BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829501.2.1
(1141 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 502 e-139
gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 ... 502 e-139
ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 502 e-139
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 502 e-139
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 502 e-139
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) c... 488 e-135
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 488 e-135
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 488 e-135
dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group)... 246 2e-062
dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA... 246 2e-062
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 246 2e-062
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 246 2e-062
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 246 2e-062
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 246 2e-062
gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) c... 238 5e-060
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 238 5e-060
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 238 5e-060
gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (j... 212 3e-052
gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (j... 212 3e-052
gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (j... 212 3e-052
dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group)... 212 3e-052
dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA... 212 3e-052
dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA... 212 3e-052
dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA... 212 3e-052
dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA... 212 3e-052
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 212 3e-052
emb|X56063.1|OSENDO O.sativa mRNA for endochitinase 212 3e-052
gb|D39758.1|D39758 RICS1345A Rice shoot Oryza sativa (japon... 192 3e-046
gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressin... 186 2e-044
gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmCh... 178 4e-042
gb|C98575.1|C98575 C98575 Rice panicle at flowering stage O... 165 7e-038
gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library O... 157 2e-035
gb|AU077767.1|AU077767 AU077767 Rice cDNA from young root O... 157 2e-035
gb|CB000861.1|CB000861 S345K_B10 Rice cold stress germinati... 157 2e-035
gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressin... 157 2e-035
gb|CF331229.1|CF331229 NACL--07-E08.g1 Rice callus plasmid ... 157 2e-035
gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing... 149 4e-033
gb|CF331228.1|CF331228 NACL--07-E08.b1 Rice callus plasmid ... 149 4e-033
gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (ja... 145 6e-032
gb|AU077766.1|AU077766 AU077766 Rice cDNA from young root O... 143 2e-031
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 143 2e-031
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 143 2e-031
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 143 2e-031
gb|AU090548.1|AU090548 AU090548 Rice panicle at flowering s... 131 9e-028
gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA O... 129 4e-027
dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group)... 129 4e-027
dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA... 129 4e-027
emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase 129 4e-027
gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flow... 123 2e-025
dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA... 123 2e-025
gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11... 123 2e-025
gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) c... 123 2e-025
ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chi... 123 2e-025
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 123 2e-025
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 123 2e-025
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|CA755067.1|CA755067 BR030012000_PLATE_C07_51_050.ab1 OA ... 115 5e-023
gb|C27564.1|C27564 C27564 Rice callus cDNA Oryza sativa (ja... 109 3e-021
gb|CA754928.1|CA754928 BR030009000_PLATE_A07_49_051.ab1 OA ... 107 1e-020
gb|AACV01022034.1| Oryza sativa (japonica cultivar-group) c... 101 8e-019
ref|NM_197598.1| Oryza sativa (japonica cultivar-group) put... 101 8e-019
gb|AU097549.2|AU097549 AU097549 Rice shoot Oryza sativa (ja... 96 5e-017
gb|AU163507.1|AU163507 AU163507 Rice panicle at flowering s... 90 3e-015
dbj|AK059871.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
dbj|AK099355.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
gb|AACV01005819.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 90 3e-015
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 90 3e-015
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 90 3e-015
gb|CF305640.1|CF305640 HDA1--01-E18.g1 OsHDAC1-overexpressi... 88 1e-014
dbj|AK063062.1| Oryza sativa (japonica cultivar-group) cDNA... 88 1e-014
gb|AACV01000748.1| Oryza sativa (japonica cultivar-group) c... 88 1e-014
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 88 1e-014
ref|NM_183568.1| Oryza sativa (japonica cultivar-group), p... 88 1e-014
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 88 1e-014
dbj|AP002070.1| Oryza sativa (japonica cultivar-group) geno... 88 1e-014
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 88 1e-014
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 88 1e-014
gb|AU062649.1|AU062649 AU062649 Rice callus Oryza sativa (j... 74 2e-010
dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA... 72 7e-010
dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA... 72 7e-010
gb|AC137616.2| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|AACV01010846.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|C73178.1|C73178 C73178 Rice panicle at flowering stage O... 66 5e-008
gb|C73844.1|C73844 C73844 Rice panicle (longer than 10cm) O... 66 5e-008
gb|C93677.1|C93677 C93677 Rice panicle at flowering stage O... 66 5e-008
gb|C98979.1|C98979 C98979 Rice panicle at flowering stage O... 66 5e-008
gb|C98982.1|C98982 C98982 Rice panicle at flowering stage O... 66 5e-008
gb|AU029818.1|AU029818 AU029818 Rice panicle (between 3cm t... 66 5e-008
gb|AU064098.1|AU064098 AU064098 Rice panicle at flowering s... 66 5e-008
gb|AU064153.1|AU064153 AU064153 Rice panicle at flowering s... 66 5e-008
gb|AU064159.1|AU064159 AU064159 Rice panicle at flowering s... 66 5e-008
gb|AU064210.1|AU064210 AU064210 Rice panicle at flowering s... 66 5e-008
gb|AU064215.1|AU064215 AU064215 Rice panicle (longer than 1... 66 5e-008
gb|AU064317.1|AU064317 AU064317 Rice panicle (longer than 1... 66 5e-008
gb|AU064584.1|AU064584 AU064584 Rice panicle (between 3cm t... 66 5e-008
gb|AU064700.1|AU064700 AU064700 Rice panicle (between 3cm t... 66 5e-008
gb|AU064767.1|AU064767 AU064767 Rice panicle (between 3cm t... 66 5e-008
gb|AU064786.1|AU064786 AU064786 Rice panicle (between 3cm t... 66 5e-008
gb|AU065078.1|AU065078 AU065078 Rice panicle (between 3cm t... 66 5e-008
gb|AU065147.1|AU065147 AU065147 Rice panicle (between 3cm t... 66 5e-008
gb|AU064680.2|AU064680 AU064680 Rice panicle (between 3cm t... 66 5e-008
gb|AU094171.1|AU094171 AU094171 Rice panicle at flowering s... 66 5e-008
gb|AU094179.1|AU094179 AU094179 Rice panicle at flowering s... 66 5e-008
gb|AU094218.1|AU094218 AU094218 Rice panicle at flowering s... 66 5e-008
gb|AU094274.1|AU094274 AU094274 Rice panicle at flowering s... 66 5e-008
gb|AU094299.1|AU094299 AU094299 Rice panicle at flowering s... 66 5e-008
gb|AU163674.1|AU163674 AU163674 Rice panicle at flowering s... 66 5e-008
gb|AU163676.1|AU163676 AU163676 Rice panicle at flowering s... 66 5e-008
gb|AU163707.1|AU163707 AU163707 Rice panicle at flowering s... 66 5e-008
gb|AU164213.1|AU164213 AU164213 Rice panicle (longer than 1... 66 5e-008
gb|AU164221.1|AU164221 AU164221 Rice panicle (longer than 1... 66 5e-008
gb|C73532.2|C73532 C73532 Rice panicle at flowering stage O... 66 5e-008
gb|AU064183.2|AU064183 AU064183 Rice panicle at flowering s... 66 5e-008
gb|AU225163.1|AU225163 AU225163 Oryza sativa Koshihikari pi... 66 5e-008
gb|AU225308.1|AU225308 AU225308 Oryza sativa Koshihikari pi... 66 5e-008
gb|AU225385.1|AU225385 AU225385 Oryza sativa Koshihikari pi... 66 5e-008
gb|CV721037.1|CV721037 YBH--02-K21.b1 Rice before heading y... 66 5e-008
gb|CV721419.1|CV721419 YBH--04-A22.b1 Rice before heading y... 66 5e-008
gb|CV721876.1|CV721876 YBH--05-K04.b1 Rice before heading y... 66 5e-008
gb|AU064955.2|AU064955 AU064955 Rice panicle (between 3cm t... 66 5e-008
dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia... 66 5e-008
dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA... 66 5e-008
gb|AC135418.3| Oryza sativa (japonica cultivar-group) chrom... 66 5e-008
gb|CV720804.1|CV720804 YBH--01-O12.b1 Rice before heading y... 64 2e-007
gb|CV720613.1|CV720613 YBH--01-D18.b1 Rice before heading y... 62 7e-007
gb|AU064046.1|AU064046 AU064046 Rice panicle at flowering s... 60 3e-006
gb|AU064233.1|AU064233 AU064233 Rice panicle (longer than 1... 58 1e-005
gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering s... 58 1e-005
gb|BE039205.1|BE039205 OA01C05 OA Oryza sativa (japonica cu... 58 1e-005
gb|CV721378.1|CV721378 YBH--03-O11.b1 Rice before heading y... 58 1e-005
dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia... 58 1e-005
dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_473013.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromoso... 58 1e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|CV721808.1|CV721808 YBH--05-G11.b1 Rice before heading y... 56 4e-005
gb|AU090556.1|AU090556 AU090556 Rice panicle at flowering s... 52 7e-004
gb|AU183057.1|AU183057 AU183057 Rice panicle (between 3cm t... 52 7e-004
gb|CV721056.1|CV721056 YBH--02-L19.b1 Rice before heading y... 52 7e-004
gb|CV721323.1|CV721323 YBH--03-L02.b1 Rice before heading y... 52 7e-004
gb|CV721328.1|CV721328 YBH--03-L07.b1 Rice before heading y... 52 7e-004
gb|CV721450.1|CV721450 YBH--04-C19.b1 Rice before heading y... 52 7e-004
gb|CV721517.1|CV721517 YBH--04-G06.b1 Rice before heading y... 52 7e-004
gb|CF311468.1|CF311468 ABF--06-L04.b1 ABF3-overexpressing t... 48 0.011
gb|AU069855.1|AU069855 AU069855 Rice panicle at flowering s... 46 0.042
gb|AU090553.1|AU090553 AU090553 Rice panicle at flowering s... 46 0.042
gb|AU174453.1|AU174453 AU174453 Rice cDNA from seed Oryza s... 46 0.042
gb|CV721649.1|CV721649 YBH--04-N12.b1 Rice before heading y... 46 0.042
gb|M24504.1|RICLECTIN Oryza sativa lectin mRNA, complete cds 46 0.042
gb|AF140679.1|AF140679 Oryza sativa subsp. japonica cultiva... 46 0.042
gb|AF140682.1|AF140682 Oryza sativa subsp. japonica cultiva... 46 0.042
dbj|AK103206.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.042
gb|AACV01008831.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
ref|XM_474630.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|NT_107202.1| Oryza sativa (japonica cultivar-group) 46 0.042
gb|CH401188.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC O... 46 0.042
emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromoso... 46 0.042
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 46 0.042
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|AU065129.1|AU065129 AU065129 Rice panicle (between 3cm t... 44 0.17
gb|AU197269.2|AU197269 AU197269 Rice panicle at flowering s... 44 0.17
gb|AACV01026910.1| Oryza sativa (japonica cultivar-group) C... 44 0.17
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
sequence
Length = 153247
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 95471 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 95412
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 95411 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 95352
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 95351 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 95292
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 95291 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 95232
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 95231 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 95172
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 95171 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 95112
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 95111 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 95052
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 95051 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 94992
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 94991 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 94932
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 94931 cgtctgcgcaaggaacgcggcgacctcgcgctt 94899
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 94679 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 94620
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 94619 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 94560
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 94559 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 94500
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 94869 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 94810
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 94809 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 94761
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
sequence
Length = 115326
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 36822 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 36763
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 36762 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 36703
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 36702 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 36643
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 36642 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 36583
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 36582 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 36523
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 36522 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 36463
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 36462 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 36403
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 36402 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 36343
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 36342 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 36283
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 36282 cgtctgcgcaaggaacgcggcgacctcgcgctt 36250
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 36030 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 35971
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 35970 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 35911
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 35910 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 35851
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 36220 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 36161
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 36160 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 36112
>ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 981
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 972 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 913
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 912 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 853
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 852 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 793
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 792 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 733
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 732 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 673
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 672 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 613
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 612 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 553
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 552 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 493
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 492 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 433
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 432 cgtctgcgcaaggaacgcggcgacctcgcgctt 400
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 180 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 121
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 120 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 61
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 60 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 1
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 370 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 311
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 310 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 262
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 683815 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 683756
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 683755 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 683696
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 683695 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 683636
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 683635 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 683576
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 683575 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 683516
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 683515 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 683456
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 683455 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 683396
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 683395 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 683336
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 683335 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 683276
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 683275 cgtctgcgcaaggaacgcggcgacctcgcgctt 683243
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 683023 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 682964
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 682963 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 682904
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 682903 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 682844
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 683213 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 683154
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 683153 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 683105
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 17197647 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17197588
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 17197587 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 17197528
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 17197527 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 17197468
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 17197467 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 17197408
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 17197407 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 17197348
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 17197347 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 17197288
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 17197287 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17197228
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 17197227 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 17197168
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 17197167 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 17197108
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 17197107 cgtctgcgcaaggaacgcggcgacctcgcgctt 17197075
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 17196855 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 17196796
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 17196795 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 17196736
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 17196735 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 17196676
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 17197045 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 17196986
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 17196985 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 17196937
Score = 89.7 bits (45), Expect = 3e-015
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
||||||||||||||||||||| | | ||||||||| || ||||| |||| | ||||
Sbjct: 1841832 ccgccgttgatgatgttggtggccatgccgtagccggggagcctcccggagctacggtca 1841773
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
| |||| ||||||||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 1841772 tcgccggacggcgtccactggttggtgattacgtcgtggcacgacggcttgggtgactgc 1841713
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
| ||||||||||||||||| ||| ||| ||||| ||| ||||||| | | |||||||
Sbjct: 1841712 gccgtcatccagaaccagatggccgtcctgaacgccaccacggggtcgcttgacaccagg 1841653
Query: 461 tccgggttg 469
|| ||||||
Sbjct: 1841652 tcggggttg 1841644
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 502 bits (253), Expect = e-139
Identities = 493/573 (86%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 17204078 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17204019
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 17204018 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 17203959
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 17203958 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 17203899
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 17203898 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 17203839
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 17203838 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 17203779
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 17203778 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 17203719
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 17203718 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17203659
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 17203658 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 17203599
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgtctcgtggga 696
||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 17203598 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccggtggtctcgtggga 17203539
Query: 697 cgtctgcgccaggaacgccgccagctcgcgctt 729
||||||||| |||||||| || | |||||||||
Sbjct: 17203538 cgtctgcgcaaggaacgcggcgacctcgcgctt 17203506
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 17203286 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 17203227
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 17203226 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 17203167
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 17203166 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 17203107
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
||||||||||||| ||| |||| || |||| |||| | |||||||||||||| | |||
Sbjct: 17203476 cgaagcccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctgg 17203417
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 17203416 ccgggcacgccgcatcgttgcggtggagcagcatctggtcgaagagcga 17203368
Score = 89.7 bits (45), Expect = 3e-015
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
||||||||||||||||||||| | | ||||||||| || ||||| |||| | ||||
Sbjct: 1841834 ccgccgttgatgatgttggtggccatgccgtagccggggagcctcccggagctacggtca 1841775
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
| |||| ||||||||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 1841774 tcgccggacggcgtccactggttggtgattacgtcgtggcacgacggcttgggtgactgc 1841715
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
| ||||||||||||||||| ||| ||| ||||| ||| ||||||| | | |||||||
Sbjct: 1841714 gccgtcatccagaaccagatggccgtcctgaacgccaccacggggtcgcttgacaccagg 1841655
Query: 461 tccgggttg 469
|| ||||||
Sbjct: 1841654 tcggggttg 1841646
>gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006925, whole
genome shotgun sequence
Length = 31428
Score = 488 bits (246), Expect = e-135
Identities = 493/574 (85%), Gaps = 1/574 (0%)
Strand = Plus / Plus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 22922 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 22981
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 22982 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 23041
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 23042 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 23101
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 23102 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 23161
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 23162 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 23221
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 23222 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 23281
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 23282 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 23341
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 23342 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 23401
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc-cgtcgtctcgtggg 695
||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 23402 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccgggtggtctcgtggg 23461
Query: 696 acgtctgcgccaggaacgccgccagctcgcgctt 729
|||||||||| |||||||| || | |||||||||
Sbjct: 23462 acgtctgcgcaaggaacgcggcgacctcgcgctt 23495
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 23717 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 23776
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 23777 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 23836
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 23837 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 23896
Score = 73.8 bits (37), Expect = 2e-010
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 761 cccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttggcgggg 820
|||||||| ||| |||| || |||| |||| | |||||||||||||| | |||| |||
Sbjct: 23531 cccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctggccggg 23590
Query: 821 cacgccgcgtc-gttgcggtgcagcagcatctggttgaagagcga 864
|||||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 23591 cacgccgcatccgttgcggtggagcagcatctggtcgaagagcga 23635
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 488 bits (246), Expect = e-135
Identities = 493/574 (85%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 3886608 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 3886549
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 3886548 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 3886489
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 3886488 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 3886429
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 3886428 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 3886369
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 3886368 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 3886309
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 3886308 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 3886249
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 3886248 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 3886189
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 3886188 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 3886129
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc-cgtcgtctcgtggg 695
||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 3886128 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccgggtggtctcgtggg 3886069
Query: 696 acgtctgcgccaggaacgccgccagctcgcgctt 729
|||||||||| |||||||| || | |||||||||
Sbjct: 3886068 acgtctgcgcaaggaacgcggcgacctcgcgctt 3886035
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 3885813 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 3885754
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 3885753 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 3885694
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 3885693 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 3885634
Score = 73.8 bits (37), Expect = 2e-010
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 761 cccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttggcgggg 820
|||||||| ||| |||| || |||| |||| | |||||||||||||| | |||| |||
Sbjct: 3885999 cccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctggccggg 3885940
Query: 821 cacgccgcgtc-gttgcggtgcagcagcatctggttgaagagcga 864
|||||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 3885939 cacgccgcatccgttgcggtggagcagcatctggtcgaagagcga 3885895
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 488 bits (246), Expect = e-135
Identities = 493/574 (85%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 157 gaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcaca 216
||||||| ||||| || ||| ||||||||| || |||||||||| || || | ||| ||
Sbjct: 17937315 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17937256
Query: 217 gtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactc 276
||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 17937255 gtagcgcttgtagaagccgatccggtcggcgacgcgatcgtcctcgccatggccgcactc 17937196
Query: 277 gaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgt 336
|| |||||||||||||||||||||| ||||||||||||||||| | ||| || |||
Sbjct: 17937195 cagcccgccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctg 17937136
Query: 337 gtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcga 396
||| | ||||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct: 17937135 gtcgtcggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcga 17937076
Query: 397 ctgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccac 456
||||||||||||||||||||||| ||| || ||||| || ||||||| ||||| |||||
Sbjct: 17937075 ctgcggcgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccac 17937016
Query: 457 caggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgta 516
|||||||||| | |||| | | |||||||||||||||| || || |||||||||||| |
