BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161200.2.2
(1078 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stres... 1025 0.0
gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkali... 884 0.0
gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sor... 837 0.0
gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorgh... 809 0.0
gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient se... 799 0.0
gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle... 767 0.0
gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (L... 755 0.0
gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2... 751 0.0
gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Me... 749 0.0
gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 ... 745 0.0
gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Me... 729 0.0
gb|BG947358.1|BG947358 IP1_4_E06.g1_A002 Immature pannicle ... 680 0.0
gb|AW746346.1|AW746346 WS1_40_A04.g1_A002 Water-stressed 1 ... 652 0.0
gb|BG241569.1|BG241569 RHIZ2_17_B11.g1_A003 Rhizome2 (RHIZ2... 652 0.0
gb|AW922521.1|AW922521 DG1_20_G09.g1_A002 Dark Grown 1 (DG1... 650 0.0
gb|BI098162.1|BI098162 IP1_32_H05.g1_A002 Immature pannicle... 650 0.0
gb|BI139719.1|BI139719 IP1_48_C06.g1_A002 Immature pannicle... 646 0.0
gb|BG048495.1|BG048495 OV1_14_C05.g2_A002 Ovary 1 (OV1) Sor... 628 e-178
gb|BF587892.1|BF587892 FM1_34_B12.g1_A003 Floral-Induced Me... 620 e-176
gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorgh... 599 e-169
gb|BI099533.1|BI099533 IP1_43_D11.g1_A002 Immature pannicle... 539 e-151
gb|BI075695.1|BI075695 IP1_24_A08.g1_A002 Immature pannicle... 531 e-149
gb|BG054010.1|BG054010 OV2_1_B06.g1_A002 Ovary 2 (OV2) Sorg... 505 e-141
gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorg... 486 e-135
gb|BE918655.1|BE918655 FM1_2_H09.g1_A003 Floral-Induced Mer... 478 e-133
gb|CF072581.1|CF072581 FE1_3_H04.g1_A002 Iron-deficient see... 474 e-132
gb|CN134402.1|CN134402 OX1_26_D08.b1_A002 Oxidatively-stres... 468 e-130
gb|BF481348.1|BF481348 FM1_18_H06.g1_A003 Floral-Induced Me... 438 e-121
gb|CX613230.1|CX613230 GABR1_7_B06.b1_A002 GA- or brassinol... 414 e-114
gb|CX621252.1|CX621252 GABR1_57_B05.b1_A002 GA- or brassino... 414 e-114
gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-respon... 381 e-104
gb|BG047859.1|BG047859 OV1_28_F10.b1_A002 Ovary 1 (OV1) Sor... 375 e-102
gb|AW284400.1|AW284400 LG1_289_B06.g1_A002 Light Grown 1 (L... 363 2e-098
gb|BI141124.1|BI141124 IP1_43_D11.b1_A002 Immature pannicle... 355 5e-096
gb|BG739401.1|BG739401 EM1_82_E02.g1_A002 Embryo 1 (EM1) So... 321 8e-086
gb|AW564290.1|AW564290 LG1_289_B06.b1_A002 Light Grown 1 (L... 254 1e-065
gb|BF421490.1|BF421490 FM1_8_D07.g1_A003 Floral-Induced Mer... 125 9e-027
gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum met... 68 2e-009
gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorgh... 68 2e-009
gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorgh... 68 2e-009
gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation... 68 2e-009
gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG... 68 2e-009
gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seed... 68 2e-009
gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/c... 68 2e-009
gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinol... 68 2e-009
gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassino... 68 2e-009
gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassino... 68 2e-009
gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient se... 66 7e-009
gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorgh... 62 1e-007
gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorgh... 62 1e-007
gb|CW212992.1|CW212992 104_644_11191313_116_37026_073 Sorgh... 62 1e-007
gb|CW407797.1|CW407797 fsbb001f101g18f0 Sorghum methylation... 62 1e-007
gb|CW407798.1|CW407798 fsbb001f101g18k0 Sorghum methylation... 62 1e-007
gb|CD220536.1|CD220536 CCC1_67_H06.g1_A007 Callus culture/c... 62 1e-007
gb|CX611325.1|CX611325 ANR1_24_B05.b1_A002 Anaerobic roots ... 62 1e-007
gb|CX616301.1|CX616301 GABR1_27_D03.b1_A002 GA- or brassino... 60 4e-007
gb|CW216644.1|CW216644 104_649_11195227_116_37125_072 Sorgh... 56 7e-006
gb|CW269890.1|CW269890 104_741_11402081_116_35322_075 Sorgh... 56 7e-006
gb|CW451021.1|CW451021 fsbb001f189o18k0 Sorghum methylation... 56 7e-006
gb|CW163892.1|CW163892 104_571_11151698_148_36455_003 Sorgh... 46 0.007
gb|CD220687.1|CD220687 CCC1_68_E02.g1_A007 Callus culture/c... 46 0.007
gb|CW159690.1|CW159690 104_566_11149490_116_36424_015 Sorgh... 44 0.027
gb|CW346253.1|CW346253 104_849_11488925_116_36217_021 Sorgh... 40 0.41
gb|CW346254.1|CW346254 104_849_11488925_148_36218_021 Sorgh... 40 0.41
gb|CW415704.1|CW415704 fsbb001f115o22f0 Sorghum methylation... 40 0.41
gb|CD209284.1|CD209284 HS1_47_G07.g1_A012 Heat-shocked seed... 40 0.41
gb|CF480786.1|CF480786 POL1_67_H01.g1_A002 Pollen Sorghum b... 40 0.41
gb|CX617289.1|CX617289 GABR1_32_H02.g1_A002 GA- or brassino... 40 0.41
>gb|CN134485.1|CN134485 OX1_26_D08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D08_A002 5', mRNA sequence
Length = 814
Score = 1025 bits (517), Expect = 0.0
Identities = 738/808 (91%), Gaps = 4/808 (0%)
Strand = Plus / Plus
Query: 50 ccttacgaagaaatactgaggacattccacaaccaaaccgacaatgttatgtgctcatat 109
||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 1 ccttacgaagaaa-actgaggacattccacaaccaaactgacaacgttatgtgctcgtat 59
Query: 110 ctgcctctattcaattcattcaacttcactaaaggaggactaatacaactcaaccatgga 169
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 60 ttacctctattcaattcattcaacttcactaaaggaggattaatacaactcaaccatgga 119
Query: 170 aggcctcagccacttcagtacgctgtcaacgcagctttccttgcttctctatacagcgac 229
|||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||| ||
Sbjct: 120 aggcctcaaccacttcagtatgctgtcaatgcagctttccttgcttctttatacagtgat 179
Query: 230 tatcttgaagctgcagacacgcctgggtggtactgcggacctaacttctacaccacagaa 289
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 180 tatcttgaagctgcagacacgcctgggtggtactgtggacctaatttctacaccacagaa 239
Query: 290 gtcctccgcaagtttgccaggtcacagctcgactacatccttggcaagaacccattgaag 349
||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 240 gtcctccgcaagtttgccaggtcacagcttgattacatccttggaaagaacccattaaag 299
Query: 350 atgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagaggcgcg 409
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 300 atgagctacgttgtgggttttggaaacaagtacccgaagcgccctcatcacagaggtgca 359
Query: 410 tcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggagggacaca 469
|| |||||||| || |||||||||||||| |||||||||||||| || |||||||| |||
Sbjct: 360 tcaatacctcataatggcgtcaagtatggatgcaaaggaggttataaatggagggataca 419
Query: 470 aagaaggcaaaccctaacatccttgtcggagcaatggtggctggccccgacaggcgtgat 529
|| |||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||
Sbjct: 420 aaaaaggcaaaccctaatatccttgttggagcaatggtggctggccctgacaggcatgat 479
Query: 530 ggctacaaagatgtccgcacgaactacaactacacggagcctactctcgcagcgaatgct 589
|||||||||||||||||||| |||||||| ||| | ||||||||||| ||||| ||||||
Sbjct: 480 ggctacaaagatgtccgcacaaactacaattactcagagcctactcttgcagcaaatgct 539
Query: 590 ggtctggttgcagcgctgatctctatatccgatatcaaaaccggacggttcggcatcgat 649
||| |||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 540 ggtttggttgcagcactgatttctatatctgatatcaaaactggacggttcggcattgat 599
Query: 650 aagaacaccatcttctctgcgattcctccgatgttcccaacgcccccgccgccgccatca 709
|||||||||||||||||||| |||||||| ||||||||||| ||||| || ||||| |||
Sbjct: 600 aagaacaccatcttctctgcaattcctccaatgttcccaacacccccaccaccgccttca 659
Query: 710 gcatggaaaccatagagaggcaatacctctgaatgttttttccaaagcatcgaacaggga 769
|||||||||||||| |||| | | ||||||||| | |||||||||||||| || |||||
Sbjct: 660 gcatggaaaccataaagagac-agacctctgaa--tattttccaaagcatcaaataggga 716
Query: 770 agtggagcaaacgtgtgatcatttggtacagcgaaggccagagacaggaaagctgacagc 829
|||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||||||
Sbjct: 717 agtggagcaaacatatgatcatttggtacagcagaggccaggaacaggaaagcggacagc 776
Query: 830 ataagtttatagagcttctatttctgta 857
||||| ||||||||||| ||||||||||
Sbjct: 777 ataagcttatagagcttgtatttctgta 804
>gb|CN124667.1|CN124667 RHOH1_6_E05.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_6_E05_A002 3', mRNA sequence
Length = 826
Score = 884 bits (446), Expect = 0.0
Identities = 646/709 (91%), Gaps = 4/709 (0%)
Strand = Plus / Plus
Query: 323 tacatccttggcaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtac 382
||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 4 tacatccttggaaagaacccattaaagatgagctacgttgtgggttttggaaacaagtac 63
Query: 383 ccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgc 442
||||||||||||||||||||||| || || |||||||| || |||||||||||||| |||
Sbjct: 64 ccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaagtatggatgc 123
Query: 443 aaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagca 502
|||||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 124 aaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatccttgttggagca 183
Query: 503 atggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactacaactac 562
|||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 184 atggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactacaattac 243
Query: 563 acggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgat 622
| ||||||||||| ||||| ||||||||| |||||||||| ||||| |||||||| |||
Sbjct: 244 tcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctatatctgat 303
Query: 623 atcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatg 682
|||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 304 atcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcctccaatg 363
Query: 683 ttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaa 742
|||||||| ||||| || ||||||||||||||||||||||| |||| | | |||||||||
Sbjct: 364 ttcccaacacccccaccaccgccatcagcatggaaaccataaagagac-agacctctgaa 422
Query: 743 tgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcg 802
| |||||||||||||| || ||||||||||||||||| | |||||||||||||||||
Sbjct: 423 --tattttccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagca 480
Query: 803 aaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatcaat 862
|||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| | |
Sbjct: 481 aaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgt 540
Query: 863 atgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtg 922
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 541 atgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtg 600
