BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Y13733
(1516 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA 1021 0.0
ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-... 1021 0.0
dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA... 1013 0.0
dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA... 1013 0.0
dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA... 928 0.0
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 634 e-179
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 634 e-179
dbj|AP003990.3| Oryza sativa (japonica cultivar-group) geno... 634 e-179
tpg|BK003969.1| TPA: Oryza sativa (japonica cultivar-group)... 634 e-179
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 634 e-179
gb|AACV01003516.1| Oryza sativa (japonica cultivar-group) c... 620 e-175
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 620 e-175
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 620 e-175
gb|AU094574.1|AU094574 AU094574 Rice panicle at ripening st... 561 e-157
gb|CA756271.1|CA756271 BR030039000_PLATE_A03_17_019.ab1 OA ... 543 e-152
gb|AU161098.1|AU161098 AU161098 Rice callus Oryza sativa (j... 507 e-141
gb|AU164242.1|AU164242 AU164242 Rice panicle (longer than 1... 486 e-134
gb|CA755255.1|CA755255 BR030016000_PLATE_E08_61_066.ab1 OA ... 468 e-129
dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD ... 452 e-124
gb|AU093267.1|AU093267 AU093267 Rice callus Oryza sativa (j... 424 e-116
gb|C99450.2|C99450 C99450 Rice panicle (longer than 10cm) O... 416 e-113
gb|AU096692.1|AU096692 AU096692 Rice green shoot Oryza sati... 400 e-109
gb|AU100927.1|AU100927 AU100927 Rice callus Oryza sativa (j... 396 e-107
gb|AU197396.1|AU197396 AU197396 Rice root Oryza sativa (jap... 396 e-107
dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA... 373 e-100
gb|AU163932.1|AU163932 AU163932 Rice panicle at ripening st... 369 3e-099
gb|AU164498.1|AU164498 AU164498 Rice root Oryza sativa (jap... 369 3e-099
gb|AU161892.1|AU161892 AU161892 Rice shoot Oryza sativa (ja... 367 1e-098
gb|AU101877.1|AU101877 AU101877 Rice green shoot Oryza sati... 347 1e-092
gb|AU097594.1|AU097594 AU097594 Rice shoot Oryza sativa (ja... 339 3e-090
gb|D48938.1|D48938 RICS15522A Rice green shoot Oryza sativa... 264 1e-067
gb|C20345.1|C20345 C20345 Rice panicle at ripening stage Or... 256 3e-065
gb|AU161891.1|AU161891 AU161891 Rice shoot Oryza sativa (ja... 248 8e-063
gb|D39349.1|D39349 RICR3383A Rice root Oryza sativa (japoni... 244 1e-061
gb|CB682900.1|CB682900 OSJNEf10K22.f OSJNEf Oryza sativa (j... 238 7e-060
gb|AU097593.1|AU097593 AU097593 Rice shoot Oryza sativa (ja... 236 3e-059
gb|AU062947.2|AU062947 AU062947 Rice callus Oryza sativa (j... 236 3e-059
gb|D49248.1|D49248 RICS16393A Rice green shoot Oryza sativa... 232 4e-058
gb|AU100926.1|AU100926 AU100926 Rice callus Oryza sativa (j... 232 4e-058
gb|D23884.1|D23884 RICR0512A Rice root Oryza sativa (japoni... 228 7e-057
gb|D40685.1|D40685 RICS2794A Rice shoot Oryza sativa (japon... 220 2e-054
gb|AU163144.1|AU163144 AU163144 Rice green shoot Oryza sati... 206 3e-050
gb|AU181410.1|AU181410 AU181410 Rice callus (2001) Oryza sa... 182 4e-043
gb|D49206.2|D49206 RICS16319A Rice green shoot Oryza sativa... 165 9e-038
gb|AU161099.1|AU161099 AU161099 Rice callus Oryza sativa (j... 163 3e-037
gb|AU032926.1|AU032926 AU032926 Rice green shoot Oryza sati... 159 5e-036
gb|D40585.1|D40585 RICS2657A Rice shoot Oryza sativa (japon... 143 3e-031
emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC O... 133 3e-028
ref|NT_107112.1| Oryza sativa (japonica cultivar-group) 133 3e-028
gb|AACV01022232.1| Oryza sativa (japonica cultivar-group) c... 133 3e-028
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 133 3e-028
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 133 3e-028
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 133 3e-028
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 133 3e-028
gb|AU183643.1|AU183643 AU183643 Rice panicle (longer than 1... 131 1e-027
gb|C27657.2|C27657 C27657 Rice callus cDNA Oryza sativa (ja... 117 2e-023
gb|C99609.1|C99609 C99609 Rice panicle (longer than 10cm) O... 113 3e-022
gb|D49279.2|D49279 RICS16477A Rice green shoot Oryza sativa... 107 2e-020
gb|D40580.1|D40580 RICS2652A Rice shoot Oryza sativa (japon... 94 3e-016
gb|AU183147.1|AU183147 AU183147 Rice immature leaf includin... 86 6e-014
gb|AU064324.1|AU064324 AU064324 Rice panicle (longer than 1... 84 3e-013
gb|CB642809.1|CB642809 OSJNEb03C24.r OSJNEb Oryza sativa (j... 84 3e-013
gb|CB648808.1|CB648808 OSJNEb12G05.r OSJNEb Oryza sativa (j... 84 3e-013
gb|CB648870.1|CB648870 OSJNEb12H19.r OSJNEb Oryza sativa (j... 84 3e-013
gb|CB654179.1|CB654179 OSJNEc05O24.r OSJNEc Oryza sativa (j... 84 3e-013
dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA... 84 3e-013
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) c... 84 3e-013
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 84 3e-013
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 84 3e-013
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 84 3e-013
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA... 78 2e-011
gb|AQ856356.1|AQ856356 nbeb0001N08f CUGI Rice BAC Library (... 76 6e-011
gb|AQ856777.1|AQ856777 nbeb0004K05f CUGI Rice BAC Library (... 76 6e-011
gb|AZ127071.1|AZ127071 OSJNBb0083C09f CUGI Rice BAC Library... 76 6e-011
gb|CB642808.1|CB642808 OSJNEb03C24.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB646344.1|CB646344 OSJNEb08M02.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB646877.1|CB646877 OSJNEb09J03.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB648706.1|CB648706 OSJNEb12D16.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB648869.1|CB648869 OSJNEb12H19.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB649072.1|CB649072 OSJNEb12M23.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB649137.1|CB649137 OSJNEb12O16.f OSJNEb Oryza sativa (j... 76 6e-011
gb|CB655787.1|CB655787 OSJNEc09I09.f OSJNEc Oryza sativa (j... 76 6e-011
gb|CB655789.1|CB655789 OSJNEc09I13.f OSJNEc Oryza sativa (j... 76 6e-011
gb|CB657549.1|CB657549 OSJNEc12P22.f OSJNEc Oryza sativa (j... 76 6e-011
gb|CB665926.1|CB665926 OSJNEd12J17.f OSJNEd Oryza sativa (j... 76 6e-011
gb|CB665965.1|CB665965 OSJNEd12K13.f OSJNEd Oryza sativa (j... 76 6e-011
gb|CB674810.1|CB674810 OSJNEe10A24.f OSJNEe Oryza sativa (j... 76 6e-011
gb|CB674812.1|CB674812 OSJNEe10B01.f OSJNEe Oryza sativa (j... 76 6e-011
gb|CB674967.1|CB674967 OSJNEe10F17.f OSJNEe Oryza sativa (j... 76 6e-011
gb|CB685456.1|CB685456 OSJNEf15N17.f OSJNEf Oryza sativa (j... 76 6e-011
dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA... 76 6e-011
gb|CB655413.1|CB655413 OSJNEc08N04.f OSJNEc Oryza sativa (j... 74 2e-010
gb|CB646345.1|CB646345 OSJNEb08M02.r OSJNEb Oryza sativa (j... 70 4e-009
gb|CB646878.1|CB646878 OSJNEb09J03.r OSJNEb Oryza sativa (j... 70 4e-009
gb|CB653589.1|CB653589 OSJNEc04M09.r OSJNEc Oryza sativa (j... 70 4e-009
gb|CB654463.1|CB654463 OSJNEc07A05.f OSJNEc Oryza sativa (j... 70 4e-009
gb|CB655788.1|CB655788 OSJNEc09I09.r OSJNEc Oryza sativa (j... 70 4e-009
gb|CB657550.1|CB657550 OSJNEc12P22.r OSJNEc Oryza sativa (j... 70 4e-009
gb|CB665927.1|CB665927 OSJNEd12J17.r OSJNEd Oryza sativa (j... 70 4e-009
gb|CB673521.1|CB673521 OSJNEe08B11.r OSJNEe Oryza sativa (j... 70 4e-009
gb|CB674968.1|CB674968 OSJNEe10F17.r OSJNEe Oryza sativa (j... 70 4e-009
gb|CB681488.1|CB681488 OSJNEf07M17.r OSJNEf Oryza sativa (j... 70 4e-009
gb|AU077741.1|AU077741 AU077741 Rice cDNA from young root O... 68 2e-008
dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-008
gb|D48506.1|D48506 RICS14727A Rice green shoot Oryza sativa... 66 6e-008
gb|AU097525.1|AU097525 AU097525 Rice shoot Oryza sativa (ja... 62 9e-007
gb|AU101083.1|AU101083 AU101083 Rice panicle at flowering s... 62 9e-007
gb|CB653588.1|CB653588 OSJNEc04M09.f OSJNEc Oryza sativa (j... 62 9e-007
dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
gb|AACV01008340.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
ref|XM_474988.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|NT_107205.1| Oryza sativa (japonica cultivar-group) 60 4e-006
gb|CH401180.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromoso... 60 4e-006
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AQ914526.1|AQ914526 nbeb0049I15f CUGI Rice BAC Library (... 56 6e-005
gb|AU166356.1|AU166356 AU166356 Rice callus (2001) Oryza sa... 56 6e-005
gb|AACV01029126.1| Oryza sativa (japonica cultivar-group) C... 56 6e-005
gb|CB684558.1|CB684558 OSJNEf14D06.f OSJNEf Oryza sativa (j... 54 2e-004
gb|AC105364.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AACV01006124.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NM_187696.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CB655414.1|CB655414 OSJNEc08N04.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB655790.1|CB655790 OSJNEc09I13.r OSJNEc Oryza sativa (j... 52 0.001
gb|AZ133374.1|AZ133374 OSJNBb0108H22r CUGI Rice BAC Library... 50 0.004
gb|C71996.1|C71996 C71996 Rice panicle at flowering stage O... 50 0.004
gb|CB668738.1|CB668738 OSJNEd16L18.f OSJNEd Oryza sativa (j... 50 0.004
gb|CF280516.1|CF280516 14ETL--07-D15.b1 Rice etiolated leaf... 50 0.004
dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|AACV01010470.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
ref|XM_473865.1| Oryza sativa (japonica cultivar-group), p... 50 0.004
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 50 0.004
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 50 0.004
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AK108094.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.014
gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 ... 48 0.014
dbj|AP005317.3| Oryza sativa (japonica cultivar-group) geno... 48 0.014
gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 ... 48 0.014
gb|AACV01004360.1| Oryza sativa (japonica cultivar-group) c... 48 0.014
gb|AACV01007432.1| Oryza sativa (japonica cultivar-group) c... 48 0.014
gb|AACV01025969.1| Oryza sativa (japonica cultivar-group) C... 48 0.014
gb|AC104711.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.014
ref|XM_469009.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.014
ref|NT_079918.2| Oryza sativa (japonica cultivar-group) 48 0.014
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 48 0.014
ref|NT_107209.1| Oryza sativa (japonica cultivar-group) 48 0.014
gb|CH401376.1| Oryza sativa (japonica cultivar-group) scaff... 48 0.014
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.014
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.014
gb|AZ125939.1|AZ125939 OSJNBb0072E09f CUGI Rice BAC Library... 46 0.056
gb|D47252.1|D47252 RICS12515A Rice green shoot Oryza sativa... 46 0.056
gb|D47666.1|D47666 RICS13294A Rice green shoot Oryza sativa... 46 0.056
gb|D47797.1|D47797 RICS13489A Rice green shoot Oryza sativa... 46 0.056
gb|D47861.1|D47861 RICS13592A Rice green shoot Oryza sativa... 46 0.056
gb|AU067937.1|AU067937 AU067937 Rice callus Oryza sativa (j... 46 0.056
gb|AU068706.1|AU068706 AU068706 Rice callus Oryza sativa (j... 46 0.056
gb|AU082563.1|AU082563 AU082563 Rice mature leaf Oryza sati... 46 0.056
gb|AU182365.1|AU182365 AU182365 Rice panicle at flowering s... 46 0.056
gb|CB639963.1|CB639963 OSJNEa12K23.f OSJNEa Oryza sativa (j... 46 0.056
gb|CB641242.1|CB641242 OSJNEa18G15.f OSJNEa Oryza sativa (j... 46 0.056
gb|CB647284.1|CB647284 OSJNEb10C10.f OSJNEb Oryza sativa (j... 46 0.056
gb|CB647308.1|CB647308 OSJNEb10C24.f OSJNEb Oryza sativa (j... 46 0.056
gb|CB651646.1|CB651646 OSJNEb16L01.f OSJNEb Oryza sativa (j... 46 0.056
gb|CB656228.1|CB656228 OSJNEc10F06.f OSJNEc Oryza sativa (j... 46 0.056
dbj|AK071503.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
dbj|AK101899.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
dbj|AK102594.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
dbj|AK120360.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC O... 46 0.056
gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A0... 46 0.056
gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 ... 46 0.056
dbj|AP005620.3| Oryza sativa (japonica cultivar-group) geno... 46 0.056
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
dbj|AP003896.3| Oryza sativa (japonica cultivar-group) geno... 46 0.056
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 46 0.056
gb|AC135928.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|AC135927.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|AACV01000620.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01002982.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01007246.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01011965.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01012446.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01013110.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01021723.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
gb|AACV01024457.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.056
ref|NM_184802.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.056
ref|NM_189996.1| Oryza sativa (japonica cultivar-group), p... 46 0.056
ref|NM_196836.1| Oryza sativa (japonica cultivar-group) hyp... 46 0.056
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.056
ref|XM_479972.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.056
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 46 0.056
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 46 0.056
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 46 0.056
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 46 0.056
ref|NM_187958.1| Oryza sativa (japonica cultivar-group), Oz... 46 0.056
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 46 0.056
dbj|AP002071.2| Oryza sativa (japonica cultivar-group) geno... 46 0.056
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 46 0.056
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 46 0.056
dbj|AP001366.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP002817.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP004330.3| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP004332.3| Oryza sativa (japonica cultivar-group) geno... 46 0.056
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|AQ258029.1|AQ258029 nbxb0019H23f CUGI Rice BAC Library O... 44 0.22
gb|AQ860402.1|AQ860402 nbeb0015I07f CUGI Rice BAC Library (... 44 0.22
gb|AQ912567.1|AQ912567 nbeb0037L19r CUGI Rice BAC Library (... 44 0.22
gb|AY873243.1|AY873243 04ET3_288_A_010_013_028G10 Oryza sat... 44 0.22
gb|D23495.1|D23495 RICC2904A Rice callus Oryza sativa (japo... 44 0.22
gb|AU031122.1|AU031122 AU031122 Rice cDNA from immature lea... 44 0.22
gb|AU070000.1|AU070000 AU070000 Rice panicle shorter than 3... 44 0.22
gb|AU077742.1|AU077742 AU077742 Rice cDNA from young root O... 44 0.22
gb|AU081251.1|AU081251 AU081251 Rice callus Oryza sativa (j... 44 0.22
gb|BE039231.1|BE039231 OA01G04 OA Oryza sativa (japonica cu... 44 0.22
gb|AU161123.1|AU161123 AU161123 Rice callus Oryza sativa (j... 44 0.22
gb|AU163566.1|AU163566 AU163566 Rice panicle at flowering s... 44 0.22
gb|AU166163.1|AU166163 AU166163 Rice immature leaf includin... 44 0.22
gb|CA755507.1|CA755507 BR030022000_PLATE_F03_22_029.ab1 OA ... 44 0.22
gb|CA758951.1|CA758951 BR030033000_PLATE_H05_40_046.ab1 OA ... 44 0.22
gb|CB642787.1|CB642787 OSJNEb03C12.f OSJNEb Oryza sativa (j... 44 0.22
gb|CB653270.1|CB653270 OSJNEc04C09.f OSJNEc Oryza sativa (j... 44 0.22
gb|CB653734.1|CB653734 OSJNEc05A19.f OSJNEc Oryza sativa (j... 44 0.22
gb|CB655526.1|CB655526 OSJNEc09A20.f OSJNEc Oryza sativa (j... 44 0.22
gb|CB661069.1|CB661069 OSJNEd03H17.f OSJNEd Oryza sativa (j... 44 0.22
gb|CB671923.1|CB671923 OSJNEe05L12.f OSJNEe Oryza sativa (j... 44 0.22
gb|CF279981.1|CF279981 14ETL--06-H19.b1 Rice etiolated leaf... 44 0.22
gb|CF290903.1|CF290903 14ROOT--01-B22.b1 Rice root plasmid ... 44 0.22
gb|CF321758.1|CF321758 HD--13-B24.b1 OsHDAC1-overexpressing... 44 0.22
gb|CF321780.1|CF321780 HD--13-C11.b1 OsHDAC1-overexpressing... 44 0.22
gb|CF325699.1|CF325699 JMT1--03-P01.g1 AtJMT-overexpressing... 44 0.22
gb|CF325905.1|CF325905 JMT1--04-I20.g1 AtJMT-overexpressing... 44 0.22
gb|CF332871.1|CF332871 JMT--01-I19.b1 AtJMT-overexpressing ... 44 0.22
gb|CF336332.1|CF336332 JMT--06-F14.b1 AtJMT-overexpressing ... 44 0.22
gb|CV724081.1|CV724081 root--05-M07.g1 Rice root lambda pha... 44 0.22
gb|CV725591.1|CV725591 14Salt--02-M04.b1 Salt treated rice ... 44 0.22
gb|CV733520.1|CV733520 FLO--08-H14.b1 Rice flower lambda ph... 44 0.22
gb|AU181902.2|AU181902 AU181902 Rice callus (2001) Oryza sa... 44 0.22
gb|BP184395.1|BP184395 BP184395 pNS rice panicle cDNA, germ... 44 0.22
emb|AL606593.1|OSJN00026 Oryza sativa (japonica cultivar-gr... 44 0.22
dbj|AP003891.1| Oryza sativa (japonica cultivar-group) chro... 44 0.22
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 44 0.22
dbj|AP003927.1| Oryza sativa (japonica cultivar-group) chro... 44 0.22
dbj|AP004345.1| Oryza sativa (japonica cultivar-group) chro... 44 0.22
dbj|AP005381.1| Oryza sativa (japonica cultivar-group) chro... 44 0.22
gb|AC121360.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AK058337.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK063565.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK063723.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK066203.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK067515.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK067666.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK067917.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK068665.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK070295.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK070367.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK070814.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK071036.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK071904.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK099787.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK099933.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK103217.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK103761.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK104417.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK105622.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK105980.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK109208.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK112083.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK120378.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK121258.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AK121618.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC O... 44 0.22
gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa... 44 0.22
gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A1... 44 0.22
gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, N... 44 0.22
gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H0... 44 0.22
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 44 0.22
gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbar... 44 0.22
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 44 0.22
gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 ... 44 0.22
gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 gen... 44 0.22
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 44 0.22
gb|AC108870.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP004585.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003911.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AK104988.2| Oryza sativa (japonica cultivar-group) cDNA... 44 0.22
dbj|AP004623.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP005542.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC O... 44 0.22
dbj|AP004070.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC O... 44 0.22
dbj|AP004275.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|AC124143.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP005673.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP004756.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP004011.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
ref|NT_107114.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107134.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 44 0.22
gb|AC124142.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|AC148814.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP003316.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003303.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|AACV01000611.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01001787.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01002113.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01002368.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01002846.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01003690.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01005006.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01006521.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01007640.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01007820.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01008184.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01008375.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01010015.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01010235.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01010237.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01010876.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01012282.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01012717.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01013548.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01013678.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01015743.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01016703.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01017024.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01017232.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01018503.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01018689.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01019005.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01019166.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01019458.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01022112.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01022727.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01023717.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01023718.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01024404.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01025501.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
dbj|AP003044.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003538.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
ref|NM_184884.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|NM_185161.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|NM_189502.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_190263.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_191275.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_191985.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_192039.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_192692.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_197741.1| Oryza sativa (japonica cultivar-group) put... 44 0.22
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 44 0.22
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.22
ref|XM_450174.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_466971.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_469583.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_469648.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_472965.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|XM_477422.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_480030.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_482494.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|XM_483821.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079919.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107076.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|XM_506883.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.22
ref|XM_507128.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.22
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NM_187935.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
dbj|AP005582.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 44 0.22
dbj|AP003223.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003335.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003264.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 44 0.22
dbj|AP002525.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003349.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003228.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401232.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401222.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromoso... 44 0.22
emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromoso... 44 0.22
emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromoso... 44 0.22
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|AC135460.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|AC116949.11| Oryza sativa (japonica cultivar-group) chro... 44 0.22
gb|AC146936.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|AQ578814.1|AQ578814 nbxb0093D09r CUGI Rice BAC Library O... 42 0.87
gb|AQ857032.1|AQ857032 nbeb0005C19f CUGI Rice BAC Library (... 42 0.87
gb|AQ363609.2|AQ363609 nbxb0059O18r CUGI Rice BAC Library O... 42 0.87
gb|C20198.1|C20198 C20198 Rice panicle at ripening stage Or... 42 0.87
gb|C24898.1|C24898 C24898 Rice green shoot Oryza sativa (ja... 42 0.87
gb|C72961.1|C72961 C72961 Rice panicle at flowering stage O... 42 0.87
gb|C74354.1|C74354 C74354 Rice panicle shorter than 3cm Ory... 42 0.87
gb|AU064461.1|AU064461 AU064461 Rice panicle shorter than 3... 42 0.87
gb|AU064462.1|AU064462 AU064462 Rice panicle shorter than 3... 42 0.87
gb|AU068019.1|AU068019 AU068019 Rice callus Oryza sativa (j... 42 0.87
gb|AU068175.1|AU068175 AU068175 Rice callus Oryza sativa (j... 42 0.87
gb|AU068983.1|AU068983 AU068983 Rice callus Oryza sativa (j... 42 0.87
gb|AU069042.1|AU069042 AU069042 Rice callus Oryza sativa (j... 42 0.87
gb|AU082343.1|AU082343 AU082343 Rice callus Oryza sativa (j... 42 0.87
gb|AU082421.1|AU082421 AU082421 Rice root Oryza sativa (jap... 42 0.87
gb|AU101635.1|AU101635 AU101635 Rice root Oryza sativa (jap... 42 0.87
gb|AU161596.1|AU161596 AU161596 Rice shoot Oryza sativa (ja... 42 0.87
gb|AU172899.1|AU172899 AU172899 Rice panicle (between 3cm t... 42 0.87
gb|AU173418.1|AU173418 AU173418 Rice root Oryza sativa (jap... 42 0.87
gb|AU183723.1|AU183723 AU183723 Rice panicle at ripening st... 42 0.87
gb|AU197748.1|AU197748 AU197748 Rice mature leaf Oryza sati... 42 0.87
gb|AU198248.1|AU198248 AU198248 Rice green shoot Oryza sati... 42 0.87
gb|CA754383.1|CA754383 BR040015000_PLATE_G03_23_022.ab1 OA ... 42 0.87
gb|CA754633.1|CA754633 BR030003000_PLATE_E07_53_053.ab1 OA ... 42 0.87
gb|CB644890.1|CB644890 OSJNEb06E18.r OSJNEb Oryza sativa (j... 42 0.87
gb|CB651997.1|CB651997 OSJNEc01E24.r OSJNEc Oryza sativa (j... 42 0.87
gb|CB655803.1|CB655803 OSJNEc09I22.f OSJNEc Oryza sativa (j... 42 0.87
gb|CB660211.1|CB660211 OSJNEd01M05.f OSJNEd Oryza sativa (j... 42 0.87
gb|CB660212.1|CB660212 OSJNEd01M06.r OSJNEd Oryza sativa (j... 42 0.87
gb|CB664609.1|CB664609 OSJNEd10G22.f OSJNEd Oryza sativa (j... 42 0.87
gb|CB672261.1|CB672261 OSJNEe06D10.f OSJNEe Oryza sativa (j... 42 0.87
gb|CB672262.1|CB672262 OSJNEe06D10.r OSJNEe Oryza sativa (j... 42 0.87
gb|CB678719.1|CB678719 OSJNEf01D15.f OSJNEf Oryza sativa (j... 42 0.87
gb|CB679308.1|CB679308 OSJNEf02K14.f OSJNEf Oryza sativa (j... 42 0.87
gb|CB685096.1|CB685096 OSJNEf15D24.f OSJNEf Oryza sativa (j... 42 0.87
gb|CF291010.1|CF291010 14ROOT--01-E09.g1 Rice root plasmid ... 42 0.87
gb|CF291854.1|CF291854 14ROOT--02-H09.g1 Rice root plasmid ... 42 0.87
gb|CF305517.1|CF305517 CLD1--01-O21.b1 Rice cold treated le... 42 0.87
gb|CF321966.1|CF321966 HD--13-G09.b1 OsHDAC1-overexpressing... 42 0.87
gb|CF325533.1|CF325533 JMT1--03-H23.g1 AtJMT-overexpressing... 42 0.87
gb|CF325598.1|CF325598 JMT1--03-K19.g1 AtJMT-overexpressing... 42 0.87
gb|CF325806.1|CF325806 JMT1--04-E05.g1 AtJMT-overexpressing... 42 0.87
gb|CF325928.1|CF325928 JMT1--04-J22.g1 AtJMT-overexpressing... 42 0.87
gb|CF326768.1|CF326768 JMT1--06-P12.g1 AtJMT-overexpressing... 42 0.87
gb|CF334127.1|CF334127 JMT--03-E20.b1 AtJMT-overexpressing ... 42 0.87
gb|CF339396.1|CF339396 RCL1--04-L23.g1 Regenerated callus l... 42 0.87
gb|CV722570.1|CV722570 YTPSP--01-N20.b1 TPSP-overexpression... 42 0.87
gb|CV728226.1|CV728226 14Salt--06-N04.b1 Salt treated rice ... 42 0.87
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1387
Score = 1021 bits (515), Expect = 0.0
Identities = 905/1035 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 174 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 233
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 234 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 293
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 294 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 353
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 354 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgt 413
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || ||
Sbjct: 414 cggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtgga 473
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 474 gcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaac 533