Sbjct: 17937015 gaggtccgggtcgccgagcaggtcggcgccgatggcctgccccgccggcccgtagttgaa 17936956
Query: 517 gttgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggcca 576
||||||||| | ||||||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 17936955 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17936896
Query: 577 ctgggcgctgggctcgcagtagtccggccccgacgcgccgccctgctcctccttgaagca 636
||| ||||| ||| ||||||||||||||| | |||||||| | |||||||||||||||
Sbjct: 17936895 ctgcgcgctctgctggcagtagtccggcccggcggcgccgccgttctcctccttgaagca 17936836
Query: 637 gtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc-cgtcgtctcgtggg 695
||||||||| |||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 17936835 gtagccccacgcgtaggggccgtcgggcgccgtcgcccacccgccgggtggtctcgtggg 17936776
Query: 696 acgtctgcgccaggaacgccgccagctcgcgctt 729
|||||||||| |||||||| || | |||||||||
Sbjct: 17936775 acgtctgcgcaaggaacgcggcgacctcgcgctt 17936742
Score = 127 bits (64), Expect = 1e-026
Identities = 153/180 (85%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||| | | ||||||||| ||||||||
Sbjct: 17936520 gcactggctctggcatccggcgccgcagtagtcggaggtggagccgcaccagccgaactg 17936461
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 17936460 gctgcagcagaggcagttggggcacaccgcgccgccggcctggctgccgcactgctcggc 17936401
Query: 1049 gcgagcgggcacagcgaagaagg-cgtggccagcatggccaccaccgccagggctctcat 1107
| ||| | | |||| ||||| |||||||| |||||||||||| || || ||||||||
Sbjct: 17936400 atgcacggccgccgcgaggaaggccgtggccaccatggccaccacagcgagcgctctcat 17936341
Score = 89.7 bits (45), Expect = 3e-015
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
||||||||||||||||||||| | | ||||||||| || ||||| |||| | ||||
Sbjct: 2061864 ccgccgttgatgatgttggtggccatgccgtagccggggagcctcccggagctacggtca 2061805
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
| |||| ||||||||||| || || ||||||||||||||||||||||| ||||||
Sbjct: 2061804 tcgccggacggcgtccactggttggtgattacgtcgtggcacgacggcttgggtgactgc 2061745
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
| ||||||||||||||||| ||| ||| ||||| ||| ||||||| | | |||||||
Sbjct: 2061744 gccgtcatccagaaccagatggccgtcctgaacgccaccacggggtcgcttgacaccagg 2061685
Query: 461 tccgggttg 469
|| ||||||
Sbjct: 2061684 tcggggttg 2061676
Score = 73.8 bits (37), Expect = 2e-010
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 761 cccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttggcgggg 820
|||||||| ||| |||| || |||| |||| | |||||||||||||| | |||| |||
Sbjct: 17936706 cccgggaaggcgctggcggcggcgacgaaggcgtcgtaggtgtagaagttgctggccggg 17936647
Query: 821 cacgccgcgtc-gttgcggtgcagcagcatctggttgaagagcga 864
|||||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 17936646 cacgccgcatccgttgcggtggagcagcatctggtcgaagagcga 17936602
>dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group) Cht-3 gene for endochitinase,
complete cds
Length = 2808
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 2781 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 2722
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 2721 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 2662
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 2661 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 2602
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 2601 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 2542
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 2541 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 2482
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 2481 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 2422
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 2421 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 2362
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 2321 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 2262
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 2261 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 2202
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 2201 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 2142
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 2141 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 2082
Query: 862 cga 864
|||
Sbjct: 2081 cga 2079
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 2003 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 1944
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 1943 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 1884
Query: 1049 gcg 1051
|||
Sbjct: 1883 gcg 1881
>dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F06, full
insert sequence
Length = 1169
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 1026 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 967
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 966 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 907
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 906 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 847
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 846 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 787
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 786 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 727
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 726 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 667
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 666 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 607
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 566 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 507
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 506 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 447
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 446 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 387
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 386 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 327
Query: 862 cga 864
|||
Sbjct: 326 cga 324
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 248 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 189
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 188 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 129
Query: 1049 gcg 1051
|||
Sbjct: 128 gcg 126
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 9700 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 9641
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 9640 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 9581
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 9580 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 9521
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 9520 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 9461
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 9460 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 9401
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 9400 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 9341
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 9340 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 9281
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 13119 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 13060
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 13059 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 13000
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 12999 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 12940
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 12939 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 12889
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 9240 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 9181
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 9180 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 9121
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 9120 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 9061
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 9060 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 9001
Query: 862 cga 864
|||
Sbjct: 9000 cga 8998
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 13314 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 13255
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 13254 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 13195
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 13194 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 13148
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 12846 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 12787
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 12786 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 12739
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 8922 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 8863
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 8862 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 8803
Query: 1049 gcg 1051
|||
Sbjct: 8802 gcg 8800
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 12712 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 12653
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 12652 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 12604
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 12534 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 12475
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 12474 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 12415
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 12414 ctgctcgccgcg 12403
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0548E04
Length = 138037
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 118934 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 118875
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 118874 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 118815
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 118814 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 118755
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 118754 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 118695
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 118694 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 118635
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 118634 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 118575
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 118574 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 118515
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 122353 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 122294
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 122293 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 122234
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 122233 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 122174
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 122173 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 122123
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 118474 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 118415
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 118414 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 118355
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 118354 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 118295
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 118294 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 118235
Query: 862 cga 864
|||
Sbjct: 118234 cga 118232
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 122548 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 122489
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 122488 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 122429
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 122428 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 122382
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 122080 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 122021
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 122020 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 121973
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 118156 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 118097
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 118096 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 118037
Query: 1049 gcg 1051
|||
Sbjct: 118036 gcg 118034
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 121946 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 121887
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 121886 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 121838
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 121768 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 121709
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 121708 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 121649
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 121648 ctgctcgccgcg 121637
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 9700 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 9641
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 9640 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 9581
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 9580 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 9521
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 9520 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 9461
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 9460 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 9401
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 9400 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 9341
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 9340 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 9281
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 13119 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 13060
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 13059 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 13000
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 12999 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 12940
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 12939 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 12889
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 9240 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 9181
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 9180 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 9121
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 9120 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 9061
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 9060 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 9001
Query: 862 cga 864
|||
Sbjct: 9000 cga 8998
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 13314 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 13255
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 13254 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 13195
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 13194 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 13148
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 12846 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 12787
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 12786 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 12739