Query: 923 gagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttctttt 982
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 601 aagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc-ttt 659
Query: 983 ttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
|||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 660 ttgtagaaatggcacctttacaaattattttataggagtgacttttcat 708
>gb|BG048182.1|BG048182 OV1_28_F10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 683
Score = 837 bits (422), Expect = 0.0
Identities = 623/685 (90%), Gaps = 5/685 (0%)
Strand = Plus / Plus
Query: 324 acatccttggcaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtacc 383
|||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 1 acatccttggaaagaacccattaaagatgagctacgttgtgggttttggaaacaagtacc 60
Query: 384 cgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgca 443
|||||||||||||||||||||| || || |||||||| || |||||||||||||| ||||
Sbjct: 61 cgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaagtatggatgca 120
Query: 444 aaggaggttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaa 503
||||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||
Sbjct: 121 aaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatccttgttggagcaa 180
Query: 504 tggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactacaactaca 563
||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 181 tggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactacaattact 240
Query: 564 cggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgata 623
| ||||||||||| ||||| ||||||||| |||||||||| ||||| |||||||| ||||
Sbjct: 241 cagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctatatctgata 300
Query: 624 tcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgt 683
||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 301 tcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcctccaatgt 360
Query: 684 tcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaat 743
||||||| ||||| || ||||||||||||||||||||||| |||| | | |||||||||
Sbjct: 361 tcccaacacccccaccaccgccatcagcatggaaaccataaagagac-agacctctgaa- 418
Query: 744 gttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcga 803
| |||||||||||||| || ||||||||||||||||| | ||||||||||||||||| |
Sbjct: 419 -tattttccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaa 477
Query: 804 aggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatcaata 863
||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| | ||
Sbjct: 478 aggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgta 537
Query: 864 tgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtgg 923
|||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 538 tgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtga 597
Query: 924 agctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttt 983
||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||
Sbjct: 598 agctaatttttgggggtgttgttgctattggcattccagctcatgtgt-aagttc-tttt 655
Query: 984 tgtagaaatggtacctttacaaatt 1008
||||||||||| |||||||||||||
Sbjct: 656 tgtagaaatggcacctttacaaatt 680
>gb|CL175876.1|CL175876 104_381_10892754_148_31764_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 732
Score = 809 bits (408), Expect = 0.0
Identities = 599/659 (90%), Gaps = 4/659 (0%)
Strand = Plus / Minus
Query: 373 aaacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaa 432
||||||||||||||||||||||||||||||||| || || |||||||| || ||||||||
Sbjct: 731 aaacaagtacccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaa 672
Query: 433 gtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatcct 492
|||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 671 gtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatcct 612
Query: 493 tgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaa 552
||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||
Sbjct: 611 tgttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaa 552
Query: 553 ctacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctc 612
|||||| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||
Sbjct: 551 ctacaattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttc 492
Query: 613 tatatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgat 672
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 491 tatatctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaat 432
Query: 673 tcctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaa 732
|||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||| | |
Sbjct: 431 tcctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagac-a 373
Query: 733 tacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatt 792
||||||||| | |||||||||||||| || ||||||||||||||||| | ||||||||
Sbjct: 372 gacctctgaa--tattttccaaagcatcaaatagggaagtggagcaaacatatgatcatt 315
Query: 793 tggtacagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctattt 852
||||||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 314 tggtacagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtattt 255
Query: 853 ctgtatcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgt 912
||||| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 254 ctgtacccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgt 195
Query: 913 gcatcgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtg 972
|||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 194 gcatcgcgtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtg 135
Query: 973 aagttcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
|||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 134 aagttc-tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 77
>gb|CF071090.1|CF071090 FE1_15_F06.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_F06_A002 3', mRNA sequence
Length = 674
Score = 799 bits (403), Expect = 0.0
Identities = 601/662 (90%), Gaps = 5/662 (0%)
Strand = Plus / Plus
Query: 371 ggaaacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtc 430
||||||||||||||||||||||||||||||||||| || || |||||||| || ||||||
Sbjct: 4 ggaaacaagtacccgaagcgccctcatcacagaggtgcttcaatacctcataatggcgtc 63
Query: 431 aagtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatc 490
|||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 64 aagtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatc 123
Query: 491 cttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacg 550
||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 124 cttgttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcaca 183
Query: 551 aactacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatc 610
|||||||| ||| | ||||||||||| ||||| ||||||||| |||||||||| |||||
Sbjct: 184 aactacaattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatt 243
Query: 611 tctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcg 670
|||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 244 tctatatctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgca 303
Query: 671 attcctccgatgttcccaacgcccccgccgccgccat-cagcatggaaaccatagagagg 729
|||||||| ||||||||||| ||||| || ||||||| |||||||||||||||| ||||
Sbjct: 304 attcctccaatgttcccaacacccccaccaccgccatncagcatggaaaccataaagaga 363
Query: 730 caatacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatc 789
| | ||||||||| | |||||||||||||| || ||||||||||||||||| | |||||
Sbjct: 364 c-agacctctgaa--tattttccaaagcatcaaatagggaagtggagcaaacatatgatc 420
Query: 790 atttggtacagcgaaggccagagacaggaaagctgacagcataagtttatagagcttcta 849
|||||||||||| |||||||| |||||||||| ||||||||||| ||||||||||| ||
Sbjct: 421 atttggtacagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgta 480
Query: 850 tttctgtatcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctg 909
|||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 481 tttctgtacccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttg 540
Query: 910 tgtgcatcgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgt 969
||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 541 tgtgcatcgcgtgaagctaatttttgggggtgttgttgctattggcattccagctcatgt 600
Query: 970 gtgaagttcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttc 1029
||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 601 gtgaagttc-tttttgtagaaatggcacctttacaaattattttataggagtgacttttc 659
Query: 1030 at 1031
||
Sbjct: 660 at 661
>gb|BG948189.1|BG948189 IP1_10_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 654
Score = 767 bits (387), Expect = 0.0
Identities = 578/638 (90%), Gaps = 4/638 (0%)
Strand = Plus / Plus
Query: 394 tcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggtta 453
|||||||||||| || || |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1 tcatcacagaggtgcatcaatacctcataatggcgtcaagtatggatgcaaaggaggtta 60
Query: 454 caagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaatggtggctgg 513
||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 61 caaatggagggatacaaaaaaggcaaaccctaatatccttgttggagcaatggtggctgg 120
Query: 514 ccccgacaggcgtgatggctacaaagatgtccgcacgaactacaactacacggagcctac 573
||| ||||||| |||||||||||||||||||||||| |||||||| ||| | ||||||||
Sbjct: 121 ccctgacaggcatgatggctacaaagatgtccgcacaaactacaattactcagagcctac 180
Query: 574 tctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgatatcaaaaccgg 633
||| ||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||| ||
Sbjct: 181 tcttgcagcaaatgctggtttggttgcagcactgatttctatatctgatatcaaaactgg 240
Query: 634 acggttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgcc 693
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 241 acggttcggcattgataagaacaccatcttctctgcaattcctccaatgttcccaacacc 300
Query: 694 cccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttcca 753
||| || ||||||||||||||||||||||| |||| | | ||||||||| | |||||||
Sbjct: 301 cccaccaccgccatcagcatggaaaccataaagagac-agacctctgaa--tattttcca 357
Query: 754 aagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagaga 813
||||||| || ||||||||||||||||| | ||||||||||||||||| |||||||| |
Sbjct: 358 aagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaa 417
Query: 814 caggaaagctgacagcataagtttatagagcttctatttctgtatcaatatgacagatca 873
||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||
Sbjct: 418 caggaaagcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatca 477
Query: 874 gtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaatttt 933
|||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 478 gtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaatttt 537
Query: 934 tgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaaatg 993
