BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716450.2.1
(2214 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondri... 2575 0.0
gb|CN131219.1|CN131219 RHOH1_46_D03.g1_A002 Acid- and alkal... 1189 0.0
gb|CX607269.1|CX607269 ANR1_7_D04.g1_A002 Anaerobic roots S... 926 0.0
gb|CD204366.1|CD204366 HS1_7_D12.g1_A012 Heat-shocked seedl... 920 0.0
gb|CX613686.1|CX613686 GABR1_9_D03.g1_A002 GA- or brassinol... 914 0.0
gb|BM324944.1|BM324944 PIC1_37_H01.b1_A002 Pathogen-infecte... 878 0.0
gb|CD204341.1|CD204341 HS1_7_D12.b1_A012 Heat-shocked seedl... 858 0.0
gb|CX607177.1|CX607177 ANR1_7_D04.b1_A002 Anaerobic roots S... 837 0.0
gb|CF485163.1|CF485163 POL1_29_G03.g1_A002 Pollen Sorghum b... 809 0.0
gb|BM324286.1|BM324286 PIC1_26_E06.b1_A002 Pathogen-infecte... 765 0.0
gb|BM326464.1|BM326464 PIC1_57_D05.b1_A002 Pathogen-infecte... 753 0.0
gb|CD206090.1|CD206090 HS1_20_F12.g1_A012 Heat-shocked seed... 735 0.0
gb|AW680052.1|AW680052 WS1_3_H03.g1_A002 Water-stressed 1 (... 714 0.0
gb|BG487993.1|BG487993 RHIZ2_61_G10.g1_A003 Rhizome2 (RHIZ2... 706 0.0
gb|CD206066.1|CD206066 HS1_20_F12.b1_A012 Heat-shocked seed... 700 0.0
gb|BM331062.1|BM331062 PIC1_69_B05.g1_A002 Pathogen-infecte... 698 0.0
gb|CN123838.1|CN123838 RHOH1_1_C05.b1_A002 Acid- and alkali... 682 0.0
gb|BF704861.1|BF704861 FM1_52_D10.b1_A003 Floral-Induced Me... 676 0.0
gb|CD205469.1|CD205469 HS1_14_F10.b1_A012 Heat-shocked seed... 670 0.0
gb|CF771212.1|CF771212 DSBF1_15_F11.g1_A010 Drought-stresse... 668 0.0
gb|BM331189.1|BM331189 PIC1_70_G07.g1_A002 Pathogen-infecte... 664 0.0
gb|CD230790.1|CD230790 SS1_9_C10.g1_A012 Salt-stressed seed... 654 0.0
gb|CX613603.1|CX613603 GABR1_9_D03.b1_A002 GA- or brassinol... 638 0.0
gb|BM325708.1|BM325708 PIC1_47_G10.b1_A002 Pathogen-infecte... 583 e-164
gb|CF760090.1|CF760090 DSAF1_55_D06.b1_A011 Drought-stresse... 583 e-164
gb|BF656935.1|BF656935 OV2_22_H01.g1_A002 Ovary 2 (OV2) Sor... 579 e-163
gb|CD230773.1|CD230773 SS1_9_C10.b1_A012 Salt-stressed seed... 573 e-161
gb|CD204677.1|CD204677 HS1_9_F09.b1_A012 Heat-shocked seedl... 571 e-160
gb|CD208484.1|CD208484 HS1_38_A09.b1_A012 Heat-shocked seed... 567 e-159
gb|BG649225.1|BG649225 EM1_78_G08.g1_A002 Embryo 1 (EM1) So... 565 e-159
gb|BE601404.1|BE601404 PI1_92_E08.g1_A002 Pathogen induced ... 559 e-157
gb|CX619920.1|CX619920 GABR1_48_E06.g1_A002 GA- or brassino... 529 e-148
gb|CB926632.1|CB926632 ABA1_2_F04.g1_A012 Abscisic acid-tre... 525 e-147
gb|AW565936.1|AW565936 LG1_353_H05.g1_A002 Light Grown 1 (L... 519 e-145
gb|BG158200.1|BG158200 EM1_11_F03.g1_A002 Embryo 1 (EM1) So... 492 e-137
gb|BI139712.1|BI139712 IP1_48_B08.g1_A002 Immature pannicle... 492 e-137
gb|CF485078.1|CF485078 POL1_29_G03.b1_A002 Pollen Sorghum b... 478 e-132
gb|CD205491.1|CD205491 HS1_14_F10.g1_A012 Heat-shocked seed... 474 e-131
gb|BI139970.1|BI139970 IP1_48_B08.b1_A002 Immature pannicle... 466 e-129
gb|AW671959.1|AW671959 LG1_353_H05.b1_A002 Light Grown 1 (L... 464 e-128
gb|CD204700.1|CD204700 HS1_9_F09.g1_A012 Heat-shocked seedl... 460 e-127
gb|CD208571.1|CD208571 HS1_38_A09.g1_A012 Heat-shocked seed... 438 e-120
gb|CF758582.1|CF758582 DSAF1_34_A08.g1_A011 Drought-stresse... 434 e-119
gb|BG488291.1|BG488291 RHIZ2_61_G10.b1_A003 Rhizome2 (RHIZ2... 392 e-107
gb|AW677315.1|AW677315 DG1_5_B11.g1_A002 Dark Grown 1 (DG1)... 391 e-106
gb|BG649384.1|BG649384 EM1_78_G08.b1_A002 Embryo 1 (EM1) So... 389 e-106
gb|BG049685.1|BG049685 EM1_7_G02.g1_A002 Embryo 1 (EM1) Sor... 361 2e-097
gb|BG158298.1|BG158298 EM1_11_F03.b1_A002 Embryo 1 (EM1) So... 359 7e-097
gb|BE600896.1|BE600896 PI1_92_E08.b1_A002 Pathogen induced ... 321 2e-085
gb|BM327561.1|BM327561 PIC1_7_E11.g1_A002 Pathogen-infected... 301 1e-079
gb|BM328784.1|BM328784 PIC1_26_E06.g1_A002 Pathogen-infecte... 299 6e-079
gb|BG557118.1|BG557118 EM1_42_H01.g1_A002 Embryo 1 (EM1) So... 295 9e-078
gb|CF756891.1|CF756891 DSAF1_10_H06.g1_A011 Drought-stresse... 293 4e-077
gb|AW679042.1|AW679042 WS1_22_G09.b1_A002 Water-stressed 1 ... 291 1e-076
gb|CD228530.1|CD228530 CCC1_8_G01.b1_A007 Callus culture/ce... 285 9e-075
gb|CF428990.1|CF428990 PH1_19_F10.b1_A002 Phosphorous-defic... 281 1e-073
gb|BM322663.1|BM322663 PIC1_7_E11.b1_A002 Pathogen-infected... 280 5e-073
gb|CF771043.1|CF771043 DSBF1_13_B09.g1_A010 Drought-stresse... 278 2e-072
gb|BG557626.1|BG557626 EM1_54_C03.g1_A002 Embryo 1 (EM1) So... 276 8e-072
gb|BF656620.1|BF656620 FM1_52_D10.g1_A003 Floral-Induced Me... 274 3e-071
gb|BM330850.1|BM330850 PIC1_57_D05.g1_A002 Pathogen-infecte... 274 3e-071
gb|AW677145.1|AW677145 DG1_5_B11.b1_A002 Dark Grown 1 (DG1)... 268 2e-069
gb|CB926615.1|CB926615 ABA1_2_F05.g1_A012 Abscisic acid-tre... 266 8e-069
gb|BG464949.1|BG464949 EM1_36_F03.g1_A002 Embryo 1 (EM1) So... 262 1e-067
gb|BE597768.1|BE597768 PI1_65_A07.g1_A002 Pathogen induced ... 228 2e-057
gb|CD228648.1|CD228648 CCC1_8_G01.g1_A007 Callus culture/ce... 216 7e-054
gb|CF772109.1|CF772109 DSBF1_29_C11.g9_A010 Drought-stresse... 190 4e-046
gb|BI643574.1|BI643574 DG1_91_H10.g1_A002 Dark Grown 1 (DG1... 188 2e-045
gb|BE125651.1|BE125651 DG1_54_F08.b1_A002 Dark Grown 1 (DG1... 127 5e-027
gb|BG322573.1|BG322573 EM1_36_F03.b1_A002 Embryo 1 (EM1) So... 127 5e-027
gb|BZ336843.1|BZ336843 hz39e10.b1 WGS-SbicolorF (JM107 adap... 123 7e-026
gb|BG933326.1|BG933326 WS1_3_H03.b2_A002 Water-stressed 1 (... 123 7e-026
gb|BF657276.1|BF657276 OV2_22_H01.b1_A002 Ovary 2 (OV2) Sor... 119 1e-024
dbj|AB084897.1| Sorghum bicolor ALDH2a mRNA for mitochondri... 119 1e-024
gb|BG557345.1|BG557345 EM1_42_H01.b1_A002 Embryo 1 (EM1) So... 117 5e-024
gb|BE598048.1|BE598048 PI1_65_A07.b1_A002 Pathogen induced ... 115 2e-023
gb|CB926571.1|CB926571 ABA1_2_F04.b1_A012 Abscisic acid-tre... 105 2e-020
gb|BE356736.1|BE356736 DG1_12_H04.b1_A002 Dark Grown 1 (DG1... 100 1e-018
gb|BZ336844.1|BZ336844 hz39e10.g1 WGS-SbicolorF (JM107 adap... 94 7e-017
gb|DV162802.2|DV162802 P3-A17 Sorghum bicolor greenbug-resp... 90 1e-015
gb|CB925894.1|CB925894 ABA1_30_G05.b1_A012 Abscisic acid-tr... 84 6e-014
gb|CB926553.1|CB926553 ABA1_2_F05.b1_A012 Abscisic acid-tre... 84 6e-014
gb|CD205748.1|CD205748 HS1_18_E05.b1_A012 Heat-shocked seed... 84 6e-014
gb|CD205771.1|CD205771 HS1_18_E04.b1_A012 Heat-shocked seed... 84 6e-014
gb|CD210390.1|CD210390 HS1_51_G05.b1_A012 Heat-shocked seed... 84 6e-014
gb|DN551903.1|DN551903 pSPR-RT-MR-H1_F09_S174 pSPR Sorghum ... 84 6e-014
gb|BM330153.1|BM330153 PIC1_47_G10.g1_A002 Pathogen-infecte... 80 1e-012
gb|CW317755.1|CW317755 104_809_11473583_116_35861_086 Sorgh... 76 2e-011
gb|CW317757.1|CW317757 104_809_11473584_116_35862_086 Sorgh... 76 2e-011
gb|CW424062.1|CW424062 fsbb001f134d10f0 Sorghum methylation... 76 2e-011
gb|AW681193.1|AW681193 WS1_9_D05.g1_A002 Water-stressed 1 (... 76 2e-011
gb|AW922462.1|AW922462 DG1_19_G06.g1_A002 Dark Grown 1 (DG1... 76 2e-011
gb|BE356391.1|BE356391 DG1_124_E05.g1_A002 Dark Grown 1 (DG... 76 2e-011
gb|BE593873.1|BE593873 WS1_103_D07.g1_A002 Water-stressed 1... 76 2e-011
gb|BE594190.1|BE594190 WS1_103_D07.b1_A002 Water-stressed 1... 76 2e-011
gb|BE600332.1|BE600332 PI1_95_B04.g1_A002 Pathogen induced ... 76 2e-011
gb|BG049524.1|BG049524 EM1_5_B08.g1_A002 Embryo 1 (EM1) Sor... 76 2e-011
gb|BG556571.1|BG556571 EM1_38_H10.g1_A002 Embryo 1 (EM1) So... 76 2e-011
gb|CD204822.1|CD204822 HS1_10_F05.b1_A012 Heat-shocked seed... 76 2e-011
gb|CD224755.1|CD224755 CCC1_36_C01.b1_A007 Callus culture/c... 76 2e-011
gb|CD427393.1|CD427393 SA1_30_D09.b1_A002 Salicylic acid-tr... 76 2e-011
gb|CW035143.1|CW035143 104_265_10502987_114_30378 Sorghum m... 72 2e-010
gb|CW241628.1|CW241628 104_700_11218876_148_37543_002 Sorgh... 72 2e-010
gb|BE356776.1|BE356776 DG1_12_H04.g1_A002 Dark Grown 1 (DG1... 70 1e-009
gb|BE359607.1|BE359607 DG1_54_F08.g2_A002 Dark Grown 1 (DG1... 70 1e-009
gb|BE362316.1|BE362316 DG1_85_C07.g1_A002 Dark Grown 1 (DG1... 70 1e-009
gb|BG355625.1|BG355625 EM1_16_B06.g1_A002 Embryo 1 (EM1) So... 70 1e-009
gb|BZ368348.1|BZ368348 id12g11.b1 WGS-SbicolorF (JM107 adap... 68 4e-009
gb|DV162802.1|DV162802 P3-A17 Sorghum bicolor greenbug-resp... 66 2e-008
gb|CW241627.1|CW241627 104_700_11218876_116_37544_002 Sorgh... 58 4e-006
gb|CW478002.1|CW478002 fsbb001f235k06k0 Sorghum methylation... 58 4e-006
gb|BE125725.1|BE125725 DG1_54_F08.g1_A002 Dark Grown 1 (DG1... 56 1e-005
gb|CN136165.1|CN136165 OX1_41_E01.b1_A002 Oxidatively-stres... 56 1e-005
gb|CN136237.1|CN136237 OX1_41_E01.g1_A002 Oxidatively-stres... 56 1e-005
gb|BG558573.1|BG558573 RHIZ2_57_F01.g1_A003 Rhizome2 (RHIZ2... 54 6e-005
gb|BG466043.1|BG466043 RHIZ2_47_H06.g1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|CL162019.1|CL162019 104_354_10806128_114_31830_032 Sorgh... 50 9e-004
gb|CW478001.1|CW478001 fsbb001f235k06f0 Sorghum methylation... 50 9e-004
gb|BG355412.1|BG355412 EM1_16_B06.b1_A002 Embryo 1 (EM1) So... 50 9e-004
gb|CF429088.1|CF429088 PH1_19_F10.g1_A002 Phosphorous-defic... 48 0.004
gb|CN123925.1|CN123925 RHOH1_1_C05.g1_A002 Acid- and alkali... 48 0.004
gb|CD426142.1|CD426142 SA1_16_D09.g1_A002 Salicylic acid-tr... 46 0.014
gb|CW028938.1|CW028938 104_256_10499392_114_30399 Sorghum m... 42 0.22
gb|CW035144.1|CW035144 104_265_10502987_115_30379 Sorghum m... 42 0.22
gb|CW073489.1|CW073489 104_335_10779943_116_31364_343 Sorgh... 42 0.22
gb|CW171503.1|CW171503 104_582_11155778_148_36527_009 Sorgh... 42 0.22
gb|CW220834.1|CW220834 104_655_11197574_116_37455_053 Sorgh... 42 0.22
gb|CW424063.1|CW424063 fsbb001f134d10k0 Sorghum methylation... 42 0.22
gb|BG556813.1|BG556813 EM1_38_H10.b1_A002 Embryo 1 (EM1) So... 42 0.22
gb|CD426809.1|CD426809 SA1_25_H01.g1_A002 Salicylic acid-tr... 42 0.22
>dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial aldehyde dehydrogenase,
complete cds
Length = 2159
Score = 2575 bits (1299), Expect = 0.0
Identities = 1802/1964 (91%), Gaps = 38/1964 (1%)
Strand = Plus / Minus
Query: 36 ctaacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatc 92
|||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||
Sbjct: 2135 ctaacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatc 2076
Query: 93 aaaaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataa 152
|||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 2075 caaaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaa 2027
Query: 153 aacttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-t 209
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |
Sbjct: 2026 ggcttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgt 1971
Query: 210 tcttcatcgtcatctatctgattaacgccttcacattgttcgg--ggatgtgaccaggaa 267
|||||||||||||||| ||||||| |||||||| ||| || | |||||||| |||||
Sbjct: 1970 tcttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaa 1911
Query: 268 atgaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcg 327
|||||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||
Sbjct: 1910 atgaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcg 1851
Query: 328 ttcttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccc 387
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 1850 ttcttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccc 1791
Query: 388 ttctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacg 447
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 1790 ttctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatg 1731
Query: 448 tcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtg 507
||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1730 tcgaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtg 1671
Query: 508 tccaggctgttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttg 567
|||| ||| ||||||||||| || |||||||||||||| ||||||| |||||||||||
Sbjct: 1670 tccaagctattggtgaacacaccagcggccaatccatatgggctcgcatttgccctctta 1611
Query: 568 ataacctcattgaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcc 627
|||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1610 ataacctcattgagatccttgaacttgaggattgactgaacaggcccaaatatctcctcc 1551
Query: 628 tgagcaatcttcatgccgtcctggacatctgagaaaatcgttggctggatgtagaaaccc 687
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1550 tgagcaatcttcatgccatcctggacatctgagaaaatcgttggctggatgtagtaacct 1491
Query: 688 ttgtcacccaacctatcaccacccgtcacaagggtagctccaccgtcaacaccataccta 747
|| |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct: 1490 ttctcacccaacctatcaccacccgtcacaaggttagctccactgtcaacaccagaccta 1431
Query: 748 atgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacct 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 atgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacct 1371
Query: 808 ttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttggccttctccacaaac 867
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1370 ttcctgaatggatcaccaacgacgcgcttcaatgcacgagccttggctttctccacaaac 1311
Query: 868 tcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagcagcattgtccctgg 927
|||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||
Sbjct: 1310 tcatcataaacacgctcatgtacaaatgtgcgagatccagcacaacagcattgcccctgg 1251
Query: 928 ttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaacatcagcatcgtccatt 987
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1250 ttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaatgtcagcatcatccatg 1191
Query: 988 atgatgaaaggggacttgcctcctaactccagtgtcactgtcttaaggttgctctttgca 1047
||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1190 atgataaaaggagacttgcctcctaactccagtgtcactgtcttaaggttgctccttgca 1131
Query: 1048 gccaactcgagaataatttttccagtatcggtagatccagtaaatgcgatcttatcaaca 1107