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 8922 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 8863
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 8862 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 8803
Query: 1049 gcg 1051
|||
Sbjct: 8802 gcg 8800
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 12712 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 12653
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 12652 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 12604
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 12534 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 12475
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 12474 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 12415
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 12414 ctgctcgccgcg 12403
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 246 bits (124), Expect = 2e-062
Identities = 346/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 30372339 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 30372280
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 30372279 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 30372220
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 30372219 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 30372160
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 30372159 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 30372100
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 30372099 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 30372040
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 30372039 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 30371980
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 30371979 tgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 30371920
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 30375758 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 30375699
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 30375698 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 30375639
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 30375638 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 30375579
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 30375578 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 30375528
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 30371879 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 30371820
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 30371819 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 30371760
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 30371759 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 30371700
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 30371699 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 30371640
Query: 862 cga 864
|||
Sbjct: 30371639 cga 30371637
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 30375953 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 30375894
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 30375893 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 30375834
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 30375833 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 30375787
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 30375485 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 30375426
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 30375425 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 30375378
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 30371561 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 30371502
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 30371501 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 30371442
Query: 1049 gcg 1051
|||
Sbjct: 30371441 gcg 30371439
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 30375351 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 30375292
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 30375291 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 30375243
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 30375173 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 30375114
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 30375113 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 30375054
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 30375053 ctgctcgccgcg 30375042
>gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014964, whole
genome shotgun sequence
Length = 4179
Score = 238 bits (120), Expect = 5e-060
Identities = 345/420 (82%)
Strand = Plus / Plus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 1032 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 1091
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 1092 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 1151
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 1152 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 1211
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 1212 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 1271
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 1272 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 1331
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 1332 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 1391
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||| ||||||||||| || ||||||||||||||||
Sbjct: 1392 tgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacggccact 1451
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Plus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 1492 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 1551
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 1552 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 1611
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 1612 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 1671
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 1672 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 1731
Query: 862 cga 864
|||
Sbjct: 1732 cga 1734
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 1810 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 1869
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 1870 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 1929
Query: 1049 gcg 1051
|||
Sbjct: 1930 gcg 1932
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 238 bits (120), Expect = 5e-060
Identities = 345/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 11703328 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 11703269
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 11703268 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 11703209
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 11703208 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 11703149
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 11703148 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 11703089
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 11703088 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 11703029
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 11703028 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 11702969
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||| ||||||||||| || ||||||||||||||||
Sbjct: 11702968 tgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacggccact 11702909
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 11707589 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 11707530
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 11707529 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 11707470
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 11707469 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 11707410
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 11707409 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 11707359
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 11702868 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 11702809
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 11702808 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 11702749
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 11702748 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 11702689
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 11702688 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 11702629
Query: 862 cga 864
|||
Sbjct: 11702628 cga 11702626
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 11707784 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 11707725
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 11707724 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 11707665
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 11707664 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 11707618
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 11707316 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 11707257
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 11707256 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 11707209
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 11702550 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 11702491
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 11702490 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 11702431
Query: 1049 gcg 1051
|||
Sbjct: 11702430 gcg 11702428
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 11707182 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 11707123
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 11707122 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 11707074
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 11707004 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 11706945
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 11706944 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 11706885
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 11706884 ctgctcgccgcg 11706873
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 238 bits (120), Expect = 5e-060
Identities = 345/420 (82%)
Strand = Plus / Minus
Query: 159 agggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagt 218
||||| |||||||| ||| |||| ||| ||||| |||||||| || |||| ||| ||||
Sbjct: 29402065 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 29402006
Query: 219 atcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcga 278
| || |||||||| |||||||||||||| || | ||| ||||| || |||||||| |
Sbjct: 29402005 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 29401946
Query: 279 ggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgt 338
|||||||||||||||||||||| ||||||||||||| | | || || ||| ||
Sbjct: 29401945 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 29401886
Query: 339 cagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgact 398
| | ||||| ||||||||||| || || || || ||||||||||||||||||||||||
Sbjct: 29401885 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 29401826
Query: 399 gcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccacca 458
||||||||||||||||||||| || |||| ||| || ||||||| ||| | |||||||
Sbjct: 29401825 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 29401766
Query: 459 ggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagt 518
||||||||||| ||| | | ||| |||||||||||| || || || |||||||||||||
Sbjct: 29401765 ggtccgggttgttgagcaggtcggagccgatggcctgccccgccgggccgtagttgtagt 29401706
Query: 519 tgtaggatatctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
|||||| ||||||||||| || ||||| ||||||||||| || ||||||||||||||||
Sbjct: 29401705 tgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacggccact 29401646
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 29406326 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 29406267
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 29406266 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 29406207
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 29406206 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 29406147
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 29406146 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 29406096
Score = 172 bits (87), Expect = 3e-040
Identities = 204/243 (83%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 29401605 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 29401546
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
|| |||||||||||||||||||||||||| || || | ||||||||| |||||
Sbjct: 29401545 ggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgcttgcaggtgtcggc 29401486
Query: 742 cgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggt 801
| || |||||| ||||| ||||| | |||||||| || |||| |||| | |||||||
Sbjct: 29401485 gtcgccggtggtggcgaagtccgggtaggcgttggcggcggcgacgaaggcgtcgtaggt 29401426
Query: 802 gtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagag 861
||||||||| || |||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 29401425 gtagaagcccttagcggcgcacgcctggtcgttgcggtggagcagcatctggtcgaagag 29401366
Query: 862 cga 864
|||
Sbjct: 29401365 cga 29401363
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 29406521 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 29406462
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 29406461 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 29406402
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 29406401 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 29406355
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 29406053 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 29405994
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 29405993 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 29405946
Score = 101 bits (51), Expect = 8e-019
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||| ||||| | | ||||||||| ||| ||||
Sbjct: 29401287 gcactggctctggcagccggcgccgcagtaatcggaggtggagccgcaccagccgtactg 29401228
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 29401227 gctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgcactgctcgcc 29401168
Query: 1049 gcg 1051
|||
Sbjct: 29401167 gcg 29401165
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 29405919 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 29405860
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 29405859 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 29405811
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 29405741 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 29405682
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 29405681 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 29405622
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 29405621 ctgctcgccgcg 29405610
>gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07C10 3', mRNA sequence
Length = 770
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Plus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 299 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 358
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 359 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 418
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 419 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 478
