query: 1225 gcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgac 1284
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 496 gcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccgac 437
Query: 1285 gccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagg 1344
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 436 gccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgcccagg 377
Query: 1345 gaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggca 1404
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaccatagggtactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggca 317
Query: 1405 gatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgta 1464
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gattccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgta 257
Query: 1465 ggagtagggggagaggtgtccggtggcgtccctggcggcccacccgaccaccttcctctc 1524
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 256 ggtgtagggggagaggtgtccggtggcgtccctggcggcccagccgaccaccttcctctc 197
Query: 1525 ggacgccaggctccccattc 1544
||||||||||||||||||||
Sbjct: 196 ggacgccaggctccccattc 177
>gb|CN140627.1|CN140627 OX1_45_C11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_C11_A002 5', mRNA sequence
Length = 709
Score = 902 bits (455), Expect = 0.0
Identities = 524/547 (95%)
Strand = Plus / Minus
Query: 998 aggcccggggtcgtcagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcac 1057
|||||||||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||
Sbjct: 709 aggcccggggccgtcagcccaaaggcctttagcgggctgtacaccgttacgcccgcgcac 650
Query: 1058 agcagcggcgccgcttgctccggagccagacccgccgggatcttcaccacaaacttctgg 1117
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 649 agcagcggcgccgcttgctccggcgccagacccgccgggatcttcaccacaaacttctgg 590
Query: 1118 tcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcg 1177
||||||||||||||||||||||| || |||||||||||||| || ||||||||||| |||
Sbjct: 589 tcgacgaccatggtggaggcgaagccgccctgcgtgggccggccgtcagtgtagacatcg 530
Query: 1178 ttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcac 1237
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttgtgggaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcac 470
Query: 1238 tcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggcc 1297
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 469 tcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctc 410
Query: 1298 acctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatac 1357
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 409 acctcgggcccgacctccaccacctcaccgaccacctcgtgcccagggaccatagggtac 350
Query: 1358 tttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtag 1417
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 349 tttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagattccacagtag 290
Query: 1418 agcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggag 1477
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 289 agcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggtgtagggggag 230
Query: 1478 aggtgtccggtggcgtccctggcggcccacccgaccaccttcctctcggacgccaggctc 1537
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 229 aggtgtccggtggcgtccctggcggcccagccgaccaccttcctctcggacgccaggctc 170
Query: 1538 cccattc 1544
|||||||
Sbjct: 169 cccattc 163
>gb|CN140557.1|CN140557 OX1_45_C11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_C11_A002 3', mRNA sequence
Length = 737
Score = 890 bits (449), Expect = 0.0
Identities = 545/577 (94%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 579 cctcgacgttgctgccggcgacgtcgacgaccaagcggtagcggacgtcgttgcgctcga 520
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 460
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 459 ccttgtcgacgcaaaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 400
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 399 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 340
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 339 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 280
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 220
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 219 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 160
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 159 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 100
Query: 954 cgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtca 1013
||||||||||| |||||||||| ||||||| |||||| || ||||||||||||| |||||
Sbjct: 99 cgcccatgtgggccacgccgcccaggcccacgatgccaccgcggaggcccggggccgtca 40
Query: 1014 gcccaaagtgcttcagcgggctgtacaccgtcacgcc 1050
|||||||| ||| |||||| |||||||||| |||||
Sbjct: 39 gcccaaaggcctttagcggggtgtacaccgttacgcc 3
>gb|CX612747.1|CX612747 GABR1_4_F03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_4_F03_A002 3', mRNA sequence
Length = 725
Score = 888 bits (448), Expect = 0.0
Identities = 520/544 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 544 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 485
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 425
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 424 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 365
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 364 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 305
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 304 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 245
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 244 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 185
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 184 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 125
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 124 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 65
Query: 954 cgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtca 1013
|||||||||||||||||||||| ||||||| |||||| || ||||||||||||| |||||
Sbjct: 64 cgcccatgtggcccacgccgcccaggcccacgatgccaccgcggaggcccggggccgtca 5
Query: 1014 gccc 1017
||||
Sbjct: 4 gccc 1
>gb|CD430247.1|CD430247 ETH1_17_H05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_H05_A002 5', mRNA sequence
Length = 696
Score = 874 bits (441), Expect = 0.0
Identities = 498/517 (96%)
Strand = Plus / Minus
Query: 1028 agcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccaga 1087
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 696 agcgggctgtacaccgttacgcccgcgcacagcagcggcgccgcttgctccggcgccaga 637
Query: 1088 cccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccc 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 636 cccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaagccgccc 577
Query: 1148 tgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtac 1207
||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 576 tgcgtgggccggccgtcagtgtagacatcgttgtaggaccagatcttcttgttgcagtac 517
Query: 1208 tgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacg 1267
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 516 tgctcaacgttggccttgcaggggctgcactcgcggcagcacccgacgatcaccccgacg 457
Query: 1268 cctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgccg 1327
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 456 cctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctccaccacctcaccg 397
Query: 1328 accacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcctgg 1387
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 accacctcgtgcccagggaccatagggtactttgaagccccgaggtggttcttggcctgg 337
Query: 1388 tggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcct 1447
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 336 tggatgtccgtgtggcagattccacagtagagcaccttcaccaccacatcttcagggcct 277
Query: 1448 gtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggcccac 1507
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 276 gtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcatccctggcggcccag 217