|||||||| |||| || ||| || |||||||||||||| |||||||| | ||||||||||
Sbjct: 1130 gccaactcaagaacaactttgccggtatcggtagatcccgtaaatgcaagcttatcaaca 1071
Query: 1108 tccatgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacgttcaca 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1070 tccatgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacattcaca 1011
Query: 1168 acaccctcaggcagtccagcctcatgcaacaatttggagatatacaaagccgatagaggg 1227
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1010 acaccctcaggtagtccagcctcatgcaacagcttggagatatacaaagccgatagagga 951
Query: 1228 gtttgttcagcagtcttgagcacgagagtatttccacatgccaaagcagggccaactttc 1287
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 950 gtttgctcagcagtcttgagcacgagagtgtttccacatgccaaagcagggccaactttc 891
Query: 1288 caggcaaacatcagaagaggaaagttccatgggatgatctgacctgcaactccaattggc 1347
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 890 caggcaaacatcagaagagggaagttccatgggatgatctgacctgcaacaccgattggc 831
Query: 1348 tcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagcccatggatctta 1407
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 830 tcatgcaagatctgtacatggtgtgggccatcagctggcacaacgagcccatggatctta 771
Query: 1408 tcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttcaatctgggct 1467
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 770 tcagcccaaccagcatagtaacgcataagacgggccaccattggtacttcaatatgggct 711
Query: 1468 gcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcgtcattgtgc 1527
||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 710 gcttgctcatatggctttccgttgtcccacgtctccaaagcagcaagctcatcattgtgc 651
Query: 1528 ttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 1587
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttctcaatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 591
Query: 1588 ggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtcctct 1647
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 590 ggccatggcccttcatcaaaagccttgcgggcagcagctactgcacggttaatgtcctct 531
Query: 1648 gcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 1707
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gcatcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 471
Query: 1708 gtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcaca 1767
|||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 470 gtcttgccggatgcagcatcaacaaagttgccattaatgaggagctttgtatagttcact 411
Query: 1768 tggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggaca 1827
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tggactgagggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggacg 351
Query: 1828 cctggcaacagcctgtgcatcccatctgcaggcactgtcctgcgcggcgcagagggggca 1887
||||||||||| | | ||||||||||| | ||||||| ||||||||||| ||
Sbjct: 350 cctggcaacagtccgcgcatcccatct---------ggcctgcgcagcgcagaggggaca 300
Query: 1888 gcgggcggcgcgccgg---caggggccctcgccaggaggcagcgggagacgagcgaggac 1944
||||| |||||| ||| ||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 299 gcgggtggcgcggcgggggcagaggccctggccaagaggcagcgggagacgagcgaggac 240
Query: 1945 gcggccctccgagccatgcggg---aaatttattgcgcccgccg 1985
||||||||||||||||| | || |||||||||||||||||||
Sbjct: 239 gcggccctccgagccatcccgggcaaaatttattgcgcccgccg 196
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 139 gcgcagtaatggaagcggatatcctcct 112
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 52 gttggtgtgggagtgaggacgagtaa 27
>gb|CN131219.1|CN131219 RHOH1_46_D03.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_46_D03_A002 5', mRNA sequence
Length = 804
Score = 1189 bits (600), Expect = 0.0
Identities = 717/756 (94%)
Strand = Plus / Minus
Query: 619 atctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggctggatg 678
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 804 atctcctcctgagcaatcttcatgccatcctggacatctgagaaaatcgttggctggatg 745
Query: 679 tagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgtcaaca 738
||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 744 tagtaacctttctcacccaacctatcaccacccgtcacaaggttagctccactgtcaaca 685
Query: 739 ccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggccctgt 798
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccagacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggccctgt 625
Query: 799 tcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttggccttc 858
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 tcaacacctttcctgaatggatcaccaacgacgcgcttcaatgcacgagccttggctttc 565
Query: 859 tccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagcagcat 918
||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 564 tccacaaactcatcataaacacgctcatgtacaaatgtgcgagatccagcacaacagcat 505
Query: 919 tgtccctggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaacatcagca 978
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 tgcccctggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaatgtcagca 445
Query: 979 tcgtccattatgatgaaaggggacttgcctcctaactccagtgtcactgtcttaaggttg 1038
|| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatccatgatgataaaaggagacttgcctcctaactccagtgtcactgtcttaaggttg 385
Query: 1039 ctctttgcagccaactcgagaataatttttccagtatcggtagatccagtaaatgcgatc 1098
||| ||||||||||||| |||| || ||| || |||||||||||||| |||||||| | |
Sbjct: 384 ctccttgcagccaactcaagaacaactttgccggtatcggtagatcccgtaaatgcaagc 325
Query: 1099 ttatcaacatccatgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacg 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatcaacatccatgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacg 265
Query: 1159 acgttcacaacaccctcaggcagtccagcctcatgcaacaatttggagatatacaaagcc 1218
|| ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct: 264 acattcacaacaccctcaggtagtccagcctcatgcaacagcttggagatatgcaaagcc 205
Query: 1219 gatagaggggtttgttcagcagtcttgagcacgagagtatttccacatgccaaagcaggg 1278
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 gatagaggagtttgctcagcagtcttgagcacgagagtgtttccacatgccaaagcaggg 145
Query: 1279 ccaactttccaggcaaacatcagaagaggaaagttccatgggatgatctgacctgcaact 1338
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 144 ccaactttccaggcaaacatcagaagagggaagttccatgggatgatctgacctgcaaca 85
Query: 1339 ccaattggctcatgcaagatctgtacatggtgtggg 1374
|| |||||||||||||||||||||||||||||||||
Sbjct: 84 ccgattggctcatgcaagatctgtacatggtgtggg 49
>gb|CX607269.1|CX607269 ANR1_7_D04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_D04_A002 5', mRNA sequence
Length = 779
Score = 926 bits (467), Expect = 0.0
Identities = 611/659 (92%), Gaps = 15/659 (2%)
Strand = Plus / Minus
Query: 1333 gcaactccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatg 1392
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 779 gcaacaccgattggctcatgcaagatctgtacatggtgtgggccatcagctggcacaacg 720
Query: 1393 agcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgggt 1452
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 719 agcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccattggt 660
Query: 1453 acttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagca 1512
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 659 acttcaatatgggctgcttgctcatatggctttccgttgtcccacgtctccaaagcagca 600
Query: 1513 agctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctca 1572
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agctcatcattgtgcttctcaatcaaatcagcaaaccgcagtaggatacgggacctctca 540
Query: 1573 taggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactgca 1632
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 539 taggcagtcatcttcggccatggcccttcatcaaaagccttgcgggcagcagctactgca 480
Query: 1633 cggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgaggg 1692
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cggttaatgtcctctgcatcaccctcagccacatgagcaatcacctcccctgtacgaggg 420
Query: 1693 tccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggagc 1752
||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||
Sbjct: 419 tccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgaggagc 360
Query: 1753 tttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgctg 1812
||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttgtatagttcacttggactgagggcgtgatgggctcctctactgctgctgcagtgctg 300
Query: 1813 aacctctgaaggacacctggcaacagcctgtgcatcccatctgcaggcactgtcctgcgc 1872
|||||||||||||| ||||||||||| | | ||||||||||| | |||||||
Sbjct: 299 aacctctgaaggacgcctggcaacagtccgcgcatcccatct---------ggcctgcgc 249
Query: 1873 ggcgcagagggggcagcgggcggcgcgccgg---caggggccctcgccaggaggcagcgg 1929
||||||||||| ||||||| |||||| ||| ||| |||||| |||| ||||||||||
Sbjct: 248 agcgcagaggggacagcgggtggcgcggcgggggcagaggccctggccaagaggcagcgg 189
Query: 1930 gagacgagcgaggacgcggccctccgagccatgcggg---aaatttattgcgcccgccg 1985
|||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 188 gagacgagcgaggacgcggccctccgagccatcccgggcaaaatttattgcgcccgccg 130
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 73 gcgcagtaatggaagcggatatcctcct 46
>gb|CD204366.1|CD204366 HS1_7_D12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_D12_A012 5', mRNA sequence
Length = 696
Score = 920 bits (464), Expect = 0.0
Identities = 599/644 (93%), Gaps = 15/644 (2%)
Strand = Plus / Minus
Query: 1348 tcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagcccatggatctta 1407
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 696 tcatgcaagatctgtacatggtgtgggccatcagccggcacaacgagcccatggatctta 637
Query: 1408 tcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttcaatctgggct 1467
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 636 tcagcccaaccagcatagtaacgcataagacgggccaccattggtacttcaatatgggct 577
Query: 1468 gcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcgtcattgtgc 1527
||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 576 gcttgctcatatggctttccgttgtcccacgtctccaaagcagcaagctcatcattgtgc 517
Query: 1528 ttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 1587
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttctcaatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 457
Query: 1588 ggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtcctct 1647
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 456 ggccatggcccttcatcaaaagccttgcgggcagcagctactgcacggttaatgtcctct 397
Query: 1648 gcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 1707
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gcatcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 337
Query: 1708 gtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcaca 1767
|||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 336 gtcttgccggatgcagcatcaacaaagttgccattaatgaggagctttgtatagttcact 277
Query: 1768 tggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggaca 1827
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tggactgagggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggacg 217
Query: 1828 cctggcaacagcctgtgcatcccatctgcaggcactgtcctgcgcggcgcagagggggca 1887
||||||||||| | | ||||||||||| | ||||||| ||||||||||| ||
Sbjct: 216 cctggcaacagtccgcgcatcccatct---------ggcctgcgcagcgcagaggggaca 166
Query: 1888 gcgggcggcgcgccgg---caggggccctcgccaggaggcagcgggagacgagcgaggac 1944
||||| |||||| ||| ||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 165 gcgggtggcgcggcgggggcagaggccctggccaagaggcagcgggagacgagcgaggac 106
Query: 1945 gcggccctccgagccatgcggg---aaatttattgcgcccgccg 1985
||||||||||||||||| | || |||||||||||||||||||
Sbjct: 105 gcggccctccgagccatcccgggcaaaatttattgcgcccgccg 62
>gb|CX613686.1|CX613686 GABR1_9_D03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_D03_A002 5', mRNA sequence
Length = 794
Score = 914 bits (461), Expect = 0.0
Identities = 611/661 (92%), Gaps = 15/661 (2%)
Strand = Plus / Minus
Query: 1331 ctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaa 1390
||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 794 ctgcaacaccgattggctcatgcaagatctgtacatggtgtgggccatcagctggcacaa 735
Query: 1391 tgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgg 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 734 cgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccattg 675
Query: 1451 gtacttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcag 1510
|||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 674 gtacttcaatatgggctgcttgctcatatggctttccgttgtcccacgtctccaaagcag 615
Query: 1511 caagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctct 1570
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 614 caagctcatcattgtgcttctcaatcaaatcagcaaaccgcagtaggatacgggacctct 555
Query: 1571 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactg 1630
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 554 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgggcagcagctactg 495
Query: 1631 cacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgag 1690
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cacggttaatgtcctgtgcatcaccctcagccacatgagcaatcacctcccctgtacgag 435
Query: 1691 ggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgagga 1750
||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 434 ggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgagga 375
Query: 1751 gctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgc 1810
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 374 gctttgtatagttcacttggactgagggcgtgatgggctcctctactgctgctgcagtgc 315
Query: 1811 tgaacctctgaaggacacctggcaacagcctgtgcatcccatctgcaggcactgtcctgc 1870
||||||| |||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 314 tgaacctatgaaggacgcctggcaacagtccgcgcatcccatct---------ggcctgc 264
Query: 1871 gcggcgcagagggggcagcgggcggcgcgccgg---caggggccctcgccaggaggcagc 1927
|| ||||||||||| ||||||| |||||| ||| ||| |||||| |||| ||||||||
Sbjct: 263 gcagcgcagaggggacagcgggtggcgcggcgggggcagaggccctggccaagaggcagc 204