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 479 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 529
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Plus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 104 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 163
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 164 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 223
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 224 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 270
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Plus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 572 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 631
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 632 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 679
>gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 5', mRNA sequence
Length = 839
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 462 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 403
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 402 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 343
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 342 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 283
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 282 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 232
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 657 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 598
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 597 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 538
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 537 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 491
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 189 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 130
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 129 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 82
>gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 3', mRNA sequence
Length = 756
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Plus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 386 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 445
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 446 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 505
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 506 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 565
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 566 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 616
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Plus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 191 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 250
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 251 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 310
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 311 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 357
Score = 117 bits (59), Expect = 1e-023
Identities = 84/91 (92%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcg-cccacccgc 680
|||||||||||||||||||||||| | |||||| || ||||||||||||| |||||||||
Sbjct: 659 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgccccacccgc 718
Query: 681 ccgtcgtctcgtgggacgtctgcgccaggaa 711
|||| |||||||| |||||||||||||||||
Sbjct: 719 ccgtggtctcgtgcgacgtctgcgccaggaa 749
>dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group) Cht-1 gene for endochitinase,
complete cds
Length = 2739
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 2088 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 2029
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 2028 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 1969
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 1968 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 1909
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 1908 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 1858
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 2283 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 2224
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 2223 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 2164
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2163 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 2117
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 1815 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 1756
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 1755 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 1708
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 1681 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 1622
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 1621 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 1573
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 1503 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 1444
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 1443 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 1384
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 1383 ctgctcgccgcg 1372
>dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D05, full
insert sequence
Length = 1217
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 826 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 767
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 766 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 707
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 706 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 647
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 646 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 596
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 1021 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 962
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 961 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 902
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 901 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 855
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 553 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 494
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 493 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 446
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 419 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 360
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 359 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 311
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 241 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 182
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 181 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 122
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 121 ctgctcgccgcg 110
>dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I21, full
insert sequence
Length = 1174
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 804 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 745
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 744 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 685
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 684 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 625
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 624 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 574
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 999 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 940
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 939 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 880
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 879 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 833
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 531 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 472
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 471 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 424
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 397 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 338
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 337 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 289
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 219 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 160
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 159 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 100
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 99 ctgctcgccgcg 88
>dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C04, full
insert sequence
Length = 1136
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 823 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 764
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 763 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 704
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 703 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 644
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 643 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 593
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 1018 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 959
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 958 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 899
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 898 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 852
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 550 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 491
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 490 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 443
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 416 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 357
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 356 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 308
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 238 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 179
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 178 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 119
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 118 ctgctcgccgcg 107
>dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A08, full
insert sequence
Length = 1141
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 828 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 769
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 768 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 709
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 708 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 649
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 648 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 598
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 1023 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 964
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 963 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 904
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 903 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 857
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 555 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 496
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 495 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 448
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 421 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 362
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 361 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 313
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 243 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 184
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 183 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 124
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 123 ctgctcgccgcg 112
>gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014965, whole
genome shotgun sequence
Length = 41039
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 3180 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 3121
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 3120 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 3061
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 3060 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 3001
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 3000 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 2950
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 3375 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 3316
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 3315 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 3256
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 3255 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 3209
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 2907 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 2848
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 2847 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 2800
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 2773 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 2714
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 2713 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 2665
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 2595 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 2536
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 2535 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 2476
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 2475 ctgctcgccgcg 2464
>emb|X56063.1|OSENDO O.sativa mRNA for endochitinase
Length = 1160
Score = 212 bits (107), Expect = 3e-052
Identities = 200/231 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 723 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 664
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 663 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 604
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 603 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 544
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 543 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 493
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 918 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 859
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 858 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 799
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 798 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 752
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 450 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 391
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 390 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 343
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 316 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 257
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 256 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 208
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 138 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 79
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 78 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 19
