BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478075.2.1
(807 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK060529.1| Oryza sativa (japonica cultivar-group) cDNA... 333 9e-089
dbj|AK099192.1| Oryza sativa (japonica cultivar-group) cDNA... 333 9e-089
gb|AACV01002509.1| Oryza sativa (japonica cultivar-group) c... 333 9e-089
dbj|AP003221.2| Oryza sativa (japonica cultivar-group) geno... 333 9e-089
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 333 9e-089
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 333 9e-089
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 333 9e-089
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 333 9e-089
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 333 9e-089
ref|NM_190937.1| Oryza sativa (japonica cultivar-group), p... 331 3e-088
gb|CB684610.1|CB684610 OSJNEf14E21.r OSJNEf Oryza sativa (j... 293 7e-077
dbj|AK069244.1| Oryza sativa (japonica cultivar-group) cDNA... 293 7e-077
gb|AC112160.3| Oryza sativa (japonica cultivar-group) chrom... 293 7e-077
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 293 7e-077
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 293 7e-077
gb|U72253.1|OSU72253 Oryza sativa beta-1,3-glucanase precur... 283 7e-074
gb|AACV01012473.1| Oryza sativa (japonica cultivar-group) c... 280 1e-072
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 280 1e-072
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 280 1e-072
gb|U72254.1|OSU72254 Oryza sativa beta-1,3-glucanase precur... 262 3e-067
gb|CB647945.1|CB647945 OSJNEb11B17.r OSJNEb Oryza sativa (j... 232 2e-058
gb|AU082734.1|AU082734 AU082734 Rice root Oryza sativa (jap... 184 5e-044
gb|AU164658.1|AU164658 AU164658 Rice root Oryza sativa (jap... 141 7e-031
gb|AU164659.1|AU164659 AU164659 Rice root Oryza sativa (jap... 141 7e-031
gb|CF312474.1|CF312474 ABF--08-E02.g1 ABF3-overexpressing t... 133 2e-028
gb|CB684609.1|CB684609 OSJNEf14E21.f OSJNEf Oryza sativa (j... 96 4e-017
gb|AU075511.1|AU075511 AU075511 Rice green shoot Oryza sati... 80 2e-012
gb|U72248.1|OSU72248 Oryza sativa beta-1,3-glucanase precur... 72 5e-010
dbj|AK058891.1| Oryza sativa (japonica cultivar-group) cDNA... 72 5e-010
dbj|AP003687.3| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|AACV01003019.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
gb|AACV01003026.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
ref|NM_189718.1| Oryza sativa (japonica cultivar-group), p... 72 5e-010
ref|NM_189749.1| Oryza sativa (japonica cultivar-group), p... 72 5e-010
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 72 5e-010
dbj|AP004031.3| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
dbj|AP004073.2| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|CB663848.1|CB663848 OSJNEd09E01.r OSJNEd Oryza sativa (j... 60 2e-006
gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precur... 60 2e-006
dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
gb|AACV01012310.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NM_189709.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
gb|AQ445820.2|AQ445820 nbxb0056F21r CUGI Rice BAC Library O... 56 3e-005
gb|AU031458.1|AU031458 AU031458 Rice cDNA from immature lea... 56 3e-005
dbj|AK060802.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK063953.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK069096.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK070677.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK071109.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK072904.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK102628.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK104139.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK104321.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK104862.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK119902.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AP005051.4| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AACV01003021.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01003028.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01003030.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01003032.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01015628.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NM_189708.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NM_189716.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NM_189746.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NM_189762.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NM_189763.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|XM_463699.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|XM_463703.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|XM_477310.1| Oryza sativa (japonica cultivar-group), mRNA 56 3e-005
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 56 3e-005
dbj|AP003259.4| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AU085845.1|AU085845 AU085845 Rice panicle at flowering s... 54 1e-004
gb|AQ856476.1|AQ856476 nbeb0003A04r CUGI Rice BAC Library (... 52 5e-004
gb|AQ872290.1|AQ872290 nbeb0047F05r CUGI Rice BAC Library (... 52 5e-004
gb|CB647803.1|CB647803 OSJNEb10O08.r OSJNEb Oryza sativa (j... 52 5e-004
dbj|AK063126.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
gb|AACV01003017.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NM_189726.1| Oryza sativa (japonica cultivar-group), p... 52 5e-004
gb|D24328.1|D24328 RICR1739A Rice root Oryza sativa (japoni... 50 0.002
gb|AU172614.1|AU172614 AU172614 Rice panicle at flowering s... 50 0.002
gb|AB060278.1|AB060278 AB060278 Oryza sativa cv. Akitakomac... 50 0.002
gb|CB648284.1|CB648284 OSJNEb11J16.f OSJNEb Oryza sativa (j... 50 0.002
gb|CB657465.1|CB657465 OSJNEc12N01.r OSJNEc Oryza sativa (j... 50 0.002
gb|U72251.1|OSU72251 Oryza sativa beta-1,3-glucanase precur... 50 0.002
gb|U72249.1|OSU72249 Oryza sativa beta-1,3-glucanase precur... 50 0.002
dbj|AK070331.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK103072.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AACV01002730.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NM_189748.1| Oryza sativa (japonica cultivar-group), p... 50 0.002
ref|NM_190704.1| Oryza sativa (japonica cultivar-group), p... 50 0.002
dbj|AP003287.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP003794.4| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|CB642859.1|CB642859 OSJNEb03E03.r OSJNEb Oryza sativa (j... 48 0.007
gb|CB654564.1|CB654564 OSJNEc07D04.r OSJNEc Oryza sativa (j... 48 0.007
dbj|AK073394.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK120028.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
gb|AC098696.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|AACV01020887.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
ref|NM_194967.1| Oryza sativa (japonica cultivar-group) put... 48 0.007
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 48 0.007
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CB642155.1|CB642155 OSJNEb02D01.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB643470.1|CB643470 OSJNEb04C21.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB648053.1|CB648053 OSJNEb11E05.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB648795.1|CB648795 OSJNEb12F21.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB649668.1|CB649668 OSJNEb13L21.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB650117.1|CB650117 OSJNEb14G08.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB652434.1|CB652434 OSJNEc02F19.r OSJNEc Oryza sativa (j... 46 0.029
gb|CB653137.1|CB653137 OSJNEc03O01.r OSJNEc Oryza sativa (j... 46 0.029
gb|CB672907.1|CB672907 OSJNEe07D01.r OSJNEe Oryza sativa (j... 46 0.029