Query: 1508 ccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||||||||||||||||||||||||||||||
Sbjct: 216 ccgaccaccttcctctcggacgccaggctccccattc 180
>gb|BG053707.1|BG053707 RHIZ2_8_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 552
Score = 872 bits (440), Expect = 0.0
Identities = 518/544 (95%)
Strand = Plus / Minus
Query: 948 ccttcacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccgggg 1007
|||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 552 ccttcacgcccatgtggcccacgccgcccaggcccacgatgccgccgcggaggcccgggg 493
Query: 1008 tcgtcagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcg 1067
||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 492 ccgtcagcccaaaggcctttagcgggctgtacaccgttacgcccgcgcacagcagcggcg 433
Query: 1068 ccgcttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgacca 1127
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccgcttgctccggcgcaagacccgccgggatcttcaccacaaacttctggtcgacgacca 373
Query: 1128 tggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgacc 1187
||||||||||||| || |||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 372 tggtggaggcgaagccgccctgcgtgggccggccgtcagtgtagacatcgttgtaggacc 313
Query: 1188 agatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagc 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagc 253
Query: 1248 acccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcc 1307
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 252 acccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcc 193
Query: 1308 cgacctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccc 1367
|||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||
Sbjct: 192 cgacctccaccacctcaccgaccacctcgtgcccagggaccatggggtactttgaagccc 133
Query: 1368 cgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttca 1427
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 132 ctaggtggttcttggcctggtggatgtccgtgtggcagatcccacagtagagcaccttca 73
Query: 1428 ccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccgg 1487
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 72 ccaccacatcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccgg 13
Query: 1488 tggc 1491
||||
Sbjct: 12 tggc 9
>gb|CX611730.1|CX611730 ANR1_26_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H06_A002 3', mRNA sequence
Length = 765
Score = 858 bits (433), Expect = 0.0
Identities = 496/517 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 523 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 464
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 404
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 403 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 344
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 343 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 284
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 283 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 224
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 223 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 164
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 163 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 104
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 103 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 44
Query: 954 cgcccatgtggcccacgccgccgaggcccaggatgcc 990
|||||||||||||||||||||| ||||||| ||||||
Sbjct: 43 cgcccatgtggcccacgccgcccaggcccacgatgcc 7
Score = 44.1 bits (22), Expect = 0.041
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 tgacaccacaccacattctggcgtactccgagta 237
||||||||||||| || ||||||||||||||||
Sbjct: 765 tgacaccacaccatatcgtggcgtactccgagta 732
>gb|CX610663.1|CX610663 ANR1_20_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_C10_A002 3', mRNA sequence
Length = 771
Score = 842 bits (425), Expect = 0.0
Identities = 482/501 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 442
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 382
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 322
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 321 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 262
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 261 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 202
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 142
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 141 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 82
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 81 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 22
Query: 954 cgcccatgtggcccacgccgc 974
|||||||||||||||||||||
Sbjct: 21 cgcccatgtggcccacgccgc 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 767 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 710
>gb|CN137709.1|CN137709 OX1_59_B11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_B11_A002 3', mRNA sequence
Length = 776
Score = 827 bits (417), Expect = 0.0
Identities = 486/509 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 509 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 450
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 390
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 389 ccttgtccacgcaaaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 330
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 329 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 270
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 269 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 210
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 209 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 150
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||
Sbjct: 149 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgtgc 90
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 89 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 30
Query: 954 cgcccatgtggcccacgccgccgaggccc 982
|||||||||||||||||||||| ||||||
Sbjct: 29 cgcccatgtggcccacgccgcccaggccc 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 775 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 718
>gb|CX612412.1|CX612412 GABR1_2_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_G03_A002 3', mRNA sequence
Length = 767
Score = 827 bits (417), Expect = 0.0
Identities = 474/493 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 493 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 434
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 374
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 373 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 314
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 313 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 254
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 253 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 194
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 193 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 134
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 133 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 74
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttca 953
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 73 gcttcttggacgacgagctgatcaccgtcacgtggtggcccatggccttcgccaccttca 14
Query: 954 cgcccatgtggcc 966
|||||||||||||
Sbjct: 13 cgcccatgtggcc 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 759 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 702
>gb|CD223179.1|CD223179 CCC1_26_D08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_D08_A007 5', mRNA sequence
Length = 647
Score = 825 bits (416), Expect = 0.0
Identities = 464/480 (96%)
Strand = Plus / Minus
Query: 1065 gcgccgcttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacga 1124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gcgccgcttgctccggcgccagacccgccgggatcttcaccacaaacttctggtcgacga 588