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggc 593
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||| || || |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 594 ggggctagcgccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagccc 653
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
||||||||||| ||||||| | || || ||||| |||||| ||||||| ||||||||
Sbjct: 654 actgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcgg 713
Query: 700 cgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcag 759
|||||| ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct: 714 cgtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcag 773
Query: 760 ctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagt 819
||||||| | | |||||||| ||||| |||||| |||| ||||| ||||| ||||| ||
Sbjct: 774 ctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgt 833
Query: 820 gagctcggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacac 879
||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 834 cagctccgacgcggcggcgatggcggccgccggcgactcgctggactacatcatcgacac 893
Query: 880 ggtgcccgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagct 939
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 894 cgtgccggtgcaccacccgctggagccgtacctggcgctgctgaagctggacgggaagct 953
Query: 940 cgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggg 999
| ||| |||| || ||| | |||| ||||||||| | ||||||||||||||||| ||
Sbjct: 954 gatcctgatgggggtgatcaaccagccgctgagcttcatctcgcccatggtgatgctcgg 1013
Query: 1000 gcggaaggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttca 1059
|||||||||||||| || ||||||||||| ||||| | |||||| | |||||||| |
Sbjct: 1014 ccggaaggccatcaccggcagcttcatcgggagcatggccgagacggaggaggtgctcaa 1073
Query: 1060 gttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaa 1119
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 1074 cttctgcgtcgacaaggggctcacctcccagatcgaggtcgtcaagatggactacgtcaa 1133
Query: 1120 cgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
| |||| || ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 ccaggccctcgagcgcctcgagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1193
Query: 1180 cggtagcaacgtcga 1194
||| |||||| ||||
Sbjct: 1194 cggcagcaacatcga 1208
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA
Length = 1396
Score = 1021 bits (515), Expect = 0.0
Identities = 905/1035 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 168 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 227
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 228 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 287
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 288 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 347
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 348 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgt 407
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || ||
Sbjct: 408 cggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtgga 467
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 468 gcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaac 527
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggc 587
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||| || || |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 588 ggggctagcgccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagccc 647
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
||||||||||| ||||||| | || || ||||| |||||| ||||||| ||||||||
Sbjct: 648 actgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcgg 707
Query: 700 cgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcag 759
|||||| ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct: 708 cgtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcag 767
Query: 760 ctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagt 819
||||||| | | |||||||| ||||| |||||| |||| ||||| ||||| ||||| ||
Sbjct: 768 ctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgt 827
Query: 820 gagctcggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacac 879
||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 828 cagctccgacgcggcggcgatggcggccgccggcgactcgctggactacatcatcgacac 887
Query: 880 ggtgcccgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagct 939
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 888 cgtgccggtgcaccacccgctggagccgtacctggcgctgctgaagctggacgggaagct 947
Query: 940 cgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggg 999
| ||| |||| || ||| | |||| ||||||||| | ||||||||||||||||| ||
Sbjct: 948 gatcctgatgggggtgatcaaccagccgctgagcttcatctcgcccatggtgatgctcgg 1007
Query: 1000 gcggaaggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttca 1059
|||||||||||||| || ||||||||||| ||||| | |||||| | |||||||| |
Sbjct: 1008 ccggaaggccatcaccggcagcttcatcgggagcatggccgagacggaggaggtgctcaa 1067
Query: 1060 gttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaa 1119
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 1068 cttctgcgtcgacaaggggctcacctcccagatcgaggtcgtcaagatggactacgtcaa 1127
Query: 1120 cgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
| |||| || ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 ccaggccctcgagcgcctcgagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1187
Query: 1180 cggtagcaacgtcga 1194
||| |||||| ||||
Sbjct: 1188 cggcagcaacatcga 1202
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full
insert sequence
Length = 1396
Score = 1013 bits (511), Expect = 0.0
Identities = 904/1035 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 168 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 227
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 228 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 287
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 288 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 347
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 348 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgt 407
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || ||
Sbjct: 408 cggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtgga 467
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 468 gcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaac 527
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggc 587
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||| || || |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 588 ggggctagcgccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagccc 647
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
||||||||||| ||||||| | || || ||||| |||||| ||||||| ||||||||
Sbjct: 648 actgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcgg 707
Query: 700 cgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcag 759
|||||| ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct: 708 cgtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcag 767
Query: 760 ctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagt 819
||||||| | | |||||||| ||||| |||||| |||| ||||| ||||| ||||| ||
Sbjct: 768 ctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgt 827
Query: 820 gagctcggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacac 879
||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 828 cagctccgacgcggcggcgatggcggccgccggcgactcgctggactacatcatcgacac 887
Query: 880 ggtgcccgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagct 939
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 888 cgtgccggtgcaccacccgctggagccgtacctggcgctgctgaagctggacgggaagct 947
Query: 940 cgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggg 999
| ||| |||| || ||| | |||| ||||||||| | ||||||||||||||||| ||
Sbjct: 948 gatcctgatgggggtgatcaaccagccgctgagcttcatctcgcccatggtgatgctcgg 1007
Query: 1000 gcggaaggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttca 1059
|||||||||||||| || ||||||||||| ||||| | |||||| | |||||||| |
Sbjct: 1008 ccggaaggccatcaccggcagcttcatcgggagcatggccgagacggaggaggtgctcaa 1067
Query: 1060 gttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaa 1119
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 1068 cttctgcgtcgacaaggggctcacctcccagatcgaggtcgtcaagatggactacgtcaa 1127
Query: 1120 cgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
| |||| || ||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1128 ccaggccctcgagcgcctcgagcgcaacgacgtccgctagcgcttcgtcgtcgacgtcgc 1187
Query: 1180 cggtagcaacgtcga 1194
||| |||||| ||||
Sbjct: 1188 cggcagcaacatcga 1202
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full
insert sequence
Length = 1376
Score = 1013 bits (511), Expect = 0.0
Identities = 904/1035 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 167 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 226
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 227 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 286
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 287 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 346
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 347 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgt 406
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || ||
Sbjct: 407 cggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtgga 466
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 467 gcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaac 526
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggc 586
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
||| || || |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 587 ggggctagcgccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagccc 646
Query: 640 gctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcgg 699
||||||||||| ||||||| | || || ||||| |||||| ||||||| ||||||||
Sbjct: 647 actgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcgg 706
Query: 700 cgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcag 759
|||||| ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||
Sbjct: 707 cgtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcag 766
Query: 760 ctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagt 819
||||||| | | |||||||| ||||| |||||| |||| ||||| ||||| ||||| ||
Sbjct: 767 ctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgt 826
Query: 820 gagctcggacgccgcggccatggcggcggccgccgactcgctggactacatcatcgacac 879
||||| ||||| ||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct: 827 cagctccgacgcggcggcgatggcggccgccggcgactcgctggactacatcatcgacac 886
Query: 880 ggtgcccgtgcaccacccgctggagccgtacctggcgctgctgaagctggacggcaagct 939
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 887 cgtgccggtgcaccacccgctggagccgtacctggcgctgctgaagctggacgggaagct 946
Query: 940 cgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcgcccatggtgatgctggg 999
| ||| |||| || ||| | |||| ||||||||| | ||||||||||||||||| ||
Sbjct: 947 gatcctgatgggggtgatcaaccagccgctgagcttcatctcgcccatggtgatgctcgg 1006
Query: 1000 gcggaaggccatcacggggagcttcatcggcagcatcgacgagaccgctgaggtgcttca 1059
||| |||||||||| || ||||||||||| ||||| | |||||| | |||||||| |
Sbjct: 1007 ccgggaggccatcaccggcagcttcatcgggagcatggccgagacggaggaggtgctcaa 1066
Query: 1060 gttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaa 1119
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 1067 cttctgcgtcgacaaggggctcacctcccagatcgaggtcgtcaagatggactacgtcaa 1126
Query: 1120 cgaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1179
| |||| || ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 ccaggccctcgagcgcctcgagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgc 1186
Query: 1180 cggtagcaacgtcga 1194
||| |||||| ||||
Sbjct: 1187 cggcagcaacatcga 1201
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full
insert sequence
Length = 1103
Score = 928 bits (468), Expect = 0.0
Identities = 816/932 (87%)
Strand = Plus / Plus
Query: 263 atctgccacacggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatg 322
|||||||| || |||||||||||||||||||||||||| || ||||| ||||| || |||
Sbjct: 14 atctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatg 73
Query: 323 gtccctgggcacgaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
|||||||| || |||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 74 gtccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtac 133
Query: 383 ggcgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccc 442
||| ||||||||| || |||||||| || ||||| || ||||||||||||||| ||
Sbjct: 134 agcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccg 193
Query: 443 tgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctac 502
||||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 194 tgcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctac 253
Query: 503 actgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagttt 562
|| || || ||||| || ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 254 accgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagttt 313
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 314 gtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgccggg 373
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
|||||||||||||||| ||||||||||| ||||||| | || || ||||| ||||||
Sbjct: 374 ctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggcggc 433
Query: 683 atcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccac 742
||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||| |||
Sbjct: 434 gtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggggcac 493
Query: 743 cacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggc 802
|||||||||||||||||||||||| | | |||||||| ||||| |||||| |||| |||
Sbjct: 494 cacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctgggc 553
Query: 803 gcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactcgctg 862
|| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||||||
Sbjct: 554 gccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactcgctg 613
Query: 863 gactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctgctg 922
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 614 gactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgctgctg 673
Query: 923 aagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcg 982
||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| | |||
Sbjct: 674 aagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcatctcg 733
Query: 983 cccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcgacgag 1042
|||||||||||||| || |||||||||||||| || ||||||||||| ||||| | ||||
Sbjct: 734 cccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggccgag 793
Query: 1043 accgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggtggtc 1102
|| | |||||||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 794 acggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggtcgtc 853
Query: 1103 aagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctaccgc 1162
||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||||||
Sbjct: 854 aagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgctaccgc 913
Query: 1163 ttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||| |||||| ||||
Sbjct: 914 ttcgtcgtcgacgtcgccggcagcaacatcga 945
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 634 bits (320), Expect = e-179
Identities = 557/636 (87%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgc 618
|||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 243047 gtttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgc 242988
Query: 619 tggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtgg 678
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| ||
Sbjct: 242987 cgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcgg 242928
Query: 679 cggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatggg 738
|||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 242927 cggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggg 242868
Query: 739 ccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacct 798
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 242867 gcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacct 242808
Query: 799 cggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactc 858
||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||
Sbjct: 242807 gggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactc 242748
Query: 859 gctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgct 918
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 242747 gctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgct 242688
Query: 919 gctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgt 978
||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| |
Sbjct: 242687 gctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcat 242628
Query: 979 gtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcga 1038
||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 242627 ctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggc 242568
Query: 1039 cgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggt 1098
|||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 242567 cgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggt 242508
Query: 1099 ggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgcta 1158
|||||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||
Sbjct: 242507 cgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgcta 242448
Query: 1159 ccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||| |||||| ||||
Sbjct: 242447 ccgcttcgtcgtcgacgtcgccggcagcaacatcga 242412
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 244313 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 244254
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 244253 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 244194
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 244193 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 244134
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 244133 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 244088
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 245062 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 245003
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 245002 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 244945
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 245941 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 245884
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1145_F01
Length = 113755
Score = 634 bits (320), Expect = e-179
Identities = 557/636 (87%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgc 618
|||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 15714 gtttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgc 15655
Query: 619 tggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtgg 678
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| ||
Sbjct: 15654 cgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcgg 15595
Query: 679 cggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatggg 738
|||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 15594 cggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggg 15535
Query: 739 ccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacct 798
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 15534 gcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacct 15475
Query: 799 cggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactc 858
||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||
Sbjct: 15474 gggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactc 15415
Query: 859 gctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgct 918
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 15414 gctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgct 15355
Query: 919 gctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgt 978
||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| |
Sbjct: 15354 gctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcat 15295
Query: 979 gtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcga 1038
||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 15294 ctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggc 15235
Query: 1039 cgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggt 1098
|||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 15234 cgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggt 15175
Query: 1099 ggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgcta 1158
|||||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||
Sbjct: 15174 cgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgcta 15115
Query: 1159 ccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||| |||||| ||||
Sbjct: 15114 ccgcttcgtcgtcgacgtcgccggcagcaacatcga 15079
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 16980 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 16921
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 16920 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 16861
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 16860 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 16801
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 16800 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 16755
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 17729 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 17670
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 17669 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 17612
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 18608 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 18551
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1073_F05
Length = 124252
Score = 634 bits (320), Expect = e-179
Identities = 557/636 (87%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgc 618
|||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 113134 gtttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgc 113075
Query: 619 tggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtgg 678
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| ||
Sbjct: 113074 cgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcgg 113015
Query: 679 cggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatggg 738
|||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 113014 cggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggg 112955
Query: 739 ccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacct 798
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 112954 gcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacct 112895
Query: 799 cggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactc 858
||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||
Sbjct: 112894 gggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactc 112835
Query: 859 gctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgct 918
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 112834 gctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgct 112775
Query: 919 gctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgt 978
||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| |
Sbjct: 112774 gctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcat 112715
Query: 979 gtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcga 1038
||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 112714 ctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggc 112655
Query: 1039 cgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggt 1098
|||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 112654 cgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggt 112595
Query: 1099 ggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgcta 1158
|||||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||
Sbjct: 112594 cgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgcta 112535
Query: 1159 ccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||| |||||| ||||
Sbjct: 112534 ccgcttcgtcgtcgacgtcgccggcagcaacatcga 112499
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 114400 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 114341
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 114340 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 114281
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 114280 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 114221
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 114220 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 114175
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 115149 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 115090
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 115089 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 115032
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 116028 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 115971
>tpg|BK003969.1| TPA: Oryza sativa (japonica cultivar-group) cinnamyl alcohol
dehydrogenase (CAD2) gene, complete cds
Length = 4183
Score = 634 bits (320), Expect = e-179
Identities = 557/636 (87%)
Strand = Plus / Plus
Query: 559 gtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgc 618
|||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 3185 gtttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgc 3244
Query: 619 tggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtgg 678
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| ||
Sbjct: 3245 cgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcgg 3304
Query: 679 cggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatggg 738
|||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 3305 cggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggg 3364
Query: 739 ccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacct 798
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 3365 gcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacct 3424
Query: 799 cggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactc 858
||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||
Sbjct: 3425 gggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactc 3484
Query: 859 gctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgct 918
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3485 gctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgct 3544
Query: 919 gctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgt 978
||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| |
Sbjct: 3545 gctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcat 3604
Query: 979 gtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcga 1038
||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 3605 ctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggc 3664
Query: 1039 cgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggt 1098
|||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 3665 cgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggt 3724
Query: 1099 ggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgcta 1158
|||||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||
Sbjct: 3725 cgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgcta 3784
Query: 1159 ccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||| |||||| ||||
Sbjct: 3785 ccgcttcgtcgtcgacgtcgccggcagcaacatcga 3820
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Plus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 1919 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 1978
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 1979 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 2038
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 2039 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 2098
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 2099 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 2144
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 1170 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 1229
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 1230 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 1287
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 291 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 348
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 634 bits (320), Expect = e-179
Identities = 557/636 (87%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgc 618
|||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 4870975 gtttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgc 4870916
Query: 619 tggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtgg 678
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| ||
Sbjct: 4870915 cgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcgg 4870856
Query: 679 cggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatggg 738
|||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 4870855 cggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggg 4870796
Query: 739 ccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacct 798
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 4870795 gcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacct 4870736
Query: 799 cggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactc 858
||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||
Sbjct: 4870735 gggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactc 4870676
Query: 859 gctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgct 918
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 4870675 gctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgct 4870616
Query: 919 gctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgt 978
||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| |
Sbjct: 4870615 gctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcat 4870556
Query: 979 gtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcga 1038
||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 4870555 ctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggc 4870496
Query: 1039 cgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggt 1098
|||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 4870495 cgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggt 4870436