gb|CF312552.1|CF312552 ABF--08-F19.g1 ABF3-overexpressing t... 46 0.029
gb|CV732589.1|CV732589 FLO--07-C04.b1 Rice flower lambda ph... 46 0.029
gb|U72250.1|OSU72250 Oryza sativa beta-1,3-glucanase precur... 46 0.029
dbj|AP003942.1| Oryza sativa (japonica cultivar-group) chro... 46 0.029
dbj|AK070056.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 46 0.029
gb|AACV01003025.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01013654.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
ref|NM_189714.1| Oryza sativa (japonica cultivar-group), p... 46 0.029
ref|NM_189747.1| Oryza sativa (japonica cultivar-group), p... 46 0.029
dbj|AP003524.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.029
gb|D47125.1|D47125 RICS12265A Rice green shoot Oryza sativa... 44 0.12
gb|AU056269.1|AU056269 AU056269 Oryza sativa mature leaf Ni... 44 0.12
gb|AU094721.1|AU094721 AU094721 Rice panicle (longer than 1... 44 0.12
gb|U72255.1|OSU72255 Oryza sativa beta-1,3-glucanase precur... 44 0.12
dbj|AK058571.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK102185.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AP004058.3| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP004068.3| Oryza sativa (japonica cultivar-group) geno... 44 0.12
gb|AACV01005492.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01005493.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01009435.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
ref|XM_468018.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.12
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 44 0.12
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.12
ref|XM_507002.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.12
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromoso... 44 0.12
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
gb|CB636296.1|CB636296 OSJNEa01J23.r OSJNEa Oryza sativa (j... 42 0.46
gb|CB638861.1|CB638861 OSJNEa07L24.r OSJNEa Oryza sativa (j... 42 0.46
gb|CB641598.1|CB641598 OSJNEb01F05.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB641884.1|CB641884 OSJNEb01M08.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB642671.1|CB642671 OSJNEb02P12.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB642927.1|CB642927 OSJNEb03F16.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB643003.1|CB643003 OSJNEb03H13.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB643351.1|CB643351 OSJNEb04A02.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB643737.1|CB643737 OSJNEb04J15.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB643778.1|CB643778 OSJNEb04K15.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644114.1|CB644114 OSJNEb05C21.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644126.1|CB644126 OSJNEb05D03.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644214.1|CB644214 OSJNEb05F03.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644222.1|CB644222 OSJNEb05F08.f OSJNEb Oryza sativa (j... 42 0.46
gb|CB644223.1|CB644223 OSJNEb05F08.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644299.1|CB644299 OSJNEb05H02.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644416.1|CB644416 OSJNEb05J24.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644424.1|CB644424 OSJNEb05K04.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644533.1|CB644533 OSJNEb05M16.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB644941.1|CB644941 OSJNEb06F22.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB645016.1|CB645016 OSJNEb06H15.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB645346.1|CB645346 OSJNEb06P07.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB645348.1|CB645348 OSJNEb06P08.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB645612.1|CB645612 OSJNEb07G21.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB646011.1|CB646011 OSJNEb08C09.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB646123.1|CB646123 OSJNEb08F09.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB646793.1|CB646793 OSJNEb09H04.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647067.1|CB647067 OSJNEb09N07.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647489.1|CB647489 OSJNEb10H02.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647594.1|CB647594 OSJNEb10J10.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647656.1|CB647656 OSJNEb10K18.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647676.1|CB647676 OSJNEb10L06.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB647881.1|CB647881 OSJNEb11A03.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB648202.1|CB648202 OSJNEb11H19.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB648204.1|CB648204 OSJNEb11H20.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB648317.1|CB648317 OSJNEb11K08.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB648592.1|CB648592 OSJNEb12A22.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649268.1|CB649268 OSJNEb13B18.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649340.1|CB649340 OSJNEb13D11.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649565.1|CB649565 OSJNEb13J01.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649621.1|CB649621 OSJNEb13K18.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649683.1|CB649683 OSJNEb13M05.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649703.1|CB649703 OSJNEb13M16.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB649730.1|CB649730 OSJNEb13N07.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650059.1|CB650059 OSJNEb14F02.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650119.1|CB650119 OSJNEb14G09.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650584.1|CB650584 OSJNEb15B18.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650725.1|CB650725 OSJNEb15F10.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650977.1|CB650977 OSJNEb15L18.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB650988.1|CB650988 OSJNEb15M01.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651174.1|CB651174 OSJNEb16A15.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651263.1|CB651263 OSJNEb16C14.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651343.1|CB651343 OSJNEb16E06.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651592.1|CB651592 OSJNEb16J20.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651783.1|CB651783 OSJNEb16O06.r OSJNEb Oryza sativa (j... 42 0.46
gb|CB651912.1|CB651912 OSJNEc01B19.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB652009.1|CB652009 OSJNEc01F16.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652014.1|CB652014 OSJNEc01F21.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB652125.1|CB652125 OSJNEc01K18.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652306.1|CB652306 OSJNEc02B02.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652327.1|CB652327 OSJNEc02B15.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652389.1|CB652389 OSJNEc02D20.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652445.1|CB652445 OSJNEc02G15.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652513.1|CB652513 OSJNEc02J04.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB652514.1|CB652514 OSJNEc02J04.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB652650.1|CB652650 OSJNEc02N22.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB653053.1|CB653053 OSJNEc03L11.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB653293.1|CB653293 OSJNEc04C23.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB653518.1|CB653518 OSJNEc04K02.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB653684.1|CB653684 OSJNEc04P04.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654033.1|CB654033 OSJNEc05J20.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654106.1|CB654106 OSJNEc05M05.