||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 538 tgggggtgttgttgctattggcattccagctcatgtgtgaagttc-tttttgtagaaatg 596
Query: 994 gtacctttacaaattgttttatagaagtgacttttcat 1031
| ||||||||||||| |||||||| |||||||||||||
Sbjct: 597 gcacctttacaaattattttataggagtgacttttcat 634
>gb|AW745132.1|AW745132 LG1_386_A11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 617
Score = 755 bits (381), Expect = 0.0
Identities = 562/620 (90%), Gaps = 3/620 (0%)
Strand = Plus / Plus
Query: 295 ccgcaagtttgccaggtcacagctcgactacatccttggcaagaacccattgaagatgag 354
|||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||
Sbjct: 1 ccgcaagtttgccaggtcacagcttgattacatccttggaaagaacccattaaagatgag 60
Query: 355 ctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagaggcgcgtcgat 414
||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 61 ctacgttgtgggttttggaaacaagtacccgaagcgccctcatcacagaggtgcatcaat 120
Query: 415 acctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggagggacacaaagaa 474
|||||| || |||||||||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 121 acctcataatggcgtcaagtatggatgcaaaggaggttacaaatggagggatacaaaaaa 180
Query: 475 ggcaaaccctaacatccttgtcggagcaatggtggctggccccgacaggcgtgatggcta 534
|||||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 181 ggcaaaccctaatatccttgttggagcaatggtggctggccctgacaggcatgatggcta 240
Query: 535 caaagatgtccgcacgaactacaactacacggagcctactctcgcagcgaatgctggtct 594
||||||||||||||| |||||||| ||| | ||||||||||| ||||| ||||||||| |
Sbjct: 241 caaagatgtccgcacaaactacaattactcagagcctactcttgcagcaaatgctggttt 300
Query: 595 ggttgcagcgctgatctctatatccgatatcaaaaccggacggttcggcatcgataagaa 654
||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 301 ggttgcagcactgatttctatatctgatatcaaaactggacggttcggcattgataagaa 360
Query: 655 caccatcttctctgcgattcctccgatgttcccaacgcccccgccgccgccatcagcatg 714
||||||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 361 caccatcttctctgcaattcctccaatgttcccaacacccccaccaccgccatcagcatg 420
Query: 715 gaaaccatagagaggcaatacctctgaatgttttttccaaagcatcgaacagggaagtgg 774
||||||||| |||| | | ||||||||| | |||||||||||||| || ||||||||||
Sbjct: 421 gaaaccataaagagac-agacctctgaa--tattttccaaagcatcaaatagggaagtgg 477
Query: 775 agcaaacgtgtgatcatttggtacagcgaaggccagagacaggaaagctgacagcataag 834
||||||| | ||||||||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 478 agcaaacatatgatcatttggtacagcaaaggccaggaacaggaaagcggacagcataag 537
Query: 835 tttatagagcttctatttctgtatcaatatgacagatcagtataagatcctctgtcagac 894
||||||||||| |||||||||| | |||||||||||||||||| ||||||||||| ||
Sbjct: 538 cttatagagcttgtatttctgtacccgtatgacagatcagtataaaatcctctgtcaaac 597
Query: 895 atagatcggaagctgtgtgc 914
|||||||||||| |||||||
Sbjct: 598 atagatcggaagttgtgtgc 617
>gb|BG101880.1|BG101880 RHIZ2_23_E10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 637
Score = 751 bits (379), Expect = 0.0
Identities = 580/642 (90%), Gaps = 5/642 (0%)
Strand = Plus / Plus
Query: 375 acaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagt 434
||||||||||||||||||||||||||||||| || || |||||||| || ||||||||||
Sbjct: 1 acaagtacccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaagt 60
Query: 435 atgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatccttg 494
|||| ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||
Sbjct: 61 atggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatccttg 120
Query: 495 tcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaact 554
| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||
Sbjct: 121 ttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaact 180
Query: 555 acaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctcta 614
|||| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||
Sbjct: 181 acaattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttcta 240
Query: 615 tatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattc 674
|||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 241 tatctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattc 300
Query: 675 ctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaata 734
|||| ||||||||||| ||||| || ||||||||||||||||||||||| |||| | | |
Sbjct: 301 ctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagac-aga 359
Query: 735 cctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttg 794
|||||||| | |||||||||||||| || ||||||||||||||||| | ||||||||||
Sbjct: 360 cctctgaa--tattttccaaagcatcaaatagggaagtggagcaaacatatgatcatttg 417
Query: 795 gtacagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttct 854
||||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 418 gtacagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttct 477
Query: 855 gtatcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgc 914
||| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 478 gtacccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgc 537
Query: 915 atcgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaa 974
|||||||| |||||||||| |||||| ||| ||||||||||| |||||||||||||| ||
Sbjct: 538 atcgcgtgaagctaattttggggggtgttgctgctattggcattccagctcatgtgt-aa 596
Query: 975 gttcttttttgtagaaatggtacctttacaaattgttttata 1016
|||| ||||||||||||||| ||||||||||||| |||||||
Sbjct: 597 gttc-tttttgtagaaatggcacctttacaaattattttata 637
>gb|BF481319.1|BF481319 FM1_18_E02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 636
Score = 749 bits (378), Expect = 0.0
Identities = 579/641 (90%), Gaps = 5/641 (0%)
Strand = Plus / Plus
Query: 377 aagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtat 436
||||||||||||||||||||||||||||| || || |||||||| || ||||||||||||
Sbjct: 1 aagtacccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaagtat 60
Query: 437 gggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatccttgtc 496
|| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 61 ggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatccttgtt 120
Query: 497 ggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactac 556
|||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct: 121 ggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactac 180
Query: 557 aactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctata 616
|| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||
Sbjct: 181 aattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctata 240
Query: 617 tccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcct 676
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 241 tctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcct 300
Query: 677 ccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacc 736
|| ||||||||||| ||||| || ||||||||||||||||||||||| |||| | | |||
Sbjct: 301 ccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagac-agacc 359
Query: 737 tctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggt 796
|||||| | |||||||||||||| || ||||||||||||||||| | ||||||||||||
Sbjct: 360 tctgaa--tattttccaaagcatcaaatagggaagtggagcaaacatatgatcatttggt 417
Query: 797 acagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgt 856
||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 418 acagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgt 477
Query: 857 atcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcat 916
| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 478 acccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcat 537
Query: 917 cgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagt 976
|||||| |||||||||| |||||| ||| ||||||||||| |||||||||||||| ||||
Sbjct: 538 cgcgtgaagctaattttggggggtgttgctgctattggcattccagctcatgtgt-aagt 596
Query: 977 tcttttttgtagaaatggtacctttacaaattgttttatag 1017
|| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 597 tc-tttttgtagaaatggcacctttacaaattattttatag 636
>gb|AW746192.1|AW746192 WS1_40_A04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 745 bits (376), Expect = 0.0
Identities = 530/579 (91%), Gaps = 3/579 (0%)
Strand = Plus / Plus
Query: 182 cttcagtacgctgtcaacgcagctttccttgcttctctatacagcgactatcttgaagct 241
|||||||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||
Sbjct: 1 cttcagtatgctgtcaatgcagctttccttgcttctttatacagtgattatcttgaagct 60
Query: 242 gcagacacgcctgggtggtactgcggacctaacttctacaccacagaagtcctccgcaag 301
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 61 gcagacacgcctgggtggtactgtggacctaatttctacaccacagaagtcctccgcaag 120
Query: 302 tttgccaggtcacagctcgactacatccttggcaagaacccattgaagatgagctacgtt 361
||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 121 tttgccaggtcacagcttgattacatccttggaaagaacccattaaagatgagctacgtt 180
Query: 362 gtgggtttcggaaacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcac 421
|||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 181 gtgggttttggaaacaagtacccgaagcgccctcatcacagaggtgcatcaatacctcat 240
Query: 422 aacggcgtcaagtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaac 481
|| |||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 241 aatggcgtcaagtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaac 300
Query: 482 cctaacatccttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagat 541
||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 301 cctaatatccttgttggagcaatggtggctggccctgacaggcatgatggctacaaagat 360
Query: 542 gtccgcacgaactacaactacacggagcctactctcgcagcgaatgctggtctggttgca 601
|||||||| |||||||| ||| | ||||||||||| ||||| ||||||||| ||||||||
Sbjct: 361 gtccgcacaaactacaattactcagagcctactcttgcagcaaatgctggtttggttgca 420
Query: 602 gcgctgatctctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatc 661
|| ||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 421 gcactgatttctatatctgatatcaaaactggacggttcggcattgataagaacaccatc 480
Query: 662 ttctctgcgattcctccgatgttcccaacgcccccgccgccgccatcagcatggaaacca 721
|||||||| |||||||| ||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 481 ttctctgcaattcctccaatgttcccaacacccccaccaccgccatcagcatggaaacca 540
Query: 722 tagagaggcaatacctctgaatgttttttccaaagcatc 760
|| |||| | | ||||||||| | ||||||||||||||
Sbjct: 541 taaagagac-agacctctgaa--tattttccaaagcatc 576
>gb|BF481389.1|BF481389 FM1_18_E02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 532
Score = 729 bits (368), Expect = 0.0
Identities = 470/504 (93%)
Strand = Plus / Plus
Query: 6 aggttcttctcagcaggttgagactcttcctaagtccagggtacccttacgaagaaatac 65
|||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 29 aggtccttctcagcaggctgcgactcttcctaagtccagggtacccttacgaagaaatac 88
Query: 66 tgaggacattccacaaccaaaccgacaatgttatgtgctcatatctgcctctattcaatt 125
|||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||
Sbjct: 89 tgaggacattccacaaccaaactgacaacgttatgtgctcgtatttacctctattcaatt 148