Query: 1099 ggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgcta 1158
|||||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||
Sbjct: 4870435 cgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgcta 4870376
Query: 1159 ccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||| |||||| ||||
Sbjct: 4870375 ccgcttcgtcgtcgacgtcgccggcagcaacatcga 4870340
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 4872241 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 4872182
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 4872181 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 4872122
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 4872121 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 4872062
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4872061 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 4872016
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 4872990 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 4872931
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 4872930 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 4872873
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 4873869 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 4873812
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 17306131 ggcggaggcggcggcggcggacgcggcc 17306158
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 25691116 gaggcggaggcggcggcggcgg 25691095
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 7577968 gaggcggaggcggcggcggcgg 7577989
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcg 1213
|||||||||||||||||| ||||||
Sbjct: 35762588 cgtcgaggcggaggcggccgcggcg 35762612
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1162 cttcgtcgtcgacgtcgccgg 1182
|||||||||||||||||||||
Sbjct: 35342883 cttcgtcgtcgacgtcgccgg 35342903
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 33760817 aggcggaggcggcggcggcgg 33760837
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 29764247 ggcggaggcggcggcggcgga 29764267
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 25603578 ggcggaggcggcggcggcgga 25603558
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 80 gccacccgctccgtcgtcgtcgtc 103
||||||||| ||||||||||||||
Sbjct: 31598616 gccacccgcaccgtcgtcgtcgtc 31598593
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||| || |||||||||
Sbjct: 28012775 ggaggcggcggcggcagaggcggccagc 28012802
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 26520498 ggcggaggcggcggcggcgg 26520479
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 26338817 ggcggaggcggcggcggcgg 26338836
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccg 110
||||||||||||||||||||
Sbjct: 25222048 cgtcgtcgtcgtccccgccg 25222067
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24496640 ggcggaggcggcggcggcgg 24496659
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 830 gccgcggccatggcggcggc 849
||||||||||||||||||||
Sbjct: 23839207 gccgcggccatggcggcggc 23839226
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21433017 ggcggaggcggcggcggcgg 21432998
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 84 cccgctccgtcgtcgtcgtccccgccgc 111
||||| |||||||||||||| |||||||
Sbjct: 21210441 cccgcgccgtcgtcgtcgtcgccgccgc 21210414
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 20843526 ggcggaggcggcggcggcgg 20843545
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 14178608 gcggaggcggcggcggcgga 14178627
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 9231896 gaggcggaggcggcggcggc 9231915
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 8183195 ggcggaggcggcggcggcgg 8183214
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcgg 1214
||||||||| ||||||||||||||
Sbjct: 8163932 tcgaggcggcggcggcggcggcgg 8163955
>gb|AACV01003516.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003516, whole
genome shotgun sequence
Length = 10487
Score = 620 bits (313), Expect = e-175
Identities = 557/637 (87%), Gaps = 1/637 (0%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatccc-ggcgggtctggctccggagcaagcggcgccgctgctgtgcg 617
|||||||||||||||||| |||||| || || |||||||| |||||||||||||||||||
Sbjct: 6649 gtttgtggtgaagatccccggcggggctagcgccggagcaggcggcgccgctgctgtgcg 6590
Query: 618 ctggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtg 677
| || |||||||||||||||| ||||||||||| ||||||| | || || ||||| |
Sbjct: 6589 ccgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcg 6530
Query: 678 gcggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgg 737
||||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 6529 gcggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatgg 6470
Query: 738 gccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacc 797
| ||||||||||||||||||||||||||| | | |||||||| ||||| |||||| |||
Sbjct: 6469 ggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacc 6410
Query: 798 tcggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgact 857
| ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 6409 tgggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgact 6350
Query: 858 cgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgc 917
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 6349 cgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgc 6290
Query: 918 tgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcg 977
|||||||||||||||| ||||| | ||| |||| || ||| | |||| |||||||||
Sbjct: 6289 tgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttca 6230
Query: 978 tgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcg 1037
| ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 6229 tctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatgg 6170
Query: 1038 acgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgagg 1097
|||||| | |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 6169 ccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgagg 6110
Query: 1098 tggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgct 1157
| |||||||||| ||||| ||| |||| || ||||| || |||||||||||||||||||
Sbjct: 6109 tcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgct 6050
Query: 1158 accgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
||||||||||||||||||||||||| |||||| ||||
Sbjct: 6049 accgcttcgtcgtcgacgtcgccggcagcaacatcga 6013
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 7915 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 7856
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 7855 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 7796
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 7795 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 7736
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 7735 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 7690
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 8664 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 8605
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 8604 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 8547
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 9543 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 9486
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 620 bits (313), Expect = e-175
Identities = 557/637 (87%), Gaps = 1/637 (0%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatccc-ggcgggtctggctccggagcaagcggcgccgctgctgtgcg 617
|||||||||||||||||| |||||| || || |||||||| |||||||||||||||||||
Sbjct: 4961251 gtttgtggtgaagatccccggcggggctagcgccggagcaggcggcgccgctgctgtgcg 4961192
Query: 618 ctggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtg 677
| || |||||||||||||||| ||||||||||| ||||||| | || || ||||| |
Sbjct: 4961191 ccgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcg 4961132
Query: 678 gcggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgg 737
||||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 4961131 gcggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatgg 4961072
Query: 738 gccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacc 797
| ||||||||||||||||||||||||||| | | |||||||| ||||| |||||| |||
Sbjct: 4961071 ggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacc 4961012
Query: 798 tcggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgact 857
| ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 4961011 tgggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgact 4960952
Query: 858 cgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgc 917
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 4960951 cgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgc 4960892
Query: 918 tgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcg 977
|||||||||||||||| ||||| | ||| |||| || ||| | |||| |||||||||
Sbjct: 4960891 tgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttca 4960832
Query: 978 tgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcg 1037
| ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 4960831 tctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatgg 4960772
Query: 1038 acgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgagg 1097
|||||| | |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 4960771 ccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgagg 4960712
Query: 1098 tggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgct 1157
| |||||||||| ||||| ||| |||| || ||||| || |||||||||||||||||||
Sbjct: 4960711 tcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgct 4960652
Query: 1158 accgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
||||||||||||||||||||||||| |||||| ||||
Sbjct: 4960651 accgcttcgtcgtcgacgtcgccggcagcaacatcga 4960615
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 4962517 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 4962458
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 4962457 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 4962398
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 4962397 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 4962338
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4962337 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 4962292
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 4963266 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 4963207
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 4963206 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 4963149
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 4964145 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 4964088
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 7665226 gaggcggaggcggcggcggcgg 7665247
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 9343576 gaggcggaggcggcggcggc 9343595
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcgg 1214
||||||||| ||||||||||||||
Sbjct: 8294916 tcgaggcggcggcggcggcggcgg 8294939
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcgg 1214
||||||||| ||||||||||||||
Sbjct: 8292682 tcgaggcggcggcggcggcggcgg 8292705
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 620 bits (313), Expect = e-175
Identities = 557/637 (87%), Gaps = 1/637 (0%)
Strand = Plus / Minus
Query: 559 gtttgtggtgaagatccc-ggcgggtctggctccggagcaagcggcgccgctgctgtgcg 617
|||||||||||||||||| |||||| || || |||||||| |||||||||||||||||||
Sbjct: 4961251 gtttgtggtgaagatccccggcggggctagcgccggagcaggcggcgccgctgctgtgcg 4961192
Query: 618 ctggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtg 677
| || |||||||||||||||| ||||||||||| ||||||| | || || ||||| |
Sbjct: 4961191 ccgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcg 4961132
Query: 678 gcggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgg 737
||||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 4961131 gcggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatgg 4961072
Query: 738 gccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacc 797
| ||||||||||||||||||||||||||| | | |||||||| ||||| |||||| |||
Sbjct: 4961071 ggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacc 4961012
Query: 798 tcggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgact 857
| ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 4961011 tgggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgact 4960952
Query: 858 cgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgc 917
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 4960951 cgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgc 4960892
Query: 918 tgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcg 977
|||||||||||||||| ||||| | ||| |||| || ||| | |||| |||||||||
Sbjct: 4960891 tgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttca 4960832
Query: 978 tgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcg 1037
| ||||||||||||||||| || |||||||||||||| || ||||||||||| ||||| |
Sbjct: 4960831 tctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatgg 4960772
Query: 1038 acgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgagg 1097
|||||| | |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 4960771 ccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgagg 4960712
Query: 1098 tggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgct 1157
| |||||||||| ||||| ||| |||| || ||||| || |||||||||||||||||||
Sbjct: 4960711 tcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgtccgct 4960652
Query: 1158 accgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
||||||||||||||||||||||||| |||||| ||||
Sbjct: 4960651 accgcttcgtcgtcgacgtcgccggcagcaacatcga 4960615
Score = 226 bits (114), Expect = 3e-056
Identities = 198/226 (87%)
Strand = Plus / Minus
Query: 335 gaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgac 394
|||||||||||||||||||||||||||||||| || ||| |||||||| ||| |||||||
Sbjct: 4962517 gaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgac 4962458
Query: 395 gtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaac 454
|| || |||||||| || ||||| || ||||||||||||||| || |||||||||||
Sbjct: 4962457 gtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaat 4962398
Query: 455 gttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacgg 514
|| ||||||||||||||||||| ||| ||||| ||||||||||||||||| || || |||
Sbjct: 4962397 gtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccgg 4962338
Query: 515 cccacgcagggtggattcgcctccaccatggtcgtcgaccagaagt 560
|| || ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4962337 ccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagt 4962292
Score = 107 bits (54), Expect = 2e-020
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 214 caggaacacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac 273
|||||| || || ||||||||||||||||||||||| | || || || |||||||| ||
Sbjct: 4963266 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 4963207
Query: 274 ggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctggg 331
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 4963206 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggg 4963149
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 4964145 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 4964088
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 16990874 ggcggaggcggcggcggcggacgcggcc 16990901
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 25503421 gaggcggaggcggcggcggcgg 25503400
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 7665226 gaggcggaggcggcggcggcgg 7665247
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcg 1213
|||||||||||||||||| ||||||
Sbjct: 35843887 cgtcgaggcggaggcggccgcggcg 35843911
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1162 cttcgtcgtcgacgtcgccgg 1182
|||||||||||||||||||||
Sbjct: 35425440 cttcgtcgtcgacgtcgccgg 35425460
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1197 cggaggcggcggcggcggatgcggc 1221
||||||||||||||||| |||||||
Sbjct: 34680334 cggaggcggcggcggcgcatgcggc 34680310
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 33878860 aggcggaggcggcggcggcgg 33878880
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 29694192 ggcggaggcggcggcggcgga 29694212
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 25402851 ggcggaggcggcggcggcgga 25402831
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 80 gccacccgctccgtcgtcgtcgtc 103
||||||||| ||||||||||||||
Sbjct: 31615036 gccacccgcaccgtcgtcgtcgtc 31615013
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||| || |||||||||
Sbjct: 27907616 ggaggcggcggcggcagaggcggccagc 27907643
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 26431349 ggcggaggcggcggcggcgg 26431330
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 26244100 ggcggaggcggcggcggcgg 26244119
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccg 110
||||||||||||||||||||
Sbjct: 25008698 cgtcgtcgtcgtccccgccg 25008717
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24264534 ggcggaggcggcggcggcgg 24264553
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 830 gccgcggccatggcggcggc 849
||||||||||||||||||||
Sbjct: 23585894 gccgcggccatggcggcggc 23585913
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21207298 ggcggaggcggcggcggcgg 21207279
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 13768725 gcggaggcggcggcggcgga 13768744
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 9343576 gaggcggaggcggcggcggc 9343595
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcgg 1214
||||||||| ||||||||||||||
Sbjct: 8294916 tcgaggcggcggcggcggcggcgg 8294939
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcgg 1214
||||||||| ||||||||||||||
Sbjct: 8292682 tcgaggcggcggcggcggcggcgg 8292705
>gb|AU094574.1|AU094574 AU094574 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11875, mRNA sequence
Length = 661
Score = 561 bits (283), Expect = e-157
Identities = 546/633 (86%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 206 tacaccctcaggaacacaggccctgaagatgtggtggtgaaggtgctc-tactgcgggat 264
|||||| |||| || || || ||||||||||||||||||||||| | || || || ||
Sbjct: 25 tacaccntcagaaagactgggcctgaagatgtggtggtgaaggtttttgtattgtggtat 84
Query: 265 ctgccacacggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatggt 324
|||||| || |||||||||||||||||||||||||| || ||||| ||||| || |||||
Sbjct: 85 ctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggt 144
Query: 325 ccctgggcacgaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacgg 384
|||||| || ||||||||||||||||||||| |||||||||| || ||| |||||||| |
Sbjct: 145 ccctggccatgaggtggtcggcgaggtggtgnaggtcgggccggaggtgaccaagtacag 204
Query: 385 cgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctg 444
|| ||||||||| || |||||||| || ||||| || ||||||||||||||| || ||
Sbjct: 205 cgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtg 264
Query: 445 caaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacac 504
||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 265 caaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctacac 324
Query: 505 tgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagtttgt 564
|| || ||||| || ||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 325 cgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgt 384
Query: 565 ggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggcgt 624
|||||||||||||||||| || || |||||||| |||||||||||||||||||| || |
Sbjct: 385 ggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgccgggct 444
Query: 625 gacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggcat 684
||||||||||||||| ||||||||||| ||||||| | || || ||||| |||||| |
Sbjct: 445 gacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggcggcgt 504
Query: 685 cctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccacca 744
|||||| |||||||||||||| ||||||||||||||||| |||||| | ||||| |||||
Sbjct: 505 cctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggggcacca 564
Query: 745 cgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgc 804
|||||||||||||||||||||| | | |||||||| ||||| |||||| |||| |||||
Sbjct: 565 cgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgc 624
Query: 805 ggacgcgtacctagtgagctcggacgccgcggc 837
||||| ||||| || ||||| ||||| |||||
Sbjct: 625 cgacgcctacctcgtcagctccgacgcggcggc 657
>gb|CA756271.1|CA756271 BR030039000_PLATE_A03_17_019.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030039000_PLATE_A03_17_019.ab1 similar to cinnamyl
alcohol dehydrogenase 2b [Festuca arundinacea], mRNA
sequence
Length = 619
Score = 543 bits (274), Expect = e-152
Identities = 521/604 (86%)
Strand = Plus / Plus
Query: 263 atctgccacacggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatg 322
|||||||| || |||||||||||||||||||||||||| || ||||| ||||| || |||
Sbjct: 16 atctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatg 75
Query: 323 gtccctgggcacgaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
|||||||| || |||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 76 gtccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtac 135
Query: 383 ggcgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccc 442
||| ||||||||| || |||||||| || ||||| || ||||||||||||||| ||
Sbjct: 136 agcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccg 195
Query: 443 tgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctac 502
||||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 196 tgcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctac 255
Query: 503 actgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagttt 562
|| || || ||||| || ||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 256 accgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaagttt 315
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 316 gtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgccggg 375
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
|||||||||||||||| ||||||||||| ||||||| | || || ||||| ||||||
Sbjct: 376 ctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggcggc 435
Query: 683 atcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccac 742
||||||| |||||||||||||| ||||||||||||||||| |||||| | |||| |||
Sbjct: 436 gtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggngcac 495
Query: 743 cacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggc 802
|||||||||||||||||||||||| | | |||||||| ||||| |||||| | || |||
Sbjct: 496 cacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgaactgggc 555
Query: 803 gcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactcgctg 862
|| ||||| ||||| || ||||| ||||| | || |||||| |||| ||||||||||
Sbjct: 556 gccgacgcctacctcgtcagctccgacgcggnggagatggcgagcgccggcgactcgctg 615
Query: 863 gact 866
||||
Sbjct: 616 gact 619
>gb|AU161098.1|AU161098 AU161098 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53458, mRNA sequence
Length = 599
Score = 507 bits (256), Expect = e-141
Identities = 498/575 (86%), Gaps = 3/575 (0%)
Strand = Plus / Plus
Query: 263 atctgccacacggacatccaccaggccaagaaccacctcggggcttcaaagtatcctatg 322
|||||||| || |||||||||||||||||||||||||| || ||||| || || || |||
Sbjct: 24 atctgccatactgacatccaccaggccaagaaccaccttggtgcttccaa-taccccatg 82
Query: 323 gtccctgggcacgaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
|||||||| || |||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 83 gtccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtac 142
Query: 383 ggcgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccc 442
||| ||||||||| || |||||||| || ||||| || ||||||||||||||| ||
Sbjct: 143 agcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccg 202
Query: 443 tgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctac 502
||||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 203 tgcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtctac 262
Query: 503 actgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagttt 562
|| || || ||||| || || || | ||||||||| |||||||||||||||||||||||
Sbjct: 263 accgacggccggccaaccca-ggngcgttcgcctccgccatggtcgtcgaccagaagttt 321
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 322 gtggtgaagatcccggcggg-ctagcgccggagcaggcggcgccgctgctgtgcgccggg 380
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
|||||||||||||||| ||||||||||| ||||||| | || || ||||| ||||||
Sbjct: 381 ctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggcggc 440
Query: 683 atcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccac 742
||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||| |||
Sbjct: 441 gtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggggcac 500
Query: 743 cacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggc 802
|||||||||||||||||||||||| | | |||||||| ||||| |||||| |||| |||
Sbjct: 501 cacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctgggc 560
Query: 803 gcggacgcgtacctagtgagctcggacgccgcggc 837
|| ||||| ||||| || ||||| ||||| |||||
Sbjct: 561 gccgacgcctacctcgtcagctccgacgcggcggc 595
>gb|AU164242.1|AU164242 AU164242 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20885, mRNA sequence
Length = 523
Score = 486 bits (245), Expect = e-134
Identities = 434/497 (87%)
Strand = Plus / Plus
Query: 320 atggtccctgggcacgaggtggtcggcgaggtggtggaggtcgggcccgaagtggccaag 379
||||||||||| || |||||||||||||||||||||||||||||||| || ||| |||||
Sbjct: 3 atggtccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaag 62
Query: 380 tacggcgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagtgcagc 439
||| ||| ||||||||| || |||||||| || ||||| || |||||||||||||||
Sbjct: 63 tacagcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccat 122
Query: 440 ccctgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtc 499
|| ||||||||||| || ||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 123 ccgtgcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacgacgtc 182
Query: 500 tacactgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaag 559
||||| || || ||||| || ||||| || ||||||||| ||||||||||||||||||||
Sbjct: 183 tacaccgacggccggccaacccagggcggcttcgcctccgccatggtcgtcgaccagaag 242
Query: 560 tttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgct 619
||||||||||||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 243 tttgtggtgaagatcccggcggggctagcgccggagcaggcggcgccgctgctgtgcgcc 302
Query: 620 ggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggc 679
|| |||||||||||||||| ||||||||||| ||||||| | || || ||||| |||
Sbjct: 303 gggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggc 362
Query: 680 ggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggc 739
||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |||||
Sbjct: 363 ggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatgggg 422
Query: 740 caccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctc 799
||||||||||||||||||||||||||| | | |||||||| ||||| |||||| ||||
Sbjct: 423 caccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctg 482
Query: 800 ggcgcggacgcgtacct 816
||||| ||||| |||||
Sbjct: 483 ggcgccgacgcctacct 499
>gb|CA755255.1|CA755255 BR030016000_PLATE_E08_61_066.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030016000_PLATE_E08_61_066.ab1 similar to
Cinnamyl-alcohol dehydrogenase (CAD) (Brown-midrib 1
protein) gi|7430939|pir|T02990 cinnamyl-alcohol
dehydrogenase (EC 1.1.1.195) - maize
gi|2239258|emb|CAA74070.1| (Y13733) cinnamyl alcohol
dehydrogenase [Zea mays], mRNA sequence
Length = 606
Score = 468 bits (236), Expect = e-129
Identities = 401/456 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 330 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgt 389
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttga 459
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || ||
Sbjct: 390 cggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtgga 449
Query: 460 gcagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccac 519
||||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 450 gcagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaac 509
Query: 520 gcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggc 579
||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggc 569
Query: 580 gggtctggctccggagcaagcggcgccgctgctgtg 615
||| || || |||||||| |||||||||||||||||
Sbjct: 570 ggggctagcgccggagcaggcggcgccgctgctgtg 605
>dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD mRNA for cinnamyl alcohol
dehydrogenase, partial cds
Length = 653
Score = 452 bits (228), Expect = e-124
Identities = 396/452 (87%)
Strand = Plus / Plus
Query: 743 cacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggc 802
|||||||||||||||||||||||| | | |||||||| ||||| |||||| |||| |||
Sbjct: 1 cacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctgggc 60
Query: 803 gcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgccgactcgctg 862
|| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| ||||||||||
Sbjct: 61 gccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggcgactcgctg 120
Query: 863 gactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctgctg 922
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 gactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctggcgctgctg 180
Query: 923 aagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcg 982
||||||||||| ||||| | ||| |||| || ||| | |||| ||||||||| | |||
Sbjct: 181 aagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagcttcatctcg 240
Query: 983 cccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcgacgag 1042
|||||||||||||| || |||||||||||||| || ||||||||||| ||||| | ||||
Sbjct: 241 cccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagcatggccgag 300
Query: 1043 accgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggtggtc 1102
|| | |||||||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 acggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatcgaggtcgtc 360
Query: 1103 aagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctaccgc 1162
||||||| ||||| ||| |||| || ||||| || ||||||||||||||||||||||||
Sbjct: 361 aagatggactacgtcaaccaggccctcgagcgccttgagcgcaacgacgtccgctaccgc 420
Query: 1163 ttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||| |||||| ||||
Sbjct: 421 ttcgtcgtcgacgtcgccggcagcaacatcga 452
>gb|AU093267.1|AU093267 AU093267 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52516, mRNA sequence
Length = 486
Score = 424 bits (214), Expect = e-116
Identities = 419/485 (86%), Gaps = 3/485 (0%)
Strand = Plus / Plus
Query: 353 gtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtaggcgtcggggtg 412