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB654107.1|CB654107 OSJNEc05M05.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654130.1|CB654130 OSJNEc05N02.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654145.1|CB654145 OSJNEc05N16.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654444.1|CB654444 OSJNEc06P04.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654458.1|CB654458 OSJNEc06P22.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654525.1|CB654525 OSJNEc07C04.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654551.1|CB654551 OSJNEc07C18.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654596.1|CB654596 OSJNEc07D24.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654642.1|CB654642 OSJNEc07F09.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654678.1|CB654678 OSJNEc07G10.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654699.1|CB654699 OSJNEc07G23.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654735.1|CB654735 OSJNEc07H23.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB654736.1|CB654736 OSJNEc07H23.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654760.1|CB654760 OSJNEc07I12.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654889.1|CB654889 OSJNEc07M03.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB654989.1|CB654989 OSJNEc07P10.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB655143.1|CB655143 OSJNEc08E07.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB655177.1|CB655177 OSJNEc08F03.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB655462.1|CB655462 OSJNEc08O19.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656128.1|CB656128 OSJNEc10C02.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656149.1|CB656149 OSJNEc10C14.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656313.1|CB656313 OSJNEc10I11.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656361.1|CB656361 OSJNEc10J24.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656497.1|CB656497 OSJNEc10O14.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656551.1|CB656551 OSJNEc11A15.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB656552.1|CB656552 OSJNEc11A15.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656557.1|CB656557 OSJNEc11A21.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656684.1|CB656684 OSJNEc11F03.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656734.1|CB656734 OSJNEc11G15.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB656737.1|CB656737 OSJNEc11G18.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB657081.1|CB657081 OSJNEc12C13.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB657083.1|CB657083 OSJNEc12C14.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB657342.1|CB657342 OSJNEc12J18.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB657343.1|CB657343 OSJNEc12J18.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB657570.1|CB657570 OSJNEc13A13.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB657628.1|CB657628 OSJNEc13C03.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB657629.1|CB657629 OSJNEc13C03.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658025.1|CB658025 OSJNEc13M09.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658033.1|CB658033 OSJNEc13M13.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658102.1|CB658102 OSJNEc13O09.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658327.1|CB658327 OSJNEc14E16.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658445.1|CB658445 OSJNEc14H20.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658540.1|CB658540 OSJNEc14K07.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658902.1|CB658902 OSJNEc15F15.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB658903.1|CB658903 OSJNEc15F15.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658910.1|CB658910 OSJNEc15F19.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB658959.1|CB658959 OSJNEc15H11.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB659026.1|CB659026 OSJNEc15J16.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB659126.1|CB659126 OSJNEc15M24.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB659282.1|CB659282 OSJNEc16B24.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB659283.1|CB659283 OSJNEc16B24.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB659362.1|CB659362 OSJNEc16E09.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB659607.1|CB659607 OSJNEc16L18.f OSJNEc Oryza sativa (j... 42 0.46
gb|CB659613.1|CB659613 OSJNEc16L22.r OSJNEc Oryza sativa (j... 42 0.46
gb|CB660147.1|CB660147 OSJNEd01K12.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB660273.1|CB660273 OSJNEd01N20.f OSJNEd Oryza sativa (j... 42 0.46
gb|CB660274.1|CB660274 OSJNEd01N20.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB660840.1|CB660840 OSJNEd02P08.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB661856.1|CB661856 OSJNEd05D21.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB661989.1|CB661989 OSJNEd05J03.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB661991.1|CB661991 OSJNEd05J04.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB662135.1|CB662135 OSJNEd05N20.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB662859.1|CB662859 OSJNEd07E03.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB662904.1|CB662904 OSJNEd07F11.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB662923.1|CB662923 OSJNEd07F21.f OSJNEd Oryza sativa (j... 42 0.46
gb|CB663356.1|CB663356 OSJNEd08D10.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB663570.1|CB663570 OSJNEd08L07.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB663947.1|CB663947 OSJNEd09G11.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB663991.1|CB663991 OSJNEd09H12.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB665385.1|CB665385 OSJNEd11L24.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB666481.1|CB666481 OSJNEd13G10.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB667019.1|CB667019 OSJNEd14C15.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB667426.1|CB667426 OSJNEd14M01.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB667643.1|CB667643 OSJNEd15B03.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668207.1|CB668207 OSJNEd15P07.f OSJNEd Oryza sativa (j... 42 0.46
gb|CB668208.1|CB668208 OSJNEd15P07.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668235.1|CB668235 OSJNEd15P24.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668239.1|CB668239 OSJNEd16A02.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668824.1|CB668824 OSJNEd16N18.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668826.1|CB668826 OSJNEd16N19.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668856.1|CB668856 OSJNEd16O12.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668879.1|CB668879 OSJNEd16P05.f OSJNEd Oryza sativa (j... 42 0.46
gb|CB668880.1|CB668880 OSJNEd16P05.r OSJNEd Oryza sativa (j... 42 0.46
gb|CB668957.1|CB668957 OSJNEe01B13.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB669094.1|CB669094 OSJNEe01F07.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB669140.1|CB669140 OSJNEe01G16.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB669382.1|CB669382 OSJNEe01N04.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB669577.1|CB669577 OSJNEe02C19.f OSJNEe Oryza sativa (j... 42 0.46