Query: 1125 ccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatg 1184
|||||||||||||||| || |||||||||||||| || ||||||||||| |||||||| |
Sbjct: 587 ccatggtggaggcgaagccgccctgcgtgggccggccgtcagtgtagacatcgttgtagg 528
Query: 1185 accagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggc 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 accagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggc 468
Query: 1245 agcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgg 1304
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 467 agcacccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgg 408
Query: 1305 gcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaag 1364
||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 407 gcccgacctccaccacctcaccgaccacctcgtgcccagggaccatggggtactttgaag 348
Query: 1365 ccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcacct 1424
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 347 ccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccacagtagagcacct 288
Query: 1425 tcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtc 1484
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 287 tcaccaccacatcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtc 228
Query: 1485 cggtggcgtccctggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 227 cggtggcgtccctggcggcccagccgaccaccttcctctcggacgccaggctccccattc 168
>gb|CF431166.1|CF431166 NIT1_6_H05.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_6_H05_A002 5', mRNA sequence
Length = 565
Score = 807 bits (407), Expect = 0.0
Identities = 485/511 (94%)
Strand = Plus / Minus
Query: 980 cccaggatgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcgggctgtac 1039
|||| |||||| || ||||||||||||| ||||||||||||| ||| ||||||||||||
Sbjct: 565 cccacgatgccaccgcggaggcccggggccgtcagcccaaaggcctttagcgggctgtac 506
Query: 1040 accgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacccgccgggatc 1099
||||| ||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 505 accgttacgcccgcgcacagcagcggcgccgcttgctctggcgccagacccgccgggatc 446
Query: 1100 ttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgt 1159
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 445 ttcaccacaaacttctggtcgacgaccatggtggaggcgaagccgccctgcgtgggccgg 386
Query: 1160 ccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttg 1219
|| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccgtcagtgtagacatccttgtaggaccagatcttcttgttgcagtactgctcaacgttg 326
Query: 1220 gccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcg 1279
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 gccttgcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcg 266
Query: 1280 ccgacgccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgc 1339
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 ccgacgccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgc 206
Query: 1340 ccagggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtg 1399
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccagggaccatagggtactttgaagccccgaggtggttcttggcctggtggatgtccgtg 146
Query: 1400 tggcagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagg 1459
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tggcagattccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagg 86
Query: 1460 gtgtaggagtagggggagaggtgtccggtgg 1490
||||||| |||||||||||||||||||||||
Sbjct: 85 gtgtaggtgtagggggagaggtgtccggtgg 55
>gb|BG560210.1|BG560210 RHIZ2_73_A04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 527
Score = 801 bits (404), Expect = 0.0
Identities = 490/519 (94%)
Strand = Plus / Minus
Query: 794 tcgatgatgtagtccagcgagtcggcggccgcccccatggccgcggcgtccgagctcact 853
||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||
Sbjct: 527 tcgatgatgtagtccagcgagtcggcggccgccgccatggccgccgcgtccgtgctcacc 468
Query: 854 aggtacgcgtccgcgccgaggtggtccattgcctccgcgcgcttcttggacgacgagctg 913
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 467 aggtacgcgtccgcgcncaggtggtccatcgcctccgcgcgcttcttggacgacgagctg 408
Query: 914 atcaccgtcacgtggtggcccatggccttggctaccttcacgcccatgtggcccacgccg 973
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 407 atcaccgtcacgtggtggcccatggccttcgccaccttcacgcccatgtggcccacgccg 348
Query: 974 ccgaggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcggg 1033
|| ||||||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||
Sbjct: 347 cccaggcccacgatgccgccgcggaggcccggggccgtcagcccaaaggcctttagcggg 288
Query: 1034 ctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacccgcc 1093
||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 287 ctgtacaccgttacgcccgcgcacagcagcggcgccgcttgctccggcgcaagacccgcc 228
Query: 1094 gggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtg 1153
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 227 gggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaagccgccctgcgtg 168
Query: 1154 ggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctca 1213
||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 167 ggccggccgtcagtgtagacatcgttgtaggaccagatcttcttgttgcagtactgctca 108
Query: 1214 acgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctacc 1273
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 107 acgttggccttgcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctacc 48
Query: 1274 acgtcgccgacgccgtacttggccacctcgggcccgacc 1312
||||||||||||||||||||| ||||||||||||||||
Sbjct: 47 acgtcgccgacgccgtacttgctcacctcgggcccgacc 9
>gb|CX611816.1|CX611816 ANR1_26_H06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H06_A002 5', mRNA sequence
Length = 623
Score = 799 bits (403), Expect = 0.0
Identities = 448/463 (96%)
Strand = Plus / Minus
Query: 1082 gccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaat 1141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaag 564
Query: 1142 ccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttg 1201
|| |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 563 ccgccctgcgtgggccggccgtcagtgtagacatcgttgtaggaccagatcttcttgttg 504
Query: 1202 cagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcacc 1261
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 503 cagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccgacgatcacc 444
Query: 1262 ccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacc 1321
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 443 ccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctccaccacc 384
Query: 1322 tcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttg 1381
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 383 tcaccgaccacctcgtgcccagggaccatagggtactttgaagccccgaggtggttcttg 324
Query: 1382 gcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttca 1441
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 323 gcctggtggatgtccgtgtggcagattccacagtagagcaccttcaccaccacatcttca 264
Query: 1442 gggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcg 1501
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 263 gggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtccctggcg 204
Query: 1502 gcccacccgaccaccttcctctcggacgccaggctccccattc 1544
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcccagccgaccaccttcctctcggacgccaggctccccattc 161
>gb|CN142753.1|CN142753 WOUND1_12_B02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_12_B02_A002 3', mRNA sequence
Length = 623
Score = 765 bits (386), Expect = 0.0
Identities = 437/454 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 454 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 395
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 335
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 334 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 275
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 274 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 215
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 214 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 155