Query: 126 cattcaacttcactaaaggaggactaatacaactcaaccatggaaggcctcagccacttc 185
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 149 cattcaacttcactaaaggaggattaatacaactcaaccatggaaggcctcaaccacttc 208
Query: 186 agtacgctgtcaacgcagctttccttgcttctctatacagcgactatcttgaagctgcag 245
|||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 209 agtatgctgtcaatgcagctttccttgcttctttatacagtgattatcttgaagctgcag 268
Query: 246 acacgcctgggtggtactgcggacctaacttctacaccacagaagtcctccgcaagtttg 305
||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 269 acacgcctgggtggtactgtggaccaaatttctacaccacagaagtcctccgcaagtttg 328
Query: 306 ccaggtcacagctcgactacatccttggcaagaacccattgaagatgagctacgttgtgg 365
||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 329 ccaggtcacagcttgattacatccttggaaagaacccattaaagatgagctacgttgtgg 388
Query: 366 gtttcggaaacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacg 425
|||| ||||||||||||||||||||||||||||||||||| || || |||||||| || |
Sbjct: 389 gttttggaaacaagtacccgaagcgccctcatcacagaggtgcatcaatacctcataatg 448
Query: 426 gcgtcaagtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaacccta 485
||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 449 gcgtcaagtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaacccta 508
Query: 486 acatccttgtcggagcaatggtgg 509
| |||||||| |||||||||||||
Sbjct: 509 atatccttgttggagcaatggtgg 532
>gb|BG947358.1|BG947358 IP1_4_E06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 583
Score = 680 bits (343), Expect = 0.0
Identities = 512/565 (90%), Gaps = 4/565 (0%)
Strand = Plus / Plus
Query: 467 acaaagaaggcaaaccctaacatccttgtcggagcaatggtggctggccccgacaggcgt 526
||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||| |
Sbjct: 4 acaaaaaaggcaaaccntaatatccttgttggagcaatggtggctggccctgacaggcat 63
Query: 527 gatggctacaaagatgtccgcacgaactacaactacacggagcctactctcgcagcgaat 586
||||||||||||||||||||||| |||||||| ||| | ||||||||||| ||||| |||
Sbjct: 64 gatggctacaaagatgtccgcacaaactacaattactcagagcctactcttgcagcaaat 123
Query: 587 gctggtctggttgcagcgctgatctctatatccgatatcaaaaccggacggttcggcatc 646
|||||| |||||||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 124 gctggtttggttgcagcactgatttctatatctgatatcaaaactggacggttcggcatt 183
Query: 647 gataagaacaccatcttctctgcgattcctccgatgttcccaacgcccccgccgccgcca 706
||||||||||||||||||||||| |||||||| ||||||||||| ||||| || ||||||
Sbjct: 184 gataagaacaccatcttctctgcaattcctccaatgttcccaacacccccaccaccgcca 243
Query: 707 tcagcatggaaaccatagagaggcaatacctctgaatgttttttccaaagcatcgaacag 766
||||||||||||||||| |||| | | ||||||||| | |||||||||||||| || ||
Sbjct: 244 tcagcatggaaaccataaagagac-agacctctgaa--tattttccaaagcatcaaatag 300
Query: 767 ggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagagacaggaaagctgac 826
||||||||||||||| | ||||||||||||||||| |||||||| |||||||||| |||
Sbjct: 301 ggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaacaggaaagcggac 360
Query: 827 agcataagtttatagagcttctatttctgtatcaatatgacagatcagtataagatcctc 886
|||||||| ||||||||||| |||||||||| | |||||||||||||||||| ||||||
Sbjct: 361 agcataagcttatagagcttgtatttctgtacccgtatgacagatcagtataaaatcctc 420
Query: 887 tgtcagacatagatcggaagctgtgtgcatcgcgtggagctaatttttgggggtcttgtt 946
||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||
Sbjct: 421 tgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaatttttgggggtgttgtt 480
Query: 947 gctattggcactccagctcatgtgtgaagttcttttttgtagaaatggtacctttacaaa 1006
|||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 481 gctattggcattccagctcatgtgtgaagttc-tttttgtagaaatggcacctttacaaa 539
Query: 1007 ttgttttatagaagtgacttttcat 1031
|| |||||||| |||||||||||||
Sbjct: 540 ttattttataggagtgacttttcat 564
>gb|AW746346.1|AW746346 WS1_40_A04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 652 bits (329), Expect = 0.0
Identities = 490/540 (90%), Gaps = 4/540 (0%)
Strand = Plus / Plus
Query: 488 atccttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgc 547
|||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 1 atccttgttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgc 60
Query: 548 acgaactacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctg 607
|| |||||||| ||| | ||||||||||| ||||| ||||||||| |||||||||| |||
Sbjct: 61 acaaactacaattactcagagcctactcttgcagcaaatgctggtttggttgcagcactg 120
Query: 608 atctctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctct 667
|| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 121 atttctatatctgatatcaaaactggacggttcggcattgataagaacaccatcttctct 180
Query: 668 gcgattcctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagaga 727
|| |||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 181 gcaattcctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaaga 240
Query: 728 ggcaatacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtga 787
| || |||||||||| |||| |||||||||| || ||||||||||||||||| | |||
Sbjct: 241 gacag-acctctgaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatga 297
Query: 788 tcatttggtacagcgaaggccagagacaggaaagctgacagcataagtttatagagcttc 847
|||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 298 tcatttggtacagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttg 357
Query: 848 tatttctgtatcaatatgacagatcagtataagatcctctgtcagacatagatcggaagc 907
|||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 358 tatttctgtacccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagt 417
Query: 908 tgtgtgcatcgcgtggagctaatttttgggggtcttgttgctattggcactccagctcat 967
||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 418 tgtgtgcatcgcgtgaagctaatttttgggggtgttgttgctattggcattccagctcat 477
Query: 968 gtgtgaagttcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttt 1027
||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 478 gtgtgaagttc-tttttgtagaaatggcacctttacaaattattttataggagtgacttt 536
>gb|BG241569.1|BG241569 RHIZ2_17_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 568
Score = 652 bits (329), Expect = 0.0
Identities = 513/570 (90%), Gaps = 6/570 (1%)
Strand = Plus / Plus
Query: 425 ggcgtcaagtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccct 484
|||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||| |
Sbjct: 1 ggcgtcaagtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccnt 60
Query: 485 aacatccttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtc 544
|| |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 61 aatatccttgttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtc 120
Query: 545 cgcacgaactacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcg 604
||||| |||||||| ||| | ||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 121 cgcacaaactacaattactcagagcctactcttgcagcaaatgctggtttggttgcagca 180
Query: 605 ctgatctctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttc 664
||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 181 ctgatttctatatctgatatcaaaactggacggttcggcattgataagaacaccatcttc 240
Query: 665 tctgcgattcctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatag 724
||||| |||||||| ||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 241 tctgcaattcctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataa 300
Query: 725 agaggcaatacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtg 784
|||| | | ||||||||| | |||||||||||||| || ||||||||||||||||| |
Sbjct: 301 agagac-agacctctgaa--tattttccaaagcatcaaatagggaagtggagcaaacata 357
Query: 785 tgatcatttggtacagcgaaggccagagacaggaaagctgacagcataagtttatagagc 844
||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 358 tgatcatttggtacagcaaaggccaggaacaggaaagcggacagcataagcttatagagc 417
Query: 845 ttctatttctgtatcaatatgacagatcagtataagatcctctgtcagacatagatcgga 904
|| |||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 418 ttgtatttctgtacccgtatgacagatcagtataaaatcctctgtcaaacatagatcgga 477
Query: 905 agctgtgtgcatcgcgtggagctaatttttgggggtcttgttgctattggcactccagct 964
|| ||||||||||||||| |||||||||| |||||| ||| ||||||||||| |||||||
Sbjct: 478 agttgtgtgcatcgcgtgaagctaattttggggggtgttgctgctattggcattccagct 537
Query: 965 catgtgtgaagttcttttttgtagaaatgg 994
||||||| |||||| ||||||||||||||
Sbjct: 538 catgtgt-aagttc--ttttgtagaaatgg 564
>gb|AW922521.1|AW922521 DG1_20_G09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 679
Score = 650 bits (328), Expect = 0.0
Identities = 486/535 (90%), Gaps = 4/535 (0%)
Strand = Plus / Plus
Query: 497 ggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactac 556
|||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct: 5 ggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactac 64
Query: 557 aactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctata 616
|| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||
Sbjct: 65 aattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctata 124
Query: 617 tccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcct 676
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 125 tctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcct 184
Query: 677 ccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacc 736
|| ||||||||||| ||||| || ||||||||||||||||||||||| |||| || |||
Sbjct: 185 ccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acc 243
Query: 737 tctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggt 796
||||||| |||| |||||||||| || ||||||||||||||||| | ||||||||||||
Sbjct: 244 tctgaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggt 301
Query: 797 acagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgt 856
||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 302 acagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgt 361
Query: 857 atcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcat 916
| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 362 acccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcat 421
Query: 917 cgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagt 976
|||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 422 cgcgtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagt 481
Query: 977 tcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
|| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 482 tc-tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 535
>gb|BI098162.1|BI098162 IP1_32_H05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 535
Score = 650 bits (328), Expect = 0.0
Identities = 486/535 (90%), Gaps = 4/535 (0%)
Strand = Plus / Plus
Query: 497 ggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactac 556
|||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct: 2 ggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactac 61