gb|CB669589.1|CB669589 OSJNEe02D02.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB670195.1|CB670195 OSJNEe03C14.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB670437.1|CB670437 OSJNEe03H24.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB670920.1|CB670920 OSJNEe04D23.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB671215.1|CB671215 OSJNEe04K22.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB671377.1|CB671377 OSJNEe04O20.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB671434.1|CB671434 OSJNEe05A10.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB672924.1|CB672924 OSJNEe07D10.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB672945.1|CB672945 OSJNEe07D22.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB673217.1|CB673217 OSJNEe07K08.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB673850.1|CB673850 OSJNEe08J13.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB673895.1|CB673895 OSJNEe08K15.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB673907.1|CB673907 OSJNEe08K22.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB674350.1|CB674350 OSJNEe09F17.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB674448.1|CB674448 OSJNEe09H24.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB674747.1|CB674747 OSJNEe09P11.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB674759.1|CB674759 OSJNEe09P18.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675178.1|CB675178 OSJNEe10L19.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675242.1|CB675242 OSJNEe10N21.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675244.1|CB675244 OSJNEe10N23.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675380.1|CB675380 OSJNEe11B17.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675510.1|CB675510 OSJNEe11E18.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675830.1|CB675830 OSJNEe11M15.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675859.1|CB675859 OSJNEe11N07.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB675984.1|CB675984 OSJNEe12A03.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB676047.1|CB676047 OSJNEe12B12.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB676593.1|CB676593 OSJNEe12O19.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB677605.1|CB677605 OSJNEe14L24.r OSJNEe Oryza sativa (j... 42 0.46
gb|CB678605.1|CB678605 OSJNEe16N24.r OSJNEe Oryza sativa (j... 42 0.46
dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
dbj|AK105303.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
dbj|AK109675.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC O... 42 0.46
gb|AC108874.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
dbj|AP005811.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005863.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|NT_107147.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107238.1| Oryza sativa (japonica cultivar-group) 42 0.46
dbj|AP005773.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AACV01003035.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01012013.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01012977.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01014141.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01019630.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01020446.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01024561.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-... 42 0.46
dbj|AP002542.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|XM_450572.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|XM_475161.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 42 0.46
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005092.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|XM_550595.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|XM_550596.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 42 0.46
dbj|AP000559.1| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 42 0.46
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase 42 0.46
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, comple... 42 0.46
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
>dbj|AK060529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H06, full
insert sequence
Length = 1288
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 765 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 824
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 825 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 884
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 885 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 944
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 945 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 1004
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 1005 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 1064
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 1065 ggtctaccacgtcgacttctcggcgtgatc 1094
>dbj|AK099192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110B18, full
insert sequence
Length = 1283
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 764 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 823
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 824 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 883
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 884 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 943
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 944 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 1003
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 1004 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 1063
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 1064 ggtctaccacgtcgacttctcggcgtgatc 1093
>gb|AACV01002509.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002509, whole
genome shotgun sequence
Length = 69030
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 52490 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 52431
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 52430 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 52371
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 52370 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 52311
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 52310 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 52251
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 52250 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 52191
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 52190 ggtctaccacgtcgacttctcggcgtgatc 52161
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0003D09
Length = 161970
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 74611 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 74552
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 74551 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 74492
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 74491 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 74432
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 74431 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 74372
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 74371 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 74312
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 74311 ggtctaccacgtcgacttctcggcgtgatc 74282
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 34023838 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 34023779
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 34023778 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 34023719
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 34023718 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 34023659
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 34023658 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 34023599
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 34023598 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 34023539
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 34023538 ggtctaccacgtcgacttctcggcgtgatc 34023509