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 154 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 95
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 94 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 35
Query: 894 gcttcttggacgacgagctgatcaccgtcacgtg 927
||||||||||||||||||||||||||||||||||
Sbjct: 34 gcttcttggacgacgagctgatcaccgtcacgtg 1
>gb|CX620279.1|CX620279 GABR1_50_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_50_H04_A002 5', mRNA sequence
Length = 550
Score = 763 bits (385), Expect = 0.0
Identities = 454/477 (95%)
Strand = Plus / Minus
Query: 977 aggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcgggctg 1036
||||||| |||||| || ||||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 548 aggcccacgatgccaccgcggaggcccggggccgtcagcccaaaggcctttagcgggctg 489
Query: 1037 tacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacccgccggg 1096
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 488 tacaccgttacgcccgcgcacagcagcggcgccgcttgctccggcgccagacccgccggg 429
Query: 1097 atcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggc 1156
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 428 atcttcaccacaaacttctggtcgacgaccatggtggaggcgaagccgccctgcgtgggc 369
Query: 1157 cgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacg 1216
|| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 368 cggccgtcagtgtagacatcgttgtaggaccagatcttcttgttgcagtactgctcaacg 309
Query: 1217 ttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacg 1276
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 308 ttggccttgcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacg 249
Query: 1277 tcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcg 1336
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 tcgccgacgccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcg 189
Query: 1337 tgcccagggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtcc 1396
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgcccagggaccatagggtactttgaagccccgaggtggttcttggcctggtggatgtcc 129
Query: 1397 gtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttc 1453
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtgtggcagattccacagtagagcaccttcaccaccacatcttcagggcctgtgttc 72
>gb|CD230298.1|CD230298 SS1_42_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_42_G04_A012 5', mRNA sequence
Length = 612
Score = 753 bits (380), Expect = 0.0
Identities = 428/444 (96%)
Strand = Plus / Minus
Query: 1101 tcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtc 1160
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 612 tcaccacaaacttctggtcgacgaccatggtggaggcgaagccgccctgcgtgggccggc 553
Query: 1161 catcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttgg 1220
| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 552 cgtcagtgtagacatcgttgtaggaccagatcttcttgttgcagtactgctcaacgttgg 493
Query: 1221 ccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgc 1280
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 492 ccttgcacgggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgc 433
Query: 1281 cgacgccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcc 1340
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 432 cgacgccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgcc 373
Query: 1341 cagggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgt 1400
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagggaccatggggtactttgaagccccgaggtggttcttggcctggtggatgtccgtgt 313
Query: 1401 ggcagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgaggg 1460
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggcagatcccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgaggg 253
Query: 1461 tgtaggagtagggggagaggtgtccggtggcgtccctggcggcccacccgaccaccttcc 1520
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 tgtaggtgtagggggagaggtgtccggtggcgtccctggcggcccagccgaccaccttcc 193
Query: 1521 tctcggacgccaggctccccattc 1544
||||||||||||||||||||||||
Sbjct: 192 tctcggacgccaggctccccattc 169
>gb|CD430130.1|CD430130 ETH1_17_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_H05_A002 3', mRNA sequence
Length = 677
Score = 720 bits (363), Expect = 0.0
Identities = 414/431 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 431 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 372
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 312
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 252
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 251 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 192
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 191 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 132
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 131 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 72
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 71 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 12
Query: 894 gcttcttggac 904
|||||||||||
Sbjct: 11 gcttcttggac 1
Score = 46.1 bits (23), Expect = 0.010
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 203 ctgacaccacaccacattctggcgtactccgagta 237
|||||||||||||| || ||||||||||||||||
Sbjct: 674 ctgacaccacaccatatcgtggcgtactccgagta 640
>gb|CD234642.1|CD234642 SS1_17_F09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_17_F09_A012 3', mRNA sequence
Length = 683
Score = 716 bits (361), Expect = 0.0
Identities = 412/429 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 370
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 310
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 309 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 250
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 249 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 190
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 189 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 130
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 129 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 70
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 69 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 10
Query: 894 gcttcttgg 902
|||||||||
Sbjct: 9 gcttcttgg 1
Score = 60.0 bits (30), Expect = 7e-007
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 192 tgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 683 tgctggtgacactgacaccacaccatatcgtggcgtactccgagta 638
>gb|CX609322.1|CX609322 ANR1_12_A12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_A12_A002 3', mRNA sequence
Length = 725
Score = 716 bits (361), Expect = 0.0
Identities = 412/429 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 370
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 310
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 309 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 250
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 249 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 190
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 189 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 130
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 129 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 70
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 69 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 10
Query: 894 gcttcttgg 902
|||||||||
Sbjct: 9 gcttcttgg 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 695 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 638
>gb|CX612403.1|CX612403 GABR1_2_F05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_F05_A002 3', mRNA sequence
Length = 703
Score = 716 bits (361), Expect = 0.0
Identities = 412/429 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 370
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 310
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 309 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 250