|||||||||||||| || ||| |||||||| ||| ||||||||| || |||||||| ||
Sbjct: 1 gtggaggtcgggccggaggtgaccaagtacagcgccggcgacgtcgtcggcgtcggcgtc 60
Query: 413 atcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaac 472
||||| || ||||||||||||||| || ||||||||||| || |||||||||||||||
Sbjct: 61 atcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtggagcagtactgcaac 120
Query: 473 aagaagatctggtcatacaacgacgtctacactgatggacggcccacgcagggtggattc 532
|||| ||| ||||| ||||||||||||||||| || || ||||| || ||||| | |||
Sbjct: 121 aagaggatttggtcctacaacgacgtctacaccgacggccggccaacccagggcg--ttc 178
Query: 533 gcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccg 592
|||||| ||||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct: 179 gcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggcggg-ctagcgccg 237
Query: 593 gagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcacttt 652
||||| |||||||||||||||||||| || |||||||||||||||| |||||||||||
Sbjct: 238 gagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagcccactgaagcacttc 297
Query: 653 gggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacatg 712
||||||| | || || ||||| |||||| ||||||| |||||||||||||| ||||||
Sbjct: 298 gggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcggcgtggggcacatg 357
Query: 713 ggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtccaag 772
||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| | | |
Sbjct: 358 ggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcgagg 417
Query: 773 aagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacgcc 832
||||||| ||||| |||||| |||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 418 aagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgtcagctccgacgcg 477
Query: 833 gcggc 837
|||||
Sbjct: 478 gcggc 482
>gb|C99450.2|C99450 C99450 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20051, mRNA sequence
Length = 488
Score = 416 bits (210), Expect = e-113
Identities = 421/489 (86%), Gaps = 2/489 (0%)
Strand = Plus / Plus
Query: 358 ggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtaggcgtcggggtgatcgt 417
||||||||| || ||| |||||||| ||| ||||||||| || |||||||| || |||||
Sbjct: 1 ggtcgggccggaggtgaccaagtacagcgccggcgacgtcgtcggcgtcggcgtcatcgt 60
Query: 418 tgggtgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaacaagaa 477
|| ||||||||||||||| || ||||||||||| || |||||||||||||||||||
Sbjct: 61 cggctgctgccgcgagtgccatccgtgcaaggccaatgtggagcagtactgcaacaagag 120
Query: 478 gatctggtcatacaacgacgtctacactgatggacggcccacgcagggtggattcgcctc 537
||| ||||| ||||||||||||||||| || || ||||| || ||| | | ||||||||
Sbjct: 121 gatttggtcctacaacgacgtctacaccgacggccggccaacccagnggcg-ttcgcctc 179
Query: 538 caccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccggagca 597
| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 180 cgccatggtcgtcgaccagaagtttgtggtgaagatcccggcggg-ctagcgccggagca 238
Query: 598 agcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcactttgggct 657
|||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||
Sbjct: 239 ggcggcgccgctgctgtgcgccgggctgacggtgtacagcccactgaagcacttcgggct 298
Query: 658 gacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacatgggcgt 717
|| | || || ||||| |||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 299 gatgtcgccaggtctccgcggcggcgtcctggggctcggcggcgtggggcacatgggcgt 358
Query: 718 gaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtccaagaagcg 777
|||||| |||||| | ||||| ||||||||||||||||||||||||||| | | ||||||
Sbjct: 359 gaaggtggccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcgaggaagcg 418
Query: 778 cgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacgccgcggc 837
|| ||||| |||||| |||| ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 419 cggcgaggccatggacgacctgggcgccgacgcctacctcgtcagctccgacgcggcggc 478
Query: 838 catggcggc 846
||||||||
Sbjct: 479 gatggcggc 487
>gb|AU096692.1|AU096692 AU096692 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14727, mRNA sequence
Length = 493
Score = 400 bits (202), Expect = e-109
Identities = 418/488 (85%), Gaps = 2/488 (0%)
Strand = Plus / Plus
Query: 350 gtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtaggcgtcggg 409
||||||||||||||||||| |||| |||||||| ||| ||||||||| || ||||||||
Sbjct: 4 gtggtggaggtcgggcccggagtgaccaagtacagcgccggcgacgtcgtcggcgtcggc 63
Query: 410 gtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgc 469
| ||||| || ||||||||||||||| || |||||||| || || ||||| ||||||
Sbjct: 64 ntcatcgtcggctgctgccgcgagtgccatccgtgcaaggcnaatgtggagca-tactgc 122
Query: 470 aacaagaagatctggtcatacaacgacgtctacactgatggacggcccacgcagggtgga 529
||||||| ||| ||||| ||||||||||||||||| || || ||||| || |||| |
Sbjct: 123 aacaagaggatttggtcctacaacgacgtctacaccgacggccggccaacccaggcgcg- 181
Query: 530 ttcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggct 589
||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 182 ttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggccgggctagcg 241
Query: 590 ccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcac 649
|||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 242 ccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagcccactgaagcac 301
Query: 650 tttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccac 709
|| ||||||| | || || ||||| |||||| ||||||| |||||||||||||| |||
Sbjct: 302 ttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcggcgtggggcac 361
Query: 710 atgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtcc 769
|||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| |
Sbjct: 362 atgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcg 421
Query: 770 aagaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggac 829
| |||||||| ||||| |||||| |||| ||||| ||||| ||||| || ||||| |||
Sbjct: 422 aggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgtcagctccgac 481
Query: 830 gccgcggc 837
|| |||||
Sbjct: 482 gcggcggc 489
>gb|AU100927.1|AU100927 AU100927 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53809, mRNA sequence
Length = 468
Score = 396 bits (200), Expect = e-107
Identities = 399/463 (86%), Gaps = 2/463 (0%)
Strand = Plus / Plus
Query: 375 ccaagtacggcgtcggcgacgtggtaggcgtcggggtgatcgttgggtgctgccgcgagt 434
|||||||| ||| ||||||||| || |||||||| || ||||| || |||||||||||||
Sbjct: 4 ccaagtacagcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagt 63
Query: 435 gcagcccctgcaaggccaacgttgagcagtactgcaacaagaagatctggtcatacaacg 494
|| || ||||||||||| || ||||||||||||||||||| ||| ||||| |||||||
Sbjct: 64 gccatccgtgcaaggccaatgtggagcagtactgcaacaagaggatttggtcctacaacg 123
Query: 495 acgtctacactgatggacggcccacgcagggtggattcgcctccaccatggtcgtcgacc 554
|||||||||| || || ||||| || |||| | ||||||||| |||||||||||||||
Sbjct: 124 acgtctacaccgacggccggccaacccaggngcg-ttcgcctccgccatggtcgtcgacc 182
Query: 555 agaagtttgtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgt 614
|||||||||||||||||||||||||||| || || |||||||| ||||||||||||||||
Sbjct: 183 agaagtttgtggtgaagatcccggcggg-ctagcgccggagcaggcggcgccgctgctgt 241
Query: 615 gcgctggcgtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctcc 674
|||| || |||||||||||||||| ||||||||||| ||||||| | || || ||||
Sbjct: 242 gcgccgggctgacggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctcc 301
Query: 675 gtggcggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggcca 734
| |||||| ||||||| |||||||||||||| ||||||||||||||||| |||||| | |
Sbjct: 302 gcggcggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcga 361
Query: 735 tgggccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggacc 794
|||| ||||||||||||||||||||||||||| | | |||||||| ||||| ||||||
Sbjct: 362 tggggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacg 421
Query: 795 acctcggcgcggacgcgtacctagtgagctcggacgccgcggc 837
|||| ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 422 acctgggcgccgacgcctacctcgtcagctccgacgcggcggc 464
>gb|AU197396.1|AU197396 AU197396 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0512, mRNA sequence
Length = 426
Score = 396 bits (200), Expect = e-107
Identities = 362/416 (87%)
Strand = Plus / Plus
Query: 422 tgctgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaacaagaagatc 481
||||||||||||||| || ||||||||||| || ||||||||||||||||||| |||
Sbjct: 7 tgctgccgcgagtgccatccgtgcaaggccaatgtggagcagtactgcaacaagaggatt 66
Query: 482 tggtcatacaacgacgtctacactgatggacggcccacgcagggtggattcgcctccacc 541
||||| ||||||||||||||||| || || ||||| || ||||| || ||||||||| ||
Sbjct: 67 tggtcctacaacgacgtctacaccgacggccggccaacccagggcggcttcgcctccgcc 126
Query: 542 atggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccggagcaagcg 601
||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||
Sbjct: 127 atggtcgtcgaccagaagtttgtggtgaagatcccggcggggctagcgccggagcaggcg 186
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcactttgggctgacg 661
||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||| |
Sbjct: 187 gcgccgctgctgtgcgccgggctgacggtgtacagcccactgaagcacttcgggctgatg 246
Query: 662 aacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacatgggcgtgaag 721
|| || ||||| |||||| ||||||| |||||||||||||| |||||||||||||||
Sbjct: 247 tcgccaggtctccgcggcggcgtcctggggctcggcggcgtggggcacatgggcgtgaag 306
Query: 722 gtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcg 781
|| |||||| | ||||| ||||||||||||||||||||||||||| | | ||||||||
Sbjct: 307 gtggccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggc 366
Query: 782 gaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacgccgcggc 837
||||| |||||| |||| ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 367 gaggccatggacgacctgggcgccgacgcctacctcgtcagctccgacgcggcggc 422
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full
insert sequence
Length = 1091
Score = 373 bits (188), Expect = e-100
Identities = 329/376 (87%)
Strand = Plus / Plus
Query: 734 atgggccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggac 793
||||| ||||||||||||||||||||||||||| | | |||||||| ||||| ||||||
Sbjct: 170 atggggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggac 229
Query: 794 cacctcggcgcggacgcgtacctagtgagctcggacgccgcggccatggcggcggccgcc 853
|||| ||||| ||||| ||||| || ||||| ||||| ||||| |||||||| |||| |
Sbjct: 230 gacctgggcgccgacgcctacctcgtcagctccgacgcggcggcgatggcggccgccggc 289
Query: 854 gactcgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctg 913
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 290 gactcgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacctg 349
Query: 914 gcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagc 973
|||||||||||||||||||| ||||| | ||| |||| || ||| | |||| ||||||
Sbjct: 350 gcgctgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgagc 409
Query: 974 ttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagc 1033
||| | ||||||||||||||||| || |||||||||||||| || ||||||||||| |||
Sbjct: 410 ttcatctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggagc 469
Query: 1034 atcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatc 1093
|| | |||||| | |||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 470 atggccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagatc 529
Query: 1094 gaggtggtcaagatgg 1109
||||| ||||||||||
Sbjct: 530 gaggtcgtcaagatgg 545
Score = 365 bits (184), Expect = 5e-098
Identities = 316/360 (87%)
Strand = Plus / Plus
Query: 401 ggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgttgag 460
|||||||| || ||||| || ||||||||||||||| || ||||||||||| || |||
Sbjct: 554 ggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggccaatgtggag 613
Query: 461 cagtactgcaacaagaagatctggtcatacaacgacgtctacactgatggacggcccacg 520
|||||||||||||||| ||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct: 614 cagtactgcaacaagaggatttggtcctacaacgacgtctacaccgacggccggccaacc 673
Query: 521 cagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcg 580
||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cagggcggcttcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggcg 733
Query: 581 ggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|| || || |||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 734 gggctagcgccggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagccca 793
Query: 641 ctgaagcactttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggc 700
||||||||||| ||||||| | || || ||||| |||||| ||||||| |||||||||
Sbjct: 794 ctgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcggc 853
Query: 701 gtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagc 760
||||| ||||||||||||||||| |||||| | ||||| |||||||||||||||||||||
Sbjct: 854 gtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcagc 913
>gb|AU163932.1|AU163932 AU163932 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11507, mRNA sequence
Length = 541
Score = 369 bits (186), Expect = 3e-099
Identities = 303/342 (88%)
Strand = Plus / Plus
Query: 853 cgactcgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacct 912
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 4 cgactcgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacct 63
Query: 913 ggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgag 972
||||||||||||||||||||| ||||| | ||| |||| || ||| | |||| |||||
Sbjct: 64 ggcgctgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgag 123
Query: 973 cttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcag 1032
|||| | ||||||||||||||||| || |||||||||||||| || ||||||||||| ||
Sbjct: 124 cttcatctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggag 183
Query: 1033 catcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagat 1092
||| | |||||| | |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 184 catggccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagat 243
Query: 1093 cgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgt 1152
|||||| |||||||||| ||||| ||| |||| || ||||| || ||||||||||||||
Sbjct: 244 cgaggtcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgt 303
Query: 1153 ccgctaccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 304 ccgctaccgcttcgtcgtcgacgtcgccggcagcaacatcga 345
>gb|AU164498.1|AU164498 AU164498 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R0118, mRNA sequence
Length = 549
Score = 369 bits (186), Expect = 3e-099
Identities = 303/342 (88%)
Strand = Plus / Plus
Query: 853 cgactcgctggactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacct 912
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 4 cgactcgctggactacatcatcgacaccgtgccggtgcaccacccgctggagccgtacct 63
Query: 913 ggcgctgctgaagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgag 972
||||||||||||||||||||| ||||| | ||| |||| || ||| | |||| |||||
Sbjct: 64 ggcgctgctgaagctggacgggaagctgatcctgatgggggtgatcaaccagccgctgag 123
Query: 973 cttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagcttcatcggcag 1032
|||| | ||||||||||||||||| || |||||||||||||| || ||||||||||| ||
Sbjct: 124 cttcatctcgcccatggtgatgctcggccggaaggccatcaccggcagcttcatcgggag 183
Query: 1033 catcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagat 1092
||| | |||||| | |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 184 catggccgagacggaggaggtgctcaacttctgcgtcgacaaggggctcacctcccagat 243
Query: 1093 cgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgt 1152
|||||| |||||||||| ||||| ||| |||| || ||||| || ||||||||||||||
Sbjct: 244 cgaggtcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagcgcaacgacgt 303
Query: 1153 ccgctaccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 304 ccgctaccgcttcgtcgtcgacgtcgccggcagcaacatcga 345
>gb|AU161892.1|AU161892 AU161892 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6196, mRNA sequence
Length = 415
Score = 367 bits (185), Expect = 1e-098
Identities = 358/413 (86%), Gaps = 2/413 (0%)
Strand = Plus / Plus
Query: 425 tgccgcgagtgcagcccctgcaaggccaacgttgagcagtactgcaacaagaagatctgg 484
|||||||||||| || ||||||||||| || ||||||||||||||||||| ||| |||
Sbjct: 1 tgccgcgagtgccatccgtgcaaggccaatgtggagcagtactgcaacaagaggatttgg 60
Query: 485 tcatacaacgacgtctacactgatggacggcccacgcagggtggattcgcctccaccatg 544
|| ||||||||||||||||| || || ||||| || ||||| | ||||||||| |||||
Sbjct: 61 tcctacaacgacgtctacaccgacggccggccaacccaggggcg-ttcgcctccgccatg 119
Query: 545 gtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctccggagcaagcggcg 604
|||||||||||||||||||||||||||||||||||||| || || |||||||| ||||||
Sbjct: 120 gtcgtcgaccagaagtttgtggtgaagatcccggcggg-ctagcgccggagcaggcggcg 178
Query: 605 ccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcactttgggctgacgaac 664
|||||||||||||| || |||||||||||||||| ||||||||||| ||||||| |
Sbjct: 179 ccgctgctgtgcgccgggctgacggtgtacagcccactgaagcacttcgggctgatgtcg 238
Query: 665 ccgggcctccgtggcggcatcctgggcctcggcggcgtgggccacatgggcgtgaaggta 724
|| || ||||| |||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 239 ccaggtctccgcggcggcgtcctggggctcggcggcgtggggcacatgggcgtgaaggtg 298
Query: 725 gccaaggccatgggccaccacgtgacggtgatcagctcgtcgtccaagaagcgcgcggag 784
|||||| | ||||| ||||||||||||||||||||||||||| | | |||||||| |||
Sbjct: 299 gccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcgaggaagcgcggcgag 358
Query: 785 gcaatggaccacctcggcgcggacgcgtacctagtgagctcggacgccgcggc 837
|| |||||| |||| ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 359 gccatggacgacctgggcgccgacgcctacctcgtcagctccgacgcggcggc 411
>gb|AU101877.1|AU101877 AU101877 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16477, mRNA sequence
Length = 371
Score = 347 bits (175), Expect = 1e-092
Identities = 319/367 (86%)
Strand = Plus / Plus
Query: 471 acaagaagatctggtcatacaacgacgtctacactgatggacggcccacgcagggtggat 530
|||||| ||| ||||| ||||||||||||||||| || || ||||| || ||||| || |
Sbjct: 1 acaagaggatttggtcctacaacgacgtctacaccgacggccggccaacccagggcggct 60
Query: 531 tcgcctccaccatggtcgtcgaccagaagtttgtggtgaagatcccggcgggtctggctc 590
|||||||| ||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 61 tcgcctccgccatggtcgtcgaccagaagtttgtggtgaagatcccggcggggctagcgc 120
Query: 591 cggagcaagcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagcact 650
||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 121 cggagcaggcggcgccgctgctgtgcgccgggctgacggtgtacagcccactgaagcact 180
Query: 651 ttgggctgacgaacccgggcctccgtggcggcatcctgggcctcggcggcgtgggccaca 710
| ||||||| | || || ||||| |||||| ||||||| |||||||||||||| ||||
Sbjct: 181 tcgggctgatgtcgccaggtctccgcggcggcgtcctggggctcggcggcgtggggcaca 240
Query: 711 tgggcgtgaaggtagccaaggccatgggccaccacgtgacggtgatcagctcgtcgtcca 770
||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| | |
Sbjct: 241 tgggcgtgaaggtggccaagtcgatggggcaccacgtgacggtgatcagctcgtcggcga 300
Query: 771 agaagcgcgcggaggcaatggaccacctcggcgcggacgcgtacctagtgagctcggacg 830
|||||||| ||||| |||||| |||| ||||| ||||| ||||| || ||||| ||||
Sbjct: 301 ggaagcgcggcgaggccatggacgacctgggcgccgacgcctacctcgtcagctccgacg 360
Query: 831 ccgcggc 837
| |||||
Sbjct: 361 cggcggc 367
>gb|AU097594.1|AU097594 AU097594 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6492, mRNA sequence
Length = 392
Score = 339 bits (171), Expect = 3e-090
Identities = 333/384 (86%), Gaps = 5/384 (1%)
Strand = Plus / Plus
Query: 448 ggccaacgttgagcagtactgcaacaagaagatctggtcatacaacgacgtctacactga 507
|||||| || ||||||||||||||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 6 ggccaatgtggagcagtactgcaacaagaggat-tggtcctacaacgacgtctacaccga 64
Query: 508 tggacggcccacgcagggtggattcgcctccaccatggtcgtcgaccagaagtttgtggt 567
|| ||||| || ||||| | ||||||||| ||||||||||||||||||||||||||||
Sbjct: 65 cggccggccaacccagggng--ttcgcctccgccatggtcgtcgaccagaagtttgtggt 122
Query: 568 gaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggcgtgac 627
|||||||||||||||| || |||||||| |||||||||||||||||||| || ||||
Sbjct: 123 gaagatcccggcgggta--gcgccggagcaggcggcgccgctgctgtgcgccgggctgac 180
Query: 628 ggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggcatcct 687
|||||||||||| ||||||||||| ||||||| | || || ||||| |||||| ||||
Sbjct: 181 ggtgtacagcccactgaagcacttcgggctgatgtcgccaggtctccgcggcggcgtcct 240
Query: 688 gggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggccatgggccaccacgt 747
||| |||||||||||||| ||||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 241 ggggctcggcggcgtggggcacatgggcgtgaaggtggccaagtcgatggggcaccacgt 300
Query: 748 gacggtgatcagctcgtcgtccaagaagcgcgcggaggcaatggaccacctcggcgcgga 807
||||||||||||||||||| | | |||||||| ||||| |||||| |||| ||||| ||
Sbjct: 301 gacggtgatcagctcgtcggcgaggaagcgcggcgaggccatggacgacctgggcgccga 360
Query: 808 cgcgtacctagtgagctcggacgc 831
||| ||||| || ||||| |||||
Sbjct: 361 cgcctacctcgtcagctccgacgc 384
>gb|D48938.1|D48938 RICS15522A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 478
Score = 264 bits (133), Expect = 1e-067
Identities = 239/275 (86%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| ||| ||||||||| ||
Sbjct: 330 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgncggcgacgttgt 389
Query: 400 aggcgtcggggtgatcgttgggtgctgccgcgagt 434
|||||||| || ||||| || |||| |||||||
Sbjct: 390 cggcgtcggcgtcatcgtcggctgcttncgcgagt 424
>gb|C20345.1|C20345 C20345 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11875_1A, mRNA sequence
Length = 460
Score = 256 bits (129), Expect = 3e-065
Identities = 225/258 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| | | ||||||||| ||
Sbjct: 330 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagngncggcgacgtcgt 389
Query: 400 aggcgtcggggtgatcgt 417
|||||||| || |||||
Sbjct: 390 nggcgtcggcgtcatcgt 407
>gb|AU161891.1|AU161891 AU161891 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6196, mRNA sequence
Length = 401
Score = 248 bits (125), Expect = 8e-063
Identities = 219/249 (87%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||| ||| |||| |||||||| ||| ||||||||| ||
Sbjct: 330 ggtcggcgaggtggtggaggtcggg-ccggagtgaccaagtacagcgccggcgacgtcgt 388
Query: 400 aggcgtcgg 408
||||||||
Sbjct: 389 cggcgtcgg 397
>gb|D39349.1|D39349 RICR3383A Rice root Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 406
Score = 244 bits (123), Expect = 1e-061
Identities = 215/246 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 155 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 214
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 215 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 274
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 275 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggncatgaggt 334
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399
||||||||||||||||||||||||||| || ||| |||||||| | | ||||||||| ||
Sbjct: 335 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagtgccggcgacgtcgt 394
Query: 400 aggcgt 405
|||||
Sbjct: 395 cggcgt 400
>gb|CB682900.1|CB682900 OSJNEf10K22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10K22 5', mRNA sequence
Length = 412
Score = 238 bits (120), Expect = 7e-060
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 963 agcccctgagcttcgtgtcgcccatggtgatgctggggcggaaggccatcacggggagct 1022
|||| |||| |||| | ||||||||||||||||| || |||||||||||||| || ||||
Sbjct: 6 agccgctgaccttcatctcgcccatggtgatgctcggccggaaggccatcaccggcagct 65
Query: 1023 tcatcggcagcatcgacgagaccgctgaggtgcttcagttctgcgtcgacaaggggctca 1082
||||||| ||||| | |||||| | |||||||| | ||||||||||||||||||||||
Sbjct: 66 tcatcgggagcatggccgagacggaggaggtgctcaacttctgcgtcgacaaggggctca 125
Query: 1083 cctcccagatcgaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagc 1142
|||||||||||||||| |||||||||| ||||| ||| |||| || ||||| || ||||
Sbjct: 126 cctcccagatcgaggtcgtcaagatggactacgtcaaccaggccctcgagcgcctcgagc 185
Query: 1143 gcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
|||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 186 gcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggcagcaacatcga 237
>gb|AU097593.1|AU097593 AU097593 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6492, mRNA sequence
Length = 410
Score = 236 bits (119), Expect = 3e-059
Identities = 207/237 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 155 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 214
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 215 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 274
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 275 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 334
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgt 396
||||||||||||||||||||||||| | || ||| |||||||| | | |||||||||
Sbjct: 335 ggtcggcgaggtggtggaggtcgggncggaggtgaccaagtacagtgncggcgacgt 391
>gb|AU062947.2|AU062947 AU062947 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51811, mRNA sequence
Length = 377
Score = 236 bits (119), Expect = 3e-059
Identities = 197/223 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 330 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtac 372
>gb|D49248.1|D49248 RICS16393A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 374
Score = 232 bits (117), Expect = 4e-058
Identities = 196/223 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggncatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
||||||||||||||||||||| ||||| || ||| ||||||||
Sbjct: 330 ggtcggcgaggtggtggaggtngggccggaggtgaccaagtac 372
>gb|AU100926.1|AU100926 AU100926 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53809, mRNA sequence
Length = 455
Score = 232 bits (117), Expect = 4e-058
Identities = 196/223 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 149 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 208
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 209 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 268
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
|||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 269 ncaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggncatgaggt 328
Query: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtac 382
||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 329 ggtcggcgaggtggtggaggtcgggccggaggtgaccaagtac 371
>gb|D23884.1|D23884 RICR0512A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0512_1A, mRNA sequence
Length = 357
Score = 228 bits (115), Expect = 7e-057
Identities = 184/207 (88%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339
||||||||||||||||||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccctggccatgaggt 329
Query: 340 ggtcggcgaggtggtggaggtcgggcc 366
|||||||||||||||||||||||||||
Sbjct: 330 ggtcggcgaggtggtggaggtcgggcc 356
>gb|D40685.1|D40685 RICS2794A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 372
Score = 220 bits (111), Expect = 2e-054
Identities = 196/223 (87%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggggc-ttcaaagtatcctatggtccctgggcacgagg 338
||||||||||||||||||||| || || ||| ||||| || ||||||||||| || ||||
Sbjct: 270 ccaccaggccaagaaccaccttggtgctttccaagtaccccatggtccctggccatgagg 329
Query: 339 tggtcggcgaggtggtggaggtcgggcccgaagtggccaagta 381
|||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 330 tggtcggcgaggtggtggaggtcgggccggaggtgaccaagta 372
>gb|AU163144.1|AU163144 AU163144 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S16528, mRNA sequence
Length = 248
Score = 206 bits (104), Expect = 3e-050
Identities = 209/243 (86%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 863 gactacatcatcgacacggtgcccgtgcaccacccgctggagccgtacctggcgctgctg 922
||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8 gactacatcatcgncaccgtgccggtgcaccacccgctggagccgtacctggcgctgctg 67
Query: 923 aagctggacggcaagctcgtgctgctgggcgtcatcggcgagcccctgagcttcgtgtcg 982
|||||||| || ||||| | ||| |||| || ||| | |||| ||||||||| | |||
Sbjct: 68 aagctggangggaagctgatcctgatgggggtgatcaaccagccgctgagcttcatctcg 127
Query: 983 cccatggtgatgctggggcggaaggccatcacggggagcttcatcggcagcatcgacgag 1042
|||||||||||||| || ||||||| ||||| || ||||||||||| ||||| | ||||
Sbjct: 128 cccatggtgatgctcggccggaagg-catcancggnagcttcatcgggagcatggncgag 186
Query: 1043 accgctgaggtgcttcagttctgcgtcgacaaggggctcacctcccagatcgaggtggtc 1102
|| | |||||| | | |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 acggaggaggtg-tcaacttctgcgtcgacaaggggctcacctcccagatcgaggtcgtc 245
Query: 1103 aag 1105
|||
Sbjct: 246 aag 248
>gb|AU181410.1|AU181410 AU181410 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C12478, mRNA sequence
Length = 409
Score = 182 bits (92), Expect = 4e-043
Identities = 211/247 (85%), Gaps = 4/247 (1%)
Strand = Plus / Plus
Query: 165 gggccgccagggacgcc-accggacacctctccccctactcctacaccctcaggaacaca 223
||||||||||||||||| |||| |||||| |||||||| ||||||||||| ||| ||
Sbjct: 161 gggccgccagggacgcctnccggccacctcaccccctacaactacaccctcangaagact 220
Query: 224 gg-ccctgaagatgtggtggtgaaggtgctctactgcgggatctg-ccacacggacatcc 281
|| ||||||||||||||||||||| || | || || || ||||| ||| || |||||||
Sbjct: 221 gggccctgaagatgtggtggtgaangttttgtattgtggtatctggccatactgacatcc 280
Query: 282 accaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggtgg 341
||||||||||||||||||| || ||||| ||||| || ||||||||||| || || ||||
Sbjct: 281 accaggccaagaaccaccttggtgcttccaagtaccc-atggtccctggccatgangtgg 339
Query: 342 tcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggtag 401
|||||||||||||||||||||| || || ||| |||||||| ||| ||||||||| || |
Sbjct: 340 tcggcgaggtggtggaggtcggnccggaggtgaccaagtacagcgccggcgacgtcgtcg 399
Query: 402 gcgtcgg 408
|||||||
Sbjct: 400 gcgtcgg 406
>gb|D49206.2|D49206 RICS16319A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 281
Score = 165 bits (83), Expect = 9e-038
Identities = 146/167 (87%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 115 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 174
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 175 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 234
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtcc 326
||||||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 235 ccaccaggccaagaaccaccttggtgcttccaagtaccccatggtcc 281
>gb|AU161099.1|AU161099 AU161099 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53458, mRNA sequence
Length = 353
Score = 163 bits (82), Expect = 3e-037
Identities = 163/190 (85%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
||||||||||||||| ||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagnaacgcctccggncacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 210 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 269
Query: 280 ccaccaggccaagaaccacctcggg-gcttcaaagtatcctatggtccctgggcacgagg 338
||||||| |||||||||||| ||| ||||| ||||| || ||||||||||| || ||||