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 41613216 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 41613157
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 41613156 cgggcgtacaac 41613145
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 41449006 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 41449065
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 41449066 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 41449113
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 41423683 tggtggtgtcggagaccgggtggccgtcggccgg 41423716
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41703386 ctggagacgtacgtgttcgccatgttcaacgagaac 41703421
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41677408 ctggagacgtacgtgttcgccatgttcaacgagaac 41677443
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41670592 ctggagacgtacgtgttcgccatgttcaacgagaac 41670557
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41665520 ctggagacgtacgtgttcgccatgttcaacgagaac 41665485
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41599289 gtggtgtcggagagcgggtggccgtcggccggcggc 41599324
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41444684 gtggtgtcggagagcgggtggccgtcggccggcggc 41444719
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41420961 gtggtgtcggagagcgggtggccgtcggccggcggc 41420996
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 41444810 gagacctacattttcgccatgttcaacgagaacgacaag 41444848
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 41423812 tggagacgtacgtgttcgccatgttcaacgagaac 41423846
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 41471276 ggagacgtacgtgttcgccatgttcaacgagaac 41471243
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 41610122 gagacgtacgtgttcgccatgttcaacgagaac 41610090
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 41421087 gagacctacattttcgccatgttcaacgagaac 41421119
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 381 ggcgccagcgtggagaacgcggcggcgtacaac 413
||||||| |||||||||||| ||||||||||||
Sbjct: 37345663 ggcgccaccgtggagaacgccgcggcgtacaac 37345695
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 41610245 gtgtcggagagcgggtggccgtcggccggcgg 41610214
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41731664 tggtggtgtcggagagcgggtggccgtcggc 41731694
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41704321 tggtggtgtcggagagcgggtggccgtcggc 41704351
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41606828 tggtggtgtcggagagcgggtggccgtcggc 41606798
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41439153 tggtggtgtcggagagcgggtggccgtcggc 41439183
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 41703266 gtgtcggagaccgggtggccgtcggc 41703291
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41742719 ttcgccatgttcaacgagaac 41742739
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41449216 ttcgccatgttcaacgagaac 41449236
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41439293 ttcgccatgttcaacgagaac 41439313
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 8471221 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 8471162
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 8471161 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 8471102
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 8471101 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 8471042
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 8471041 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 8470982
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 8470981 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 8470922
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 8470921 ggtctaccacgtcgacttctcggcgtgatc 8470892
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 381 ggcgccagcgtggagaacgcggcggcgtacaac 413
||||||| |||||||||||| ||||||||||||
Sbjct: 11793046 ggcgccaccgtggagaacgccgcggcgtacaac 11793078
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 8334999 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 8334940
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 8334939 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 8334880
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 8334879 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 8334820
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 8334819 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 8334760
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 8334759 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 8334700
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 8334699 ggtctaccacgtcgacttctcggcgtgatc 8334670
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 15803304 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 15803363
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 15803364 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 15803411
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 15730613 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 15730554
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 15730553 cgggcgtacaac 15730542
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 15854688 ctggagacgtacgtgttcgccatgttcaacgagaac 15854723
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 15844385 ctggagacgtacgtgttcgccatgttcaacgagaac 15844350
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 15833398 ctggagacgtacgtgttcgccatgttcaacgagaac 15833363
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 15798981 gtggtgtcggagagcgggtggccgtcggccggcggc 15799016
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 15767010 ctggagacgtacgtgttcgccatgttcaacgagaac 15767045
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 15716684 gtggtgtcggagagcgggtggccgtcggccggcggc 15716719
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 15799107 gagacctacattttcgccatgttcaacgagaacgacaag 15799145
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 15673254 ggagacgtacgtgttcgccatgttcaacgagaac 15673221
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 15727519 gagacgtacgtgttcgccatgttcaacgagaac 15727487
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 381 ggcgccagcgtggagaacgcggcggcgtacaac 413
||||||| |||||||||||| ||||||||||||
Sbjct: 11458181 ggcgccaccgtggagaacgccgcggcgtacaac 11458213
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 15727642 gtgtcggagagcgggtggccgtcggccggcgg 15727611
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 15793449 tggtggtgtcggagagcgggtggccgtcggc 15793479
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 15787279 tggtggtgtcggagagcgggtggccgtcggc 15787309
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 15767945 tggtggtgtcggagagcgggtggccgtcggc 15767975
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 15724223 tggtggtgtcggagagcgggtggccgtcggc 15724193
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 15766890 gtgtcggagaccgggtggccgtcggc 15766915
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 15869432 ttcgccatgttcaacgagaac 15869452
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 15803514 ttcgccatgttcaacgagaac 15803534
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 15793589 ttcgccatgttcaacgagaac 15793609
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 33536720 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 33536661
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 33536660 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 33536601
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 33536600 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 33536541
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 33536540 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 33536481