Query: 1928 gggagacgagcgaggacgcggccctccgagccatgcggg---aaatttattgcgcccgcc 1984
|||||||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 203 gggagacgagcgaggacgcggccctccgagccatcccgggcaaaatttattgcgcccgcc 144
Query: 1985 g 1985
|
Sbjct: 143 g 143
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 86 gcgcagtaatggaagcggatatcctcct 59
>gb|BM324944.1|BM324944 PIC1_37_H01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 527
Score = 878 bits (443), Expect = 0.0
Identities = 503/523 (96%)
Strand = Plus / Minus
Query: 1271 aagcagggccaactttccaggcaaacatcagaagaggaaagttccatgggatgatctgac 1330
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 527 aagcagggccaactttccaggcaaacatcagaagagggaagttccatgggatgatctgac 468
Query: 1331 ctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaa 1390
||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 467 ctgcaacaccgattggctcatgcaagatctgtacatggtgtgggccatcagctggcacaa 408
Query: 1391 tgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgg 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 cgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccattg 348
Query: 1451 gtacttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcag 1510
|||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 347 gtacttcaatatgggctgcttgctcatatggctttccgttgtcccacgtctccaaagcag 288
Query: 1511 caagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctct 1570
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 287 caagctcatcattgtgcttctcaatcaaatcagcaaaccgcagtaggatacgggacctct 228
Query: 1571 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactg 1630
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 227 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgggcagcagctactg 168
Query: 1631 cacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgag 1690
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cacggttaatgtcctctgcatcaccctcagccacatgagcaatcacctcccctgtacgag 108
Query: 1691 ggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgagga 1750
||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 107 ggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgagga 48
Query: 1751 gctttgtgtagttcacatggactgacggcgtgatgggctcctc 1793
||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 47 gctttgtatagttcacttggactgagggcgtgatgggctcctc 5
>gb|CD204341.1|CD204341 HS1_7_D12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_D12_A012 3', mRNA sequence
Length = 784
Score = 858 bits (433), Expect = 0.0
Identities = 653/722 (90%), Gaps = 12/722 (1%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 715 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 659
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 658 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 603
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 602 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 543
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 542 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 483
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 482 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 423
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 422 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 363
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 362 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 303
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 302 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 243
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 183
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaaccta 702
|| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 182 ccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcacccaaccta 123
Query: 703 tcaccacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatc 762
|||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 122 tcaccacccgtcacaaggttagctccactgtcaacaccagacctaatgtagcgcaagatc 63
Query: 763 ttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatca 822
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 ttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaatggatca 3
Query: 823 cc 824
||
Sbjct: 2 cc 1
>gb|CX607177.1|CX607177 ANR1_7_D04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_D04_A002 3', mRNA sequence
Length = 787
Score = 837 bits (422), Expect = 0.0
Identities = 639/707 (90%), Gaps = 12/707 (1%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 700 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 644
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 643 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 588
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 587 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 528
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 527 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 468
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 467 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 408
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 407 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 348
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 347 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 288
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 287 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 228
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 227 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 168
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaaccta 702
|| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 167 ccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcacccaaccta 108
Query: 703 tcaccacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatc 762
|||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 107 tcaccacccgtcacaaggttagctccactgtcaacaccagacctaatgtagcgcaagatc 48
Query: 763 ttgttgaattgctcgtcgtcaatctgcgggccctgttcaacaccttt 809
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ttgttgaattgctcgtcgtcaatctgcgggccctgttcaacaccttt 1
>gb|CF485163.1|CF485163 POL1_29_G03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_29_G03_A002 5', mRNA sequence
Length = 521
Score = 809 bits (408), Expect = 0.0
Identities = 492/520 (94%)
Strand = Plus / Minus
Query: 659 agaaaatcgttggctggatgtagaaacccttgtcacccaacctatcaccacccgtcacaa 718
||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 521 agaaaatcgttggctggatgtagtaacctttctcacccaacctatcaccacccgtcacaa 462
Query: 719 gggtagctccaccgtcaacaccatacctaatgtagcgcaagatcttgttgaattgctcgt 778
|| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggttagctccactgtcaacaccagacctaatgtagcgcaagatcttgttgaattgctcgt 402
Query: 779 cgtcaatctgcgggccctgttcaacacctttcctgaacggatcaccaacgacgcgcttca 838
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 401 cgtcaatctgcgggccctgttcaacacctttcctgaatggatcaccaacgacgcgcttca 342
Query: 839 atgcacgagccttggccttctccacaaactcatcataaacacgctcatgtacaaacgtgc 898
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 341 atgcacgagccttggctttctccacaaactcatcataaacacgctcatgtacaaatgtgc 282
Query: 899 gagatccagcgcagcagcattgtccctggttaaagaacagggcaaagtgcgcaagctcaa 958
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagatccagcacaacagcattgcccctggttaaagaacagggcaaagtgcgcaagctcaa 222
Query: 959 cagcatggtcaacatcagcatcgtccattatgatgaaaggggacttgcctcctaactcca 1018
|||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 221 cagcatggtcaatgtcagcatcatccatgatgataaaaggagacttgcctcctaactcca 162
Query: 1019 gtgtcactgtcttaaggttgctctttgcagccaactcgagaataatttttccagtatcgg 1078
||||||||||||||||||||||| ||||||||||||| |||| || ||| || |||||||
Sbjct: 161 gtgtcactgtcttaaggttgctccttgcagccaactcaagaacaactttgccggtatcgg 102
Query: 1079 tagatccagtaaatgcgatcttatcaacatccatgtgactagcaagagcagcaccagcag 1138
||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tagatcccgtaaatgcaagcttatcaacatccatgtgactagcaagagcagcaccagcag 42
Query: 1139 tagggccaaaaccagaaacgacgttcacaacaccctcagg 1178
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 41 tagggccaaaaccagaaacgacattcacaacaccctcagg 2
>gb|BM324286.1|BM324286 PIC1_26_E06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 507
Score = 765 bits (386), Expect = 0.0
Identities = 466/493 (94%)
Strand = Plus / Minus
Query: 706 ccacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatcttg 765
||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 507 ccacccgtcacaaggttagctccactgtcaacaccagacctaatgtagcgcaagatcttg 448
Query: 766 ttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatcacca 825
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 447 ttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcntgaatggatcacca 388
Query: 826 acgacgcgcttcaatgcacgagccttggccttctccacaaactcatcataaacacgctca 885
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 387 acgacgcgcttcaatgcacgagccttggctttctccacaaactcatcataaacacgctca 328
Query: 886 tgtacaaacgtgcgagatccagcgcagcagcattgtccctggttaaagaacagggcaaag 945
|||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 327 tgtacaaatgtgcgagatccagcacaacagcattgcccctggttaaagaacagggcaaag 268
Query: 946 tgcgcaagctcaacagcatggtcaacatcagcatcgtccattatgatgaaaggggacttg 1005
||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 267 tgcgcaagctcaacagcatggtcaatgtcagcatcatccatgatgataaaaggagacttg 208
Query: 1006 cctcctaactccagtgtcactgtcttaaggttgctctttgcagccaactcgagaataatt 1065
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || |
Sbjct: 207 cctcctaactccagtgtcactgtcttaaggttgctccttgcagccaactcaagaacaact 148
Query: 1066 tttccagtatcggtagatccagtaaatgcgatcttatcaacatccatgtgactagcaaga 1125
|| || |||||||||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 147 ttgccggtatcggtagatcccgtaaatgcaagcttatcaacatccatgtgactagcaaga 88
Query: 1126 gcagcaccagcagtagggccaaaaccagaaacgacgttcacaacaccctcaggcagtcca 1185
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 87 gcagcaccagcagtagggccaaaaccagaaacgacattcacaacaccctcaggtagtcca 28
Query: 1186 gcctcatgcaaca 1198
|||||||||||||
Sbjct: 27 gcctcatgcaaca 15
>gb|BM326464.1|BM326464 PIC1_57_D05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 512
Score = 753 bits (380), Expect = 0.0
Identities = 470/500 (94%)
Strand = Plus / Minus
Query: 400 atgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttc 459
|||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 508 atgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagtta 449
Query: 460 acccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttg 519
| |||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| |||
Sbjct: 448 atccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattg 389
Query: 520 gtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattg 579
|||||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||
Sbjct: 388 gtgaacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattg 329
Query: 580 aggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttc 639
|| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 328 agatccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttc 269
Query: 640 atgccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaac 699
||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 268 atgccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcacccaac 209
Query: 700 ctatcaccacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaag 759
||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||
Sbjct: 208 ctatcaccacccgtcacaaggttagctccactgtcaacaccagacctaatgtagcgcaag 149
Query: 760 atcttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacgga 819
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 148 atcttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaatgga 89
Query: 820 tcaccaacgacgcgcttcaatgcacgagccttggccttctccacaaactcatcataaaca 879
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 88 tcaccaacgacgcgcttcaatgcacgagccttggctttctccacaaactcatcataaaca 29
Query: 880 cgctcatgtacaaacgtgcg 899
|||||||||||||| |||||
Sbjct: 28 cgctcatgtacaaatgtgcg 9
>gb|CD206090.1|CD206090 HS1_20_F12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_20_F12_A012 5', mRNA sequence
Length = 781
Score = 735 bits (371), Expect = 0.0
Identities = 508/554 (91%), Gaps = 15/554 (2%)
Strand = Plus / Minus
Query: 1438 cgggccaccatgggtacttcaatctgggctgcttgctcatatggcttcccgttgtcccat 1497
||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 741 cgggccaccattggtacttcaatatgggctgcttgctcatatggctntccgttgtcccac 682
Query: 1498 gtctccaaagcagcaagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtagg 1557
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 681 gtctccaaagcagcaagctcatcattgtgcttctcaatcaaatcagcgaaccgcagtagg 622
Query: 1558 atacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcga 1617
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcgg 562
Query: 1618 gccgcagctactgcacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacc 1677
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gcagcagctactgcacggttaatgtcctctgcatcaccctcagccacatgagcaatcacc 502
Query: 1678 tcccctgtacgagggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttc 1737
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 501 tcccctgtacgagggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttg 442
Query: 1738 ccattaatgaggagctttgtgtagttcacatggactgacggcgtgatgggctcctctact 1797
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 441 ccattaatgaggagctttgtatagttcacttggactgagggcgtgatgggctcctctact 382
Query: 1798 gctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtgcatcccatctgca 1857
||||||||||||||||||||||||||||| ||||||||||| | | |||||||||||
Sbjct: 381 gctgctgcagtgctgaacctctgaaggacgcctggcaacagtccgcgcatcccatct--- 325