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 18 ctgctcgccgcg 7
>gb|D39758.1|D39758 RICS1345A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 297
Score = 192 bits (97), Expect = 3e-046
Identities = 209/244 (85%), Gaps = 3/244 (1%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 267 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 208
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtcggg 741
||| |||||||| |||||||||||||||||||| || | |||||||| ||| || | |
Sbjct: 207 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgct--tgcgggtggcg 150
Query: 742 cg-cccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtagg 800
|| | || || ||| |||||| |||||| |||||||| || |||| |||| | ||||||
Sbjct: 149 cgtcgccggttgtggcgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtagg 90
Query: 801 tgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggttgaaga 860
|||||||| ||||| ||||||||||||||||||||||| || |||||||||| |||||
Sbjct: 89 tgtagaagttcttggccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaaga 30
Query: 861 gcga 864
||||
Sbjct: 29 gcga 26
>gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-N11, mRNA sequence
Length = 593
Score = 186 bits (94), Expect = 2e-044
Identities = 181/210 (86%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 220 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 161
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 160 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 101
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 100 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 41
Query: 529 ctggatgggcccgcggccgtagtacttctt 558
||||||||| || |||||||||||||||||
Sbjct: 40 ctggatgggtccccggccgtagtacttctt 11
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 415 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 356
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 355 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 296
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 295 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 249
>gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmChiI-34 mRNA, partial cds
Length = 894
Score = 178 bits (90), Expect = 4e-042
Identities = 195/230 (84%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 708 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggggtcat 649
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| || || ||||||| ||| | |||||||||||||||||
Sbjct: 648 ccagaaccagaacgccgtcttgagggagacggtggcgtccgacgccaccaggtccgggtt 589
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||| |||||||||||| ||
Sbjct: 588 gctcagcaggttggagccgatggcctgccccgccgggccgtagctgtagttgtaggtgat 529
Query: 529 ctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccact 578
||||||||| || ||||||||||||||||| || ||||||||||||||||
Sbjct: 528 ctggatgggtccccggccgtagtacttcttgccggcggcgcacggccact 479
Score = 147 bits (74), Expect = 2e-032
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 165 tctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtcacagtatcgtt 224
|||||||| ||||||||||||| ||||||||||||| || | || ||| ||||| || |
Sbjct: 892 tctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgct 833
Query: 225 tgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgcactcgaggccgc 284
||||||| || |||||||||||||| | |||||| ||||| ||||||||||| | |||||
Sbjct: 832 tgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgcactccacgccgc 773
Query: 285 cgttgatgatgttggtgacgacgccgtagcccgg 318
|||||||||||||||| || ||||||||||||||
Sbjct: 772 cgttgatgatgttggtcaccacgccgtagcccgg 739
Score = 135 bits (68), Expect = 6e-029
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||||| |||||| |||||||||||||| | ||| |||||
Sbjct: 438 ctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagccgcc 379
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
|| ||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 378 ggtggtctcgtgggacgtctgcgccaggaacgcggcgacctcgcgctt 331
Score = 101 bits (51), Expect = 8e-019
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| ||||||||| ||||| | | |||||||||
Sbjct: 126 gctgccggagcactggctctggcagccggagccgcagtaatcggaggtggagccgcacca 67
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
||| ||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 66 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctg 16
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 304 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 245
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 244 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 196
>gb|C98575.1|C98575 C98575 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0422_6Z, mRNA sequence
Length = 614
Score = 165 bits (83), Expect = 7e-038
Identities = 198/233 (84%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtgg-cacgacgg-cttgggcgactgcggcgtc 406
||||||||||||||| ||||| || ||||| |||||||| ||||||||| |||||||||
Sbjct: 245 gggcgtccactgccctgtcatcaccgcgtgggcacgacgggcttgggcgantgcggcgtc 186
Query: 407 atccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccggg 466
||||||||||||| || |||| ||| || | ||||| ||| | |||||||||||||||
Sbjct: 185 atccagaaccagaacgccgtcttgaaggaganggtggcgtccgacgccaccaggtccggg 126
Query: 467 ttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggat 526
||| || | | || |||||||||||| || || || ||||||||||||||||||||
Sbjct: 125 ttgctcagca-gttggagccgatggcctgccccgccgggccgtagttgtagttgtaggag 67
Query: 527 atctggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactg 579
||||||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 66 atctggatgggtccccggccgtagtacttcttgccggcggcgcacggccactg 14
Score = 143 bits (72), Expect = 2e-031
Identities = 145/168 (86%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 441 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 382
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 381 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 322
Query: 274 ctcgaggccgccgttgat-gatgttggtgacgacgccgtagcccggca 320
||| | |||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 321 ctccacgccgccgttgatggatgttggtcaccacgccgtagcccggca 274
>gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030E24f, DNA sequence
Length = 740
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Plus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 22 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 81
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 82 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 141
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 142 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 188
Score = 109 bits (55), Expect = 3e-021
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 217 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 276
Query: 409 ccagaaccaga 419
|||||||||||
Sbjct: 277 ccagaaccaga 287
>gb|AU077767.1|AU077767 AU077767 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10638_2Z, mRNA sequence
Length = 712
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 549 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 490
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 489 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 430
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 429 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 383
Score = 89.7 bits (45), Expect = 3e-015
Identities = 136/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 391 gggcgactgcggcgtcatccagaaccagacggcggtctcgaacg-acacggtggggtcgg 449
||||||| ||||||||||||||||||||| || |||| ||| | | ||||||| ||| |
Sbjct: 307 gggcgacngcggcgtcatccagaaccagaacgccgtcttgaaaggagacggtggcgtccg 248
Query: 450 tggccaccaggtccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgt 509
|||||||||||||||||| || | | || |||||||||||| || || || ||||
Sbjct: 247 acgccaccaggtccgggttgctcagcaggttggagccgatggcctgccccgccgggccgt 188
Query: 510 a-gttgtagttgtaggatatctggatgggcccgcggccgtagta 552
| ||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 187 aagttgtagttgtaggagatctggatgggtccccggccgtagta 144
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagcccca 645
||||||||||||||||||||||||
Sbjct: 72 ctcctccttgaagcagtagcccca 49
>gb|CB000861.1|CB000861 S345K_B10 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 372
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 226 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 167
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 166 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 107
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 106 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 60
>gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--06-E15, mRNA sequence
Length = 507
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 306 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 247
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 246 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 187
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 186 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 140
Score = 109 bits (55), Expect = 3e-021
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 111 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 52
Query: 409 ccagaaccaga 419
|||||||||||
Sbjct: 51 ccagaaccaga 41
>gb|CF331229.1|CF331229 NACL--07-E08.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-E08, mRNA sequence
Length = 427
Score = 157 bits (79), Expect = 2e-035
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 228 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 169
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 168 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 109
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 108 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 62
>gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-N01, mRNA sequence
Length = 271
Score = 149 bits (75), Expect = 4e-033
Identities = 156/183 (85%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 193 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggcgtcat 134
Query: 409 ccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccaggtccgggtt 468
||||||||||| || |||| ||| || ||||||| ||| | |||||||||||||||||
Sbjct: 133 ccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtccgggtt 74
Query: 469 ggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttgtaggatat 528
| || | | || |||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 73 gctcagcaggttggagccgatggcctgccccgccgggccgtagttgtagttgtaggagat 14
Query: 529 ctg 531
|||
Sbjct: 13 ctg 11
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 271 gcactcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
|||||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 271 gcactccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 222
>gb|CF331228.1|CF331228 NACL--07-E08.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-E08, mRNA sequence
Length = 410
Score = 149 bits (75), Expect = 4e-033
Identities = 144/167 (86%)
Strand = Plus / Plus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| |||||||||||| ||||||||||||| || | || |||
Sbjct: 200 gttgaaaggcctctggttgtaacagtccaagttggcgccgtagctgacgcccaacatgtc 259
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| ||||||||
Sbjct: 260 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgca 319
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | ||||||||||||||||||||| || ||||||||||||||||
Sbjct: 320 ctccacgccgccgttgatgatgttggtcaccacgccgtagcccggca 366
>gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6163, mRNA sequence
Length = 535
Score = 145 bits (73), Expect = 6e-032
Identities = 143/167 (85%)
Strand = Plus / Minus
Query: 154 gttgaagggcgtctggttggcgcagtccaagttgtcgccgtagctgaccccaagcaagtc 213
|||||| ||| |||||||| ||||||||||||| ||||||||||||| || | || |||
Sbjct: 359 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 300
Query: 214 acagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgca 273
||||| || |||||||| || |||||||||||||| | |||||| ||||| |||||| |
Sbjct: 299 gcagtagcgcttgtagaacccaatccggtcggcgactctgctgtccgcgccgtggccgna 240
Query: 274 ctcgaggccgccgttgatgatgttggtgacgacgccgtagcccggca 320
||| | |||||||||||||||||||| || ||||||||||||||||
Sbjct: 239 ctccacgccgccgttgatgatgttggncaccacgccgtagcccggca 193
Score = 103 bits (52), Expect = 2e-019
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 349 gggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgcggcgtcat 408
||||||||||||||| ||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 164 gggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcggngtcat 105
Query: 409 ccagaaccaga 419
|||||||||||
Sbjct: 104 ccagaaccaga 94
Score = 103 bits (52), Expect = 2e-019
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 628 cttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcccgtcgt 687
|||||||||||||||||| | |||||| || ||||| ||||||||||||||||||| ||
Sbjct: 86 cttgaagcagtagccccacgagtaggggccatcgggngccgtcgcccacccgcccgnggt 27
Query: 688 ctcgtgggacgtctgcgccaggaacg 713
|||||| ||||||||||||| |||||
Sbjct: 26 ctcgtgcgacgtctgcgccaagaacg 1
>gb|AU077766.1|AU077766 AU077766 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10638_1A, mRNA sequence
Length = 553
Score = 143 bits (72), Expect = 2e-031
Identities = 99/108 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 535 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 476
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgctt 729
||| |||||||| |||||||||||||||||||| || | |||||||||
Sbjct: 475 cgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 428
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 401 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 342
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 341 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 293
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 223 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 164
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 163 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 104
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 103 ctgctcgccgcg 92
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
complete sequence
Length = 146303
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 96174 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 96115
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 96114 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 96055
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 96054 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 95995
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 95994 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 95935
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 87330 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 87271
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 87270 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 87211
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 87210 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 87151
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 87150 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 87091
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 87090 ccaccaggtccgggttg 87074
Score = 121 bits (61), Expect = 9e-025
Identities = 85/93 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 95749 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcgcggtcgcccacccgcc 95690
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 95689 cgtggtctcgtgggaggtctgcccgaggaacgc 95657
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 86801 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 86742
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 86741 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 86682
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 86681 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 86622
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 86621 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 86580
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 95416 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 95357
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 95356 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 95297
Query: 1049 g 1049
|
Sbjct: 95296 g 95296
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 86489 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 86430
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 86429 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 86370
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 86369 ctcggcgcg 86361
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 795 cgtaggtgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggt 854
||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||| |
Sbjct: 95576 cgtaggtgtagaaccctctggcggggcacgccgcgtcgttgcggtggagcagcagctgct 95517
Query: 855 tgaagagc 862
|||||||
Sbjct: 95516 cgaagagc 95509
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 95835 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 95776
Query: 590 tcgcagtag 598
||||||||
Sbjct: 95775 acgcagtag 95767
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 105975 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 105916
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 105915 cctgccgcactgctcggcgcg 105895
Score = 63.9 bits (32), Expect = 2e-007
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 106232 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 106173
Query: 806 aagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|| ||| |||||||||||||||||||| |||||| |||||||
Sbjct: 106172 aacccgcgggcggggcacgccgcgtcgtcgcggtggggcagcat 106129
Score = 48.1 bits (24), Expect = 0.011
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 425 gtctcgaacgacacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcg 484
|||| ||||| ||| || ||||| || |||||||| ||||||||| | || | | | |||
Sbjct: 106810 gtcttgaacgccaccgtcgggtccgttgccaccagctccgggttgcccagcaggtccgcg 106751
Query: 485 ccgatggcctggccggcgggcccgtagttgtagttg 520
||||| |||| |||||| | ||| ||||||||||||
Sbjct: 106750 ccgatcgcctcgccggccgccccatagttgtagttg 106715
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 106427 cgcccttcacctccttgtagcagtagccccacgagtagggccc 106385
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 86884 tggatggggccgcggccgtagtactt 86859
>gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012113, whole
genome shotgun sequence
Length = 69919
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 15569 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 15510
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 15509 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 15450
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 15449 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 15390
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 15389 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 15330
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 6719 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 6660
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 6659 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 6600
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 6599 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 6540
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 6539 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 6480
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 6479 ccaccaggtccgggttg 6463
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 6190 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 6131
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 6130 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 6071
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 6070 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 6011
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 6010 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 5969
Score = 105 bits (53), Expect = 5e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||| | |||||||| |||||
Sbjct: 15144 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcccggtcgcccaaccgcc 15085
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 15084 cgtggtctcgtgggaagtctgcccgaggaacgc 15052
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 14807 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 14748
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 14747 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 14688
Query: 1049 g 1049
|
Sbjct: 14687 g 14687
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 5878 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 5819
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 5818 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 5759
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 5758 ctcggcgcg 5750
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 15230 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 15171
Query: 590 tcgcagtag 598
||||||||
Sbjct: 15170 acgcagtag 15162
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 25379 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 25320
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 25319 cctgccgcactgctcggcgcg 25299
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagc 862
||||||||||||||||||||||||| ||||||| ||| | |||||||
Sbjct: 14948 cggggcacgccgcgtcgttgcggtggagcagcagctgctcgaagagc 14902
Score = 58.0 bits (29), Expect = 1e-005
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 25638 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 25579
Query: 806 aagccgttggcggggcacgccgcgtcgttgcgg 838
|| ||| |||||||||||||||||||| ||||
Sbjct: 25578 aacccgcgggcggggcacgccgcgtcgtcgcgg 25546
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 25833 cgcccttcacctccttgtagcagtagccccacgagtagggccc 25791
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 6273 tggatggggccgcggccgtagtactt 6248
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 597502 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 597443
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 597442 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 597383
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 597382 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 597323
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 597322 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 597263
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 588658 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 588599
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 588598 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 588539
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 588538 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 588479
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 588478 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 588419
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 588418 ccaccaggtccgggttg 588402
Score = 121 bits (61), Expect = 9e-025
Identities = 85/93 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 597077 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcgcggtcgcccacccgcc 597018
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 597017 cgtggtctcgtgggaggtctgcccgaggaacgc 596985
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 588129 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 588070
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 588069 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 588010
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 588009 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 587950
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 587949 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 587908
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 596744 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 596685
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 596684 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 596625
Query: 1049 g 1049
|
Sbjct: 596624 g 596624
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 587817 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 587758
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 587757 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 587698
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 587697 ctcggcgcg 587689
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 795 cgtaggtgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggt 854
||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||| |
Sbjct: 596904 cgtaggtgtagaaccctctggcggggcacgccgcgtcgttgcggtggagcagcagctgct 596845
Query: 855 tgaagagc 862
|||||||
Sbjct: 596844 cgaagagc 596837
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 597163 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 597104
Query: 590 tcgcagtag 598
||||||||
Sbjct: 597103 acgcagtag 597095
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 607303 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 607244
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 607243 cctgccgcactgctcggcgcg 607223
Score = 63.9 bits (32), Expect = 2e-007
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 607560 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 607501
Query: 806 aagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|| ||| |||||||||||||||||||| |||||| |||||||
Sbjct: 607500 aacccgcgggcggggcacgccgcgtcgtcgcggtggggcagcat 607457
Score = 48.1 bits (24), Expect = 0.011
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 425 gtctcgaacgacacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcg 484
|||| ||||| ||| || ||||| || |||||||| ||||||||| | || | | | |||
Sbjct: 608138 gtcttgaacgccaccgtcgggtccgttgccaccagctccgggttgcccagcaggtccgcg 608079
Query: 485 ccgatggcctggccggcgggcccgtagttgtagttg 520
||||| |||| |||||| | ||| ||||||||||||
Sbjct: 608078 ccgatcgcctcgccggccgccccatagttgtagttg 608043
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 607755 cgcccttcacctccttgtagcagtagccccacgagtagggccc 607713
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 588212 tggatggggccgcggccgtagtactt 588187
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 1703992 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 1703933
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 1703932 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 1703873
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 1703872 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 1703813
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 1703812 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 1703753
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 1695142 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 1695083
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 1695082 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 1695023
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 1695022 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 1694963
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 1694962 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 1694903
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 1694902 ccaccaggtccgggttg 1694886
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 1694613 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 1694554
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 1694553 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 1694494
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 1694493 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 1694434
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 1694433 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 1694392
Score = 105 bits (53), Expect = 5e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||| | |||||||| |||||
Sbjct: 1703567 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcccggtcgcccaaccgcc 1703508
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 1703507 cgtggtctcgtgggaagtctgcccgaggaacgc 1703475
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 1703230 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 1703171
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 1703170 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 1703111
Query: 1049 g 1049
|
Sbjct: 1703110 g 1703110
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 1694301 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 1694242
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 1694241 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 1694182
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 1694181 ctcggcgcg 1694173
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 1703653 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 1703594
Query: 590 tcgcagtag 598
||||||||
Sbjct: 1703593 acgcagtag 1703585
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 1713802 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 1713743
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 1713742 cctgccgcactgctcggcgcg 1713722
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagc 862
||||||||||||||||||||||||| ||||||| ||| | |||||||
Sbjct: 1703371 cggggcacgccgcgtcgttgcggtggagcagcagctgctcgaagagc 1703325
Score = 58.0 bits (29), Expect = 1e-005
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 1714061 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 1714002
Query: 806 aagccgttggcggggcacgccgcgtcgttgcgg 838
|| ||| |||||||||||||||||||| ||||
Sbjct: 1714001 aacccgcgggcggggcacgccgcgtcgtcgcgg 1713969
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 1714256 cgcccttcacctccttgtagcagtagccccacgagtagggccc 1714214
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 1694696 tggatggggccgcggccgtagtactt 1694671
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 19004305 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 19004246
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 19004245 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 19004186
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 19004185 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 19004126
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 19004125 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 19004066
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 18995455 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 18995396
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 18995395 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 18995336