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 249 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 190
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 189 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 130
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 129 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 70
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgc 893
|||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 69 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcccaggtggtccatcgcctccgcgc 10
Query: 894 gcttcttgg 902
|||||||||
Sbjct: 9 gcttcttgg 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 695 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 638
>gb|CW460719.1|CW460719 fsbb001f208a16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208a16, DNA
sequence
Length = 574
Score = 668 bits (337), Expect = 0.0
Identities = 382/397 (96%)
Strand = Plus / Plus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 176 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 235
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 295
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 355
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 356 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 415
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 416 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 475
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 476 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 535
Query: 834 ccgcggcgtccgagctcactaggtacgcgtccgcgcc 870
|||| ||||||| |||||| |||||||||||||||||
Sbjct: 536 ccgccgcgtccgtgctcaccaggtacgcgtccgcgcc 572
>gb|CX612495.1|CX612495 GABR1_2_F05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_F05_A002 5', mRNA sequence
Length = 560
Score = 666 bits (336), Expect = 0.0
Identities = 384/400 (96%)
Strand = Plus / Minus
Query: 1145 ccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcag 1204
|||||||||||||| || ||||| ||||| |||||||| |||||||||||| |||||||
Sbjct: 559 ccctgcgtgggccggccgtcagtctagacatcgttgtaggaccagatcttcccgttgcag 500
Query: 1205 tactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccg 1264
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 499 tactgctcaacgttggccttgcaggggctgcactcgcggcagcacccgacgatcaccccg 440
Query: 1265 acgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcg 1324
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 acgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctccaccacctca 380
Query: 1325 ccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcc 1384
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 ccgaccacctcgtgcccagggaccatagggtactttgaagccccgaggtggttcttggcc 320
Query: 1385 tggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcaggg 1444
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 319 tggtggatgtccgtgtggcagattccacagtagagcaccttcaccaccacatcttcaggg 260
Query: 1445 cctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggcc 1504
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 259 cctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtccctggcggcc 200
Query: 1505 cacccgaccaccttcctctcggacgccaggctccccattc 1544
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 199 cagccgaccaccttcctctcggacgccaggctccccattc 160
>gb|BG560295.1|BG560295 RHIZ2_72_E05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 540
Score = 662 bits (334), Expect = 0.0
Identities = 370/382 (96%)
Strand = Plus / Minus
Query: 1163 tcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggcc 1222
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcagtgtagacatcgttgtaggaccagatcttcttgttgcagtactgctcaacgttggcc 478
Query: 1223 ttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccg 1282
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 477 ttgcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccg 418
Query: 1283 acgccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgccca 1342
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 417 acgccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgccca 358
Query: 1343 gggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtgg 1402
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 357 gggaccatggggtactttgaagcccctaggtggttcttggcctggtggatgtccgtgtgg 298
Query: 1403 cagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtg 1462
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cagatcccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtg 238
Query: 1463 taggagtagggggagaggtgtccggtggcgtccctggcggcccacccgaccaccttcctc 1522
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 237 taggtgtagggggagaggtgtccggtggcgtccctggcggcccagccgaccaccttcctc 178
Query: 1523 tcggacgccaggctccccattc 1544
||||||||||||||||||||||
Sbjct: 177 tcggacgccaggctccccattc 156
>gb|BG357604.1|BG357604 OV2_32_A04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 654 bits (330), Expect = 0.0
Identities = 375/390 (96%)
Strand = Plus / Minus
Query: 478 gacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccg 537
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 390 gacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgagccg 331
Query: 538 ctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcccctt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcccctt 271
Query: 598 gtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgt 657
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 270 gtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctccccgt 211
Query: 658 gatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgac 717
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 210 gatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccgatgac 151
Query: 718 gcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtg 777
||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 150 gcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcgggtg 91
Query: 778 gtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatggccgc 837
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 90 gtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatggccgc 31
Query: 838 ggcgtccgagctcactaggtacgcgtccgc 867
||||||| |||||| ||||||||||||||
Sbjct: 30 cgcgtccgtgctcaccaggtacgcgtccgc 1
>gb|CD234738.1|CD234738 SS1_17_F09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_17_F09_A012 5', mRNA sequence
Length = 539
Score = 646 bits (326), Expect = 0.0
Identities = 359/370 (97%)
Strand = Plus / Minus
Query: 1175 tcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctg 1234
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 536 tcgttgtaggaccagatcttcttgttgcagtactgctcaacgttggccttgcacgggctg 477
Query: 1235 cactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttg 1294
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttg 417
Query: 1295 gccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccatagga 1354
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 416 ctcacctcgggcccgacctccaccacctcaccgaccacctcgtgcccagggaccatgggg 357
Query: 1355 tactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcag 1414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 356 tactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccacag 297
Query: 1415 tagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggg 1474
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 296 tagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggtgtagggg 237
Query: 1475 gagaggtgtccggtggcgtccctggcggcccacccgaccaccttcctctcggacgccagg 1534
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 236 gagaggtgtccggtggcgtccctggcggcccagccgaccaccttcctctcggacgccagg 177
Query: 1535 ctccccattc 1544
||||||||||
Sbjct: 176 ctccccattc 167
>gb|CX608992.1|CX608992 ANR1_10_A12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_A12_A002 3', mRNA sequence
Length = 662