Query: 557 aactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctata 616
|| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||
Sbjct: 62 aattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctata 121
Query: 617 tccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcct 676
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 122 tctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcct 181
Query: 677 ccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacc 736
|| ||||||||||| ||||| || ||||||||||||||||||||||| |||| || |||
Sbjct: 182 ccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acc 240
Query: 737 tctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggt 796
||||||| |||| |||||||||| || ||||||||||||||||| | ||||||||||||
Sbjct: 241 tctgaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggt 298
Query: 797 acagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgt 856
||||| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 299 acagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgt 358
Query: 857 atcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcat 916
| | |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 359 acccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcat 418
Query: 917 cgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagt 976
|||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 419 cgcgtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagt 478
Query: 977 tcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
|| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 479 tc-tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 532
>gb|BI139719.1|BI139719 IP1_48_C06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 549
Score = 646 bits (326), Expect = 0.0
Identities = 484/533 (90%), Gaps = 4/533 (0%)
Strand = Plus / Plus
Query: 499 agcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactacaa 558
|||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 1 agcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactacaa 60
Query: 559 ctacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctatatc 618
||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 61 ttactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctatatc 120
Query: 619 cgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcctcc 678
||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 121 tgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcctcc 180
Query: 679 gatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctc 738
||||||||||| ||||| || ||||||||||||||||||||||| |||| || |||||
Sbjct: 181 aatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acctc 239
Query: 739 tgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtac 798
||||| |||| |||||||||| || ||||||||||||||||| | ||||||||||||||
Sbjct: 240 tgaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtac 297
Query: 799 agcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtat 858
||| |||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 298 agcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtac 357
Query: 859 caatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcg 918
| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 358 ccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcg 417
Query: 919 cgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttc 978
|||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 418 cgtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc 477
Query: 979 ttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 478 -tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 529
>gb|BG048495.1|BG048495 OV1_14_C05.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 542
Score = 628 bits (317), Expect = e-178
Identities = 485/536 (90%), Gaps = 5/536 (0%)
Strand = Plus / Plus
Query: 482 cctaacatccttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagat 541
||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1 cctaatatccttgttggagcaatggtggctggccctgacaggcatgatggctacaaagat 60
Query: 542 gtccgcacgaactacaactacacggagcctactctcgcagcgaatgctggtctggttgca 601
|||||||| |||||||| ||| | ||||||||||| ||||| ||||||||| ||||||||
Sbjct: 61 gtccgcacaaactacaattactcagagcctactcttgcagcaaatgctggtttggttgca 120
Query: 602 gcgctgatctctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatc 661
|| ||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 121 gcactgatttctatatctgatatcaaaactggacggttcggcattgataagaacaccatc 180
Query: 662 ttctctgcgattcctccgatgttcccaacgcccccgccgccgccatcagcatggaaacca 721
|||||||| |||||||| ||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 181 ttctctgcaattcctccaatgttcccaacacccccaccaccgccatcagcatggaaacca 240
Query: 722 tagagaggcaatacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaac 781
|| |||| | | ||||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 241 taaagagac-agacctctgaa--tattttccaaagcatcaaatagggaagtggagcaaac 297
Query: 782 gtgtgatcatttggtacagcgaaggccagagacaggaaagctgacagcataagtttatag 841
| ||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||
Sbjct: 298 atatgatcatttggtacagcaaaggccaggaacaggaaagcggacagcataagcttatag 357
Query: 842 agcttctatttctgtatcaatatgacagatcagtataagatcctctgtcagacatagatc 901
||||| |||||||||| | |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 358 agcttgtatttctgtacccgtatgacagatcagtataaaatcctctgtcaaacatagatc 417
Query: 902 ggaagctgtgtgcatcgcgtggagctaatttttgggggtcttgttgctattggcactcca 961
||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 418 ggaagttgtgtgcatcgcgtgaagctaatttttgggggtgttgttgctattggcattcca 477
Query: 962 gctcatgtgtgaagttcttttttgtagaaatggtacctttacaaattgttttatag 1017
|||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 478 gctcatgtgt-aagttc-tttttgtagaaatggcacctttacaaattattttatag 531
>gb|BF587892.1|BF587892 FM1_34_B12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 645
Score = 620 bits (313), Expect = e-176
Identities = 484/536 (90%), Gaps = 5/536 (0%)
Strand = Plus / Plus
Query: 497 ggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactac 556
|||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||
Sbjct: 3 ggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaactac 62
Query: 557 aactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctata 616
|| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||
Sbjct: 63 aattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctata 122
Query: 617 tccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcct 676
|| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 123 tctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcct 182
Query: 677 ccgatgttcccaacgcccccg-ccgccgccatcagcatggaaaccatagagaggcaatac 735
|| ||||||||||| ||||| || ||||||||||||||||||||||| |||| || ||
Sbjct: 183 ccaatgttcccaacaccccccaccaccgccatcagcatggaaaccataaagagacag-ac 241
Query: 736 ctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttgg 795
|||||||| |||| |||||||||| || ||||||||||||||||| | |||||||||||
Sbjct: 242 ctctgaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttgg 299
Query: 796 tacagcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctg 855
|||||| |||||||| |||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 300 tacagcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctg 359
Query: 856 tatcaatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgca 915
|| | |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 360 tacccgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgca 419
Query: 916 tcgcgtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaag 975
||||||| |||||||||| |||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 420 tcgcgtgaagctaattttggggggtgttgctgctattggcattccagctcatgtgtgaag 479
Query: 976 ttcttttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 480 ttc-tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 534
>gb|CL175875.1|CL175875 104_381_10892754_116_31765_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892754, DNA
sequence
Length = 733
Score = 599 bits (302), Expect = e-169
Identities = 450/497 (90%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 314 cagctcgactacatccttggcaagaacccattgaagatgagctacgttgtgggtttcgga 373
||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 234 cagcttgattacatccttggaaagaacccattaaagatgagctacgttgtgggttttgga 293
Query: 374 aacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaag 433
|||||||||||||||||||||||||||||||| || || |||||||| || |||||||||
Sbjct: 294 aacaagtacccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaag 353
Query: 434 tatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatcctt 493
||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||
Sbjct: 354 tatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatcctt 413
Query: 494 gtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaac 553
|| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 414 gttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtccgcacaaac 473
Query: 554 tacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctct 613
||||| ||| | ||||||||||| ||||| ||||||||| |||||||||| ||||| |||
Sbjct: 474 tacaattactcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttct 533
Query: 614 atatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgatt 673
||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 534 atatctgatatcaaaactggacggttcggcattgataagaacaccatcttctctgcaatt 593
Query: 674 cctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaat 733
||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||| | |
Sbjct: 594 cctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaagagac-ag 652
Query: 734 acctctgaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcattt 793
||||||||| | |||||||||||||| || ||||||||||||||||| | |||||||||
Sbjct: 653 acctctgaa--tattttccaaagcatcaaatagggaagtggagcaaacatatgatcattt 710
Query: 794 ggtacagcgaaggccag 810
|||||||| ||||||||
Sbjct: 711 ggtacagcaaaggccag 727
Score = 232 bits (117), Expect = 5e-059
Identities = 141/149 (94%)
Strand = Plus / Plus
Query: 168 gaaggcctcagccacttcagtacgctgtcaacgcagctttccttgcttctctatacagcg 227
|||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||| |
Sbjct: 1 gaaggcctcaaccacttcagtatgctgtcaatgcagctttccttgcttctttatacagtg 60
Query: 228 actatcttgaagctgcagacacgcctgggtggtactgcggacctaacttctacaccacag 287
| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 61 attatcttgaagctgcagacacgcctgggtggtactgtggacctaatttctacaccacag 120
Query: 288 aagtcctccgcaagtttgccaggtcacag 316
|||||||||||||||||||||||||||||
Sbjct: 121 aagtcctccgcaagtttgccaggtcacag 149