Sbjct: 270 ncaccaggncaagaaccaccttgggtgcttccaagtaccccatggtccctggccatgagg 329
Query: 339 tggtcggcga 348
||||||||||
Sbjct: 330 tggtcggcga 339
>gb|AU032926.1|AU032926 AU032926 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S16528_5Z, mRNA sequence
Length = 378
Score = 159 bits (80), Expect = 5e-036
Identities = 121/134 (90%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 1061 ttctgcgtcgacaaggggctcacctcccagatcgaggtggtcaagatggggtacgtgaac 1120
||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 41 ttctgcgtcnacaaggggctcacctcccagatcgaggtcgtcaagatgga-tacgtcaac 99
Query: 1121 gaggcgctggagcggctggagcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgcc 1180
|||| || ||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 caggccctcgagcgcctcgagcgcaacgncgtccgctaccgcttcgtcgtcgacgtcgcc 159
Query: 1181 ggtagcaacgtcga 1194
|| |||||| ||||
Sbjct: 160 ggcagcaacatcga 173
>gb|D40585.1|D40585 RICS2657A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 342
Score = 143 bits (72), Expect = 3e-031
Identities = 162/193 (83%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgcctccggncacctcaccccctacaactacaccctcaggaa 209
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac-ggaca 278
|| || ||||||||||| ||||| ||||| | || | || |||| ||| || ||||
Sbjct: 210 gactgggcctgaagatgtagtggtnaaggttttgtattntggtatctnccatacttgaca 269
Query: 279 tccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgagg 338
||||||||| |||||||||||| || ||||| ||||| || ||||| | ||| || ||||
Sbjct: 270 tccaccaggncaagaaccaccttggtgcttccaagtaccccatggttcntggncatgagg 329
Query: 339 tggtcggcgaggt 351
|||||||||||||
Sbjct: 330 tggtcggcgaggt 342
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from
chromosome 11 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 130544
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 45574 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 45633
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 45634 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 45693
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 45694 atcctggggctcggtggcgtggg 45716
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 45716 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 45756
>ref|NT_107112.1| Oryza sativa (japonica cultivar-group)
Length = 403163
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 84971 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 84912
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 84911 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 84852
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 84851 atcctggggctcggtggcgtggg 84829
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 84829 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 84789
>gb|AACV01022232.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022232, whole
genome shotgun sequence
Length = 81379
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 59376 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 59317
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 59316 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 59257
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 59256 atcctggggctcggtggcgtggg 59234
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 59234 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 59194
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094
genomic scaffold, whole genome shotgun sequence
Length = 4775249
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 256057 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 255998
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 255997 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 255938
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 255937 atcctggggctcggtggcgtggg 255915
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 255915 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 255875
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2610869 ggcggaggcggcggcggcgg 2610850
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome
shotgun sequence
Length = 22593549
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 558349 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 558290
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 558289 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 558230
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 558229 atcctggggctcggtggcgtggg 558207
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 558207 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 558167
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcggat 1216
|||||||||||| |||||||||||||
Sbjct: 21323760 tcgaggcggaggtggcggcggcggat 21323785
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcggat 1216
|||||||||||| |||||||||||||
Sbjct: 21323395 tcgaggcggaggtggcggcggcggat 21323420
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 7085564 aggcggaggcggcggcggcgga 7085585
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 9545525 ggcggaggcggcggcggcgga 9545545
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 9400726 ggcggaggcggcggcggcgga 9400746
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||||||||| |||||||||
Sbjct: 16870275 cgaggcggaggcggaggcggcgga 16870298
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5692497 ggcggaggcggcggcggcgg 5692516
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2913161 ggcggaggcggcggcggcgg 2913142
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
complete sequence
Length = 28386948
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 524738 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 524679
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 524678 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 524619
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 524618 atcctggggctcggtggcgtggg 524596
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 524596 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 524556
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcggat 1216
|||||||||||| |||||||||||||
Sbjct: 25649562 tcgaggcggaggtggcggcggcggat 25649587
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 7571390 aggcggaggcggcggcggcgga 7571411
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggcc 1222
||||||||||||||||||||||
Sbjct: 2428682 ggcggcggcggcggatgcggcc 2428661
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1200 aggcggcggcggcggatgcgg 1220
|||||||||||||||||||||
Sbjct: 25038618 aggcggcggcggcggatgcgg 25038598
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 10555258 ggcggaggcggcggcggcgga 10555278
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 2322479 gaggcggaggcggcggcggcg 2322459
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 27890553 gaggcggaggcggcggcggc 27890534
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||||||||| |||||||||
Sbjct: 19884398 cgaggcggaggcggaggcggcgga 19884421
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 7318489 cgaggcggaggcggcggcgg 7318508
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5860059 ggcggaggcggcggcggcgg 5860078
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2777143 ggcggaggcggcggcggcgg 2777124
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 133 bits (67), Expect = 3e-028
Identities = 124/143 (86%)
Strand = Plus / Minus
Query: 563 gtggtgaagatcccggcgggtctggctccggagcaagcggcgccgctgctgtgcgctggc 622
|||||||| ||||||||| | || || |||||||| ||||||||||| || ||||| |||
Sbjct: 524738 gtggtgaaaatcccggcgaggctagcgccggagcaggcggcgccgctactatgcgccggc 524679
Query: 623 gtgacggtgtacagcccgctgaagcactttgggctgacgaacccgggcctccgtggcggc 682
||||||||||||||||| ||||||||||| ||||||| | ||||| ||||| ||||||
Sbjct: 524678 gtgacggtgtacagcccactgaagcacttcgggctgatgttgccggggctccgcggcggc 524619
Query: 683 atcctgggcctcggcggcgtggg 705
|||||||| ||||| ||||||||
Sbjct: 524618 atcctggggctcggtggcgtggg 524596
Score = 65.9 bits (33), Expect = 6e-008
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1134 ggctggagcgcaacgacgtccgctaccgcttcgtcgtcgac 1174
|||| |||||||||||||||| |||||||||||||||||||
Sbjct: 524596 ggctcgagcgcaacgacgtccactaccgcttcgtcgtcgac 524556
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1191 tcgaggcggaggcggcggcggcggat 1216
|||||||||||| |||||||||||||
Sbjct: 25968232 tcgaggcggaggtggcggcggcggat 25968257
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 7641477 aggcggaggcggcggcggcgga 7641498
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggcc 1222
||||||||||||||||||||||
Sbjct: 2436418 ggcggcggcggcggatgcggcc 2436397
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1200 aggcggcggcggcggatgcgg 1220
|||||||||||||||||||||
Sbjct: 25350208 aggcggcggcggcggatgcgg 25350188
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 10626802 ggcggaggcggcggcggcgga 10626822
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 2330260 gaggcggaggcggcggcggcg 2330240
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 27914541 gaggcggaggcggcggcggc 27914522
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||||||||| |||||||||
Sbjct: 20169371 cgaggcggaggcggaggcggcgga 20169394
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 7388575 cgaggcggaggcggcggcgg 7388594
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5926536 ggcggaggcggcggcggcgg 5926555
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2786174 ggcggaggcggcggcggcgg 2786155
>gb|AU183643.1|AU183643 AU183643 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20051, mRNA sequence
Length = 316
Score = 131 bits (66), Expect = 1e-027
Identities = 144/168 (85%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||| ||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 151 cgggtgggccgccagg-acgcctccgg-cacctcaccccctacaactacaccctcaggaa 208
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 209 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 268
Query: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccc 327
|||||||| |||||||||||| || |||| ||||| || ||||||||
Sbjct: 269 ccaccaggncaagaaccaccttggtgcttncaagtaccccatggtccc 316
>gb|C27657.2|C27657 C27657 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52516_2A, mRNA sequence
Length = 295
Score = 117 bits (59), Expect = 2e-023
Identities = 122/141 (86%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||
Sbjct: 154 cgggtgggccgccagg-acgcctncgg-cacctcaccccctacaactacaccctcaggaa 211
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279
|| || ||||||||||||||||||||||| | || || || |||||||| || |||||
Sbjct: 212 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatactgacat 271
Query: 280 ccaccaggccaagaaccacct 300
|||||| ||||||||||||||
Sbjct: 272 ccaccangccaagaaccacct 292
>gb|C99609.1|C99609 C99609 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20878_1Z, mRNA sequence
Length = 430
Score = 113 bits (57), Expect = 3e-022
Identities = 114/131 (87%), Gaps = 2/131 (1%)
Strand = Plus / Plus
Query: 1066 cgtcgacaaggggctcacctcccag-atcgaggtggtcaagatggggtacgtgaacgagg 1124
|||||| ||||||||||||||| || |||||||| |||||||||| ||||| ||| |||
Sbjct: 86 cgtcganaaggggctcacctccaaggatcgaggtcgtcaagatggactacgtcaaccagg 145
Query: 1125 cgctggagcggctgga-gcgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggt 1183
| || || || || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ccctcgaacgcctcgaancgcaacgacgtccgctaccgcttcgtcgtcgacgtcgccggc 205
Query: 1184 agcaacgtcga 1194
|||||| ||||
Sbjct: 206 agcaacatcga 216
>gb|D49279.2|D49279 RICS16477A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 283
Score = 107 bits (54), Expect = 2e-020
Identities = 120/142 (84%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||| | |||| ||||| |||||||| || |||||||||||
Sbjct: 114 cgggtgggccgccagggacgnctccggccacctnaccccctacaantanaccctcaggaa 173
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac-ggaca 278
|| || ||||||||||||||||||||||| | || || || |||||||| || ||||
Sbjct: 174 gactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatacttgaca 233
Query: 279 tccaccaggccaagaaccacct 300
||||||||| ||||||||||||
Sbjct: 234 tccaccagggcaagaaccacct 255
>gb|D40580.1|D40580 RICS2652A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 317
Score = 93.7 bits (47), Expect = 3e-016
Identities = 115/139 (82%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||| | |||| |||||| |||||||| ||||||||| |||||
Sbjct: 151 cgggtgggccgccagggacgnctccggccacctcaccccctacaactacaccctnaggaa 210
Query: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacac-ggaca 278
|| || ||||||||||| ||||| ||||| | || || || |||| ||| || |||||
Sbjct: 211 gactgggcctgaagatgtngtggtnaaggttttgtattgtggtatctnccatactggaca 270
Query: 279 tccaccaggccaagaacca 297
| ||||||| ||||| |||
Sbjct: 271 tncaccaggncaagancca 289
>gb|AU183147.1|AU183147 AU183147 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50070, mRNA sequence
Length = 230
Score = 85.7 bits (43), Expect = 6e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||
Sbjct: 156 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcaggaa 215
Query: 220 cacaggccctgaaga 234
|| || ||||||||
Sbjct: 216 gactgggcctgaaga 230
>gb|AU064324.1|AU064324 AU064324 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20885_1A, mRNA sequence
Length = 376
Score = 83.8 bits (42), Expect = 3e-013
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctac-tcctacaccctcagga 218
|||||||||||||||||||||| |||| |||||| |||||||| | |||||||||||||
Sbjct: 151 cgggtgggccgccagggacgcctccggccacctcaccccctacaacttacaccctcagga 210
Query: 219 acac--aggccctgaagatgtggtggtgaaggt 249
| || |||| |||||||||||||||||||||
Sbjct: 211 agacttgggccttgaagatgtggtggtgaaggt 243
Score = 77.8 bits (39), Expect = 2e-011
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 278 atccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgag 337
|||||||||| ||||||||| || || | ||| ||||| || ||||||||||| || |||
Sbjct: 276 atccaccagggcaagaaccancttggtgtttccaagtaccccatggtccctgg-catgag 334
Query: 338 gtggtcggcgaggtggtggaggtcgggcc 366
|||||||||||||| || |||||||||||
Sbjct: 335 gtggtcggcgaggtngttgaggtcgggcc 363
>gb|CB642809.1|CB642809 OSJNEb03C24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03C24 3', mRNA sequence
Length = 817
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 435 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 376
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 375 cgctaccgcttcgtcatcgacgtcgccggcagca 342
>gb|CB648808.1|CB648808 OSJNEb12G05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12G05 3', mRNA sequence
Length = 743
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 318 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 259
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 258 cgctaccgcttcgtcatcgacgtcgccggcagca 225
>gb|CB648870.1|CB648870 OSJNEb12H19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H19 3', mRNA sequence
Length = 544
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 224 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 165
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 164 cgctaccgcttcgtcatcgacgtcgccggcagca 131
>gb|CB654179.1|CB654179 OSJNEc05O24.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05O24 3', mRNA sequence
Length = 724
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 316 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 257
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 256 cgctaccgcttcgtcatcgacgtcgccggcagca 223
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full
insert sequence
Length = 1084
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 125 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 66
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 65 cgctaccgcttcgtcatcgacgtcgccggcagca 32
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 579
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 974 aaggtgctctactgcggcatctgccacac 946
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0650H04
Length = 134533
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 35013 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 34954
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 34953 cgctaccgcttcgtcatcgacgtcgccggcagca 34920
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 49863 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 49904
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 43568 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 43609
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 35508 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 35467
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 44070 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 44129
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 44130 gcttcgtcatcgacgttgccggcagca 44156
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 31630 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 31593
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 50421 taccgcttcgtcgtcgacgtcgccgg 50446
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 43205 aaggtgctctactgcggcatctgccacac 43233
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 35862 aaggtgctctactgcggcatctgccacac 35834
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 31072 taccgcttcgtcatcgacgtcgccgg 31047
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 50010 gtgacggtgatcagctcgtcg 50030
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 49509 aaggtgctctactgtggcatctgccacac 49537
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 31984 aaggtgctctactgcggcatctgtcacac 31956
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 31483 gtgacggtgatcagctcgtcg 31463
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0435D08
Length = 148912
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 86216 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 86157
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 86156 cgctaccgcttcgtcatcgacgtcgccggcagca 86123
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 101066 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 101107
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 94771 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 94812
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 86711 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 86670
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 95273 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 95332
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 95333 gcttcgtcatcgacgttgccggcagca 95359
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 82833 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 82796
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 101624 taccgcttcgtcgtcgacgtcgccgg 101649
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 94408 aaggtgctctactgcggcatctgccacac 94436
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 87065 aaggtgctctactgcggcatctgccacac 87037
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 82275 taccgcttcgtcatcgacgtcgccgg 82250
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 101213 gtgacggtgatcagctcgtcg 101233
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 100712 aaggtgctctactgtggcatctgccacac 100740
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 83187 aaggtgctctactgcggcatctgtcacac 83159
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 82686 gtgacggtgatcagctcgtcg 82666
>gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019921, whole
genome shotgun sequence
Length = 37159
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 7101 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 7042
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 7041 cgctaccgcttcgtcatcgacgtcgccggcagca 7008
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 21960 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 22001
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 15665 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 15706
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7596 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 7555
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 16167 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 16226
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 16227 gcttcgtcatcgacgttgccggcagca 16253
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 3718 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 3681
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 22518 taccgcttcgtcgtcgacgtcgccgg 22543
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 15302 aaggtgctctactgcggcatctgccacac 15330
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 7950 aaggtgctctactgcggcatctgccacac 7922
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 3158 taccgcttcgtcatcgacgtcgccgg 3133
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 22107 gtgacggtgatcagctcgtcg 22127
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 21606 aaggtgctctactgtggcatctgccacac 21634
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 4072 aaggtgctctactgcggcatctgtcacac 4044
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 3571 gtgacggtgatcagctcgtcg 3551
>ref|NT_107083.1| Oryza sativa (japonica cultivar-group)
Length = 598321
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 380525 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 380466
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 380465 cgctaccgcttcgtcatcgacgtcgccggcagca 380432
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395375 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 395416
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 389080 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 389121
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381020 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 380979
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 389582 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 389641
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 389642 gcttcgtcatcgacgttgccggcagca 389668
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 377142 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 377105
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 395933 taccgcttcgtcgtcgacgtcgccgg 395958
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 388717 aaggtgctctactgcggcatctgccacac 388745
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 381374 aaggtgctctactgcggcatctgccacac 381346
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 376584 taccgcttcgtcatcgacgtcgccgg 376559
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 395522 gtgacggtgatcagctcgtcg 395542
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 395021 aaggtgctctactgtggcatctgccacac 395049
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 377496 aaggtgctctactgcggcatctgtcacac 377468
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 376995 gtgacggtgatcagctcgtcg 376975
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 3325787 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 3325728
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 3325727 cgctaccgcttcgtcatcgacgtcgccggcagca 3325694
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3340646 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 3340687
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3334351 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 3334392
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3326282 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 3326241
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 3334853 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 3334912
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 3334913 gcttcgtcatcgacgttgccggcagca 3334939
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 3322404 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 3322367
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 3341204 taccgcttcgtcgtcgacgtcgccgg 3341229
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 3333988 aaggtgctctactgcggcatctgccacac 3334016
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 3326636 aaggtgctctactgcggcatctgccacac 3326608
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 3321844 taccgcttcgtcatcgacgtcgccgg 3321819
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 3340793 gtgacggtgatcagctcgtcg 3340813
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 3340292 aaggtgctctactgtggcatctgccacac 3340320
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 3322758 aaggtgctctactgcggcatctgtcacac 3322730
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 3322257 gtgacggtgatcagctcgtcg 3322237
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 1601052 gaggcggaggcggcggcggcg 1601032
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1190 gtcgaggcggaggcggcggcggcg 1213
|||| |||||||||||||||||||
Sbjct: 7782153 gtcgcggcggaggcggcggcggcg 7782130
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 12799598 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 12799539
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 12799538 cgctaccgcttcgtcatcgacgtcgccggcagca 12799505
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12814457 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 12814498
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12808162 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 12808203
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12800093 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 12800052
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 12808664 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 12808723
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 12808724 gcttcgtcatcgacgttgccggcagca 12808750
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 12796215 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 12796178
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 12815015 taccgcttcgtcgtcgacgtcgccgg 12815040
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 12807799 aaggtgctctactgcggcatctgccacac 12807827
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 12800447 aaggtgctctactgcggcatctgccacac 12800419
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 12795655 taccgcttcgtcatcgacgtcgccgg 12795630
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcgg 1214
||||||||||| ||||||||||||||
Sbjct: 6201215 cgtcgaggcggcggcggcggcggcgg 6201240
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2202208 gaggcggaggcggcggcggcgg 2202187
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 12814604 gtgacggtgatcagctcgtcg 12814624
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 12814103 aaggtgctctactgtggcatctgccacac 12814131
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 12796569 aaggtgctctactgcggcatctgtcacac 12796541
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 12796068 gtgacggtgatcagctcgtcg 12796048
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 11074863 gaggcggaggcggcggcggcg 11074843
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1190 gtcgaggcggaggcggcggcggcg 1213
|||| |||||||||||||||||||
Sbjct: 17255964 gtcgcggcggaggcggcggcggcg 17255941
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6359494 ggcggaggcggcggcggcgg 6359513
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6347815 ggcggaggcggcggcggcgg 6347834
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5362930 ggcggaggcggcggcggcgg 5362949
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 83.8 bits (42), Expect = 3e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||
Sbjct: 13932539 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtc 13932480
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||||||||||||| ||||||||||||| ||||
Sbjct: 13932479 cgctaccgcttcgtcatcgacgtcgccggcagca 13932446
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13947389 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 13947430
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13941094 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 13941135
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13933034 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 13932993
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 13941596 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 13941655
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 13941656 gcttcgtcatcgacgttgccggcagca 13941682
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 13929156 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 13929119
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 13947947 taccgcttcgtcgtcgacgtcgccgg 13947972
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 13940731 aaggtgctctactgcggcatctgccacac 13940759
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 13933388 aaggtgctctactgcggcatctgccacac 13933360
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 13928598 taccgcttcgtcatcgacgtcgccgg 13928573
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcgg 1214
||||||||||| ||||||||||||||
Sbjct: 7171425 cgtcgaggcggcggcggcggcggcgg 7171450
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2632559 gaggcggaggcggcggcggcgg 2632538
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 13947536 gtgacggtgatcagctcgtcg 13947556
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 13947035 aaggtgctctactgtggcatctgccacac 13947063
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 13929510 aaggtgctctactgcggcatctgtcacac 13929482
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 13929009 gtgacggtgatcagctcgtcg 13928989
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 12211748 gaggcggaggcggcggcggcg 12211728
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 7297608 ggcggaggcggcggcggcgg 7297627
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 7285933 ggcggaggcggcggcggcgg 7285952
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6316768 ggcggaggcggcggcggcgg 6316787
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full
insert sequence
Length = 2015