Query: 1858 ggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg---caggggccctc 1914
| ||||||| ||||||||||| ||||||| |||||| ||| ||| ||||||
Sbjct: 324 ------ggcctgcgcagcgcagaggggacagcgggtggcgcggcgggggcagaggccctg 271
Query: 1915 gccaggaggcagcgggagacgagcgaggacgcggccctccgagccatgcggg---aaatt 1971
|||| |||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 270 gccaagaggcagcgggagacgagcgaggacgcggccctccgagccatcccgggcaaaatt 211
Query: 1972 tattgcgcccgccg 1985
||||||||||||||
Sbjct: 210 tattgcgcccgccg 197
Score = 91.7 bits (46), Expect = 3e-016
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 749 tgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggcc 794
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggcc 736
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 140 gcgcagtaatggaagcggatatcctcct 113
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 53 gttggtgtgggagtgaggacgagtaa 28
>gb|AW680052.1|AW680052 WS1_3_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 701
Score = 714 bits (360), Expect = 0.0
Identities = 629/713 (88%), Gaps = 23/713 (3%)
Strand = Plus / Minus
Query: 36 ctaacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatc 92
|||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||
Sbjct: 698 ctaacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatc 639
Query: 93 aaaaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataa 152
|||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 638 caaaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaa 590
Query: 153 aacttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-t 209
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |
Sbjct: 589 ggcttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgt 534
Query: 210 tcttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaa 267
|||||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||
Sbjct: 533 tcttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaa 474
Query: 268 atgaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcg 327
|||||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||
Sbjct: 473 atgaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcg 414
Query: 328 ttcttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccc 387
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 413 ttcttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccc 354
Query: 388 ttctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacg 447
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 353 ttctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatg 294
Query: 448 tcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtg 507
||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 293 tcgaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtg 234
Query: 508 tccaggctgttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttg 567
|||| ||| ||||||||||| || |||||||||||||| ||||||| |||||||||||
Sbjct: 233 tccaagctattggtgaacacaccagcggccaatccatatgggctcgcatttgccctctta 174
Query: 568 ataacctcattgaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcc 627
|||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 173 ataacctcattgagatccttgaacttgaggattgactgaacaggcccaaatatctcctcc 114
Query: 628 tgagcaatcttcatgccgtcctggacatctgagaaaatcgttggctggatgtagaaaccc 687
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 113 tgagcaatcttcatgccatcctggacatctgagaaaatcgttggctggatgtagtaacct 54
Query: 688 ttgtcacccaacctatcaccacccgtcacaagggtagctccaccgtcaacacc 740
|| |||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 53 ttctcacccaacctatcaccacccgtcacaaggttagctccactgtcaacacc 1
>gb|BG487993.1|BG487993 RHIZ2_61_G10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 673
Score = 706 bits (356), Expect = 0.0
Identities = 610/689 (88%), Gaps = 23/689 (3%)
Strand = Plus / Minus
Query: 38 aacaaatgcattttcataatgaactctgcata-tccgttgctagaacagtcttatcaaaa 96
|||||||| |||||||||||||||||||| | |||||||||| || |||||||||||||
Sbjct: 673 aacaaatgtgttttcataatgaactctgcaaaatccgttgctacaatagtcttatcaaaa 614
Query: 97 agaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataaaact 156
||||| ||||| ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 613 agaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggct 565
Query: 157 tattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-ttctt 213
||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |||||
Sbjct: 564 tattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgttctt 509
Query: 214 catcgtcatctatctgattaacgccttcacatt---gttcggggatgtgaccaggaaatg 270
||||||| |||| ||||||| |||||||| ||| ||||||| |||||| ||||||||
Sbjct: 508 catcgtcgtctaactgattatcgccttcatattattgttcggg-atgtgatgaggaaatg 450
Query: 271 aatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttc 330
||||| ||| ||||| | || ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 449 aatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcgttc 390
Query: 331 ttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttc 390
||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 389 ttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttc 330
Query: 391 tccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcg 450
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 329 tccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcg 270
Query: 451 aagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtcc 510
|||||||| | |||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 269 aagcagttaatccagacagtcccagccctgagcgcacgcgtcagggtgttggccgtgtcc 210
Query: 511 aggctgttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgata 570
| ||| ||||||||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 209 aagctattggtgaacacaccagcggccaatccatatgggctcgcatttgccctcttgata 150
Query: 571 acctcattgaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcctga 630
||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 149 acctcattgagatccttgaacttgaggattgactgaacaggcccaaatatctcctcctgg 90
Query: 631 gcaatcttcatgccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttg 690
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 89 gcaatcttcatgccatcctggacatctgagaaaatcgttggctggatgtagtaacctttc 30
Query: 691 tcacccaacctatcaccacccgtcacaag 719
|||||||||||||||||||||||||||||
Sbjct: 29 tcacccaacctatcaccacccgtcacaag 1
>gb|CD206066.1|CD206066 HS1_20_F12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_F12_A012 3', mRNA sequence
Length = 703
Score = 700 bits (353), Expect = 0.0
Identities = 570/638 (89%), Gaps = 12/638 (1%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 631 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 575
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 574 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 519
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 518 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 459
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 458 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 399
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 398 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 339
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 338 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 279
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 278 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 219
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 218 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 159
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 99
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaaccta 702
|| |||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 98 ccatcctggacatgtgagaaaatcgttggctggatgtagtaacctttctcacccaaccta 39
Query: 703 tcaccacccgtcacaagggtagctccaccgtcaacacc 740
|||||||||||||||||| ||||||||| |||||||||
Sbjct: 38 tcaccacccgtcacaaggttagctccactgtcaacacc 1
>gb|BM331062.1|BM331062 PIC1_69_B05.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 580
Score = 698 bits (352), Expect = 0.0
Identities = 515/567 (90%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 184 agggcaaatcttattatagttgttc-ttcttcatcgtcatctatctgattaacgccttca 242
||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 567 agggcaaatcttattatagctgttcgttcttcatcgtcatctaactgattatcgccttca 508
Query: 243 cattgt--tcggggatgtgaccaggaaatgaatatacgtggttctcgtgcacaaggccac 300
||| | | ||||||||| ||||||||||||| ||| ||||| | || |||||||
Sbjct: 507 tattattgtgcgggatgtgatgaggaaatgaatatccgtagttcttatccagaaggccat 448
Query: 301 acttgcagcgtctacaaccacgcggcgttcttgattggggtgacgaccgccttcacctgc 360
||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 447 acttgcagcatctacaaccacgcggcgttcttgataggggtgacgactgccttcacttgc 388
Query: 361 aggtagttcttcaggctgtcaacgcccttctccctcccgatgccgctcatcttgtaccca 420
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 387 aggtagttcttcaggctgtcaatgcccttctccctcccaatgccgctcatcttgtaccca 328
Query: 421 ccaaacggaatcgcagcatcgaagacgtcgaagcagttcacccagacggtcccggccctg 480
||||| ||||| ||||||||||||| |||||||||||| | |||||||||||| ||||||
Sbjct: 327 ccaaagggaattgcagcatcgaagatgtcgaagcagttaatccagacggtcccagccctg 268
Query: 481 agcgcgcgcgtcagggtgttggccgtgtccaggctgttggtgaacacgccggcggccaat 540
||||| ||||||||||||||||| ||||||| ||| ||||||||||| || |||||||||
Sbjct: 267 agcgcacgcgtcagggtgttggctgtgtccaagctattggtgaacacaccagcggccaat 208
Query: 541 ccatactggctcgcgtttgccctcttgataacctcattgaggtctttgaacttgaggatc 600
||||| ||||||| ||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 207 ccatatgggctcgcatttgccctcttaataacctcattgagatccttgaacttgaggatt 148
Query: 601 gactgcacaggcccaaatatctcctcctgagcaatcttcatgccgtcctggacatctgag 660
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 147 gactgaacaggcccaaatatctcctcctgagcaatcttcatgccatcctggacatctgag 88
Query: 661 aaaatcgttggctggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagg 720
||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 87 aaaatcgttggctggatgtagtaacctttctcacccaacctatcaccacccgtcacaagg 28
Query: 721 gtagctccaccgtcaacaccataccta 747
||||||||| |||||||||| |||||
Sbjct: 27 ttagctccactgtcaacaccagaccta 1
>gb|CN123838.1|CN123838 RHOH1_1_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_C05_A002 3', mRNA sequence
Length = 690
Score = 682 bits (344), Expect = 0.0
Identities = 558/625 (89%), Gaps = 12/625 (1%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 618 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 562
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 561 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 506
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 505 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 446
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 445 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 386
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 385 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 326
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 325 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 266
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 265 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 206
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 205 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 146
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 145 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagtaatcttcatg 86
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaaccta 702
|| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 85 ccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcacccaaccta 26
Query: 703 tcaccacccgtcacaagggtagctc 727
|||||||||||||||||| ||||||
Sbjct: 25 tcaccacccgtcacaaggttagctc 1
>gb|BF704861.1|BF704861 FM1_52_D10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 460
Score = 676 bits (341), Expect = 0.0
Identities = 425/453 (93%)
Strand = Plus / Minus
Query: 812 tgaacggatcaccaacgacgcgcttcaatgcacgagccttggccttctccacaaactcat 871
|||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 460 tgaatggatcaccaacgacacgcttcaatgcacgagccttggctttctccacaaactcat 401
Query: 872 cataaacacgctcatgtacaaacgtgcgagatccagcgcagcagcattgtccctggttaa 931
|||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 400 cataaacacgctcatgtacaaatgtgcgagatccagcacaacagcattgcccctggttaa 341
Query: 932 agaacagggcaaagtgcgcaagctcaacagcatggtcaacatcagcatcgtccattatga 991
||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 340 agaacagggcaaagtgcgcaagctcaacagcatggtcaatgtcagcatcatccatgatga 281
Query: 992 tgaaaggggacttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagcca 1051
| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 280 taaaaggagacttgcctcctaactccagtgtcactgtcttaaggttgctccttgcagcca 221
Query: 1052 actcgagaataatttttccagtatcggtagatccagtaaatgcgatcttatcaacatcca 1111
|||| |||| |||||| || |||||||||||||| |||||||| | ||||||||||||||
Sbjct: 220 actcaagaacaattttgccggtatcggtagatcccgtaaatgcaagcttatcaacatcca 161
Query: 1112 tgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacgttcacaacac 1171
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 160 tgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacattcacaacac 101
Query: 1172 cctcaggcagtccagcctcatgcaacaatttggagatatacaaagccgatagaggggttt 1231
||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 100 cctcaggtagtccagcctcatgcaacagcttggagatatacaaagccgatagaggagttt 41
Query: 1232 gttcagcagtcttgagcacgagagtatttccac 1264
| ||||||||||||||||||||||| |||||||
Sbjct: 40 gctcagcagtcttgagcacgagagtgtttccac 8
>gb|CD205469.1|CD205469 HS1_14_F10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_14_F10_A012 3', mRNA sequence
Length = 670
Score = 670 bits (338), Expect = 0.0
Identities = 548/612 (89%), Gaps = 12/612 (1%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 605 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 549