>gb|BI099533.1|BI099533 IP1_43_D11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 553
Score = 539 bits (272), Expect = e-151
Identities = 418/462 (90%), Gaps = 5/462 (1%)
Strand = Plus / Plus
Query: 570 ctactctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgatatcaaaa 629
||||||| ||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||
Sbjct: 1 ctactcttgcagcaaatgctggtttggttgcagcactgatttctatatctgatatcaaaa 60
Query: 630 ccggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaa 689
| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 61 ctggacggttcggcattgataagaacaccatcttctctgcaattcctccaatgttcccaa 120
Query: 690 cgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttt 749
| ||||| || ||||||||||||||||||||||| |||| || |||||||||| ||||
Sbjct: 121 cacccccaccaccgccatcagcatggaaaccataaagagacag-acctctgaatatttt- 178
Query: 750 tccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggcca 809
|||||||||| || ||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 179 -ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggcca 237
Query: 810 gagacaggaaagctgacagcataagtttatagagcttctatttctgtatcaatatgacag 869
| |||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||
Sbjct: 238 ggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgtatgacag 297
Query: 870 atcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaa 929
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 298 atcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaa 357
Query: 930 tttttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgtaga 989
||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 358 tttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc-tttttgtaga 416
Query: 990 aatggtacctttacaaattgttttataga-agtgacttttca 1030
||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 417 aatggcacctttacaaattattttatagngagtgacttttca 458
>gb|BI075695.1|BI075695 IP1_24_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 457
Score = 531 bits (268), Expect = e-149
Identities = 415/459 (90%), Gaps = 5/459 (1%)
Strand = Plus / Plus
Query: 573 ctctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgatatcaaaaccg 632
|||| ||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||| |
Sbjct: 1 ctcttgcagcaaatgctggtttggttgcagcactgatttctatatctgatatcaaaactg 60
Query: 633 gacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgc 692
||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 61 gacggttcggcattgataagaacaccatcttctctgcaattcctccaatgttcccaacac 120
Query: 693 ccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttcc 752
|||| || ||||||||||||||||||||||| |||| || |||||||||| |||| ||
Sbjct: 121 ccccaccaccgccatcagcatggaaaccataaagagacag-acctctgaatatttt--cc 177
Query: 753 aaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagag 812
|||||||| || ||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 178 aaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccagga 237
Query: 813 acaggaaagctgacagcataagtttatagagcttctatttctgtatcaatatgacagatc 872
|||||||||| ||||||||||| ||||||||||| |||||||||| | |||||||||||
Sbjct: 238 acaggaaagcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatc 297
Query: 873 agtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaattt 932
||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||||
Sbjct: 298 agtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaattt 357
Query: 933 ttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaaat 992
|||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||
Sbjct: 358 ttgggggtgttgttgctattggcattccagctcatgtgtgaa-ttc-tttttgtagaaat 415
Query: 993 ggtacctttacaaattgttttatagaagtgacttttcat 1031
|| ||||||||||||| |||||||| |||||||||||||
Sbjct: 416 ggcacctttacaaattattttataggagtgacttttcat 454
>gb|BG054010.1|BG054010 OV2_1_B06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 452
Score = 505 bits (255), Expect = e-141
Identities = 408/454 (89%), Gaps = 5/454 (1%)
Strand = Plus / Plus
Query: 571 tactctcgcagcgaatgctggtctggttgcagcgctgatctctatatccgatatcaaaac 630
|||||| ||||| ||||||||| |||||||||| ||||| |||||||| |||||||||||
Sbjct: 2 tactcttgcagcaaatgctggtttggttgcagcactgatttctatatctgatatcaaaac 61
Query: 631 cggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaac 690
|||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 62 tggacggttcggcattgataagaacaccatcttctctgcaattcctccaatgttcccaac 121
Query: 691 gcccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgtttttt 750
||||| || ||||||||||||||||||||||| |||| || |||||||||| ||||
Sbjct: 122 acccccaccaccgccatcagcatggaaaccataaagagacag-acctctgaatatttt-- 178
Query: 751 ccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccag 810
|||||||||| || ||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 179 ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccag 238
Query: 811 agacaggaaagctgacagcataagtttatagagcttctatttctgtatcaatatgacaga 870
|||||||||| ||||||||||| ||||||||||| |||||||||| | |||||||||
Sbjct: 239 gaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgtatgacaga 298
Query: 871 tcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaat 930
||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||
Sbjct: 299 tcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaat 358
Query: 931 ttttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaa 990
|||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 359 ttttgggggtgttgttgctattggcattccagctcatgtgt-aagttc-tttttgtagaa 416
Query: 991 atggtacctttacaaattgttttatagaagtgac 1024
|||| ||||| |||||| |||||||| ||||||
Sbjct: 417 atggcaccttgtcaaattattttataggagtgac 450
>gb|BG054019.1|BG054019 OV2_1_C08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 424
Score = 486 bits (245), Expect = e-135
Identities = 375/416 (90%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 366 gtttcggaaacaagtacccgaagcgccctcatcacagaggcgcgtcgatacctcacaacg 425
|||| ||||||||||||||||||||||||||||||||||| || || |||||||| | |
Sbjct: 1 gttttggaaacaagtacccgaagcgccctcatcacagaggtgcatcaatacctcatagtg 60
Query: 426 gcgtcaagtatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaacccta 485
||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 61 gcgtcaagtatggatgcaaaggaggttacaaatggagggatacaaaaaaggcaaacccta 120
Query: 486 acatccttgtcggagcaatggtggctggccccgacaggcgtgatggctacaaagatgtcc 545
| |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 121 atatccttgttggagcaatggtggctggccctgacaggcatgatggctacaaagatgtcc 180
Query: 546 gcacgaactacaactacacggagcctactctcgcagcgaatgctggtctggttgcagcgc 605
|||| |||||||| ||| | ||||||||||| ||||| ||||||||| |||||||||| |
Sbjct: 181 gcacaaactacaattactcagagcctactcttgcagcaaatgctggtttggttgcagcac 240
Query: 606 tgatctctatatccgatatcaaaaccggacggttcggcatcgataagaacaccatcttct 665
|||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 241 tgatttctatatctgatatcaaaactggacggttcggcattgataagaacaccatcttct 300
Query: 666 ctgcgattcctccgatgttcccaacgcccccgccgccgccatcagcatggaaaccataga 725
|||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |
Sbjct: 301 ctgcaattcctccaatgttcccaacacccccaccaccgccatcagcatggaaaccataaa 360
Query: 726 gaggcaatacctctgaatgttttttccaaagcatcgaacagggaagtggagcaaac 781
||| | | ||||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 361 gagac-agacctctgaa--tattttccaaagcatcaaatagggaagtggagcaaac 413
>gb|BE918655.1|BE918655 FM1_2_H09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 418
Score = 478 bits (241), Expect = e-133
Identities = 366/404 (90%), Gaps = 4/404 (0%)
Strand = Plus / Plus
Query: 624 tcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgt 683
||||||| | |||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 1 tcaaaactgcacggttcggcattgataagaacaccatcttctctgcaattcctccaatgt 60
Query: 684 tcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaat 743
||||||| ||||| || ||||||||||||||||||||||| |||| || ||||||||||
Sbjct: 61 tcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acctctgaat 119
Query: 744 gttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcga 803
|||| |||||||||| || ||||||||||||||||| | ||||||||||||||||| |
Sbjct: 120 atttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaa 177
Query: 804 aggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatcaata 863
||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| | ||
Sbjct: 178 aggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgta 237
Query: 864 tgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtgg 923
|||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 238 tgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtga 297
Query: 924 agctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttt 983
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 298 agctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc-tttt 356
Query: 984 tgtagaaatggtacctttacaaattgttttatagaagtgacttt 1027
||||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 357 tgtagaaatggcacctttacaaattattttataggagtgacttt 400
>gb|CF072581.1|CF072581 FE1_3_H04.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone
FE1_3_H04_A002 5', mRNA sequence
Length = 433
Score = 474 bits (239), Expect = e-132
Identities = 358/394 (90%), Gaps = 4/394 (1%)
Strand = Plus / Minus
Query: 638 ttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgcccccg 697
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 433 ttcggcattgataagaacaccatcttctctgcaattcctccaatgttcccaacaccccca 374
Query: 698 ccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttccaaagc 757
|| ||||||||||||||||||||||| |||| || |||||||||| |||| |||||||
Sbjct: 373 ccaccgccatcagcatggaaaccataaagagacag-acctctgaatatttt--ccaaagc 317
Query: 758 atcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagagacagg 817
||| || ||||||||||||||||| | ||||||||||||||||| |||||||| |||||
Sbjct: 316 atcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaacagg 257
Query: 818 aaagctgacagcataagtttatagagcttctatttctgtatcaatatgacagatcagtat 877
||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 256 aaagcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatcagtat 197
Query: 878 aagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaatttttggg 937
|| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 196 aaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaatttttggg 137
Query: 938 ggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaaatggtac 997
||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 136 ggtgttgttgctattggcattccagctcatgtgtgaagttc-tttttgtagaaatggcac 78
Query: 998 ctttacaaattgttttatagaagtgacttttcat 1031
||||||||||| |||||||| |||||||||||||
Sbjct: 77 ctttacaaattattttataggagtgacttttcat 44