Score = 77.8 bits (39), Expect = 2e-011
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||||||||||||||
Sbjct: 211 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgacgtccgctacc 152
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 151 gcttcgtcatcgacgttgccggcagca 125
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 713 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 672
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 1076 aaggtgctctactgcggcatctgccacac 1048
>gb|AQ856356.1|AQ856356 nbeb0001N08f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0001N08f, DNA sequence
Length = 468
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 194 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 251
>gb|AQ856777.1|AQ856777 nbeb0004K05f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0004K05f, DNA sequence
Length = 861
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 205 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 262
>gb|AZ127071.1|AZ127071 OSJNBb0083C09f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0083C09f, DNA
sequence
Length = 799
Score = 75.8 bits (38), Expect = 6e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcagg 217
|||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||
Sbjct: 190 cgggtgggccgccagggacgcctccggccacctcaccccctacaactacaccctcagg 247
>gb|CB642808.1|CB642808 OSJNEb03C24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03C24 5', mRNA sequence
Length = 764
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 596 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 637
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 242 aaggtgctctactgcggcatctgccacac 270
>gb|CB646344.1|CB646344 OSJNEb08M02.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08M02 5', mRNA sequence
Length = 779
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 612 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 653
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 249 aaggtgctctactgcggcatctgccacac 277
>gb|CB646877.1|CB646877 OSJNEb09J03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09J03 5', mRNA sequence
Length = 778
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 605 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 646
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 242 aaggtgctctactgcggcatctgccacac 270
>gb|CB648706.1|CB648706 OSJNEb12D16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12D16 5', mRNA sequence
Length = 751
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 701 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 660
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 199 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 140
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 139 gcttcgtcatcgacgttgccggcagca 113
>gb|CB648869.1|CB648869 OSJNEb12H19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H19 5', mRNA sequence
Length = 683
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 611 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 652
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 257 aaggtgctctactgcggcatctgccacac 285
>gb|CB649072.1|CB649072 OSJNEb12M23.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12M23 5', mRNA sequence
Length = 797
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 607 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 648
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 244 aaggtgctctactgcggcatctgccacac 272
>gb|CB649137.1|CB649137 OSJNEb12O16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12O16 5', mRNA sequence
Length = 714
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 548
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 654 gtgacggtgatcagctcgtcg 674
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 153 aaggtgctctactgtggcatctgccacac 181
>gb|CB655787.1|CB655787 OSJNEc09I09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I09 5', mRNA sequence
Length = 796
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 398 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 439
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 35 aaggtgctctactgcggcatctgccacac 63
>gb|CB655789.1|CB655789 OSJNEc09I13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I13 5', mRNA sequence
Length = 770
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 513 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 554
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 660 gtgacggtgatcagctcgtcg 680
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 159 aaggtgctctactgtggcatctgccacac 187
>gb|CB657549.1|CB657549 OSJNEc12P22.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12P22 5', mRNA sequence
Length = 799
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 342 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 383
>gb|CB665926.1|CB665926 OSJNEd12J17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12J17 5', mRNA sequence
Length = 718
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 246
>gb|CB665965.1|CB665965 OSJNEd12K13.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12K13 5', mRNA sequence
Length = 793
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 603 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 644
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 249 aaggtgctctactgcggcatctgccacac 277
>gb|CB674810.1|CB674810 OSJNEe10A24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10A24 5', mRNA sequence
Length = 755
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 597 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 638
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 234 aaggtgctctactgcggcatctgccacac 262
>gb|CB674812.1|CB674812 OSJNEe10B01.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10B01 5', mRNA sequence
Length = 755
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 597 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 638
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 234 aaggtgctctactgcggcatctgccacac 262
>gb|CB674967.1|CB674967 OSJNEe10F17.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10F17 5', mRNA sequence
Length = 779
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 614 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 655
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 251 aaggtgctctactgcggcatctgccacac 279
>gb|CB685456.1|CB685456 OSJNEf15N17.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15N17 5', mRNA sequence
Length = 634
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 585 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 626
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 231 aaggtgctctactgcggcatctgccacac 259
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full
insert sequence
Length = 1916
Score = 75.8 bits (38), Expect = 6e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccg 640
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1084 gcggcgccgctgctgtgcgccggcgtgacggtgtacagcccg 1125
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 1586 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 1645
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 1646 gcttcgtcatcgacgttgccggcagca 1672
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 721 aaggtgctctactgcggcatctgccacac 749
>gb|CB655413.1|CB655413 OSJNEc08N04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08N04 5', mRNA sequence
Length = 703
Score = 73.8 bits (37), Expect = 2e-010
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 617 gcggcgccgctgctgtgcgccggcgtgacggtgtacagccc 657
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
|||||||||||||| || |||||||||||
Sbjct: 263 aaggtgctctactgtggcatctgccacac 291
>gb|CB646345.1|CB646345 OSJNEb08M02.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08M02 3', mRNA sequence
Length = 776
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 378 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 319
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 318 gcttcgtcatcgacgttgccggcagca 292
>gb|CB646878.1|CB646878 OSJNEb09J03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09J03 3', mRNA sequence
Length = 750
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 273 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 214
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 213 gcttcgtcatcgacgttgccggcagca 187
>gb|CB653589.1|CB653589 OSJNEc04M09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04M09 3', mRNA sequence
Length = 773
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 307 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 248
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 247 gcttcgtcatcgacgttgccggcagca 221
>gb|CB654463.1|CB654463 OSJNEc07A05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07A05 5', mRNA sequence
Length = 761
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 463 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 404
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 403 gcttcgtcatcgacgttgccggcagca 377
>gb|CB655788.1|CB655788 OSJNEc09I09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I09 3', mRNA sequence
Length = 787
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 317 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 258
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 257 gcttcgtcatcgacgttgccggcagca 231
>gb|CB657550.1|CB657550 OSJNEc12P22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12P22 3', mRNA sequence
Length = 815
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 469 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 410
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 409 gcttcgtcatcgacgttgccggcagca 383
>gb|CB665927.1|CB665927 OSJNEd12J17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12J17 3', mRNA sequence
Length = 738
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 274 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 215
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 214 gcttcgtcatcgacgttgccggcagca 188
>gb|CB673521.1|CB673521 OSJNEe08B11.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08B11 3', mRNA sequence
Length = 760
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 274 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 215
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 214 gcttcgtcatcgacgttgccggcagca 188
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 615 gcgctggcgtgacggtgtacagcccg 640
|||| |||||||||||||||||||||
Sbjct: 760 gcgccggcgtgacggtgtacagcccg 735
>gb|CB674968.1|CB674968 OSJNEe10F17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10F17 3', mRNA sequence
Length = 776
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 450 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 391
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 390 gcttcgtcatcgacgttgccggcagca 364
>gb|CB681488.1|CB681488 OSJNEf07M17.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07M17 3', mRNA sequence
Length = 743
Score = 69.9 bits (35), Expect = 4e-009
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 467 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 408
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| ||||||| ||||| ||||
Sbjct: 407 gcttcgtcatcgacgttgccggcagca 381
>gb|AU077741.1|AU077741 AU077741 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10143_1A, mRNA sequence
Length = 458
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 129 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 166
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 276 gtgacggtgatcagctcgtcg 296
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full
insert sequence
Length = 1407
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacag 636
|||||||||||||||||||| |||||||||||||||||
Sbjct: 581 gcggcgccgctgctgtgcgccggcgtgacggtgtacag 618
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 1139 taccgcttcgtcatcgacgtcgccgg 1164
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 728 gtgacggtgatcagctcgtcg 748
Score = 42.1 bits (21), Expect = 0.87
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| ||||| |||||
Sbjct: 227 aaggtgctctactgcggcatctgtcacac 255
>gb|D48506.1|D48506 RICS14727A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 317
Score = 65.9 bits (33), Expect = 6e-008
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219
|||||||||||||||||||| | |||| |||||| |||||||| |||||||||||||||
Sbjct: 150 cgggtgggccgccagggacgnctccgg-cacctcaccccctacaactacaccctcaggaa 208
>gb|AU097525.1|AU097525 AU097525 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5617, mRNA sequence
Length = 241
Score = 61.9 bits (31), Expect = 9e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1156 ctaccgcttcgtcgtcgacgtcgccggtagcaacgtcga 1194
||||||||||||||||||||||||||| |||||| ||||
Sbjct: 8 ctaccgcttcgtcgtcgacgtcgccggcagcaacatcga 46
>gb|AU101083.1|AU101083 AU101083 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0754, mRNA sequence
Length = 591
Score = 61.9 bits (31), Expect = 9e-007
Identities = 79/94 (84%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1094 gaggtggtcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtc 1153
|||||| ||||||||| ||||| ||| ||| |||||||||||||| ||||||||
Sbjct: 259 gaggtgatcaagatggactacgtcaacaccgcgatggagcggctggagaagaacgacgtn 318
Query: 1154 cgctaccgcttcgtcgtcgacgtcgccggtagca 1187
| ||||||||||||| ||||||||||||| ||||
Sbjct: 319 c-ctaccgcttcgtcatcgacgtcgccggcagca 351
>gb|CB653588.1|CB653588 OSJNEc04M09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04M09 5', mRNA sequence
Length = 632
Score = 61.9 bits (31), Expect = 9e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1101 tcaagatggggtacgtgaacgaggcgctggagcggctggagcgcaacgacgtccgctacc 1160
||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||||||
Sbjct: 304 tcaagatggactacgtcaacacggcgatggagcggctggagaagaacgatgtccgctacc 245
Query: 1161 gcttcgtcgtcgacgtcgccggtagca 1187
|||||||| | ||||| ||||| ||||
Sbjct: 244 gcttcgtcattgacgttgccggcagca 218
>dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M10, full
insert sequence
Length = 1378
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 574 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 623
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 1125 gcgcaacgacgtccgctaccgcttcgtc 1152
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 229 tactgcgggatgtgccacacggac 252
>dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021L06, full
insert sequence
Length = 1355
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 571 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 620
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 1122 gcgcaacgacgtccgctaccgcttcgtc 1149
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 226 tactgcgggatgtgccacacggac 249
>gb|AACV01008340.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008340, whole
genome shotgun sequence
Length = 8690
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 4858 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 4809
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 3744 gcgcaacgacgtccgctaccgcttcgtc 3717
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 5201 tactgcgggatgtgccacacggac 5178
>ref|XM_474988.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1083
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 475 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 524
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 1026 gcgcaacgacgtccgctaccgcttcgtc 1053
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 130 tactgcgggatgtgccacacggac 153
>ref|NT_107205.1| Oryza sativa (japonica cultivar-group)
Length = 801429
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 210025 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 209976
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 208911 gcgcaacgacgtccgctaccgcttcgtc 208884
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 210370 tactgcgggatgtgccacacggac 210347
>gb|CH401180.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000017
genomic scaffold, whole genome shotgun sequence
Length = 427215
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 199319 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 199270
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 198205 gcgcaacgacgtccgctaccgcttcgtc 198178
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 199662 tactgcgggatgtgccacacggac 199639
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 37535170 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 37535121
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 37534056 gcgcaacgacgtccgctaccgcttcgtc 37534029
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 6652448 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 6652486
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 24861044 ggacgccgcggccatggcggcggc 24861021
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 22701823 gaggcggaggcggcggcggcgga 22701845
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 35190036 gaggcggaggcggcggcggcgg 35190015
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 30140326 gaggcggaggcggcggcggcgg 30140305
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27728842 gaggcggaggcggcggcggcgg 27728863
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 12087676 gaggcggaggcggcggcggcgg 12087655
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 33640557 gaggcggaggcggcggcggcg 33640577
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 834 cggccatggcggcggccgccg 854
|||||||||||||||||||||
Sbjct: 27787745 cggccatggcggcggccgccg 27787725
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 14637823 ggcggaggcggcggcggcgga 14637803
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 37535513 tactgcgggatgtgccacacggac 37535490
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 35380400 ggcggaggcggcggcggcgg 35380419
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 31341309 cgaggcggcggcggcggcggcgga 31341286
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 30931872 gaggcggaggcggcggcggc 30931853
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25908637 ggcggaggcggcggcggcgg 25908618
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 25378931 cgaggcggaggcggcggcgg 25378950
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatg 1217
||||||||||||||||||||
Sbjct: 22536679 ggaggcggcggcggcggatg 22536698
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccgcgcc 114
||||||||||| ||||||||||||
Sbjct: 10698516 cgtcgtcgtcggccccgccgcgcc 10698539
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3434633 ggcggaggcggcggcggcgg 3434652
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15,
complete sequence
Length = 150007
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 57093 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 57044
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 55979 gcgcaacgacgtccgctaccgcttcgtc 55952
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 57438 tactgcgggatgtgccacacggac 57415
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 60.0 bits (30), Expect = 4e-006
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgctggcgtgacggtgtacagcccgctgaagca 648
|||||||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct: 8596650 gcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagca 8596601
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 8595536 gcgcaacgacgtccgctaccgcttcgtc 8595509
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 31106204 gcgccgctgctgtgcgccggggtgacggtgtac 31106236
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27441861 gaggcggaggcggcggcggcgg 27441882
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27418999 gaggcggaggcggcggcggcgg 27418978
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 24364564 aggcggaggcggcggcggcgga 24364543
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 176841 gaggcggaggcggcggcggcgg 176862
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 18397923 ggcggaggcggcggcggcgga 18397943
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 35283444 ggcggaggcggcggcggcgg 35283425
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 31107444 cgacgtcaggtaccgcttcgtcgtcgac 31107471
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 30547012 cgaggcggaggcggcggcgg 30547031
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgc 1218
||||| ||||||||||||||||||
Sbjct: 25163163 ggcggcggcggcggcggcggatgc 25163140
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 21503967 gaggcggaggcggcggcggc 21503948
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21174570 ggcggaggcggcggcggcgg 21174551
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9346280 ggcggaggcggcggcggcgg 9346261
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 254 tactgcgggatctgccacacggac 277
||||||||||| ||||||||||||
Sbjct: 8596995 tactgcgggatgtgccacacggac 8596972
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6871382 ggcggaggcggcggcggcgg 6871363
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 909529 aggcggaggcggcggcggcg 909510
>gb|AQ914526.1|AQ914526 nbeb0049I15f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0049I15f, DNA sequence
Length = 817
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 526 gcgcaacgacgtccgctaccgcttcgtc 553
>gb|AU166356.1|AU166356 AU166356 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C11644, mRNA sequence
Length = 449
Score = 56.0 bits (28), Expect = 6e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
||||||||||||||||||||||||||||
Sbjct: 173 gcgcaacgacgtccgctaccgcttcgtc 200
>gb|AACV01029126.1| Oryza sativa (japonica cultivar-group) Ctg029126, whole genome
shotgun sequence
Length = 4729
Score = 56.0 bits (28), Expect = 6e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 689 ggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggc 732
|||||||||||| | |||||||||||||||||| | ||||||||
Sbjct: 2388 ggcctcggcggcctcggccacatgggcgtgaagttcgccaaggc 2431
>gb|CB684558.1|CB684558 OSJNEf14D06.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14D06 5', mRNA sequence
Length = 454
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1145 aacgacgtccgctaccgcttcgtcgtcgacgtcgccggtagca 1187
||||| |||||||||||||||||| ||||||| ||||| ||||
Sbjct: 22 aacgatgtccgctaccgcttcgtcatcgacgttgccggcagca 64
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
complete sequence
Length = 146568
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 103049 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 103087
>gb|AACV01006124.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006124, whole
genome shotgun sequence
Length = 40555
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 5031 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 4993
>ref|NM_187696.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1176
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 486 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 524
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 1586469 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 1586507
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 6460086 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 6460124
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 11895314 gaggcggaggcggcggcggcgg 11895293
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccgcgcc 114
||||||||||| ||||||||||||
Sbjct: 10506154 cgtcgtcgtcggccccgccgcgcc 10506177
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3242271 ggcggaggcggcggcggcgg 3242290
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 6422136 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 6422174
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 24293542 ggacgccgcggccatggcggcggc 24293519
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 22045518 gaggcggaggcggcggcggcgga 22045540
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 34329060 gaggcggaggcggcggcggcgg 34329039
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 30061790 gaggcggaggcggcggcggcgg 30061769
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 29195649 gaggcggaggcggcggcggcgg 29195628
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 26762711 gaggcggaggcggcggcggcgg 26762732
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 11775257 gaggcggaggcggcggcggcgg 11775236
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 834 cggccatggcggcggccgccg 854
|||||||||||||||||||||
Sbjct: 26821744 cggccatggcggcggccgccg 26821724
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 13979617 ggcggaggcggcggcggcgga 13979597
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 34499497 ggcggaggcggcggcggcgg 34499516
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
||||| ||||||||||||||||||
Sbjct: 31304462 cgaggaggaggcggcggcggcgga 31304439
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 30493837 cgaggcggcggcggcggcggcgga 30493814
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25361232 ggcggaggcggcggcggcgg 25361213
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 24855907 cgaggcggaggcggcggcgg 24855926
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 22628514 cgaggcggaggcggcggcgg 22628495
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatg 1217
||||||||||||||||||||
Sbjct: 21917274 ggaggcggcggcggcggatg 21917293
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgc 1218
||||| ||||||||||||||||||
Sbjct: 12973133 ggcggcggcggcggcggcggatgc 12973110
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccgcgcc 114
||||||||||| ||||||||||||
Sbjct: 10422623 cgtcgtcgtcggccccgccgcgcc 10422646
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3292510 ggcggaggcggcggcggcgg 3292529
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 601 ggcgccgctgctgtgcgctggcgtgacggtgtacagccc 639
|||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 6422923 ggcgccgctgctgtgcgccggcgtcacggtgtactgccc 6422961
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 24376073 ggacgccgcggccatggcggcggc 24376050
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 22052489 gaggcggaggcggcggcggcgga 22052511
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 34238588 gaggcggaggcggcggcggcgg 34238567
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 29970368 gaggcggaggcggcggcggcgg 29970347
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 29104227 gaggcggaggcggcggcggcgg 29104206
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 26671388 gaggcggaggcggcggcggcgg 26671409
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 11778494 gaggcggaggcggcggcggcgg 11778473
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 834 cggccatggcggcggccgccg 854
|||||||||||||||||||||
Sbjct: 26730421 cggccatggcggcggccgccg 26730401
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 13984642 ggcggaggcggcggcggcgga 13984622
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 34409025 ggcggaggcggcggcggcgg 34409044
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
||||| ||||||||||||||||||
Sbjct: 31213946 cgaggaggaggcggcggcggcgga 31213923
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 30402415 cgaggcggcggcggcggcggcgga 30402392
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25269923 ggcggaggcggcggcggcgg 25269904
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 22635485 cgaggcggaggcggcggcgg 22635466
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatg 1217
||||||||||||||||||||
Sbjct: 21924245 ggaggcggcggcggcggatg 21924264
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgc 1218
||||| ||||||||||||||||||
Sbjct: 12976358 ggcggcggcggcggcggcggatgc 12976335
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccgcgcc 114
||||||||||| ||||||||||||
Sbjct: 10424522 cgtcgtcgtcggccccgccgcgcc 10424545
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3292399 ggcggaggcggcggcggcgg 3292418
>gb|CB655414.1|CB655414 OSJNEc08N04.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08N04 3', mRNA sequence
Length = 771
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 262 taccgcttcgtcgtcgacgtcgccgg 237
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 673 gtgacggtgatcagctcgtcg 653
>gb|CB655790.1|CB655790 OSJNEc09I13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I13 3', mRNA sequence
Length = 808
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
||||||||||||||||||||||||||
Sbjct: 494 taccgcttcgtcgtcgacgtcgccgg 469
>gb|AZ133374.1|AZ133374 OSJNBb0108H22r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0108H22r, DNA
sequence
Length = 706
Score = 50.1 bits (25), Expect = 0.004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1141 gcgcaacgacgtccgctaccgcttcgtc 1168
|||||||||||| |||||||||||||||
Sbjct: 565 gcgcaacgacgtncgctaccgcttcgtc 592
>gb|C71996.1|C71996 C71996 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0754_1A, mRNA sequence
Length = 369
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 245 aaggtgctctactgcgggatctgccacac 273
||||||||||||||||| |||||||||||
Sbjct: 245 aaggtgctctactgcggcatctgccacac 273
>gb|CB668738.1|CB668738 OSJNEd16L18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16L18 5', mRNA sequence
Length = 840
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 60 gaggcggaggcggcggcgggggatgcggc 32
>gb|CF280516.1|CF280516 14ETL--07-D15.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-D15, mRNA sequence
Length = 400
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 67 gaggcggaggcggcggcgggggatgcggc 39
>dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P08, full
insert sequence
Length = 1329
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 587 gcgccgctgctgtgcgccggggtgacggtgtac 619
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 1132 cgacgtcaggtaccgcttcgtcgtcgac 1159
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07,
complete sequence
Length = 122120
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 33737 gaggcggaggcggcggcgggggatgcggc 33709
>gb|AACV01010470.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010470, whole