Score = 634 bits (320), Expect = e-180
Identities = 359/372 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 373 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 314
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 254
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 253 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 194
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 193 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 134
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 133 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 74
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgccgccatgg 14
Query: 834 ccgcggcgtccg 845
|||| |||||||
Sbjct: 13 ccgccgcgtccg 2
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 639 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 582
>gb|BG739571.1|BG739571 EM1_82_E05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 512
Score = 622 bits (314), Expect = e-176
Identities = 341/350 (97%)
Strand = Plus / Minus
Query: 1195 cttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaac 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 512 cttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccgac 453
Query: 1255 gatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctc 1314
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 452 gatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctc 393
Query: 1315 caccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtg 1374
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 392 caccacctcaccgaccacctcgtgcccagggaccatagggtactttgaagccccgaggtg 333
Query: 1375 gttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccac 1434
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 332 gttcttggcctggtggatgtccgtgtggcagattccacagtagagcaccttcaccaccac 273
Query: 1435 atcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtc 1494
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 272 atcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtc 213
Query: 1495 cctggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 212 cctggcggcccagccgaccaccttcctctcggacgccaggctccccattc 163
>gb|BG739403.1|BG739403 EM1_82_E05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 605 bits (305), Expect = e-171
Identities = 338/349 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 349 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 290
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 230
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 229 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 170
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 169 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 110
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 109 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 50
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggc 822
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggc 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 615 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 558
>gb|BE358141.1|BE358141 DG1_24_F08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 528
Score = 597 bits (301), Expect = e-168
Identities = 334/345 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 345 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 286
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 226
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 225 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 166
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 165 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 106
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 105 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 46
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcgg 818
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcgg 1
>gb|BE357317.1|BE357317 DG1_148_G05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 456
Score = 591 bits (298), Expect = e-167
Identities = 331/342 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 342 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 283
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 223
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 222 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 163
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 162 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 103
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 102 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 43
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagt 815
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagt 1
>gb|CX612505.1|CX612505 GABR1_2_G03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_G03_A002 5', mRNA sequence
Length = 506
Score = 589 bits (297), Expect = e-166
Identities = 330/341 (96%)
Strand = Plus / Minus
Query: 1204 gtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcacccc 1263
|||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 503 gtactgctcaacgtcgcccttgcaggggctgcactcgcggcagcacccgacgatcacccc 444
Query: 1264 gacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctc 1323
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 gacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctccaccacctc 384
Query: 1324 gccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggc 1383
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 383 accgaccacctcgtgcccagggaccatagggtactttgaagccccgaggtggttcttggc 324
Query: 1384 ctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagg 1443
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 323 ctggtggatgtccgtgtggcagattccacagtagagcaccttcaccaccacatcttcagg 264
Query: 1444 gcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggc 1503
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtccctggcggc 204
Query: 1504 ccacccgaccaccttcctctcggacgccaggctccccattc 1544
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ccagccgaccaccttcctctcggacgccaggctccccattc 163
>gb|BG102446.1|BG102446 RHIZ2_33_A08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 448
Score = 571 bits (288), Expect = e-161
Identities = 330/344 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 344 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 285
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 225
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 224 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 165
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
|||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 164 ccgtgatggccttccggcccagcatcaccatcggggacacgaagctgaggggctcgccga 105
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
|||||||||||| |||| |||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 104 tgacgcccagcaacacgtgcttgccgtccagcctcagcagcgacaggtagggctctagcg 45
Query: 774 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcg 817
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 ggtggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcg 1
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 381 cccgaacgaacgttgcacgcg 401
|||||||||||||||||||||
Sbjct: 440 cccgaacgaacgttgcacgcg 420
>gb|AW564057.1|AW564057 LG1_281_C06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 467
Score = 555 bits (280), Expect = e-156
Identities = 307/316 (97%)
Strand = Plus / Minus
Query: 1229 gggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccg 1288
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 467 gggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccgacgccg 408
Query: 1289 tacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggacc 1348
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 407 tacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgcccagggacc 348
Query: 1349 ataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatc 1408