>gb|CN134402.1|CN134402 OX1_26_D08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D08_A002 3', mRNA sequence
Length = 476
Score = 468 bits (236), Expect = e-130
Identities = 355/391 (90%), Gaps = 4/391 (1%)
Strand = Plus / Plus
Query: 641 ggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgcccccgccg 700
||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 1 ggcattgataagaacaccatcttctctgcaattcctccaatgttcccaacacccccacca 60
Query: 701 ccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttccaaagcatc 760
||||||||||||||||||||||| |||| || |||||||||| |||| ||||||||||
Sbjct: 61 ccgccatcagcatggaaaccataaagagacag-acctctgaatatttt--ccaaagcatc 117
Query: 761 gaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagagacaggaaa 820
|| ||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||
Sbjct: 118 aaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaacaggaaa 177
Query: 821 gctgacagcataagtttatagagcttctatttctgtatcaatatgacagatcagtataag 880
|| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 178 gcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatcagtataaa 237
Query: 881 atcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaatttttgggggt 940
||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 238 atcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaatttttgggggt 297
Query: 941 cttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaaatggtacctt 1000
||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 298 gttgttgctattggcattccagctcatgtgtgaagttc-tttttgtagaaatggcacctt 356
Query: 1001 tacaaattgttttatagaagtgacttttcat 1031
|||||||| |||||||| |||||||||||||
Sbjct: 357 tacaaattattttataggagtgacttttcat 387
>gb|BF481348.1|BF481348 FM1_18_H06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 492
Score = 438 bits (221), Expect = e-121
Identities = 353/392 (90%), Gaps = 5/392 (1%)
Strand = Plus / Plus
Query: 641 ggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgcccccg-cc 699
||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 1 ggcattgataagaacaccatcttctctgcaattcctccaatgttcccaacaccccccacc 60
Query: 700 gccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttccaaagcat 759
||||||||||||||||||||||| |||| || |||||||||| |||| |||||||||
Sbjct: 61 accgccatcagcatggaaaccataaagagacag-acctctgaatatttt--ccaaagcat 117
Query: 760 cgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagagacaggaa 819
| || ||||||||||||||||| | ||||||||||||||||| |||||||| |||||||
Sbjct: 118 caaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaacaggaa 177
Query: 820 agctgacagcataagtttatagagcttctatttctgtatcaatatgacagatcagtataa 879
||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||
Sbjct: 178 agcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatcagtataa 237
Query: 880 gatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagctaatttttggggg 939
||||||||||| |||||||||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 238 aatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagctaattttgggggg 297
Query: 940 tcttgttgctattggcactccagctcatgtgtgaagttcttttttgtagaaatggtacct 999
| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 298 tgttgctgctattggcattccagctcatgtgtgaagttc-tttttgtagaaatggcacct 356
Query: 1000 ttacaaattgttttatagaagtgacttttcat 1031
||||||||| |||||||| |||||||||||||
Sbjct: 357 ttacaaattattttataggagtgacttttcat 388
>gb|CX613230.1|CX613230 GABR1_7_B06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_7_B06_A002 3', mRNA sequence
Length = 501
Score = 414 bits (209), Expect = e-114
Identities = 319/352 (90%), Gaps = 4/352 (1%)
Strand = Plus / Plus
Query: 680 atgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctct 739
||||||||||| ||||| || ||||||||||||||||||||||| |||| || ||||||
Sbjct: 2 atgttcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acctct 60
Query: 740 gaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtaca 799
|||| |||| |||||||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 61 gaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtaca 118
Query: 800 gcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatc 859
|| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| |
Sbjct: 119 gcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacc 178
Query: 860 aatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgc 919
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 179 cgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgc 238
Query: 920 gtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttct 979
||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 239 gtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc- 297
Query: 980 tttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 298 tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 349
>gb|CX621252.1|CX621252 GABR1_57_B05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_B05_A002 3', mRNA sequence
Length = 362
Score = 414 bits (209), Expect = e-114
Identities = 319/352 (90%), Gaps = 4/352 (1%)
Strand = Plus / Plus
Query: 680 atgttcccaacgcccccgccgccgccatcagcatggaaaccatagagaggcaatacctct 739
||||||||||| ||||| || ||||||||||||||||||||||| |||| || ||||||
Sbjct: 1 atgttcccaacacccccaccaccgccatcagcatggaaaccataaagagacag-acctct 59
Query: 740 gaatgttttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtaca 799
|||| |||| |||||||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 60 gaatatttt--ccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtaca 117
Query: 800 gcgaaggccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatc 859
|| |||||||| |||||||||| ||||||||||| ||||||||||| |||||||||| |
Sbjct: 118 gcaaaggccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacc 177
Query: 860 aatatgacagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgc 919
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 178 cgtatgacagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgc 237
Query: 920 gtggagctaatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttct 979
||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 238 gtgaagctaatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc- 296
Query: 980 tttttgtagaaatggtacctttacaaattgttttatagaagtgacttttcat 1031
||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 297 tttttgtagaaatggcacctttacaaattattttataggagtgacttttcat 348
>gb|DR831463.2|DR831463 MM79 Sorghum bicolor greenbug-responsive cDNA library Sorghum
bicolor cDNA 5', mRNA sequence
Length = 304
Score = 381 bits (192), Expect = e-104
Identities = 276/304 (90%)
Strand = Plus / Plus
Query: 381 acccgaagcgccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggt 440
||||||||||||||||||||||||| || || |||||||| || |||||||||||||| |
Sbjct: 1 acccgaagcgccctcatcacagaggtgcatcaatacctcataatggcgtcaagtatggat 60
Query: 441 gcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggag 500
|||||||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 61 gcaaaggaggttacaaatggagggatacaaaaaaggcaaaccctaatatccttgttggag 120
Query: 501 caatggtggctggccccgacaggcgtgatggctacaaagatgtccgcacgaactacaact 560
|||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |
Sbjct: 121 caatggtggctggccctgacaggtatgatggctacaaagatgtccgcacaaactacaatt 180
Query: 561 acacggagcctactctcgcagcgaatgctggtctggttgcagcgctgatctctatatccg 620
|| | ||||||||||| ||||| ||||||||| |||||||||| ||||| |||||||| |
Sbjct: 181 actcagagcctactcttgcagcaaatgctggtttggttgcagcactgatttctatatctg 240
Query: 621 atatcaaaaccggacggttcggcatcgataagaacaccatcttctctgcgattcctccga 680
|||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |
Sbjct: 241 atatcaaaactggacggttcggcattgataagaacaccatcttctctgcaattcctccaa 300
Query: 681 tgtt 684
||||
Sbjct: 301 tgtt 304
>gb|BG047859.1|BG047859 OV1_28_F10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 375 bits (189), Expect = e-102
Identities = 234/249 (93%)
Strand = Plus / Plus
Query: 6 aggttcttctcagcaggttgagactcttcctaagtccagggtacccttacgaagaaatac 65
|||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aggtccttctcagcaggctgcgactcttcctaagtccagggtacccttacgaagaaatac 350
Query: 66 tgaggacattccacaaccaaaccgacaatgttatgtgctcatatctgcctctattcaatt 125
|||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||
Sbjct: 351 tgaggacattccacaaccaaactgacaacgttatgtgctcgtatttacctctattcaatt 410
Query: 126 cattcaacttcactaaaggaggactaatacaactcaaccatggaaggcctcagccacttc 185
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 411 cattcaacttcactaaaggaggattaatacaactcaaccatggaaggcctcaaccacttc 470
Query: 186 agtacgctgtcaacgcagctttccttgcttctctatacagcgactatcttgaagctgcag 245
|||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 471 agtatgctgtcaatgcagctttccttgcttctttatacagtgattatcttgaagctgcag 530
Query: 246 acacgcctg 254
|||||||||
Sbjct: 531 acacgcctg 539
>gb|AW284400.1|AW284400 LG1_289_B06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 300
Score = 363 bits (183), Expect = 2e-098
Identities = 259/283 (91%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 747 ttttccaaagcatcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaagg 806
|||||||||||||| || ||||||||||||||||| | ||||||||||||||||| ||||
Sbjct: 15 ttttccaaagcatcaaatagggaagtggagcaaacatatgatcatttggtacagcaaagg 74
Query: 807 ccagagacaggaaagctgacagcataagtttatagagcttctatttctgtatcaatatga 866
|||| |||||||||| ||||||||||| ||||||||||| |||||||||| | |||||
Sbjct: 75 ccaggaacaggaaagcggacagcataagcttatagagcttgtatttctgtacccgtatga 134
Query: 867 cagatcagtataagatcctctgtcagacatagatcggaagctgtgtgcatcgcgtggagc 926
||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||
Sbjct: 135 cagatcagtataaaatcctctgtcaaacatagatcggaagttgtgtgcatcgcgtgaagc 194
Query: 927 taatttttgggggtcttgttgctattggcactccagctcatgtgtgaagttcttttttgt 986
|||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 195 taatttttgggggtgttgttgctattggcattccagctcatgtgtgaagttc-tttttgt 253
Query: 987 agaaatggtacctttacaaattgttttatagaagtgacttttc 1029
|||||||| |||||||||||| |||||||| |||||||||||
Sbjct: 254 agaaatggcccctttacaaattattttataggagtgacttttc 296
>gb|BI141124.1|BI141124 IP1_43_D11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 582
Score = 355 bits (179), Expect = 5e-096
Identities = 224/239 (93%)
Strand = Plus / Plus
Query: 6 aggttcttctcagcaggttgagactcttcctaagtccagggtacccttacgaagaaatac 65
|||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aggtccttctcagcaggctgcgactcttcctaagtccagggtacccttacgaagaaatac 403
Query: 66 tgaggacattccacaaccaaaccgacaatgttatgtgctcatatctgcctctattcaatt 125
|||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||
Sbjct: 404 tgaggacattccacaaccaaactgacaacgttatgtgctcgtatttacctctattcaatt 463
Query: 126 cattcaacttcactaaaggaggactaatacaactcaaccatggaaggcctcagccacttc 185