genome shotgun sequence
Length = 19274
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 17064 gcgccgctgctgtgcgccggggtgacggtgtac 17032
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 15824 cgacgtcaggtaccgcttcgtcgtcgac 15797
>gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012646, whole
genome shotgun sequence
Length = 33120
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 1086 gaggcggaggcggcggcgggggatgcggc 1058
>ref|XM_473865.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1233
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 541 gcgccgctgctgtgcgccggggtgacggtgtac 573
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 1179 cgacgtcaggtaccgcttcgtcgtcgac 1206
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 1002816 gcgccgctgctgtgcgccggggtgacggtgtac 1002848
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 1004056 cgacgtcaggtaccgcttcgtcgtcgac 1004083
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 443522 cgaggcggaggcggcggcgg 443541
>ref|NT_107219.1| Oryza sativa (japonica cultivar-group)
Length = 612170
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 396491 gaggcggaggcggcggcgggggatgcggc 396463
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 272045 ggcggaggcggcggcggcgga 272065
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 9172548 gaggcggaggcggcggcgggggatgcggc 9172520
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 6179267 cgaggcggaggcggcggcggcgg 6179245
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 10306618 gaggcggaggcggcggcggcgg 10306639
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggcc 1222
||||||||||||||||||||||
Sbjct: 3786794 ggcggcggcggcggatgcggcc 3786773
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 9047025 ggcggaggcggcggcggcgga 9047045
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 90 ccgtcgtcgtcgtccccgccgcgc 113
|||||||||||||| |||||||||
Sbjct: 11013245 ccgtcgtcgtcgtcgccgccgcgc 11013222
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 7734997 ggcggaggcggcggcggcgg 7734978
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3230705 ggcggaggcggcggcggcgg 3230686
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 8801287 gcgccgctgctgtgcgccggggtgacggtgtac 8801319
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 5257422 gaggcggaggcggcggcggcgg 5257443
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 5233898 gaggcggaggcggcggcggcgg 5233877
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 2250670 aggcggaggcggcggcggcgga 2250649
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 12842790 ggcggaggcggcggcggcgg 12842809
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1199 gaggcggcggcggcggatgcggcc 1222
|||||||||| |||||||||||||
Sbjct: 11405193 gaggcggcggaggcggatgcggcc 11405216
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 8802527 cgacgtcaggtaccgcttcgtcgtcgac 8802554
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 8262912 cgaggcggaggcggcggcgg 8262931
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3552595 ggcggaggcggcggcggcgg 3552576
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgc 1218
||||| ||||||||||||||||||
Sbjct: 3041584 ggcggcggcggcggcggcggatgc 3041561
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 26472861 gaggcggaggcggcggcgggggatgcggc 26472833
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 23479580 cgaggcggaggcggcggcggcgg 23479558
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 16981506 cgaggcggaggcggcggcggcgg 16981484
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27606931 gaggcggaggcggcggcggcgg 27606952
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggcc 1222
||||||||||||||||||||||
Sbjct: 21087107 ggcggcggcggcggatgcggcc 21087086
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2665465 gaggcggaggcggcggcggcgg 2665444
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 26347338 ggcggaggcggcggcggcgga 26347358
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1197 cggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||
Sbjct: 553758 cggaggcggcggcggcggaggcggc 553782
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 90 ccgtcgtcgtcgtccccgccgcgc 113
|||||||||||||| |||||||||
Sbjct: 28313558 ccgtcgtcgtcgtcgccgccgcgc 28313535
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25035310 ggcggaggcggcggcggcgg 25035291
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 20531018 ggcggaggcggcggcggcgg 20530999
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 8097665 cgaggcggaggcggcggcgg 8097684
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 8072386 cgaggcggaggcggcggcgg 8072405
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
|||||| |||||||||||||||||
Sbjct: 6777469 ggacgcggcggccatggcggcggc 6777492
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6496869 ggcggaggcggcggcggcgg 6496850
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3456804 ggcggaggcggcggcggcgg 3456785
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 27945386 gcgccgctgctgtgcgccggggtgacggtgtac 27945418
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 24401521 gaggcggaggcggcggcggcgg 24401542
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 24377997 gaggcggaggcggcggcggcgg 24377976
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 21394769 aggcggaggcggcggcggcgga 21394748
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 120913 gaggcggaggcggcggcggcgg 120934
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 31986889 ggcggaggcggcggcggcgg 31986908
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1199 gaggcggcggcggcggatgcggcc 1222
|||||||||| |||||||||||||
Sbjct: 30549292 gaggcggcggaggcggatgcggcc 30549315
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 27946626 cgacgtcaggtaccgcttcgtcgtcgac 27946653
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 27407011 cgaggcggaggcggcggcgg 27407030
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 22696694 ggcggaggcggcggcggcgg 22696675
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgc 1218
||||| ||||||||||||||||||
Sbjct: 22185683 ggcggcggcggcggcggcggatgc 22185660
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 18616550 gaggcggaggcggcggcggc 18616531
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 18267346 ggcggaggcggcggcggcgg 18267327
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
complete sequence
Length = 160484
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 602 gcgccgctgctgtgcgctggcgtgacggtgtac 634
||||||||||||||||| || ||||||||||||
Sbjct: 88285 gcgccgctgctgtgcgccggggtgacggtgtac 88317
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1147 cgacgtccgctaccgcttcgtcgtcgac 1174
||||||| | ||||||||||||||||||
Sbjct: 89525 cgacgtcaggtaccgcttcgtcgtcgac 89552
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||||||
Sbjct: 26751798 gaggcggaggcggcggcgggggatgcggc 26751770
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcggatgcgg 1220
|||||||||||||||||||||| |||||
Sbjct: 16524246 gaggcggaggcggcggcggcggctgcgg 16524273
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 23791636 cgaggcggaggcggcggcggcgg 23791614
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 17301937 cgaggcggaggcggcggcggcgg 17301915
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27856023 gaggcggaggcggcggcggcgg 27856044
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 16524068 gaggcggaggcggcggcggcgg 16524089
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2618271 gaggcggaggcggcggcggcgg 2618250
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 26627353 ggcggaggcggcggcggcgga 26627373
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||||||||| ||||||||||||||
Sbjct: 2997474 gtcgaggcggcggcggcggcggcgg 2997498
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1197 cggaggcggcggcggcggatgcggc 1221
||||||||||||||||||| |||||
Sbjct: 562084 cggaggcggcggcggcggaggcggc 562108
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 90 ccgtcgtcgtcgtccccgccgcgc 113
|||||||||||||| |||||||||
Sbjct: 28598035 ccgtcgtcgtcgtcgccgccgcgc 28598012
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 25303451 ggcggaggcggcggcggcgg 25303432
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 20865161 ggcggaggcggcggcggcgg 20865142
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
|||||| |||||||||||||||||
Sbjct: 6858862 ggacgcggcggccatggcggcggc 6858885
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6611633 ggcggaggcggcggcggcgg 6611614
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3446985 ggcggaggcggcggcggcgg 3446966
>dbj|AK108094.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A06, full
insert sequence
Length = 1431
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 677 ggacgccgcggccatggcggcggc 700
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence,
complete sequence
Length = 171664
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 4551 ggacgccgcggccatggcggcggc 4574
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0579G08
Length = 164452
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 78814 ggcggaggcggcggcggcggacgcggcc 78841
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
sequence
Length = 120254
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 97884 ggacgccgcggccatggcggcggc 97907
>gb|AACV01004360.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004360, whole
genome shotgun sequence
Length = 22456
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 11454 ggcggaggcggcggcggcggacgcggcc 11481
>gb|AACV01007432.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007432, whole
genome shotgun sequence
Length = 26237
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 13858 ggacgccgcggccatggcggcggc 13881
>gb|AACV01025969.1| Oryza sativa (japonica cultivar-group) Ctg025969, whole genome
shotgun sequence
Length = 12703
Score = 48.1 bits (24), Expect = 0.014
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 689 ggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggc 732
|||||||| ||| | |||||||||||||||||| | ||||||||
Sbjct: 8895 ggcctcggtggcctcggccacatgggcgtgaagttcgccaaggc 8938
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
complete sequence
Length = 134183
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcggatgcgg 1220
|||||||||||||||||||||| |||||
Sbjct: 22985 gaggcggaggcggcggcggcggctgcgg 23012
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 22807 gaggcggaggcggcggcggcgg 22828
>ref|XM_469009.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 885
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 579 ggacgccgcggccatggcggcggc 602
>ref|NT_079918.2| Oryza sativa (japonica cultivar-group)
Length = 553008
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 293222 ggacgccgcggccatggcggcggc 293199
>ref|NT_107179.1| Oryza sativa (japonica cultivar-group)
Length = 4877845
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 3368318 ggcggaggcggcggcggcggacgcggcc 3368345
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 248246 gcggaggcggcggcggcgga 248265
>ref|NT_107209.1| Oryza sativa (japonica cultivar-group)
Length = 505262
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcggatgcgg 1220
|||||||||||||||||||||| |||||
Sbjct: 22985 gaggcggaggcggcggcggcggctgcgg 23012
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 22807 gaggcggaggcggcggcggcgg 22828
>gb|CH401376.1| Oryza sativa (japonica cultivar-group) scaffold000254 genomic
scaffold, whole genome shotgun sequence
Length = 20954
Score = 48.1 bits (24), Expect = 0.014
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 689 ggcctcggcggcgtgggccacatgggcgtgaaggtagccaaggc 732
|||||||| ||| | |||||||||||||||||| | ||||||||
Sbjct: 8895 ggcctcggtggcctcggccacatgggcgtgaagttcgccaaggc 8938
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 48.1 bits (24), Expect = 0.014
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcggc 849
||||||||||||||||||||||||
Sbjct: 10810337 ggacgccgcggccatggcggcggc 10810314
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 8651116 gaggcggaggcggcggcggcgga 8651138
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 587116 ggcggaggcggcggcggcgga 587096
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 11857930 ggcggaggcggcggcggcgg 11857911
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 11328224 cgaggcggaggcggcggcgg 11328243
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatg 1217
||||||||||||||||||||
Sbjct: 8485972 ggaggcggcggcggcggatg 8485991
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 48.1 bits (24), Expect = 0.014
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||||||||||||||||||| ||||||
Sbjct: 3537810 ggcggaggcggcggcggcggacgcggcc 3537837
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 12050357 gaggcggaggcggcggcggcgg 12050336
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcg 1213
|||||||||||||||||| ||||||
Sbjct: 22390823 cgtcgaggcggaggcggccgcggcg 22390847
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1162 cttcgtcgtcgacgtcgccgg 1182
|||||||||||||||||||||
Sbjct: 21972376 cttcgtcgtcgacgtcgccgg 21972396
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1197 cggaggcggcggcggcggatgcggc 1221
||||||||||||||||| |||||||
Sbjct: 21227270 cggaggcggcggcggcgcatgcggc 21227246
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 20425796 aggcggaggcggcggcggcgg 20425816
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 16241128 ggcggaggcggcggcggcgga 16241148
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 11949787 ggcggaggcggcggcggcgga 11949767
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 80 gccacccgctccgtcgtcgtcgtc 103
||||||||| ||||||||||||||
Sbjct: 18161972 gccacccgcaccgtcgtcgtcgtc 18161949
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||| || |||||||||
Sbjct: 14454552 ggaggcggcggcggcagaggcggccagc 14454579
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 12978285 ggcggaggcggcggcggcgg 12978266
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 12791036 ggcggaggcggcggcggcgg 12791055
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 cgtcgtcgtcgtccccgccg 110
||||||||||||||||||||
Sbjct: 11555634 cgtcgtcgtcgtccccgccg 11555653
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 10811470 ggcggaggcggcggcggcgg 10811489
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 830 gccgcggccatggcggcggc 849
||||||||||||||||||||
Sbjct: 10132830 gccgcggccatggcggcggc 10132849
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 7754234 ggcggaggcggcggcggcgg 7754215
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 315661 gcggaggcggcggcggcgga 315680
>gb|AZ125939.1|AZ125939 OSJNBb0072E09f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0072E09f, DNA
sequence
Length = 492
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 289 cgaggcggaggcggcggcggcgg 311
>gb|D47252.1|D47252 RICS12515A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 342
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 20 gaggcggaggcggcggcggcgga 42
>gb|D47666.1|D47666 RICS13294A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 481
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 14 gaggcggaggcggcggcggcgga 36
>gb|D47797.1|D47797 RICS13489A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 438
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 20 gaggcggaggcggcggcggcgga 42
>gb|D47861.1|D47861 RICS13592A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 461
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 21 gaggcggaggcggcggcggcgga 43
>gb|AU067937.1|AU067937 AU067937 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11094_5A, mRNA sequence
Length = 271
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 6 gaggcggaggcggcggcggcgga 28
>gb|AU068706.1|AU068706 AU068706 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50156_1A, mRNA sequence
Length = 402
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 36 gaggcggaggcggcggcggcgga 58
>gb|AU082563.1|AU082563 AU082563 Rice mature leaf Oryza sativa (japonica cultivar-group) cDNA
clone S20379, mRNA sequence
Length = 712
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 33 gaggcggaggcggcggcggcgga 55
>gb|AU182365.1|AU182365 AU182365 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2539, mRNA sequence
Length = 431
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 46 gaggcggaggcggcggcggcgga 68
>gb|CB639963.1|CB639963 OSJNEa12K23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12K23 5', mRNA sequence
Length = 575
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 18 gaggcggaggcggcggcggcgga 40
>gb|CB641242.1|CB641242 OSJNEa18G15.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18G15 5', mRNA sequence
Length = 622
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 40 gaggcggaggcggcggcggcgga 62
>gb|CB647284.1|CB647284 OSJNEb10C10.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10C10 5', mRNA sequence
Length = 670
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 49 cgaggcggaggcggcggcggcgg 27
>gb|CB647308.1|CB647308 OSJNEb10C24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10C24 5', mRNA sequence
Length = 733
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 49 cgaggcggaggcggcggcggcgg 27
>gb|CB651646.1|CB651646 OSJNEb16L01.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16L01 5', mRNA sequence
Length = 796
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 3 gaggcggaggcggcggcggcgga 25
>gb|CB656228.1|CB656228 OSJNEc10F06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10F06 5', mRNA sequence
Length = 787
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 18 gaggcggaggcggcggcggcgga 40
>dbj|AK071503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N08, full
insert sequence
Length = 1293
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 52 cgaggcggaggcggcggcggcgg 30
>dbj|AK101899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B09, full
insert sequence
Length = 2454
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 218 cgaggcggaggcggcggcggcgg 196
>dbj|AK102594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098G23, full
insert sequence
Length = 1493
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 55 cgaggcggaggcggcggcggcgg 77
>dbj|AK120360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M02, full
insert sequence
Length = 2047
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 43 gaggcggaggcggcggcggcgga 65
>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 108805
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 50616 gcggaggcggcggcggcggatgtggcc 50642
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
sequence
Length = 117157
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 57050 cgaggcggaggcggcggcggcgg 57028
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
sequence
Length = 167397
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 95793 gaggcggaggcggcggcggcgga 95771
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0680F05
Length = 185495
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 137382 cgaggcggaggcggcggcggcgg 137404
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
complete sequence
Length = 127642
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 72457 cgaggcggaggcggcggcggcgg 72435
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1613_G04
Length = 135357
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 5714 cgaggcggaggcggcggcggcgg 5736
>ref|NT_079833.2| Oryza sativa (japonica cultivar-group)
Length = 3813697
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 3358912 gcggaggcggcggcggcggatgtggcc 3358886
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2667598 gaggcggaggcggcggcggcgg 2667619
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 2364154 ggcggaggcggcggcggcgga 2364134
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 1463321 cgaggcggaggcggcggcgg 1463340
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10,
complete sequence
Length = 159672
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 99249 cgaggcggaggcggcggcggcgg 99227
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02,
complete sequence
Length = 146435
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 47990 cgaggcggaggcggcggcggcgg 47968
>gb|AACV01000620.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000620, whole
genome shotgun sequence
Length = 10168
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8786 cgaggcggaggcggcggcggcgg 8808
>gb|AACV01002982.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002982, whole
genome shotgun sequence
Length = 32719
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 32491 cgaggcggaggcggcggcggcgg 32513
>gb|AACV01007246.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007246, whole
genome shotgun sequence
Length = 34486
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 25537 gaggcggaggcggcggcggcgga 25559
>gb|AACV01011965.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011965, whole
genome shotgun sequence
Length = 56035
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 38306 cgaggcggaggcggcggcggcgg 38284
>gb|AACV01012446.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012446, whole
genome shotgun sequence
Length = 31062
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 23982 cgaggcggaggcggcggcggcgg 24004
>gb|AACV01013110.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013110, whole
genome shotgun sequence
Length = 22260
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 3951 gaggcggaggcggcggcggcgga 3973
>gb|AACV01021723.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021723, whole
genome shotgun sequence
Length = 68776
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 41493 cgaggcggaggcggcggcggcgg 41471
>gb|AACV01024457.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024457, whole
genome shotgun sequence
Length = 23027
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 16850 gcggaggcggcggcggcggatgtggcc 16876
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 40790125 cgaggcggaggcggcggcggcgg 40790103
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8806388 cgaggcggaggcggcggcggcgg 8806366
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 43216800 gaggcggaggcggcggcggcgg 43216779
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 42897899 gaggcggaggcggcggcggcgg 42897920
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcg 1213
||||||||||||||||||||||
Sbjct: 39023648 cgaggcggaggcggcggcggcg 39023669
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 31763758 gaggcggaggcggcggcggcgg 31763779
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 28031239 gaggcggaggcggcggcggcgg 28031218
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27750886 gaggcggaggcggcggcggcgg 27750865
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 23962948 gaggcggaggcggcggcggcgg 23962969
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggcca 1223
||||||||||||||||| ||||||||
Sbjct: 8666375 ggaggcggcggcggcggctgcggcca 8666400
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 43235720 aggcggaggcggcggcggcgg 43235740
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 36012150 gaggcggaggcggcggcggcg 36012130
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 35555342 gaggcggaggcggcggcggcg 35555322
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 79 cgccacccgctccgtcgtcgtcgtc 103
|||||||||| ||||||||||||||
Sbjct: 26026670 cgccacccgcaccgtcgtcgtcgtc 26026646
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 401 ggcgtcggggtgatcgttggg 421
|||||||||||||||||||||
Sbjct: 24785136 ggcgtcggggtgatcgttggg 24785156
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 10868011 ggcggcggcggcggatgcggc 10867991
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 145007 gaggcggaggcggcggcggcg 144987
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 41953513 ggcggaggcggcggcggcgg 41953532
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 39090430 ggcggaggcggcggcggcgg 39090449
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 30371528 aggcggaggcggcggcggcg 30371509
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24461390 ggcggaggcggcggcggcgg 24461371
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 24024578 cgaggcggaggcggcggcgg 24024597
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 23733187 gaggcggaggcggcggcggc 23733206
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23023055 ggcggaggcggcggcggcgg 23023036
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||||| ||||||
Sbjct: 21233245 ggcggcggcggcggcggcggaggcggcc 21233218
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 19989046 aggcggaggcggcggcggcg 19989065
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1200 aggcggcggcggcggatgcg 1219
||||||||||||||||||||
Sbjct: 10506161 aggcggcggcggcggatgcg 10506180
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9807302 ggcggaggcggcggcggcgg 9807321
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6220269 ggcggaggcggcggcggcgg 6220250
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5838572 ggcggaggcggcggcggcgg 5838553
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3081317 ggcggaggcggcggcggcgg 3081336
>ref|NM_184802.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1404
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 32 gaggcggaggcggcggcggcgga 10
>ref|NM_189996.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1239
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 99 cgaggcggaggcggcggcggcgg 121
>ref|NM_196836.1| Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNBb0011A08.21), mRNA
Length = 435
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 171 cgaggcggaggcggcggcggcgg 193
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 3032664 cgaggcggaggcggcggcggcgg 3032686
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 1522171 gtgacggtgatcagctcgtcg 1522151
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2783121 ggcggaggcggcggcggcgg 2783140
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2718954 ggcggaggcggcggcggcgg 2718935
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2323837 ggcggaggcggcggcggcgg 2323818
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 2046032 gcggaggcggcggcggcgga 2046013
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 1524550 cgaggcggcggcggcggcggcgga 1524527
>ref|XM_479972.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 513
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 294 cgaggcggaggcggcggcggcgg 316
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 418419 cgaggcggaggcggcggcggcgg 418397
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2845094 gaggcggaggcggcggcggcgg 2845073
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2526193 gaggcggaggcggcggcggcgg 2526214
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 2864014 aggcggaggcggcggcggcgg 2864034
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 1581807 ggcggaggcggcggcggcgg 1581826
>ref|NT_107174.1| Oryza sativa (japonica cultivar-group)
Length = 4376475
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 2640593 gaggcggaggcggcggcggcgga 2640615
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 3223589 cgaggcggaggcggcggcgg 3223570
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatg 1217
||||||||||||||||||||
Sbjct: 2512349 ggaggcggcggcggcggatg 2512368
>ref|NT_107210.1| Oryza sativa (japonica cultivar-group)
Length = 1353368
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 295304 cgaggcggaggcggcggcggcgg 295282
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 181589 cgaggcggaggcggcggcggcgg 181567
>ref|NM_187958.1| Oryza sativa (japonica cultivar-group), Ozsa8378 predicted mRNA
Length = 258
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 63 cgaggcggaggcggcggcggcgg 41
>ref|NT_079872.2| Oryza sativa (japonica cultivar-group)
Length = 1124013
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 627201 gaggcggaggcggcggcggcgga 627179
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0675A05
Length = 131972
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 31007 gaggcggaggcggcggcggcgga 30985
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8806228 cgaggcggaggcggcggcggcgg 8806206
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggcca 1223
||||||||||||||||| ||||||||
Sbjct: 8666215 ggaggcggcggcggcggctgcggcca 8666240
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 145007 gaggcggaggcggcggcggcg 144987
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9807142 ggcggaggcggcggcggcgg 9807161
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6220109 ggcggaggcggcggcggcgg 6220090
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5838412 ggcggaggcggcggcggcgg 5838393
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3081317 ggcggaggcggcggcggcgg 3081336
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 1779710 cgaggcggaggcggcggcggcgg 1779732
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 28029075 gaggcggaggcggcggcggcgg 28029096
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 22799937 gaggcggaggcggcggcggcgg 22799916
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 20338089 gaggcggaggcggcggcggcgg 20338110
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1190 gtcgaggcggaggcggcggcgg 1211
||||||||||||||||||||||
Sbjct: 2067360 gtcgaggcggaggcggcggcgg 2067339
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 26327877 gaggcggaggcggcggcggcg 26327897
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 10117151 gtgacggtgatcagctcgtcg 10117131
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 850186 ggcggaggcggcggcggcgga 850166
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggcc 1222
||||||||| |||||||||||||||
Sbjct: 834882 ggaggcggccgcggcggatgcggcc 834858
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 556831 ggcggaggcggcggcggcgga 556851
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24272515 ggcggaggcggcggcggcgg 24272496
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21110156 ggcggaggcggcggcggcgg 21110175