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atagggtactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatt 288
Query: 1409 ccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggag 1468
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 287 ccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggtg 228
Query: 1469 tagggggagaggtgtccggtggcgtccctggcggcccacccgaccaccttcctctcggac 1528
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 227 tagggggagaggtgtccggtggcgtccctggcggcccagccgaccaccttcctctcggac 168
Query: 1529 gccaggctccccattc 1544
||||||||||||||||
Sbjct: 167 gccaggctccccattc 152
>gb|BG102757.1|BG102757 RHIZ2_33_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 474
Score = 555 bits (280), Expect = e-156
Identities = 310/320 (96%)
Strand = Plus / Minus
Query: 1225 gcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgac 1284
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 474 gcaggggctgcactcgcggcagcacccgacgatcaccccgacgcctaccacgtcgccgac 415
Query: 1285 gccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagg 1344
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 414 gccgtacttgctcacctcgggcccgacctccaccacctcaccgaccacctcgtgcccagg 355
Query: 1345 gaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggca 1404
|||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 354 gaccatggggtactttgaagcccctaggtggttcttggcctggtggatgtccgtgtggca 295
Query: 1405 gatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgta 1464
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gatcccacagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgta 235
Query: 1465 ggagtagggggagaggtgtccggtggcgtccctggcggcccacccgaccaccttcctctc 1524
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 234 ggtgtagggggagaggtgtccggtggcgtccctggcggcccagccgaccaccttcctctc 175
Query: 1525 ggacgccaggctccccattc 1544
||||||||||||||||||||
Sbjct: 174 ggacgccaggctccccattc 155
>gb|CX620190.1|CX620190 GABR1_50_H04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_50_H04_A002 3', mRNA sequence
Length = 520
Score = 535 bits (270), Expect = e-150
Identities = 303/314 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 314 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 255
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 195
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 194 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 135
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 134 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 75
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcg 773
||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 74 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcgacaggtagggctccagcg 15
Query: 774 ggtggtgcacgggc 787
||||||||||||||
Sbjct: 14 ggtggtgcacgggc 1
>gb|CX619153.1|CX619153 GABR1_43_G04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_43_G04_A002 5', mRNA sequence
Length = 464
Score = 527 bits (266), Expect = e-147
Identities = 293/302 (97%)
Strand = Plus / Minus
Query: 1243 gcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctc 1302
||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 464 gcagcacccgacgatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctc 405
Query: 1303 gggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatactttga 1362
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 404 gggcccgacctccaccacctcaccgaccacctcgtgcccagggaccatagggtactttga 345
Query: 1363 agccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcac 1422
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 344 agccccgaggtggttcttggcctggtggatgtccgtgtggcagattccacagtagagcac 285
Query: 1423 cttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtg 1482
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 284 cttcaccaccacatcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtg 225
Query: 1483 tccggtggcgtccctggcggcccacccgaccaccttcctctcggacgccaggctccccat 1542
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 224 tccggtggcgtccctggcggcccagccgaccaccttcctctcggacgccaggctccccat 165
Query: 1543 tc 1544
||
Sbjct: 164 tc 163
>gb|BG357925.1|BG357925 OV2_32_A04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 367
Score = 513 bits (259), Expect = e-143
Identities = 341/367 (92%), Gaps = 1/367 (0%)
Strand = Plus / Minus
Query: 855 ggtacgcgtccgcgccgaggtggtccattgcctccgcgcgcttcttggacgacgagctga 914
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 367 ggtacgcgtccgcgcacaggtggtccatcgcctccgcgcgcttcttggacgacgagctga 308
Query: 915 tcaccgtcacgtggtggcccatggccttggctaccttcacgcccatgtggcccacgccgc 974
||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct: 307 tcaccgtcacgtggtggcccatggcattcgccaccttcacgcccatgtggcccacgccgc 248
Query: 975 cgaggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcgggc 1034
| ||||||| |||||| || ||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 247 ccaggcccacgatgccaccgcggaggcccggggccgtcagcccaaaggcctttagcgggc 188
Query: 1035 tgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacccgccg 1094
|||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 187 tgtacaccgttacgcccgcgcacagcagcggcgccgcttgctccggcgccagacccgccg 128
Query: 1095 ggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgg 1154
|||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||
Sbjct: 127 ggatcttcaccacaaacttctggtcgacgaccatggtgaaggcgaagccgccctgcgtgg 68
Query: 1155 gccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaa 1214
|||| || ||||||||||| |||||||| |||||||||||| |||||||||| |||||||
Sbjct: 67 gccggccgtcagtgtagacatcgttgtaggaccagatcttc-tgttgcagtaatgctcaa 9
Query: 1215 cgttggc 1221
|||||||
Sbjct: 8 cgttggc 2
>gb|CD234703.1|CD234703 SS1_17_E08.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_17_E08_A012 5', mRNA sequence
Length = 442
Score = 511 bits (258), Expect = e-143
Identities = 282/290 (97%)
Strand = Plus / Minus
Query: 1255 gatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctc 1314
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 gatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctc 383
Query: 1315 caccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtg 1374
||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 382 caccacctcaccgaccacctcgtgcccagggaccatggggtactttgaagccccgaggtg 323
Query: 1375 gttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccac 1434
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 gttcttggcctggtggatgtccgtgtggcagatcccacagtagagcaccttcaccaccac 263
Query: 1435 atcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtc 1494
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 atcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtc 203
Query: 1495 cctggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 202 cctggcggcccagccgaccaccttcctctcggacgccaggctccccattc 153
>gb|BF705089.1|BF705089 RHIZ2_1_C08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 451
Score = 500 bits (252), Expect = e-139
Identities = 279/288 (96%)
Strand = Plus / Minus
Query: 1257 tcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctcca 1316
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 451 tcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctcca 392
Query: 1317 ccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggt 1376
||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 391 ccacctcaccgaccacctcgtgcccagggaccatggggtactttgaagcccctaggtggt 332
Query: 1377 tcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacat 1436
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 331 tcttggcctggtggatgtccgtgtggcagatcccacagtagagcaccttcaccaccacat 272
Query: 1437 cttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccc 1496
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 271 cttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgtccc 212