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 548 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 493
Query: 225 atctgattaacgccttcacattgtt-cg-gggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| || || ||||||||| ||||||||||||| ||| ||
Sbjct: 492 aactgattatcgccttcatattattgcgcgggatgtgatgaggaaatgaatatccgtagt 433
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 432 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 373
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 372 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 313
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| || |||||||||| |||||||||||| | |
Sbjct: 312 ccgctcatcttgtacccaccaaagggaattgcggcatcgaagatgtcgaagcagttaatc 253
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 252 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 193
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 192 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 133
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 132 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 73
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaaccta 702
|| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 72 ccatcctggacatctgagaaaatcgttggctggatgtagtaacctttctcacccaaccta 13
Query: 703 tcaccacccgtc 714
||||||||||||
Sbjct: 12 tcaccacccgtc 1
>gb|CF771212.1|CF771212 DSBF1_15_F11.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_15_F11_A010 3', mRNA sequence
Length = 667
Score = 668 bits (337), Expect = 0.0
Identities = 600/682 (87%), Gaps = 23/682 (3%)
Strand = Plus / Minus
Query: 38 aacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatcaa 94
|||||||| |||||||||||||||||||| | |||||||||| || | |||||||| |
Sbjct: 667 aacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatcca 608
Query: 95 aaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataaaa 154
||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 607 aaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaagg 559
Query: 155 cttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-ttc 211
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |||
Sbjct: 558 cttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgttc 503
Query: 212 ttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaaat 269
|||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||||
Sbjct: 502 ttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaaat 443
Query: 270 gaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgtt 329
|||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||||
Sbjct: 442 gaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcgtt 383
Query: 330 cttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccctt 389
|||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 382 cttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccctt 323
Query: 390 ctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtc 449
||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||
Sbjct: 322 ctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtc 263
Query: 450 gaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtc 509
||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 262 gaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtc 203
Query: 510 caggctgttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgat 569
|| ||| ||||||||||| || |||||||||||||| ||||||| ||||||||||| ||
Sbjct: 202 caagctattggtgaacacaccagcggccaatccatatgggctcgcatttgccctcttaat 143
Query: 570 aacctcattgaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcctg 629
|||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 142 aacctcattgagatccttgaacttgaggattgactgaacaggcccaaatatctcctcctg 83
Query: 630 agcaatcttcatgccgtcctggacatctgagaaaatcgttggctggatgtagaaaccctt 689
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 82 agcaatcttcatgccatcctggacatctgagaaaatcgttggctggatgtagtaaccttt 23
Query: 690 gtcacccaacctatcaccaccc 711
|||||||||||||||||||||
Sbjct: 22 ctcacccaacctatcaccaccc 1
>gb|BM331189.1|BM331189 PIC1_70_G07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 554
Score = 664 bits (335), Expect = 0.0
Identities = 489/538 (90%), Gaps = 3/538 (0%)
Strand = Plus / Minus
Query: 184 agggcaaatcttattatagttgttc-ttcttcatcgtcatctatctgattaacgccttca 242
||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 541 agggcaaatcttattatagctgttcgttcttcatcgtcatctaactgattatcgccttca 482
Query: 243 cattgt--tcggggatgtgaccaggaaatgaatatacgtggttctcgtgcacaaggccac 300
||| | | ||||||||| ||||||||||||| ||| ||||| | || |||||||
Sbjct: 481 tattattgtgcgggatgtgatgaggaaatgaatatccgtagttcttatccagaaggccat 422
Query: 301 acttgcagcgtctacaaccacgcggcgttcttgattggggtgacgaccgccttcacctgc 360
||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 421 acttgcagcatctacaaccacgcggcgttcttgataggggtgacgactgccttcacttgc 362
Query: 361 aggtagttcttcaggctgtcaacgcccttctccctcccgatgccgctcatcttgtaccca 420
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 361 aggtagttcttcaggctgtcaatgcccttctccctcccaatgccgctcatcttgtaccca 302
Query: 421 ccaaacggaatcgcagcatcgaagacgtcgaagcagttcacccagacggtcccggccctg 480
||||| ||||| ||||||||||||| |||||||||||| | |||||||||||| ||||||
Sbjct: 301 ccaaagggaattgcagcatcgaagatgtcgaagcagttaatccagacggtcccagccctg 242
Query: 481 agcgcgcgcgtcagggtgttggccgtgtccaggctgttggtgaacacgccggcggccaat 540
||||| ||||||||||||||||| ||||||| ||| ||||||||||| || |||||||||
Sbjct: 241 agcgcacgcgtcagggtgttggctgtgtccaagctattggtgaacacaccagcggccaat 182
Query: 541 ccatactggctcgcgtttgccctcttgataacctcattgaggtctttgaacttgaggatc 600
||||| ||||||| ||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 181 ccatatgggctcgcatttgccctcttaataacctcattgagatccttgaacttgaggatt 122
Query: 601 gactgcacaggcccaaatatctcctcctgagcaatcttcatgccgtcctggacatctgag 660
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gactgaacaggcccaaatatctcctcctgagcaatcttcatgccatcctggacatctgag 62
Query: 661 aaaatcgttggctggatgtagaaacccttgtcacccaacctatcaccacccgtcacaa 718
||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 61 aaaatcgttggctggatgtagtaacctttctcacccaacctatcaccacccgtcacaa 4
>gb|CD230790.1|CD230790 SS1_9_C10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_9_C10_A012 5', mRNA sequence
Length = 692
Score = 654 bits (330), Expect = 0.0
Identities = 460/502 (91%), Gaps = 16/502 (3%)
Strand = Plus / Minus
Query: 1491 gtcccatgtctccaaa-gcagcaagctcgtcattgtgcttctctatcaaatcagcaaacc 1549
|||||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 692 gtcccacgtctccaaaagcagcaagctcatcattgtgcttctcaatcaaatcagcaaacc 633
Query: 1550 gcagtaggatacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaag 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcagtaggatacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaag 573
Query: 1610 ccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcagccacatgag 1669
||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 572 ccttgcgggcagcagctactgcacggttaatgtcctctgcatcaccctcagccacatgag 513
Query: 1670 caatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcggaatcaa 1729
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 512 caatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcagcatcaa 453
Query: 1730 caaagttcccattaatgaggagctttgtgtagttcacatggactgacggcgtgatgggct 1789
||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 452 caaagttgccattaatgaggagctttgtatagttcacttggactgagggcgtgatgggct 393
Query: 1790 cctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtgcatcc 1849
||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||
Sbjct: 392 cctctactgctgctgcagtgctgaacctctgaaggacgcctggcaacagtccgcgcatcc 333
Query: 1850 catctgcaggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg---cag 1906
||||| | ||||||| ||||||||||| ||||||| |||||| ||| |||
Sbjct: 332 catct---------ggcctgcgcagcgcagaggggacagcgggtggcgcggcgggggcag 282
Query: 1907 gggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgagccatgcggg 1966
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 281 aggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgagccatcccgg 222
Query: 1967 ---aaatttattgcgcccgccg 1985
|||||||||||||||||||
Sbjct: 221 gcaaaatttattgcgcccgccg 200
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 143 gcgcagtaatggaagcggatatcctcct 116
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 56 gttggtgtgggagtgaggacgagtaa 31
>gb|CX613603.1|CX613603 GABR1_9_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_D03_A002 3', mRNA sequence
Length = 652
Score = 638 bits (322), Expect = 0.0
Identities = 533/599 (88%), Gaps = 12/599 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 592 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 536
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 535 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 480
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 479 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 420
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 419 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 360
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 359 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 300
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 299 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 240
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 239 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 180
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 179 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 120
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 119 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 60
Query: 643 ccgtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacct 701
|| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 59 ccatcctggacatctgagaaaatcgttggctggatgtaataacctttctcacccaacct 1
>gb|BM325708.1|BM325708 PIC1_47_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 607
Score = 583 bits (294), Expect = e-164
Identities = 495/558 (88%), Gaps = 12/558 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 559 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 503
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | |||||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 502 taactgacaaccaa----agggcaaatcttatnatagctgttcgttcttcatcgtcatct 447
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 446 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 387
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 386 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 327
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 326 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 267
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 266 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 207
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 206 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 147
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 146 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 87
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 86 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 27
Query: 643 ccgtcctggacatctgag 660
|| |||||||||||||||
Sbjct: 26 ccatcctggacatctgag 9
>gb|CF760090.1|CF760090 DSAF1_55_D06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_55_D06_A011 5', mRNA sequence
Length = 406
Score = 583 bits (294), Expect = e-164
Identities = 378/406 (93%)
Strand = Plus / Minus
Query: 422 caaacggaatcgcagcatcgaagacgtcgaagcagttcacccagacggtcccggccctga 481
|||| ||||| ||||||||||||| |||||||||||| | |||||||||||| |||||||
Sbjct: 406 caaagggaattgcagcatcgaagatgtcgaagcagttaatccagacggtcccagccctga 347
Query: 482 gcgcgcgcgtcagggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatc 541
|||| ||||||||||||||||| ||||||| ||| ||||||||||| || ||||||||||
Sbjct: 346 gcgcacgcgtcagggtgttggctgtgtccaagctattggtgaacacaccagcggccaatc 287
Query: 542 catactggctcgcgtttgccctcttgataacctcattgaggtctttgaacttgaggatcg 601
|||| ||||||| ||||||||||| |||||||||||||| || |||||||||||||| |
Sbjct: 286 catatgggctcgcatttgccctcttaataacctcattgagatccttgaacttgaggattg 227
Query: 602 actgcacaggcccaaatatctcctcctgagcaatcttcatgccgtcctggacatctgaga 661
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 226 actgaacaggcccaaatatctcctcctgagcaatcttcatgccatcctggacatctgaga 167
Query: 662 aaatcgttggctggatgtagaaacccttgtcacccaacctatcaccacccgtcacaaggg 721
|||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||
Sbjct: 166 aaatcgttggctggatgtagtaacctttctcacccaacctatcaccacccgtcacaaggt 107
Query: 722 tagctccaccgtcaacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgt 781
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tagctccactgtcaacaccagacctaatgtagcgcaagatcttgttgaattgctcgtcgt 47
Query: 782 caatctgcgggccctgttcaacacctttcctgaacggatcaccaac 827
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 46 caatctgcgggccctgttcaacacctttcctgaatggatcaccaac 1
>gb|BF656935.1|BF656935 OV2_22_H01.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 579 bits (292), Expect = e-163
Identities = 494/557 (88%), Gaps = 12/557 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 550 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 494
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 493 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 438
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 437 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 378
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 377 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 318
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 317 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 258