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 18995335 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 18995276
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 18995275 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 18995216
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 18995215 ccaccaggtccgggttg 18995199
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 18994926 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 18994867
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 18994866 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 18994807
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 18994806 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 18994747
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 18994746 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 18994705
Score = 105 bits (53), Expect = 5e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||| | |||||||| |||||
Sbjct: 19003880 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcccggtcgcccaaccgcc 19003821
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 19003820 cgtggtctcgtgggaagtctgcccgaggaacgc 19003788
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 19003543 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 19003484
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 19003483 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 19003424
Query: 1049 g 1049
|
Sbjct: 19003423 g 19003423
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 18994614 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 18994555
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 18994554 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 18994495
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 18994494 ctcggcgcg 18994486
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 19003966 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 19003907
Query: 590 tcgcagtag 598
||||||||
Sbjct: 19003906 acgcagtag 19003898
Score = 71.9 bits (36), Expect = 7e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
||||||||||||||||| |||||||| ||||||||| ||||| || || ||||| ||||
Sbjct: 2176031 gctcctccttgaagcagaggccccaggtgtagggcccatcgggggcggtggcccagccgc 2175972
Query: 681 ccgtcgtctcgtggga 696
| || |||||||||||
Sbjct: 2175971 cggtggtctcgtggga 2175956
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 19014115 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 19014056
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 19014055 cctgccgcactgctcggcgcg 19014035
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagc 862
||||||||||||||||||||||||| ||||||| ||| | |||||||
Sbjct: 19003684 cggggcacgccgcgtcgttgcggtggagcagcagctgctcgaagagc 19003638
Score = 58.0 bits (29), Expect = 1e-005
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 19014374 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 19014315
Query: 806 aagccgttggcggggcacgccgcgtcgttgcgg 838
|| ||| |||||||||||||||||||| ||||
Sbjct: 19014314 aacccgcgggcggggcacgccgcgtcgtcgcgg 19014282
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 19014569 cgcccttcacctccttgtagcagtagccccacgagtagggccc 19014527
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 18995009 tggatggggccgcggccgtagtactt 18994984
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 143 bits (72), Expect = 2e-031
Identities = 198/240 (82%)
Strand = Plus / Minus
Query: 281 ccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcggccgtgtca 340
|||||||||||||||||||||| |||||||| ||||||| || ||||| || ||||
Sbjct: 19292099 ccgccgttgatgatgttggtgatcacgccgtaccccggcacccgcccggccgcgatgtcc 19292040
Query: 341 gccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgggcgactgc 400
||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 19292039 cccgagctcggcgtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgc 19291980
Query: 401 ggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtggccaccagg 460
||||||||||||||||| | || |||| ||||||||| ||||| | ||||||||
Sbjct: 19291979 ggcgtcatccagaaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagc 19291920
Query: 461 tccgggttggcgaggatgccggcgccgatggcctggccggcgggcccgtagttgtagttg 520
||||||||| |||| | | |||||||||||| || || ||||||||||||||||||
Sbjct: 19291919 tccgggttgttcaggaggtcctcgccgatggcctctcccgccggcccgtagttgtagttg 19291860
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 19283255 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 19283196
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 19283195 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 19283136
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 19283135 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 19283076
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 19283075 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 19283016
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 19283015 ccaccaggtccgggttg 19282999
Score = 121 bits (61), Expect = 9e-025
Identities = 85/93 (91%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 19291674 ctcctccttgaagcagtagccccacgagtaggggccgtcgggcgcggtcgcccacccgcc 19291615
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaacgc 714
||| ||||||||||| |||||| | ||||||||
Sbjct: 19291614 cgtggtctcgtgggaggtctgcccgaggaacgc 19291582
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 19282726 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 19282667
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 19282666 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 19282607
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 19282606 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 19282547
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 19282546 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 19282505
Score = 97.6 bits (49), Expect = 1e-017
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 930 gcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccacccgaactg 988
||||||||||||||| ||| ||||||||||||||||| | ||||||||| ||| |
Sbjct: 19291341 gcactggctctggcagccgtcgccgcagtagtcggaagtggagccgcaccagccgtagga 19291282
Query: 989 gctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactgctcggc 1048
||||||||| |||||||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct: 19291281 gctgcagcagaggcagttcgggcacagcgccccaccggcctgcgagccacactgctcggc 19291222
Query: 1049 g 1049
|
Sbjct: 19291221 g 19291221
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 19282414 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 19282355
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 19282354 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 19282295
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 19282294 ctcggcgcg 19282286
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 795 cgtaggtgtagaagccgttggcggggcacgccgcgtcgttgcggtgcagcagcatctggt 854
||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||| |
Sbjct: 19291501 cgtaggtgtagaaccctctggcggggcacgccgcgtcgttgcggtggagcagcagctgct 19291442
Query: 855 tgaagagc 862
|||||||
Sbjct: 19291441 cgaagagc 19291434
Score = 73.8 bits (37), Expect = 2e-010
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtacttcttccccgcggcgcacggccactgggcgctgggc 589
|||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 19291760 tggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcggcgctgggg 19291701
Query: 590 tcgcagtag 598
||||||||
Sbjct: 19291700 acgcagtag 19291692
Score = 71.9 bits (36), Expect = 7e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 621 gctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgc 680
||||||||||||||||| |||||||| ||||||||| ||||| || || ||||| ||||
Sbjct: 2157584 gctcctccttgaagcagaggccccaggtgtagggcccatcgggggcggtggcccagccgc 2157525
Query: 681 ccgtcgtctcgtggga 696
| || |||||||||||
Sbjct: 2157524 cggtggtctcgtggga 2157509
Score = 65.9 bits (33), Expect = 5e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 971 gccgcaccacccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctg 1030
|||||||||||| || ||||||||| || | |||||||||| | ||||||||||||||
Sbjct: 19301900 gccgcaccacccccacctgctgcagcagagcctgttggggcaccgggcgccgccggcctg 19301841
Query: 1031 cgacccgcactgctcggcgcg 1051
| |||||||||||||||||
Sbjct: 19301840 cctgccgcactgctcggcgcg 19301820
Score = 63.9 bits (32), Expect = 2e-007
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 746 cccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtag 805
||||||| | ||||| ||||||||||| |||||| |||| |||| | ||||| ||||
Sbjct: 19302157 cccgtggcggcgaaggccgggaacgcgccggccgcggcgacgaaggcgcggtaggcgtag 19302098
Query: 806 aagccgttggcggggcacgccgcgtcgttgcggtgcagcagcat 849
|| ||| |||||||||||||||||||| |||||| |||||||
Sbjct: 19302097 aacccgcgggcggggcacgccgcgtcgtcgcggtggggcagcat 19302054
Score = 48.1 bits (24), Expect = 0.011
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 425 gtctcgaacgacacggtggggtcggtggccaccaggtccgggttggcgaggatgccggcg 484
|||| ||||| ||| || ||||| || |||||||| ||||||||| | || | | | |||
Sbjct: 19302735 gtcttgaacgccaccgtcgggtccgttgccaccagctccgggttgcccagcaggtccgcg 19302676
Query: 485 ccgatggcctggccggcgggcccgtagttgtagttg 520
||||| |||| |||||| | ||| ||||||||||||
Sbjct: 19302675 ccgatcgcctcgccggccgccccatagttgtagttg 19302640
Score = 46.1 bits (23), Expect = 0.042
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 615 cgccctgctcctccttgaagcagtagccccaggcgtagggccc 657
|||||| | |||||||| ||||||||||||| | |||||||||
Sbjct: 19302352 cgcccttcacctccttgtagcagtagccccacgagtagggccc 19302310
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 19282809 tggatggggccgcggccgtagtactt 19282784
>gb|AU090548.1|AU090548 AU090548 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0422, mRNA sequence
Length = 565
Score = 131 bits (66), Expect = 9e-028
Identities = 84/90 (93%)
Strand = Plus / Minus
Query: 622 ctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccacccgcc 681
|||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||
Sbjct: 520 ctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccacccgcc 461
Query: 682 cgtcgtctcgtgggacgtctgcgccaggaa 711
||| |||||||| |||||||||||||||||
Sbjct: 460 cgtggtctcgtgcgacgtctgcgccaggaa 431
Score = 97.6 bits (49), Expect = 1e-017
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 756 cgaagcccgggaacgcgttggccgccgcgatgaagcccgcgtaggtgtagaagccgttgg 815
|||||| |||||| |||||||| || |||| |||| | |||||||||||||| ||||
Sbjct: 384 cgaagctcgggaaggcgttggcggcggcgacgaaggcgtcgtaggtgtagaagttcttgg 325
Query: 816 cggggcacgccgcgtcgttgcggtgcagcagcatctggttgaagagcga 864
| ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 324 ccgggcacgccgcgtcgttgcggtggagaagcatctggtcgaagagcga 276
Score = 95.6 bits (48), Expect = 5e-017
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 921 gctgccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcacca 979
||||||| ||||||||||||||| ||| |||||||||| |||| | | ||||||||
Sbjct: 206 gctgccggagcactggctctggcagccggagccgcagtaggcggaggtggatccgcacca 147
Query: 980 cccgaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgca 1039
||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 146 gccgtactggctgcagcagaggcagttggggcagagcgcgccgccggcctggctgccgca 87
Query: 1040 ctgctcggcgcg 1051
||||||| ||||
Sbjct: 86 ctgctcgccgcg 75
>gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030042000_PLATE_B01_2_010.ab1 similar to chitinase (EC
3.2.1.14) - rice, mRNA sequence
Length = 605
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 348 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 289
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 288 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 229
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 228 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 169
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 168 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 109
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 108 ccaccaggtccgggttg 92
>dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group) Cht-2 gene for endochitinase,
complete cds
Length = 2986
Score = 129 bits (65), Expect = 4e-027
Identities = 209/257 (81%)
Strand = Plus / Minus
Query: 213 cacagtatcgtttgtagaagccgatccggtcggcgacgcggctgtcagcgccatggccgc 272
||||||| || | ||||||||||||||||| || |||||| ||| | ||| || ||||
Sbjct: 2375 cacagtagcgctggtagaagccgatccggttcgccacgcggtcgtcggggccgtgcccgc 2316
Query: 273 actcgaggccgccgttgatgatgttggtgacgacgccgtagcccggcagcctgccggcgg 332
|||| || |||||||||| ||||||||||| |||||||| |||||| || || || |
Sbjct: 2315 actccagcccgccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccg 2256
Query: 333 ccgtgtcagccgcggagggcgtccactgccccgtcatgacgtcgtggcacgacggcttgg 392
| | ||| |||| ||||||| |||| ||||||| || |||||||||| ||||||||||
Sbjct: 2255 cggcgtcggccggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgt 2196
Query: 393 gcgactgcggcgtcatccagaaccagacggcggtctcgaacgacacggtggggtcggtgg 452
| ||||||||||||||||||||| | || |||| ||||||||| || | ||| || |
Sbjct: 2195 tcccctgcggcgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcg 2136
Query: 453 ccaccaggtccgggttg 469
|||||||||||||||||
Sbjct: 2135 ccaccaggtccgggttg 2119
Score = 115 bits (58), Expect = 5e-023
Identities = 181/222 (81%)
Strand = Plus / Minus
Query: 619 ctgctcctccttgaagcagtagccccaggcgtagggcccgtcgggcgccgtcgcccaccc 678
|||||||| |||||||||||||||||||| | |||| ||||||||||| |||| ||||||
Sbjct: 1845 ctgctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccaccc 1786
Query: 679 gcccgtcgtctcgtgggacgtctgcgccaggaacgccgccagctcgcgcttctgcacgtc 738
||| || ||||||||||| ||||| |||||||||| || | ||| |||||| || ||
Sbjct: 1785 gccggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttccgcgtctc 1726
Query: 739 gggcgcccccgtggtgccgaagcccgggaacgcgttggccgccgcgatgaagcccgcgta 798
|| || ||| |||||| ||||||||||| ||| || |||| |||| || ||||
Sbjct: 1725 ggtgttgccggtgccgccgaacgccgggaacgcggcggcggcggcgaggaaggcctcgta 1666
Query: 799 ggtgtagaagccgttggcggggcacgccgcgtcgttgcggtg 840
||||||||| ||| |||||||||||| |||||||||||||
Sbjct: 1665 ggtgtagaacccgcgcgcggggcacgccccgtcgttgcggtg 1624
Score = 97.6 bits (49), Expect = 1e-017
Identities = 110/129 (85%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 924 gccgctgcactggctctggcacccgctgccgcagtagtcggaag-gctgccgcaccaccc 982
||||||||||||||||||||| ||| ||||||| ||||||| | | |||||||||| ||
Sbjct: 1533 gccgctgcactggctctggcagccgtcgccgcagaagtcggaggtggtgccgcaccagcc 1474
Query: 983 gaactggctgcagcacaggcagttggggcacagcgcgccgccggcctgcgacccgcactg 1042
| |||||||||| |||||||| |||||| |||||||||||||||| ||||||||
Sbjct: 1473 ccagcggctgcagcagaggcagttcgggcacctggcgccgccggcctgcgcgccgcactg 1414
Query: 1043 ctcggcgcg 1051
|||||||||
Sbjct: 1413 ctcggcgcg 1405
Score = 44.1 bits (22), Expect = 0.17
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 530 tggatgggcccgcggccgtagtactt 555
|||||||| |||||||||||||||||
Sbjct: 1928 tggatggggccgcggccgtagtactt 1903
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,967,136
Number of Sequences: 438736
Number of extensions: 1967136
Number of successful extensions: 22627
Number of sequences better than 0.5: 179
Number of HSP's better than 0.5 without gapping: 183
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20505
Number of HSP's gapped (non-prelim): 2002
length of query: 1141
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1120
effective length of database: 2,791,206,460
effective search space: 3126151235200
effective search space used: 3126151235200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)