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 33536480 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 33536421
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 33536420 ggtctaccacgtcgacttctcggcgtgatc 33536391
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 41005025 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 41005084
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 41005085 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 41005132
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 40932334 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 40932275
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 40932274 cgggcgtacaac 40932263
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41056409 ctggagacgtacgtgttcgccatgttcaacgagaac 41056444
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41046106 ctggagacgtacgtgttcgccatgttcaacgagaac 41046071
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41035119 ctggagacgtacgtgttcgccatgttcaacgagaac 41035084
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41000702 gtggtgtcggagagcgggtggccgtcggccggcggc 41000737
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 40968731 ctggagacgtacgtgttcgccatgttcaacgagaac 40968766
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 40918405 gtggtgtcggagagcgggtggccgtcggccggcggc 40918440
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 41000828 gagacctacattttcgccatgttcaacgagaacgacaag 41000866
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 40874975 ggagacgtacgtgttcgccatgttcaacgagaac 40874942
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 40929240 gagacgtacgtgttcgccatgttcaacgagaac 40929208
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 381 ggcgccagcgtggagaacgcggcggcgtacaac 413
||||||| |||||||||||| ||||||||||||
Sbjct: 36659902 ggcgccaccgtggagaacgccgcggcgtacaac 36659934
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 40929363 gtgtcggagagcgggtggccgtcggccggcgg 40929332
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 40995170 tggtggtgtcggagagcgggtggccgtcggc 40995200
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 40989000 tggtggtgtcggagagcgggtggccgtcggc 40989030
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 40969666 tggtggtgtcggagagcgggtggccgtcggc 40969696
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 40925944 tggtggtgtcggagagcgggtggccgtcggc 40925914
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 40968611 gtgtcggagaccgggtggccgtcggc 40968636
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41071153 ttcgccatgttcaacgagaac 41071173
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41005235 ttcgccatgttcaacgagaac 41005255
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 40995310 ttcgccatgttcaacgagaac 40995330
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 333 bits (168), Expect = 9e-089
Identities = 290/330 (87%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 33943168 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 33943109
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 33943108 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 33943049
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 33943048 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 33942989
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 33942988 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 33942929
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 33942928 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 33942869
Query: 560 ggtctaccacgtcgacttcacggcgggatc 589
||||||||||||||||||| ||||| ||||
Sbjct: 33942868 ggtctaccacgtcgacttctcggcgtgatc 33942839
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 41532546 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 41532487
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 41532486 cgggcgtacaac 41532475
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 41368336 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 41368395
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 41368396 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 41368443
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 41343013 tggtggtgtcggagaccgggtggccgtcggccgg 41343046
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41622716 ctggagacgtacgtgttcgccatgttcaacgagaac 41622751
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41596738 ctggagacgtacgtgttcgccatgttcaacgagaac 41596773
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41589922 ctggagacgtacgtgttcgccatgttcaacgagaac 41589887
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 41584850 ctggagacgtacgtgttcgccatgttcaacgagaac 41584815
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41518619 gtggtgtcggagagcgggtggccgtcggccggcggc 41518654
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41364014 gtggtgtcggagagcgggtggccgtcggccggcggc 41364049
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 41340291 gtggtgtcggagagcgggtggccgtcggccggcggc 41340326
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 41364140 gagacctacattttcgccatgttcaacgagaacgacaag 41364178
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 41343142 tggagacgtacgtgttcgccatgttcaacgagaac 41343176
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 41390606 ggagacgtacgtgttcgccatgttcaacgagaac 41390573
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 41529452 gagacgtacgtgttcgccatgttcaacgagaac 41529420
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 41340417 gagacctacattttcgccatgttcaacgagaac 41340449
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 381 ggcgccagcgtggagaacgcggcggcgtacaac 413
||||||| |||||||||||| ||||||||||||
Sbjct: 37264993 ggcgccaccgtggagaacgccgcggcgtacaac 37265025
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 41529575 gtgtcggagagcgggtggccgtcggccggcgg 41529544
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41650994 tggtggtgtcggagagcgggtggccgtcggc 41651024
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41623651 tggtggtgtcggagagcgggtggccgtcggc 41623681
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41526158 tggtggtgtcggagagcgggtggccgtcggc 41526128
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 41358483 tggtggtgtcggagagcgggtggccgtcggc 41358513
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 41622596 gtgtcggagaccgggtggccgtcggc 41622621
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41662049 ttcgccatgttcaacgagaac 41662069
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41368546 ttcgccatgttcaacgagaac 41368566
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 41358623 ttcgccatgttcaacgagaac 41358643
>ref|NM_190937.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1014
Score = 331 bits (167), Expect = 3e-088
Identities = 286/325 (88%), Gaps = 3/325 (0%)
Strand = Plus / Plus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 687 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 746
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 747 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 806
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 807 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 866
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 867 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 926
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| ||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 927 gaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgc 986
Query: 560 ggtctaccacgtcgacttcacggcg 584
||||||||||||||||||| |||||
Sbjct: 987 ggtctaccacgtcgacttctcggcg 1011
>gb|CB684610.1|CB684610 OSJNEf14E21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14E21 3', mRNA sequence
Length = 789
Score = 293 bits (148), Expect = 7e-077
Identities = 288/332 (86%), Gaps = 12/332 (3%)