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 257 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 198
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 197 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 138
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 137 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 78
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 77 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcgatcttcatg 18
Query: 643 ccgtcctggacatctga 659
|| ||||||||||||||
Sbjct: 17 ccatcctggacatctga 1
>gb|CD230773.1|CD230773 SS1_9_C10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_9_C10_A012 3', mRNA sequence
Length = 616
Score = 573 bits (289), Expect = e-161
Identities = 491/554 (88%), Gaps = 12/554 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 547 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 491
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 490 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 435
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 434 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 375
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 374 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 315
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 314 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 255
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 254 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 195
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 194 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 135
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||| ||||||||||
Sbjct: 134 aacacaccagcggccaatccatatgggctcgcatttgccctcttaatagcctcattgaga 75
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 74 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 15
Query: 643 ccgtcctggacatc 656
|| |||||||||||
Sbjct: 14 ccatcctggacatc 1
>gb|CD204677.1|CD204677 HS1_9_F09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_9_F09_A012 3', mRNA sequence
Length = 611
Score = 571 bits (288), Expect = e-160
Identities = 487/549 (88%), Gaps = 12/549 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 542 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 486
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 485 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 430
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 429 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 370
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 369 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 310
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 309 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 250
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 249 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 190
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 189 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 130
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 129 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 70
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 69 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 10
Query: 643 ccgtcctgg 651
|| ||||||
Sbjct: 9 ccatcctgg 1
>gb|CD208484.1|CD208484 HS1_38_A09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_38_A09_A012 3', mRNA sequence
Length = 604
Score = 567 bits (286), Expect = e-159
Identities = 485/547 (88%), Gaps = 12/547 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 540 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 484
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 483 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 428
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 427 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 368
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 367 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 308
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 307 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 248
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 247 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 188
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 187 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 128
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 127 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 68
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 67 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 8
Query: 643 ccgtcct 649
|| ||||
Sbjct: 7 ccatcct 1
>gb|BG649225.1|BG649225 EM1_78_G08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 565 bits (285), Expect = e-159
Identities = 481/542 (88%), Gaps = 12/542 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 538 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 482
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 481 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 426
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 425 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 366
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 365 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 306
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 305 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 246
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 245 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 186
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 185 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 126
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 125 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 66
Query: 583 tctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatg 642
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 65 tccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatcttcatg 6
Query: 643 cc 644
||
Sbjct: 5 cc 4
>gb|BE601404.1|BE601404 PI1_92_E08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 559 bits (282), Expect = e-157
Identities = 490/555 (88%), Gaps = 12/555 (2%)
Strand = Plus / Minus
Query: 102 caaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttatta 161
||||| |||| || ||| |||||||||||||||| ||||||||||| || |||||||
Sbjct: 548 caaaagaaaaaggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttatta 492
Query: 162 gagata--actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcg 218
|||||| ||||| |||| | ||||||||||||||||||| ||||| ||||||||||
Sbjct: 491 gagatataactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcg 436
Query: 219 tcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatata 276
||||||| ||||||| |||||||| ||| | | ||||||||| |||||||||||||
Sbjct: 435 tcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatc 376
Query: 277 cgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgatt 336
||| ||||| | || ||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 375 cgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcgttattgata 316
Query: 337 ggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctc 396
||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 315 ggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctc 256
Query: 397 ccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcag 456
|| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 255 ccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcag 196
Query: 457 ttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctg 516
|| | |||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 195 ttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagcta 136
Query: 517 ttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctca 576
||||||||||| || |||||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 135 ttggtgaacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctca 76
Query: 577 ttgaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatc 636
||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 75 ttgagatccttgaacttgaggattgactgaacaggcccaaatatctcctcctgagcaatc 16
Query: 637 ttcatgccgtcctgg 651
|||||||| ||||||
Sbjct: 15 ttcatgccatcctgg 1
>gb|CX619920.1|CX619920 GABR1_48_E06.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_48_E06_A002 5', mRNA sequence
Length = 625
Score = 529 bits (267), Expect = e-148
Identities = 393/435 (90%), Gaps = 15/435 (3%)
Strand = Plus / Minus
Query: 1557 gatacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcg 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatacgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcg 566
Query: 1617 agccgcagctactgcacggttaatgtcctctgcgtcaccctcagccacatgagcaatcac 1676
|| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 ggcagcagctactgcacccttaatgtcctctgcatcaccctcagccacatgagcaatcac 506
Query: 1677 ctcccctgtacgagggtccagagttgggaaggtcttgccggatgcggaatcaacaaagtt 1736
|||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 505 ctcccctgtacgagggtccagagtccggaaggtcttgccggatgcagcatcaacaaagtt 446
Query: 1737 cccattaatgaggagctttgtgtagttcacatggactgacggcgtgatgggctcctctac 1796
|||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 445 gccattaatgaggagctttgtatagttcacttggactgagggcgtgatgggctcctctac 386
Query: 1797 tgctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtgcatcccatctgc 1856
|||||||||||||||||||||||||||||| ||||||||||| | | |||||||||||
Sbjct: 385 tgctgctgcagtgctgaacctctgaaggacgcctggcaacagtccgcgcatcccatct-- 328
Query: 1857 aggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg---caggggccct 1913
| ||||||| ||||||||||| ||||||| |||||| ||| ||| ||||||
Sbjct: 327 -------ggcctgcgcagcgcagaggggacagcgggtggcgcggcgggggcagaggccct 275
Query: 1914 cgccaggaggcagcgggagacgagcgaggacgcggccctccgagccatgcggg---aaat 1970
|||| |||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 274 ggccaagaggcagcgggagacgagcgaggacgcggccctccgagccatcccgggcaaaat 215
Query: 1971 ttattgcgcccgccg 1985
|||||||||||||||
Sbjct: 214 ttattgcgcccgccg 200
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 143 gcgcagtaatggaagcggatatcctcct 116
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 56 gttggtgtgggagtgaggacgagtaa 31
>gb|CB926632.1|CB926632 ABA1_2_F04.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_2_F04_A012 5', mRNA sequence
Length = 626
Score = 525 bits (265), Expect = e-147
Identities = 382/421 (90%), Gaps = 15/421 (3%)
Strand = Plus / Minus
Query: 1571 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactg 1630
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 626 cataggcagtcatcttcggccatggcccttcatcaaaagccttgcgggcagcagctactg 567
Query: 1631 cacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgag 1690
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cacggttaatgtcctctgcatcaccctcagccacatgagcaatcacctcccctgtacgag 507
Query: 1691 ggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgagga 1750
||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 506 ggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgaggg 447
Query: 1751 gctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgc 1810
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 446 gctttgtatagttcacttggactgagggcgtgatgggctcctctactgctgctgcagtgc 387
Query: 1811 tgaacctctgaaggacacctggcaacagcctgtgcatcccatctgcaggcactgtcctgc 1870
|||||||||||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 386 tgaacctctgaaggacgcctggcaacagtccgcgcatcccatct---------ggcctgc 336
Query: 1871 gcggcgcagagggggcagcgggcggcgcgccgg---caggggccctcgccaggaggcagc 1927
|| ||||||||||| ||||||| |||||| ||| ||| |||||| |||| ||||||||
Sbjct: 335 gcagcgcagaggggacagcgggtggcgcggcgggggcagaggccctggccaagaggcagc 276
Query: 1928 gggagacgagcgaggacgcggccctccgagccatgcggg---aaatttattgcgcccgcc 1984
|||||||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 275 gggagacgagcgaggacgcggccctccgagccatcccgggcaaaatttattgcgcccgcc 216
Query: 1985 g 1985
|
Sbjct: 215 g 215
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 158 gcgcagtaatggaagcggatatcctcct 131
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 71 gttggtgtgggagtgaggacgagtaa 46
>gb|AW565936.1|AW565936 LG1_353_H05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 519 bits (262), Expect = e-145
Identities = 461/523 (88%), Gaps = 12/523 (2%)
Strand = Plus / Minus
Query: 103 aaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattag 162
|||| ||||||| ||| |||||||||||||||| ||||||||||| || ||||||||
Sbjct: 516 aaaaaaaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattag 460
Query: 163 agata--actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgt 219
||||| ||||| |||| | ||||||||||||||||||| ||||| |||||||||||
Sbjct: 459 agatataactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgt 404
Query: 220 catctatctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatac 277
|||||| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| |
Sbjct: 403 catctaactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatcc 344
Query: 278 gtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattg 337
|| ||||| | || ||||||| ||||||||| ||||||||||||||||||||||||| |
Sbjct: 343 gtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgatag 284
Query: 338 gggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcc 397
|||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 283 gggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcc 224
Query: 398 cgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagt 457
| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||
Sbjct: 223 caatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagt 164
Query: 458 tcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgt 517
| | |||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| |