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 464 cattcaacttcactaaaggaggattaatacaactcaaccatggaaggcctcaaccacttc 523
Query: 186 agtacgctgtcaacgcagctttccttgcttctctatacagcgactatcttgaagctgca 244
|||| |||||||| |||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 524 agtatgctgtcaatgcagctttccttgcttctttatacagtgattatcttgaagctgca 582
>gb|BG739401.1|BG739401 EM1_82_E02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 313
Score = 321 bits (162), Expect = 8e-086
Identities = 277/313 (88%), Gaps = 3/313 (0%)
Strand = Plus / Plus
Query: 579 cagcgaatgctggtctggttgcagcgctgatctctatatccgatatcaaaaccggacggt 638
|||| |||| |||| |||||||||| ||||| ||||||| ||||||||||| |||||||
Sbjct: 1 cagcaaatgttggtttggttgcagcactgatttctatatatgatatcaaaactggacggt 60
Query: 639 tcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacgcccccgc 698
||||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||||| |
Sbjct: 61 tcggcattgataagaacaccatgttctctgcaattcctccaatgttcccaacacccccac 120
Query: 699 cgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttccaaagca 758
| ||||||||||||||||||||||| |||| || |||||||||| |||| ||||||||
Sbjct: 121 caccgccatcagcatggaaaccataaagagacag-acctctgaatatttt--ccaaagca 177
Query: 759 tcgaacagggaagtggagcaaacgtgtgatcatttggtacagcgaaggccagagacagga 818
|| || ||||||||||||||||| | ||||||||||||||||| |||||||| ||||||
Sbjct: 178 tcaaatagggaagtggagcaaacatatgatcatttggtacagcaaaggccaggaacagga 237
Query: 819 aagctgacagcataagtttatagagcttctatttctgtatcaatatgacagatcagtata 878
|||| ||||||||||| ||||||||||| |||||||||| | |||||||||||||||||
Sbjct: 238 aagcggacagcataagcttatagagcttgtatttctgtacccgtatgacagatcagtata 297
Query: 879 agatcctctgtca 891
| |||||||||||
Sbjct: 298 aaatcctctgtca 310
>gb|AW564290.1|AW564290 LG1_289_B06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 254 bits (128), Expect = 1e-065
Identities = 155/164 (94%)
Strand = Plus / Plus
Query: 6 aggttcttctcagcaggttgagactcttcctaagtccagggtacccttacgaagaaatac 65
|||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aggtccttctcagcaggctgcgactcttcctaagtccagggtacccttacgaagaaatac 488
Query: 66 tgaggacattccacaaccaaaccgacaatgttatgtgctcatatctgcctctattcaatt 125
|||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||
Sbjct: 489 tgaggacattccacaaccaaactgacaacgttatgtgctcgtatttacctctattcaatt 548
Query: 126 cattcaacttcactaaaggaggactaatacaactcaaccatgga 169
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 549 cattcaacttcactaaaggaggattaatacaactcaaccatgga 592
>gb|BF421490.1|BF421490 FM1_8_D07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 153
Score = 125 bits (63), Expect = 9e-027
Identities = 127/146 (86%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 632 ggacggttcggcatcgataagaacaccatcttctctgcgattcctccgatgttcccaacg 691
|||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 2 ggacggttcggcattaataagaacaccatattatctgcaattcctccaatgttcccaaca 61
Query: 692 cccccgccgccgccatcagcatggaaaccatagagaggcaatacctctgaatgttttttc 751
||| | || ||||||||||||||||||||||| |||| | | ||||||||| | |||||
Sbjct: 62 ccctcaccaccgccatcagcatggaaaccataaagagac-agacctctgaa--tattttc 118
Query: 752 caaagcatcgaacagggaagtggagc 777
||||||||| || |||||||||||||
Sbjct: 119 caaagcatcaaatagggaagtggagc 144
>gb|CW022238.1|CW022238 104_161_10431724_1_30006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431724, DNA
sequence
Length = 702
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 61 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 120
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 121 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 180
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 181 ctccaagaaggcagaccc 198
>gb|CW164356.1|CW164356 104_572_11151945_148_36462_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151945, DNA
sequence
Length = 735
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Minus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 574 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 515
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 514 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 455
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 454 ctccaagaaggcagaccc 437
>gb|CW236952.1|CW236952 104_693_11215895_148_37519_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215895, DNA
sequence
Length = 667
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 58 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 117
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 118 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 177
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 178 ctccaagaaggcagaccc 195
>gb|CW388822.1|CW388822 fsbb001f073l23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073l23, DNA
sequence
Length = 581
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 93 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 152
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 153 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 212
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 213 ctccaagaaggcagaccc 230
>gb|BE357367.1|BE357367 DG1_148_A07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 90 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 149
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 150 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 209
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 210 ctccaagaaggcagaccc 227
>gb|CD205740.1|CD205740 HS1_18_E08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_18_E08_A012 3', mRNA sequence
Length = 601
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 6 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 65
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 66 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 125
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 126 ctccaagaaggcagaccc 143
>gb|CD220430.1|CD220430 CCC1_67_H06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_H06_A007 3', mRNA sequence
Length = 635
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 50 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 109
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 110 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 169
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 170 ctccaagaaggcagaccc 187
>gb|CX613114.1|CX613114 GABR1_6_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_G11_A002 3', mRNA sequence
Length = 683
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 109 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 168
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 169 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 228
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 229 ctccaagaaggcagaccc 246
>gb|CX617846.1|CX617846 GABR1_36_D11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_D11_A002 3', mRNA sequence
Length = 720
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 125 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 184
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 185 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 244
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 245 ctccaagaaggcagaccc 262
>gb|CX619537.1|CX619537 GABR1_46_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_46_D02_A002 3', mRNA sequence
Length = 708
Score = 67.9 bits (34), Expect = 2e-009
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 346 gaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagagg 405
||||||||||||||| || |||||||| || ||||||||| || || || ||| | ||
Sbjct: 114 gaagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtgg 173
Query: 406 cgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggga 465
|||||| | ||||||||||||||||||||| ||||| || || ||||||||| | ||
Sbjct: 174 cgcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgaga 233
Query: 466 cacaaagaaggcaaaccc 483
| | ||||||||| ||||
Sbjct: 234 ctccaagaaggcagaccc 251
>gb|CF071078.1|CF071078 FE1_15_D12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_D12_A002 3', mRNA sequence
Length = 707
Score = 65.9 bits (33), Expect = 7e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 347 aagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagaggc 406
|||||||||||||| || |||||||| || ||||||||| || || || ||| | |||
Sbjct: 114 aagatgagctacgtggttggtttcggcaaaaagtacccgcggcacctgcaccaccgtggc 173
Query: 407 gcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggagggac 466
||||| | ||||||||||||||||||||| ||||| || || ||||||||| | |||
Sbjct: 174 gcgtccacgcctcacaacggcgtcaagtattcgtgcaccggcggctacaagtggcgagac 233
Query: 467 acaaagaaggcaaaccc 483
| ||||||||| ||||
Sbjct: 234 tccaagaaggcagaccc 250
>gb|CW159691.1|CW159691 104_566_11149490_148_36423_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149490, DNA
sequence
Length = 659
Score = 61.9 bits (31), Expect = 1e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 434 tatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatcctt 493
||||| ||||||||||| | |||||||||||||| |||||| |||||||||| ||| |
Sbjct: 322 tatggttgcaaaggagggtggaagtggagggacaccaagaagccaaaccctaatatcata 263
Query: 494 gtcggagcaatggtggctggccc 516
|| || || ||||| ||||||||
Sbjct: 262 gtaggggccatggttgctggccc 240
>gb|CW163891.1|CW163891 104_571_11151698_116_36456_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151698, DNA
sequence
Length = 692
Score = 61.9 bits (31), Expect = 1e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 434 tatgggtgcaaaggaggttacaagtggagggacacaaagaaggcaaaccctaacatcctt 493
||||| ||||||||||| | |||||||||||||| |||||| |||||||||| ||| |
Sbjct: 279 tatggttgcaaaggagggtggaagtggagggacaccaagaagccaaaccctaatatcata 220
Query: 494 gtcggagcaatggtggctggccc 516
|| || || ||||| ||||||||
Sbjct: 219 gtaggggccatggttgctggccc 197
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 206 ttccttgcttctctatacagcgactatcttgaagctgcagacacgcctgggtggtactg 264
|||||||||||| | | ||| || |||||||| ||||| || || ||||||||||||||
Sbjct: 581 ttccttgcttctgtgttcagtgattatcttgaggctgcggatactcctgggtggtactg 523
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 312,800
Number of Sequences: 832831
Number of extensions: 312800
Number of successful extensions: 93453
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93249
Number of HSP's gapped (non-prelim): 130
length of query: 1078
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1058
effective length of database: 474,703,049
effective search space: 502235825842
effective search space used: 502235825842
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)