Strand = Plus / Minus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 528 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggcgacg 469
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 468 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 409
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 408 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 349
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 348 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 289
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 288 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 229
Query: 552 atgagcgaggtctaccacgtcgacttcacggc 583
|||| ||| |||||||| ||||||||| ||||
Sbjct: 228 atgaccgaagtctaccatgtcgacttcgcggc 197
>dbj|AK069244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011M23, full
insert sequence
Length = 1356
Score = 293 bits (148), Expect = 7e-077
Identities = 288/332 (86%), Gaps = 12/332 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 849 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggcgacg 908
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 909 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 968
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 969 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 1028
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 1029 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 1088
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1089 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 1148
Query: 552 atgagcgaggtctaccacgtcgacttcacggc 583
|||| ||| |||||||| ||||||||| ||||
Sbjct: 1149 atgaccgaagtctaccatgtcgacttcgcggc 1180
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
complete sequence
Length = 121466
Score = 293 bits (148), Expect = 7e-077
Identities = 288/332 (86%), Gaps = 12/332 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 115202 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggcgacg 115261
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 115262 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 115321
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 115322 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 115381
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 115382 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 115441
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 115442 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 115501
Query: 552 atgagcgaggtctaccacgtcgacttcacggc 583
|||| ||| |||||||| ||||||||| ||||
Sbjct: 115502 atgaccgaagtctaccatgtcgacttcgcggc 115533
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 293 bits (148), Expect = 7e-077
Identities = 288/332 (86%), Gaps = 12/332 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 618916 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggcgacg 618975
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 618976 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 619035
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 619036 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 619095
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 619096 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 619155
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 619156 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 619215
Query: 552 atgagcgaggtctaccacgtcgacttcacggc 583
|||| ||| |||||||| ||||||||| ||||
Sbjct: 619216 atgaccgaagtctaccatgtcgacttcgcggc 619247
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 293 bits (148), Expect = 7e-077
Identities = 288/332 (86%), Gaps = 12/332 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 24228964 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggcgacg 24229023
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 24229024 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 24229083
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 24229084 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 24229143
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 24229144 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 24229203
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 24229204 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 24229263
Query: 552 atgagcgaggtctaccacgtcgacttcacggc 583
|||| ||| |||||||| ||||||||| ||||
Sbjct: 24229264 atgaccgaagtctaccatgtcgacttcgcggc 24229295
Score = 42.1 bits (21), Expect = 0.46
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | ||| |||||||||||||||||
Sbjct: 17962556 gagacctacgtcttctccatgttcaacgagaac 17962524
>gb|U72253.1|OSU72253 Oryza sativa beta-1,3-glucanase precursor (Gns7) gene, complete cds
Length = 2813
Score = 283 bits (143), Expect = 7e-074
Identities = 280/325 (86%), Gaps = 3/325 (0%)
Strand = Plus / Plus
Query: 263 gtacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccgg 322
|||||| |||||||||||||| ||| |||||||| | |||||||| |||||||||| ||
Sbjct: 2486 gtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcggg 2545
Query: 323 ggtgcaggggctggagctggtggtgtcggagaccggctggccgtcggccggcggcgagg- 381
| |||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 2546 cgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggc 2605
Query: 382 --gcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgacgg 439
|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |
Sbjct: 2606 cggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcg 2665
Query: 440 cggcacccctcggcggcccgggaaggccctggagacctacctgttcgccatgttcaacga 499
|||||| || |||||||||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 2666 cggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacga 2725
Query: 500 gaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggacatgagcga 559
|||| ||| || ||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 2726 gaaccagaagccccgaggcgtggagagaaacttcggcctgttccacccggacatgagcgc 2785
Query: 560 ggtctaccacgtcgacttcacggcg 584
||||||||||||||||||| |||||
Sbjct: 2786 ggtctaccacgtcgacttctcggcg 2810
>gb|AACV01012473.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012473, whole
genome shotgun sequence
Length = 17198
Score = 280 bits (141), Expect = 1e-072
Identities = 288/333 (86%), Gaps = 13/333 (3%)
Strand = Plus / Minus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcgg-cggtggagaaggc--c 320
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 6717 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggccggtggagaaggcgac 6658
Query: 321 ggg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcgg 376
||| | ||||| | |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 6657 gggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcgg 6598
Query: 377 cgagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcga 436
|| |||||||| ||||||||||||||||||||||||||||||| || | || ||||||
Sbjct: 6597 cgtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctc 6538
Query: 437 cggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccat 490
||||||| || || |||||||| |||||| | ||||||| ||||||||||||||
Sbjct: 6537 cggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccat 6478
Query: 491 gttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccgga 550
||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 6477 gttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccga 6418
Query: 551 catgagcgaggtctaccacgtcgacttcacggc 583
||||| ||| |||||||| ||||||||| ||||
Sbjct: 6417 catgaccgaagtctaccatgtcgacttcgcggc 6385
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 280 bits (141), Expect = 1e-072
Identities = 288/333 (86%), Gaps = 13/333 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcgg-cggtggagaaggc--c 320
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 6620643 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggccggtggagaaggcgac 6620702