Sbjct: 163 taatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctat 104
Query: 518 tggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcat 577
|||||||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||
Sbjct: 103 tggtgaacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcat 44
Query: 578 tgaggtctttgaacttgaggatcgactgcacaggcccaaatat 620
|||| || |||||||||||||| ||||| ||||||||||||||
Sbjct: 43 tgagatccttgaacttgaggattgactgaacaggcccaaatat 1
>gb|BG158200.1|BG158200 EM1_11_F03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 492 bits (248), Expect = e-137
Identities = 438/497 (88%), Gaps = 12/497 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 492 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 436
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 435 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 380
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 379 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 320
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 319 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 260
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 259 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 200
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 199 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 140
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 139 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 80
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 79 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 20
Query: 583 tctttgaacttgaggat 599
|| ||||||||||||||
Sbjct: 19 tccttgaacttgaggat 3
>gb|BI139712.1|BI139712 IP1_48_B08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 492 bits (248), Expect = e-137
Identities = 438/497 (88%), Gaps = 12/497 (2%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 494 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 438
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 437 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 382
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 381 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 322
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 321 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 262
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 261 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 202
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 201 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 142
Query: 463 cagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtg 522
||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 141 cagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtccaagctattggtg 82
Query: 523 aacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgagg 582
||||| || |||||||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 81 aacacaccagcggccaatccatatgggctcgcatttgccctcttaataacctcattgaga 22
Query: 583 tctttgaacttgaggat 599
|| ||||||||||||||
Sbjct: 21 tccttgaacttgaggat 5
>gb|CF485078.1|CF485078 POL1_29_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_29_G03_A002 3', mRNA sequence
Length = 542
Score = 478 bits (241), Expect = e-132
Identities = 480/554 (86%), Gaps = 23/554 (4%)
Strand = Plus / Minus
Query: 36 ctaacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatc 92
|||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||
Sbjct: 539 ctaacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatc 480
Query: 93 aaaaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataa 152
|||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 479 caaaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaa 431
Query: 153 aacttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-t 209
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |
Sbjct: 430 ggcttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgt 375
Query: 210 tcttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaa 267
|||||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||
Sbjct: 374 tcttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaa 315
Query: 268 atgaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcg 327
|||||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||
Sbjct: 314 atgaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcg 255
Query: 328 ttcttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccc 387
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 254 ttcttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccc 195
Query: 388 ttctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacg 447
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 194 ttctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatg 135
Query: 448 tcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtg 507
||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 134 tcgaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtg 75
Query: 508 tccaggctgttggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttg 567
|||| ||| ||||||||||| || |||||||||||||| ||||||| |||||||||||
Sbjct: 74 tccaagctattggtgaacacaccagcggccaatccatatgggctcgcatttgccctctta 15
Query: 568 ataacctcattgag 581
||||||||||||||
Sbjct: 14 ataacctcattgag 1
>gb|CD205491.1|CD205491 HS1_14_F10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_14_F10_A012 5', mRNA sequence
Length = 591
Score = 474 bits (239), Expect = e-131
Identities = 353/391 (90%), Gaps = 15/391 (3%)
Strand = Plus / Minus
Query: 1601 catcaaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcag 1660
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 591 catcaaaagccttgcgggcagcagctactgcacggttaatgtcctctgcatcaccctcag 532
Query: 1661 ccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatg 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatg 472
Query: 1721 cggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcg 1780
| | |||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 471 cagcatcaacaaagttgccattaatgaggagctttgtatagttcacttggactgagggcg 412
Query: 1781 tgatgggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcc 1840
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 411 tgatgggctcctctactgctgctgcagtgctgaacctctgaaggacgcctggcaacagtc 352
Query: 1841 tgtgcatcccatctgcaggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgc 1900
| ||||||||||| | ||||||| ||||||||||| ||||||| ||||||
Sbjct: 351 cgcgcatcccatct---------ggcctgcgcagcgcagaggggacagcgggtggcgcgg 301
Query: 1901 cgg---caggggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgag 1957
||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgggggcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgag 241
Query: 1958 ccatgcggg---aaatttattgcgcccgccg 1985
|||| | || |||||||||||||||||||
Sbjct: 240 ccatcccgggcaaaatttattgcgcccgccg 210
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 153 gcgcagtaatggaagcggatatcctcct 126
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 66 gttggtgtgggagtgaggacgagtaa 41
>gb|BI139970.1|BI139970 IP1_48_B08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 466 bits (235), Expect = e-129
Identities = 349/387 (90%), Gaps = 15/387 (3%)
Strand = Plus / Minus
Query: 1605 aaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcagccac 1664
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 483 aaaagccttgcgggcagcagctactgcacggttaatgtcctctgcatcaccctcagccac 424
Query: 1665 atgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcgga 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 423 atgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcagc 364
Query: 1725 atcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcgtgat 1784
|||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 363 atcaacaaagttgccattaatgaggagctttgtatagttcacttggactgagggcgtgat 304
Query: 1785 gggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtg 1844
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | |
Sbjct: 303 gggctcctctactgctgctgcagtgctgaacctctgaaggacgcctggcaacagtccgcg 244
Query: 1845 catcccatctgcaggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg- 1903
|||||||||| | ||||||| ||||||||||| ||||||| |||||| |||
Sbjct: 243 catcccatct---------ggcctgcgcagcgcagaggggacagcgggtggcgcggcggg 193
Query: 1904 --caggggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgagccat 1961
||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgagccat 133
Query: 1962 gcggg---aaatttattgcgcccgccg 1985
| || |||||||||||||||||||
Sbjct: 132 cccgggcaaaatttattgcgcccgccg 106
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 49 gcgcagtaatggaagcggatatcctcct 22
>gb|AW671959.1|AW671959 LG1_353_H05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 464 bits (234), Expect = e-128
Identities = 348/386 (90%), Gaps = 15/386 (3%)
Strand = Plus / Minus
Query: 1606 aaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcagccaca 1665
||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 526 aaagccttgcgggcagcagctactgcacggttaatgtcctctgcatcaccctcagccaca 467
Query: 1666 tgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcggaa 1725
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 466 tgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcagca 407
Query: 1726 tcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcgtgatg 1785
||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 406 tcaacaaagttgccattaatgaggagctttgtatagttcacttggactgagggcgtgatg 347
Query: 1786 ggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtgc 1845
||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||
Sbjct: 346 ggctcctctactgctgctgcagtgctgaacctctgaaggacgcctggcaacagtccgcgc 287
Query: 1846 atcccatctgcaggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg-- 1903
||||||||| | ||||||| ||||||||||| ||||||| |||||| |||
Sbjct: 286 atcccatct---------ggcctgcgcagcgcagaggggacagcgggtggcgcggcgggg 236
Query: 1904 -caggggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgagccatg 1962
||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgagccatc 176
Query: 1963 cggg---aaatttattgcgcccgccg 1985
| || |||||||||||||||||||
Sbjct: 175 ccgggcaaaatttattgcgcccgccg 150
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 93 gcgcagtaatggaagcggatatcctcct 66
>gb|CD204700.1|CD204700 HS1_9_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_9_F09_A012 5', mRNA sequence
Length = 687
Score = 460 bits (232), Expect = e-127
Identities = 351/391 (89%), Gaps = 15/391 (3%)
Strand = Plus / Minus
Query: 1601 catcaaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcag 1660
|||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 687 catcaaaagccttgcgggcagcagctactgcacggttaatgtcctntgcatcaccctcag 628
Query: 1661 ccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatg 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatg 568
Query: 1721 cggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcg 1780
| | |||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 567 cagcatcaacaaagttgccattaatgaggagctttgtatagttcacttggactgagggcg 508
Query: 1781 tgatgggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcc 1840
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 507 tgatgggctcctctactgctgctgcagtgctgaacctctgaaggacgcctggcaacagtc 448
Query: 1841 tgtgcatcccatctgcaggcactgtcctgcgcggcgcagagggggcagcgggcggcgcgc 1900
| ||||||||||| | ||||||| ||||||||||| ||||||| ||||||
Sbjct: 447 cgcgcatcccatct---------ggcctgcgcagcgcagaggggacagcgggtggcgcgg 397
Query: 1901 cgg---caggggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgag 1957
||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cgggggcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgag 337
Query: 1958 ccatgcggg---aaatttattgcgcccgccg 1985
|||| | || || ||||||||||||||||
Sbjct: 336 ccatcccgggcaaagtttattgcgcccgccg 306
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 249 gcgcagtaatggaagcggatatcctcct 222
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 162 gttggtgtgggagtgaggacgagtaa 137
>gb|CD208571.1|CD208571 HS1_38_A09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_38_A09_A012 5', mRNA sequence
Length = 567
Score = 438 bits (221), Expect = e-120
Identities = 332/369 (89%), Gaps = 15/369 (4%)
Strand = Plus / Minus
Query: 1623 agctactgcacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccc 1682
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 567 agctactgcacggttaatgtcctctgcatcaccctcagccacatgagcaatcacctcccc 508
Query: 1683 tgtacgagggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccatt 1742
||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 507 tgtacgagggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccatt 448
Query: 1743 aatgaggagctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgc 1802
||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 447 aatgaggagctttgtatagttcacttggactgagggcgtgatgggctcctctactgctgc 388
Query: 1803 tgcagtgctgaacctctgaaggacacctggcaacagcctgtgcatcccatctgcaggcac 1862
|||||||||||||||||||||||| ||||||||||| | | |||||||||||
Sbjct: 387 tgcagtgctgaacctctgaaggacgcctggcaacagtccgcgcatcccatct-------- 336
Query: 1863 tgtcctgcgcggcgcagagggggcagcgggcggcgcgccgg---caggggccctcgccag 1919
| ||||||| ||||||||||| ||||||| |||||| ||| ||| | |||| ||||
Sbjct: 335 -ggcctgcgcagcgcagaggggacagcgggtggcgcggcgggggcagagaccctggccaa 277
Query: 1920 gaggcagcgggagacgagcgaggacgcggccctccgagccatgcggg---aaatttattg 1976
|||||||||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct: 276 gaggcagcgggagacgagcgaggacgcggccctccgagccatcccgggcaaaatttattg 217
Query: 1977 cgcccgccg 1985
|||||||||
Sbjct: 216 cgcccgccg 208
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 151 gcgcagtaatggaagcggatatcctcct 124