Query: 1497 tggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 211 tggcggcccagccgaccaccttcctctcggacgccaggctccccattc 164
>gb|CN134169.1|CN134169 OX1_20_E03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_20_E03_A002 5', mRNA sequence
Length = 471
Score = 498 bits (251), Expect = e-139
Identities = 282/291 (96%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1255 gatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctc 1314
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 471 gatcaccccgacgcctaccacgtcgccgacgccgtacttgctcacctcgggcccgacctc 412
Query: 1315 cacc-acctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggt 1373
|||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 caccgacctcaccgaccacctcgtgcccagggaccatagggtactttgaagccccgaggt 352
Query: 1374 ggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccacca 1433
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 351 ggttcttggcctggtggatgtccgtgtggcagattccacagtagagcaccttcaccacca 292
Query: 1434 catcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgt 1493
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 291 catcttcagggcctgtgttcctgagggtgtaggtgtagggggagaggtgtccggtggcgt 232
Query: 1494 ccctggcggcccacccgaccaccttcctctcggacgccaggctccccattc 1544
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 231 ccctggcggcccagccgaccaccttcctctcggacgccaggctccccattc 181
>gb|CD230229.1|CD230229 SS1_42_G04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_42_G04_A012 3', mRNA sequence
Length = 534
Score = 488 bits (246), Expect = e-136
Identities = 273/282 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 282 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 223
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 163
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 103
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 102 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 43
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcg 755
||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 42 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcg 1
Score = 42.1 bits (21), Expect = 0.16
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 193 gctggtgagactgacaccacaccacattctggcgtactccgagta 237
|||||||| |||||||| |||||| || ||||||||||||||||
Sbjct: 534 gctggtgacactgacac-acaccatatcgtggcgtactccgagta 491
>gb|CD234679.1|CD234679 SS1_17_E08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_17_E08_A012 3', mRNA sequence
Length = 539
Score = 480 bits (242), Expect = e-133
Identities = 272/282 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 282 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 223
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 163
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||
Sbjct: 162 ccttgtcgacgcagaactggagcacctcggcggtctagtcgatgctgccgatgaagctcc 103
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 102 ccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccga 43
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcg 755
||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 42 tgacgcccagcagcacgtgcttgccgtccagcctcagcagcg 1
Score = 52.0 bits (26), Expect = 2e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 192 tgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||| |||| |||||||||| || ||||||||||||||||
Sbjct: 536 tgctggtgacactggcaccacaccatatcgtggcgtactccgagta 491
>gb|BF705012.1|BF705012 RHIZ2_1_C08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 588
Score = 478 bits (241), Expect = e-133
Identities = 277/289 (95%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 293 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 234
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 174
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 173 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 114
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
|||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 113 ccgtgatggccttccggcccagcatcaccatcggggacacgaagctgaggggctcgccga 54
Query: 714 tgacgcccagcagcacgagcttgccgtccagcttcagcagcgccaggta 762
|||||||||||| |||| |||||||||||||| ||||||||| ||||||
Sbjct: 53 tgacgcccagcaacacgtgcttgccgtccagcctcagcagcgacaggta 5
Score = 44.1 bits (22), Expect = 0.041
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 192 tgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 586 tgctggtgacactgacaccacacc-tatcgtggcgtactccgagta 542
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 381 cccgaacgaacgttgcacgcg 401
|||||||||||||||||||||
Sbjct: 389 cccgaacgaacgttgcacgcg 369
>gb|CN134090.1|CN134090 OX1_20_E03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_20_E03_A002 3', mRNA sequence
Length = 560
Score = 474 bits (239), Expect = e-131
Identities = 273/283 (96%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 285 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 226
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatct-gggaggtgagc 592
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 225 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatcttgggaggtgagc 166
Query: 593 cccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctc 652
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 165 cccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctc 106
Query: 653 cccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccg 712
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 105 cccgtgatggccttccgccccagcatcaccatcggggacacgaagctgaggggctcgccg 46
Query: 713 atgacgcccagcagcacgagcttgccgtccagcttcagcagcg 755
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 45 atgacgcccagcagcacgtgcttgccgtccagcctcagcagcg 3
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 551 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 494
>gb|BG559736.1|BG559736 RHIZ2_73_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 582
Score = 460 bits (232), Expect = e-127
Identities = 262/272 (96%)
Strand = Plus / Minus
Query: 474 cctcgacgttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcca 533
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 272 cctcgacgttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcga 213
Query: 534 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gccgctccagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagcc 153
Query: 594 ccttgtcgacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctcc 653
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 152 ccttgtcgacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctcc 93
Query: 654 ccgtgatggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccga 713
|||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 92 ccgtgatggccttccggcccagcatcaccatcggggacacgaagctgaggggctcgccga 33
Query: 714 tgacgcccagcagcacgagcttgccgtccagc 745
|||||||||||| |||| ||||||||||||||
Sbjct: 32 tgacgcccagcaacacgtgcttgccgtccagc 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 180 gcaaatccagattgctggtgagactgacaccacaccacattctggcgtactccgagta 237
||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 578 gcaaatccagaatgctggtgacactgacaccacaccatatcgtggcgtactccgagta 521
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 381 cccgaacgaacgttgcacgcg 401
|||||||||||||||||||||
Sbjct: 368 cccgaacgaacgttgcacgcg 348
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 694,393
Number of Sequences: 832831
Number of extensions: 694393
Number of successful extensions: 262945
Number of sequences better than 0.5: 243
Number of HSP's better than 0.5 without gapping: 241
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 262037
Number of HSP's gapped (non-prelim): 868
length of query: 1669
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1649
effective length of database: 474,703,049
effective search space: 782785327801
effective search space used: 782785327801
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)