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 20960190 ggcggaggcggcggcggcgg 20960209
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 19111955 cgaggcggcggcggcggcggcgga 19111978
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 84 cccgctccgtcgtcgtcgtccccgccgc 111
||||| |||||||||||||| |||||||
Sbjct: 10541022 cccgcgccgtcgtcgtcgtcgccgccgc 10540995
>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0469E09
Length = 146081
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 44634 cgaggcggaggcggcggcggcgg 44612
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0699D11
Length = 140825
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 126063 cgaggcggaggcggcggcggcgg 126041
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0052O12
Length = 167881
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 12101 cgaggcggaggcggcggcggcgg 12079
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBa0093F16
Length = 160925
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 151433 cgaggcggaggcggcggcggcgg 151411
>gb|CH401274.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000111
genomic scaffold, whole genome shotgun sequence
Length = 3984395
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 865205 gcggaggcggcggcggcggatgtggcc 865179
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 205032 gaggcggaggcggcggcggcgg 205053
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 4243740 cgaggcggaggcggcggcggcgg 4243762
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 9553015 gaggcggaggcggcggcggcgg 9552994
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 6812863 ggcggcggcggcggcggcggatgcg 6812887
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 2763577 gtgacggtgatcagctcgtcg 2763557
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 7087668 ggaggcggcggcggcggaggcggc 7087645
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 7073395 ggaggcggcggcggcggaggcggc 7073372
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6124954 ggcggaggcggcggcggcgg 6124935
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1188 acgtcgaggcggaggcggcg 1207
||||||||||||||||||||
Sbjct: 6124904 acgtcgaggcggaggcggcg 6124885
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3987243 ggcggaggcggcggcggcgg 3987262
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3929510 ggcggaggcggcggcggcgg 3929491
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3928624 ggcggaggcggcggcggcgg 3928605
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3492926 ggcggaggcggcggcggcgg 3492907
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 3257911 gcggaggcggcggcggcgga 3257892
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 3420920 gaggcggaggcggcggcggcgga 3420898
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||||
Sbjct: 7168059 gtcgaggccgaggcggcggcggcgg 7168083
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 5268195 ggcggcggcggcggcggcggatgcg 5268171
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 7168067 cgaggcggcggcggcggcggcgga 7168090
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 5248082 ggaggcggcggcggcggcggcggccagc 5248109
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 5233178 ggaggcggcggcggcggcggcggccagc 5233205
>gb|CH401205.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000042 genomic
scaffold, whole genome shotgun sequence
Length = 2493951
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 2175244 cgaggcggaggcggcggcggcgg 2175222
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 14987074 cgaggcggaggcggcggcggcgg 14987052
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcg 1213
||||||||||||||||||||||
Sbjct: 13189629 cgaggcggaggcggcggcggcg 13189650
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 6099586 gaggcggaggcggcggcggcgg 6099607
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 2423163 gaggcggaggcggcggcggcgg 2423142
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 17298163 aggcggaggcggcggcggcgg 17298183
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 9735098 gaggcggaggcggcggcggcg 9735078
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 79 cgccacccgctccgtcgtcgtcgtc 103
|||||||||| ||||||||||||||
Sbjct: 489277 cgccacccgcaccgtcgtcgtcgtc 489253
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16066741 ggcggaggcggcggcggcgg 16066760
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgc 618
||||||||||||||||||||
Sbjct: 15402608 gcggcgccgctgctgtgcgc 15402589
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 13256330 ggcggaggcggcggcggcgg 13256349
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 4760108 aggcggaggcggcggcggcg 4760089
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8857499 cgaggcggaggcggcggcggcgg 8857477
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggcca 1223
||||||||||||||||| ||||||||
Sbjct: 8706455 ggaggcggcggcggcggctgcggcca 8706480
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 11058920 ggcggcggcggcggatgcggc 11058900
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 121380 gaggcggaggcggcggcggcg 121360
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1200 aggcggcggcggcggatgcg 1219
||||||||||||||||||||
Sbjct: 10762531 aggcggcggcggcggatgcg 10762550
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9846751 ggcggaggcggcggcggcgg 9846770
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6286544 ggcggaggcggcggcggcgg 6286525
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5873986 ggcggaggcggcggcggcgg 5873967
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3155931 ggcggaggcggcggcggcgg 3155950
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 8913769 gcggaggcggcggcggcggatgtggcc 8913743
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcg 847
||||||||||||||||||||||
Sbjct: 22007837 ggacgccgcggccatggcggcg 22007816
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 8253596 gaggcggaggcggcggcggcgg 8253617
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 15788935 ggcggcggcggcggatgcggc 15788915
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 2438754 ggcggcggcggcggatgcggc 2438774
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 22603882 cgaggcggcggcggcggcggcgga 22603905
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 20194498 ggcggaggcggcggcggcgg 20194479
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 18848632 cgaggcggaggcggcggcgg 18848613
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1202 gcggcggcggcggatgcggc 1221
||||||||||||||||||||
Sbjct: 4670715 gcggcggcggcggatgcggc 4670734
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2506616 ggcggaggcggcggcggcgg 2506635
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 15109534 cgaggcggaggcggcggcggcgg 15109556
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 20418809 gaggcggaggcggcggcggcgg 20418788
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 17678657 ggcggcggcggcggcggcggatgcg 17678681
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 13629371 gtgacggtgatcagctcgtcg 13629351
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 2914219 ggcggaggcggcggcggcgga 2914199
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 17953462 ggaggcggcggcggcggaggcggc 17953439
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 17939189 ggaggcggcggcggcggaggcggc 17939166
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16990748 ggcggaggcggcggcggcgg 16990729
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1188 acgtcgaggcggaggcggcg 1207
||||||||||||||||||||
Sbjct: 16990698 acgtcgaggcggaggcggcg 16990679
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 14853037 ggcggaggcggcggcggcgg 14853056
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 14795304 ggcggaggcggcggcggcgg 14795285
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 14794418 ggcggaggcggcggcggcgg 14794399
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 14358720 ggcggaggcggcggcggcgg 14358701
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 14123705 gcggaggcggcggcggcgga 14123686
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 5306034 gaggcggaggcggcggcggc 5306053
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 3420920 gaggcggaggcggcggcggcgga 3420898
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 11238462 gaggcggaggcggcggcggcgg 11238441
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 9439751 gaggcggaggcggcggcggcgg 9439730
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||||
Sbjct: 7168059 gtcgaggccgaggcggcggcggcgg 7168083
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 5268195 ggcggcggcggcggcggcggatgcg 5268171
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 29567730 ggcggaggcggcggcggcgg 29567749
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23084984 ggcggaggcggcggcggcgg 23084965
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23010012 ggcggaggcggcggcggcgg 23009993
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16434928 ggcggaggcggcggcggcgg 16434947
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9278838 ggcggaggcggcggcggcgg 9278857
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9262043 ggcggaggcggcggcggcgg 9262062
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 7168067 cgaggcggcggcggcggcggcgga 7168090
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 5248082 ggaggcggcggcggcggcggcggccagc 5248109
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 5233178 ggaggcggcggcggcggcggcggccagc 5233205
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 40188795 cgaggcggaggcggcggcggcgg 40188773
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8857499 cgaggcggaggcggcggcggcgg 8857477
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcg 1213
||||||||||||||||||||||
Sbjct: 38391350 cgaggcggaggcggcggcggcg 38391371
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 31301307 gaggcggaggcggcggcggcgg 31301328
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27624884 gaggcggaggcggcggcggcgg 27624863
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 23447718 gaggcggaggcggcggcggcgg 23447739
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggcca 1223
||||||||||||||||| ||||||||
Sbjct: 8706455 ggaggcggcggcggcggctgcggcca 8706480
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 42499884 aggcggaggcggcggcggcgg 42499904
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 34936819 gaggcggaggcggcggcggcg 34936799
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 79 cgccacccgctccgtcgtcgtcgtc 103
|||||||||| ||||||||||||||
Sbjct: 25690998 cgccacccgcaccgtcgtcgtcgtc 25690974
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 401 ggcgtcggggtgatcgttggg 421
|||||||||||||||||||||
Sbjct: 24318077 ggcgtcggggtgatcgttggg 24318097
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1200 aggcggcggcggcggatgcgg 1220
|||||||||||||||||||||
Sbjct: 13403084 aggcggcggcggcggatgcgg 13403064
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 11058920 ggcggcggcggcggatgcggc 11058900
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 121380 gaggcggaggcggcggcggcg 121360
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 41268462 ggcggaggcggcggcggcgg 41268481
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 599 gcggcgccgctgctgtgcgc 618
||||||||||||||||||||
Sbjct: 40604329 gcggcgccgctgctgtgcgc 40604310
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 38458051 ggcggaggcggcggcggcgg 38458070
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 29961829 aggcggaggcggcggcggcg 29961810
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 23508243 cgaggcggaggcggcggcgg 23508262
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 23201711 gaggcggaggcggcggcggc 23201730
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 22509715 ggcggaggcggcggcggcgg 22509696
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||||| ||||||
Sbjct: 20725200 ggcggcggcggcggcggcggaggcggcc 20725173
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 19565615 aggcggaggcggcggcggcg 19565634
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1200 aggcggcggcggcggatgcg 1219
||||||||||||||||||||
Sbjct: 10762531 aggcggcggcggcggatgcg 10762550
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9846751 ggcggaggcggcggcggcgg 9846770
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6286544 ggcggaggcggcggcggcgg 6286525
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5873986 ggcggaggcggcggcggcgg 5873967
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3155931 ggcggaggcggcggcggcgg 3155950
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 40709455 cgaggcggaggcggcggcggcgg 40709433
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 8808606 cgaggcggaggcggcggcggcgg 8808584
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 43136130 gaggcggaggcggcggcggcgg 43136109
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 42817229 gaggcggaggcggcggcggcgg 42817250
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcg 1213
||||||||||||||||||||||
Sbjct: 38942978 cgaggcggaggcggcggcggcg 38942999
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 31683088 gaggcggaggcggcggcggcgg 31683109
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27950569 gaggcggaggcggcggcggcgg 27950548
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 27670216 gaggcggaggcggcggcggcgg 27670195
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 23884231 gaggcggaggcggcggcggcgg 23884252
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggcca 1223
||||||||||||||||| ||||||||
Sbjct: 8668593 ggaggcggcggcggcggctgcggcca 8668618
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgg 1214
|||||||||||||||||||||
Sbjct: 43155050 aggcggaggcggcggcggcgg 43155070
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 35931480 gaggcggaggcggcggcggcg 35931460
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 35474672 gaggcggaggcggcggcggcg 35474652
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 79 cgccacccgctccgtcgtcgtcgtc 103
|||||||||| ||||||||||||||
Sbjct: 25946450 cgccacccgcaccgtcgtcgtcgtc 25946426
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 401 ggcgtcggggtgatcgttggg 421
|||||||||||||||||||||
Sbjct: 24706419 ggcgtcggggtgatcgttggg 24706439
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 10870229 ggcggcggcggcggatgcggc 10870209
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 147205 gaggcggaggcggcggcggcg 147185
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 41872843 ggcggaggcggcggcggcgg 41872862
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 39009760 ggcggaggcggcggcggcgg 39009779
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 30290858 aggcggaggcggcggcggcg 30290839
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24382673 ggcggaggcggcggcggcgg 24382654
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 23945861 cgaggcggaggcggcggcgg 23945880
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 23654470 gaggcggaggcggcggcggc 23654489
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 22944338 ggcggaggcggcggcggcgg 22944319
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcggcc 1222
||||| ||||||||||||||| ||||||
Sbjct: 21154528 ggcggcggcggcggcggcggaggcggcc 21154501
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcg 1213
||||||||||||||||||||
Sbjct: 19910329 aggcggaggcggcggcggcg 19910348
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1200 aggcggcggcggcggatgcg 1219
||||||||||||||||||||
Sbjct: 10508379 aggcggcggcggcggatgcg 10508398
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9809520 ggcggaggcggcggcggcgg 9809539
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 6222487 ggcggaggcggcggcggcgg 6222468
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 5840790 ggcggaggcggcggcggcgg 5840771
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 3083515 ggcggaggcggcggcggcgg 3083534
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgga 1215
|||||||||||||||||||||||
Sbjct: 3539170 gaggcggaggcggcggcggcgga 3539148
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 11358240 gaggcggaggcggcggcggcgg 11358219
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 9420524 gaggcggaggcggcggcggcgg 9420503
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1190 gtcgaggcggaggcggcggcggcgg 1214
|||||||| ||||||||||||||||
Sbjct: 7183096 gtcgaggccgaggcggcggcggcgg 7183120
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 5380495 ggcggcggcggcggcggcggatgcg 5380471
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24069852 ggcggaggcggcggcggcgg 24069833
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23989977 ggcggaggcggcggcggcgg 23989958
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16912688 ggcggaggcggcggcggcgg 16912707
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9258750 ggcggaggcggcggcggcgg 9258769
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 9233931 ggcggaggcggcggcggcgg 9233950
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 7183104 cgaggcggcggcggcggcggcgga 7183127
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1198 ggaggcggcggcggcggatgcggccagc 1225
||||||||||||||||| |||||||||
Sbjct: 5359545 ggaggcggcggcggcggcggcggccagc 5359572
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 2012184 cgaggcggaggcggcggcggcgg 2012206
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 28267162 gaggcggaggcggcggcggcgg 28267183
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 23038024 gaggcggaggcggcggcggcgg 23038003
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 20576176 gaggcggaggcggcggcggcgg 20576197
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1190 gtcgaggcggaggcggcggcgg 1211
||||||||||||||||||||||
Sbjct: 2299834 gtcgaggcggaggcggcggcgg 2299813
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcg 1213
|||||||||||||||||||||
Sbjct: 26565964 gaggcggaggcggcggcggcg 26565984
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 10349625 gtgacggtgatcagctcgtcg 10349605
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 1083760 ggcggaggcggcggcggcgga 1083740
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggcc 1222
||||||||| |||||||||||||||
Sbjct: 1068456 ggaggcggccgcggcggatgcggcc 1068432
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 790405 ggcggaggcggcggcggcgga 790425
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 24510602 ggcggaggcggcggcggcgg 24510583
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21348243 ggcggaggcggcggcggcgg 21348262
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 21198277 ggcggaggcggcggcggcgg 21198296
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 19350042 cgaggcggcggcggcggcggcgga 19350065
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 84 cccgctccgtcgtcgtcgtccccgccgc 111
||||| |||||||||||||| |||||||
Sbjct: 10773496 cccgcgccgtcgtcgtcgtcgccgccgc 10773469
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 16301033 cgaggcggaggcggcggcggcgg 16301055
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 21580722 gaggcggaggcggcggcggcgg 21580701
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatg 1217
||||||||||||||||||||||
Sbjct: 8516396 gcggaggcggcggcggcggatg 8516375
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 18760789 ggcggcggcggcggcggcggatgcg 18760813
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 14790542 gtgacggtgatcagctcgtcg 14790522
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 2816353 ggcggaggcggcggcggcgga 2816333
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 84 cccgctccgtcgtcgtcgtccccgccgc 111
||||| |||||||||||||| |||||||
Sbjct: 20895486 cccgcgccgtcgtcgtcgtcaccgccgc 20895513
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 19064397 ggaggcggcggcggcggaggcggc 19064374
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 19050125 ggaggcggcggcggcggaggcggc 19050102
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 18146531 ggcggaggcggcggcggcgg 18146512
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1188 acgtcgaggcggaggcggcg 1207
||||||||||||||||||||
Sbjct: 18146481 acgtcgaggcggaggcggcg 18146462
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16051490 ggcggaggcggcggcggcgg 16051509
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 15987323 ggcggaggcggcggcggcgg 15987304
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 15592206 ggcggaggcggcggcggcgg 15592187
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 15314401 gcggaggcggcggcggcgga 15314382
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 14792921 cgaggcggcggcggcggcggcgga 14792898
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 829 cgccgcggccatggcggcgg 848
||||||||||||||||||||
Sbjct: 11431932 cgccgcggccatggcggcgg 11431951
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 5315206 gaggcggaggcggcggcggc 5315225
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 11206042 gcggaggcggcggcggcggatgtggcc 11206016
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcg 847
||||||||||||||||||||||
Sbjct: 25792583 ggacgccgcggccatggcggcg 25792562
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 10514654 gaggcggaggcggcggcggcgg 10514675
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 19170499 ggcggcggcggcggatgcggc 19170479
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 10211210 ggcggaggcggcggcggcgga 10211190
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 2593780 ggcggcggcggcggatgcggc 2593800
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 26415336 cgaggcggcggcggcggcggcgga 26415359
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23974480 ggcggaggcggcggcggcgg 23974461
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 22640438 cgaggcggaggcggcggcgg 22640419
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 9310377 cgaggcggaggcggcggcgg 9310396
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1202 gcggcggcggcggatgcggc 1221
||||||||||||||||||||
Sbjct: 4745761 gcggcggcggcggatgcggc 4745780
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2665680 ggcggaggcggcggcggcgg 2665699
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 46.1 bits (23), Expect = 0.056
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatgcggcc 1222
|||||||||||||||||||||| ||||
Sbjct: 11205713 gcggaggcggcggcggcggatgtggcc 11205687
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 826 ggacgccgcggccatggcggcg 847
||||||||||||||||||||||
Sbjct: 25720759 ggacgccgcggccatggcggcg 25720738
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 10514536 gaggcggaggcggcggcggcgg 10514557
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 19096726 ggcggcggcggcggatgcggc 19096706
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 10211092 ggcggaggcggcggcggcgga 10211072
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1201 ggcggcggcggcggatgcggc 1221
|||||||||||||||||||||
Sbjct: 2593724 ggcggcggcggcggatgcggc 2593744
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 26343505 cgaggcggcggcggcggcggcgga 26343528
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 23902686 ggcggaggcggcggcggcgg 23902667
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 22568629 cgaggcggaggcggcggcgg 22568610
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcgg 1211
||||||||||||||||||||
Sbjct: 9310262 cgaggcggaggcggcggcgg 9310281
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1202 gcggcggcggcggatgcggc 1221
||||||||||||||||||||
Sbjct: 4745742 gcggcggcggcggatgcggc 4745761
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 2665624 ggcggaggcggcggcggcgg 2665643
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 46.1 bits (23), Expect = 0.056
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1192 cgaggcggaggcggcggcggcgg 1214
|||||||||||||||||||||||
Sbjct: 16309274 cgaggcggaggcggcggcggcgg 16309296
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 21592385 gaggcggaggcggcggcggcgg 21592364
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatg 1217
||||||||||||||||||||||
Sbjct: 8521495 gcggaggcggcggcggcggatg 8521474
Score = 42.1 bits (21), Expect = 0.87
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcggatgcg 1219
||||| |||||||||||||||||||
Sbjct: 18771643 ggcggcggcggcggcggcggatgcg 18771667
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 746 gtgacggtgatcagctcgtcg 766
|||||||||||||||||||||
Sbjct: 14798783 gtgacggtgatcagctcgtcg 14798763
Score = 42.1 bits (21), Expect = 0.87
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgga 1215
|||||||||||||||||||||
Sbjct: 2816304 ggcggaggcggcggcggcgga 2816284
Score = 40.1 bits (20), Expect = 3.4
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 84 cccgctccgtcgtcgtcgtccccgccgc 111
||||| |||||||||||||| |||||||
Sbjct: 20906750 cccgcgccgtcgtcgtcgtcaccgccgc 20906777
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 19075651 ggaggcggcggcggcggaggcggc 19075628
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1198 ggaggcggcggcggcggatgcggc 1221
|||||||||||||||||| |||||
Sbjct: 19061379 ggaggcggcggcggcggaggcggc 19061356
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 18155784 ggcggaggcggcggcggcgg 18155765
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1188 acgtcgaggcggaggcggcg 1207
||||||||||||||||||||
Sbjct: 18155734 acgtcgaggcggaggcggcg 18155715
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 16059731 ggcggaggcggcggcggcgg 16059750
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 15995564 ggcggaggcggcggcggcgg 15995545
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1195 ggcggaggcggcggcggcgg 1214
||||||||||||||||||||
Sbjct: 15600447 ggcggaggcggcggcggcgg 15600428
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcgga 1215
||||||||||||||||||||
Sbjct: 15322642 gcggaggcggcggcggcgga 15322623
Score = 40.1 bits (20), Expect = 3.4
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1192 cgaggcggaggcggcggcggcgga 1215
|||||||| |||||||||||||||
Sbjct: 14801162 cgaggcggcggcggcggcggcgga 14801139
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 829 cgccgcggccatggcggcgg 848
||||||||||||||||||||
Sbjct: 11438372 cgccgcggccatggcggcgg 11438391
Score = 40.1 bits (20), Expect = 3.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1193 gaggcggaggcggcggcggc 1212
||||||||||||||||||||
Sbjct: 5315993 gaggcggaggcggcggcggc 5316012
>gb|AQ258029.1|AQ258029 nbxb0019H23f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0019H23f, DNA sequence
Length = 757
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1189 cgtcgaggcggaggcggcggcggcgg 1214
||||||||||| ||||||||||||||
Sbjct: 26 cgtcgaggcggtggcggcggcggcgg 51
>gb|AQ860402.1|AQ860402 nbeb0015I07f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0015I07f, DNA sequence
Length = 512
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 238 gaggcggaggcggcggcggcgg 217
>gb|AQ912567.1|AQ912567 nbeb0037L19r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0037L19r, DNA sequence
Length = 479
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 273 gaggcggaggcggcggcggcgg 252
>gb|AY873243.1|AY873243 04ET3_288_A_010_013_028G10 Oryza sativa (japonica cultivar-group)
transposon insertional mutants Oryza sativa (japonica
cultivar-group) genomic clone 04ET3_288_A_010_013_028G10,
DNA sequence
Length = 716
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1194 aggcggaggcggcggcggcgga 1215
||||||||||||||||||||||
Sbjct: 527 aggcggaggcggcggcggcgga 548
>gb|D23495.1|D23495 RICC2904A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2904_1A, mRNA sequence
Length = 349
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 29 gaggcggaggcggcggcggcgg 8
>gb|AU031122.1|AU031122 AU031122 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60906_1A,
mRNA sequence
Length = 349
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1196 gcggaggcggcggcggcggatg 1217
||||||||||||||||||||||
Sbjct: 93 gcggaggcggcggcggcggatg 72
>gb|AU070000.1|AU070000 AU070000 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31640_5A, mRNA sequence
Length = 331
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 59 gaggcggaggcggcggcggcgg 38
>gb|AU077742.1|AU077742 AU077742 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10143_2Z, mRNA sequence
Length = 470
Score = 44.1 bits (22), Expect = 0.22
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1157 taccgcttcgtcgtcgacgtcgccgg 1182
|||||||||||| |||||||||||||
Sbjct: 174 taccgcttcgtcatcgacgtcgccgg 199
>gb|AU081251.1|AU081251 AU081251 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52103_7A, mRNA sequence
Length = 411
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 56 gaggcggaggcggcggcggcgg 35
>gb|BE039231.1|BE039231 OA01G04 OA Oryza sativa (japonica cultivar-group) cDNA 5', mRNA
sequence
Length = 605
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 62 gaggcggaggcggcggcggcgg 41
>gb|AU161123.1|AU161123 AU161123 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53525, mRNA sequence
Length = 442
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 58 gaggcggaggcggcggcggcgg 37
>gb|AU163566.1|AU163566 AU163566 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1845, mRNA sequence
Length = 428
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 42 gaggcggaggcggcggcggcgg 21
>gb|AU166163.1|AU166163 AU166163 Rice immature leaf including apical meristem (under long day
condition) Oryza sativa (japonica cultivar-group) cDNA
clone E50169, mRNA sequence
Length = 373
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1193 gaggcggaggcggcggcggcgg 1214
||||||||||||||||||||||
Sbjct: 56 gaggcggaggcggcggcggcgg 35
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,480,319
Number of Sequences: 438736
Number of extensions: 3480319
Number of successful extensions: 139159
Number of sequences better than 10.0: 1112
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75869
Number of HSP's gapped (non-prelim): 62312
length of query: 1516
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1495
effective length of database: 2,791,206,460
effective search space: 4172853657700
effective search space used: 4172853657700
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)