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 64 gttggtgtgggagtgaggacgagtaa 39
>gb|CF758582.1|CF758582 DSAF1_34_A08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_34_A08_A011 3', mRNA sequence
Length = 507
Score = 434 bits (219), Expect = e-119
Identities = 446/516 (86%), Gaps = 23/516 (4%)
Strand = Plus / Minus
Query: 38 aacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatcaa 94
|||||||| |||||||||||||||||||| | |||||||||| || | |||||||| |
Sbjct: 507 aacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatcca 448
Query: 95 aaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataaaa 154
||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 447 aaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaagg 399
Query: 155 cttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-ttc 211
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |||
Sbjct: 398 cttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgttc 343
Query: 212 ttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaaat 269
|||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||||
Sbjct: 342 ttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaaat 283
Query: 270 gaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgtt 329
|||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||||
Sbjct: 282 gaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcgtt 223
Query: 330 cttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccctt 389
|||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 222 cttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccctt 163
Query: 390 ctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtc 449
||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||
Sbjct: 162 ctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtc 103
Query: 450 gaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtc 509
||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 102 gaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttggctgtgtc 43
Query: 510 caggctgttggtgaacacgccggcggccaatccata 545
|| ||| ||||||||||| || ||||||||||||||
Sbjct: 42 caagctattggtgaacacaccagcggccaatccata 7
>gb|BG488291.1|BG488291 RHIZ2_61_G10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 532
Score = 392 bits (198), Expect = e-107
Identities = 237/250 (94%)
Strand = Plus / Minus
Query: 1606 aaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcagccaca 1665
||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 532 aaagccttgcgggcagcagctactgcacggttaatgtcctctgcatcaccctcagccaca 473
Query: 1666 tgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcggaa 1725
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 472 tgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgcggca 413
Query: 1726 tcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcgtgatg 1785
||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 412 tcaacaaagttgccattaatgaggagctttgtatagttcacttggactgagggcgtgatg 353
Query: 1786 ggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaacagcctgtgc 1845
||||||||||||||||||||||||||||||||||||||||| || |||||||| | | ||
Sbjct: 352 ggctcctctactgctgctgcagtgctgaacctctgaaggacgcccggcaacagtccgcgc 293
Query: 1846 atcccatctg 1855
||||||||||
Sbjct: 292 atcccatctg 283
Score = 105 bits (53), Expect = 2e-020
Identities = 79/87 (90%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 1902 ggcaggggccctcgccaggaggcagcgggagacgagcgaggacgcggccctccgagccat 1961
||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ggcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccctccgagccat 174
Query: 1962 gcggg---aaatttattgcgcccgccg 1985
| || |||||||||||||||||||
Sbjct: 173 cccgggcaaaatttattgcgcccgccg 147
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 99 gcgcagtaatggaagcggatatcctcct 72
>gb|AW677315.1|AW677315 DG1_5_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 462
Score = 391 bits (197), Expect = e-106
Identities = 409/474 (86%), Gaps = 23/474 (4%)
Strand = Plus / Minus
Query: 36 ctaacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatc 92
|||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||
Sbjct: 459 ctaacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatc 400
Query: 93 aaaaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataa 152
|||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 399 caaaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaa 351
Query: 153 aacttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-t 209
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |
Sbjct: 350 ggcttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgt 295
Query: 210 tcttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaa 267
|||||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||
Sbjct: 294 tcttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaa 235
Query: 268 atgaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcg 327
|||||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||
Sbjct: 234 atgaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcg 175
Query: 328 ttcttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccc 387
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 174 ttcttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccc 115
Query: 388 ttctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacg 447
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 114 ttctccctcccaatgccgctcatcttgtacccaccaaagggaattgcagcatcgaagatg 55
Query: 448 tcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtcagggtgttg 501
||||||||||| | |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 54 tcgaagcagttaatccagacggtcccagccctgagcgcacgcgtcagggtgttg 1
>gb|BG649384.1|BG649384 EM1_78_G08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 507
Score = 389 bits (196), Expect = e-106
Identities = 301/336 (89%), Gaps = 15/336 (4%)
Strand = Plus / Minus
Query: 1656 ctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgcc 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgcc 448
Query: 1716 ggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactga 1775
|||||| | |||||||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 447 ggatgcagcatcaacaaagttgccattaatgaggagctttgtatagttcacttggactga 388
Query: 1776 cggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggacacctggcaa 1835
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 gggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaaggacgcctggcaa 328
Query: 1836 cagcctgtgcatcccatctgcaggcactgtcctgcgcggcgcagagggggcagcgggcgg 1895
||| | | ||||||||||| | ||||||| ||||||||||| ||||||| ||
Sbjct: 327 cagtccgcgcatcccatct---------ggcctgcgcagcgcagaggggacagcgggtgg 277
Query: 1896 cgcgccgg---caggggccctcgccaggaggcagcgggagacgagcgaggacgcggccct 1952
|||| ||| ||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 276 cgcggcgggggcagaggccctggccaagaggcagcgggagacgagcgaggacgcggccct 217
Query: 1953 ccgagccatgcggg---aaatttattgcgcccgccg 1985
||||||||| | || |||||||||||||||||||
Sbjct: 216 ccgagccatcccgggcaaaatttattgcgcccgccg 181
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 124 gcgcagtaatggaagcggatatcctcct 97
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 37 gttggtgtgggagtgaggacgagtaa 12
>gb|BG049685.1|BG049685 EM1_7_G02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 442
Score = 361 bits (182), Expect = 2e-097
Identities = 336/383 (87%), Gaps = 12/383 (3%)
Strand = Plus / Minus
Query: 108 aaaagggagcaaccaaattgcacaatatataggcaccaaccataaaacttattagagata 167
||||||| ||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 380 aaaagggtgcagccaaattgcacaatat---ggcaccaaccaaaaggcttattagagata 324
Query: 168 --actgagaacccaggctagggcaaatcttattatagttgttc-ttcttcatcgtcatct 224
||||| |||| | ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 323 taactgacaaccaa----agggcaaatcttattatagctgttcgttcttcatcgtcatct 268
Query: 225 atctgattaacgccttcacattgt--tcggggatgtgaccaggaaatgaatatacgtggt 282
| ||||||| |||||||| ||| | | ||||||||| ||||||||||||| ||| ||
Sbjct: 267 aactgattatcgccttcatattattgtgcgggatgtgatgaggaaatgaatatccgtagt 208
Query: 283 tctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcgttcttgattggggtg 342
||| | || ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 207 tcttatccagaaggccatacttgcagcatctacaaccacgcggcgttcttgataggggtg 148
Query: 343 acgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatg 402
||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 147 acgactgccttcacttgcaggtagttcttcaggctgtcaatgcccttctccctcccaatg 88
Query: 403 ccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacc 462
||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| | |
Sbjct: 87 ccgctcatcttgtacccaccaaagggaattgcagcatcgaagatgtcgaagcagttaatc 28
Query: 463 cagacggtcccggccctgagcgc 485
||||||||||| |||||||||||
Sbjct: 27 cagacggtcccagccctgagcgc 5
>gb|BG158298.1|BG158298 EM1_11_F03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 450
Score = 359 bits (181), Expect = 7e-097
Identities = 214/225 (95%)
Strand = Plus / Minus
Query: 1631 cacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgag 1690
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cacggttaatgtcctctgcatcaccctcagccacatgagcaatcacctcccctgtacgag 391
Query: 1691 ggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgagga 1750
||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 390 ggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgagga 331
Query: 1751 gctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgc 1810
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 330 gctttgtatagttcacttggactgagggcgtgatgggctcctctactgctgctgcagtgc 271
Query: 1811 tgaacctctgaaggacacctggcaacagcctgtgcatcccatctg 1855
|||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 270 tgaacctctgaaggacgcctggcaacagtccgcgcatcccatctg 226
>gb|BE600896.1|BE600896 PI1_92_E08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 489
Score = 321 bits (162), Expect = 2e-085
Identities = 267/302 (88%), Gaps = 15/302 (4%)
Strand = Plus / Minus
Query: 1690 gggtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgagg 1749
|||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 489 gggtccagagttgggaaggtcttgccggatgcagcatcaacaaagttgccattaatgagg 430
Query: 1750 agctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtg 1809
|||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 429 agctttgtatagttcacttggactgagggcgtgatgggctcctctactgctgctgcagtg 370
Query: 1810 ctgaacctctgaaggacacctggcaacagcctgtgcatcccatctgcaggcactgtcctg 1869
||||||||||||||||| ||||||||||| | | ||||||||||| | ||||
Sbjct: 369 ctgaacctctgaaggacgcctggcaacagtccgcgcatcccatct---------ggcctg 319
Query: 1870 cgcggcgcagagggggcagcgggcggcgcgccgg---caggggccctcgccaggaggcag 1926
||| ||||||||||| ||||||| |||||| ||| ||| |||||| |||| |||||||
Sbjct: 318 cgcagcgcagaggggacagcgggtggcgcggcgggggcagaggccctggccaagaggcag 259
Query: 1927 cgggagacgagcgaggacgcggccctccgagccatgcggg---aaatttattgcgcccgc 1983
||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 258 cgggagacgagcgaggacgcggccctccgagccatcccgggcaaaatttattgcgcccgc 199
Query: 1984 cg 1985
||
Sbjct: 198 cg 197
Score = 48.1 bits (24), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 2028 gcgcagtaatggaagcggatgtcctcct 2055
|||||||||||||||||||| |||||||
Sbjct: 140 gcgcagtaatggaagcggatatcctcct 113
Score = 44.1 bits (22), Expect = 0.055
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2117 gttggtgtgggagtgaggaccagtaa 2142
|||||||||||||||||||| |||||
Sbjct: 53 gttggtgtgggagtgaggacgagtaa 28
>gb|BM327561.1|BM327561 PIC1_7_E11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 415
Score = 301 bits (152), Expect = 1e-079
Identities = 349/409 (85%), Gaps = 23/409 (5%)
Strand = Plus / Minus
Query: 36 ctaacaaatgcattttcataatgaactctgcata-tccgttgctagaaca--gtcttatc 92
|||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||
Sbjct: 394 ctaacaaatgttttttcataatgaactctgcaaaatccgttgctacaatatagtcttatc 335
Query: 93 aaaaagaaacaaaataaaagggagcaaccaaattgcacaatatataggcaccaaccataa 152
|||||||| ||||| ||| |||||||||||||||| ||||||||||| ||
Sbjct: 334 caaaagaaa--------aagggtgcagccaaattgcacaatat---ggcaccaaccaaaa 286
Query: 153 aacttattagagata--actgagaacccaggctagggcaaatcttattatagttgttc-t 209
||||||||||||| ||||| |||| | ||||||||||||||||||| ||||| |
Sbjct: 285 ggcttattagagatataactgacaaccaa----agggcaaatcttattatagctgttcgt 230
Query: 210 tcttcatcgtcatctatctgattaacgccttcacattgt--tcggggatgtgaccaggaa 267
|||||||||||||||| ||||||| |||||||| ||| | | ||||||||| |||||
Sbjct: 229 tcttcatcgtcatctaactgattatcgccttcatattattgtgcgggatgtgatgaggaa 170
Query: 268 atgaatatacgtggttctcgtgcacaaggccacacttgcagcgtctacaaccacgcggcg 327
|||||||| ||| ||||| | || ||||||| ||||||||| |||||||||||||||||
Sbjct: 169 atgaatatccgtagttcttatccagaaggccatacttgcagcatctacaaccacgcggcg 110
Query: 328 ttcttgattggggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgccc 387
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 109 ttcttgataggggtgacgactgccttcacttgcaggtagttcttcaggctgtcaatgccc 50
Query: 388 ttctccctcccgatgccgctcatcttgtacccaccaaacggaatcgcag 436
||||||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 49 ttctccctcccaatgccgctcatcttgtacccaccaaagggaattgcag 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 592,901
Number of Sequences: 832831
Number of extensions: 592901
Number of successful extensions: 163822
Number of sequences better than 0.5: 130
Number of HSP's better than 0.5 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163239
Number of HSP's gapped (non-prelim): 407
length of query: 2214
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2194
effective length of database: 474,703,049
effective search space: 1041498489506
effective search space used: 1041498489506
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)