Query: 321 ggg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcgg 376
||| | ||||| | |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 6620703 gggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcgg 6620762
Query: 377 cgagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcga 436
|| |||||||| ||||||||||||||||||||||||||||||| || | || ||||||
Sbjct: 6620763 cgtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctc 6620822
Query: 437 cggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccat 490
||||||| || || |||||||| |||||| | ||||||| ||||||||||||||
Sbjct: 6620823 cggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccat 6620882
Query: 491 gttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccgga 550
||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 6620883 gttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccga 6620942
Query: 551 catgagcgaggtctaccacgtcgacttcacggc 583
||||| ||| |||||||| ||||||||| ||||
Sbjct: 6620943 catgaccgaagtctaccatgtcgacttcgcggc 6620975
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 4184152 tggtggtgtcggagaccgggtggccgtcggccgg 4184185
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 4181431 gtggtgtcggagagcgggtggccgtcggccggcggc 4181466
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 4184281 tggagacgtacgtgttcgccatgttcaacgagaac 4184315
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 4181557 gagacctacattttcgccatgttcaacgagaac 4181589
Score = 42.1 bits (21), Expect = 0.46
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | ||| |||||||||||||||||
Sbjct: 372994 gagacctacgtcttctccatgttcaacgagaac 372962
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 280 bits (141), Expect = 1e-072
Identities = 288/333 (86%), Gaps = 13/333 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcgg-cggtggagaaggc--c 320
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 23920956 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggccggtggagaaggcgac 23921015
Query: 321 ggg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcgg 376
||| | ||||| | |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 23921016 gggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcgg 23921075
Query: 377 cgagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcga 436
|| |||||||| ||||||||||||||||||||||||||||||| || | || ||||||
Sbjct: 23921076 cgtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctc 23921135
Query: 437 cggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccat 490
||||||| || || |||||||| |||||| | ||||||| ||||||||||||||
Sbjct: 23921136 cggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccat 23921195
Query: 491 gttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccgga 550
||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 23921196 gttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccga 23921255
Query: 551 catgagcgaggtctaccacgtcgacttcacggc 583
||||| ||| |||||||| ||||||||| ||||
Sbjct: 23921256 catgaccgaagtctaccatgtcgacttcgcggc 23921288
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 21484465 tggtggtgtcggagaccgggtggccgtcggccgg 21484498
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 21481744 gtggtgtcggagagcgggtggccgtcggccggcggc 21481779
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 21484594 tggagacgtacgtgttcgccatgttcaacgagaac 21484628
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 21481870 gagacctacattttcgccatgttcaacgagaac 21481902
Score = 42.1 bits (21), Expect = 0.46
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | ||| |||||||||||||||||
Sbjct: 17673307 gagacctacgtcttctccatgttcaacgagaac 17673275
>gb|U72254.1|OSU72254 Oryza sativa beta-1,3-glucanase precursor (Gns8) gene, partial cds
Length = 2612
Score = 262 bits (132), Expect = 3e-067
Identities = 278/324 (85%), Gaps = 12/324 (3%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc--cg 321
||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 2289 tacaccaacatgttcgacgcgatcgtggacgcgggctacgcggcggtggagaaggcgacg 2348
Query: 322 gg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcggc 377
|| | ||||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 2349 ggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcggc 2408
Query: 378 gagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgtcgac 437
| |||||||| ||||||||||||||||||||||||||||||| || | || |||||| |
Sbjct: 2409 gtgggcgccaccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtctcc 2468
Query: 438 ggcggc------acccctcggcggcccgggaaggccctggagacctacctgttcgccatg 491
|||||| || || |||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 2469 ggcggcgccgggacgccgcggcggccggggaagccggtggagacgtacctgttcgccatg 2528
Query: 492 ttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccggac 551
|||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 2529 ttcaacgagaaccagaagcccgagggcgtggagcagcatttcggcctcttccagcccgac 2588
Query: 552 atgagcgaggtctaccacgtcgac 575
|||| ||| |||||||| ||||||
Sbjct: 2589 atgaccgaagtctaccatgtcgac 2612
>gb|CB647945.1|CB647945 OSJNEb11B17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11B17 3', mRNA sequence
Length = 582
Score = 232 bits (117), Expect = 2e-058
Identities = 282/333 (84%), Gaps = 13/333 (3%)
Strand = Plus / Minus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcgg-cggtggagaag--gcc 320
||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 495 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggccggtggagaaggcgcc 436
Query: 321 ggg-gtgcaggggctggagctggtggtgtcggagaccggctggccgtc---ggccggcgg 376
||| | ||||| | |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 435 gggcgggcaggcggtggagctggtggtgtcggagaccggctggccgtccggtggcggcgg 376
Query: 377 cgagggcgccagcgtggagaacgcggcggcgtacaacaacaacgtggtgcggcacgt--- 433
|| ||||||| ||||||||||||||||||||||||||||||| || | || |||||
Sbjct: 375 cgtgggcgcccccgtggagaacgcggcggcgtacaacaacaacctgatccgccacgtttc 316
Query: 434 ---cgacggcggcacccctcggcggcccgggaaggccctggagacctacctgttcgccat 490
|| || ||| || || ||||| || |||||| | ||||||| ||||||||||||||
Sbjct: 315 cggcggcgccgggacgccgcggcgcccggggaagccggtggagacgtacctgttcgccat 256
Query: 491 gttcaacgagaacggcaaggccgagggcgtggagcagcacttcggcctcttccagccgga 550
||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 255 gttcaacgagaaccagaagcccgagggcgtggagcagcatttcggccttttccagcccga 196
Query: 551 catgagcgaggtctaccacgtcgacttcacggc 583
||||| ||| |||| ||| || |||||| ||||
Sbjct: 195 catgaccgaagtctcccatgtggacttcgcggc 163
>gb|AU082734.1|AU082734 AU082734 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R4073, mRNA sequence
Length = 461
Score = 184 bits (93), Expect = 5e-044
Identities = 206/244 (84%), Gaps = 9/244 (3%)
Strand = Plus / Plus
Query: 349 cggagaccggctggccgtcggc---cggcggcgagggcgccagcgtggagaacgcggcgg 405
||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||
Sbjct: 1 cggagaccggctggccgtccggtggcggcggcgtgggcgccaccgtggagaacgcggcgg 60
Query: 406 cgtacaacaacaacgtggtgcggcacgtcgacggcggcacc------cctcggcggcccg 459
|||||||||||||| || | || |||||| ||||||| || || |||| || |
Sbjct: 61 cgtacaacaacaacctgatccgccacgtctccggcggcgccgggacgccgcggcnnccgg 120
Query: 460 ggaaggccctggagacctacctgttcgccatgttcaacgagaacggcaaggccgagggcg 519
||||| | ||||||| ||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 121 ggaagccggtggagacgtacctgttcgccatgttcaacgagaaccagaagcccgagggcg 180
Query: 520 tggagcagcacttcggcctcttccagccggacatgagcgaggtctaccacgtcgacttca 579
|||||||||| ||||||||||||||||| ||||||| ||| |||||||| |||||||||
Sbjct: 181 tggagcagcatttcggcctcttccagcccgacatgaccgaagtctaccatgtcgacttcg 240
Query: 580 cggc 583
||||
Sbjct: 241 cggc 244
>gb|AU164658.1|AU164658 AU164658 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0989, mRNA sequence
Length = 342
Score = 141 bits (71), Expect = 7e-031
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 450 cggcggcccgggaaggccctggagacctacctgttcgccatgttcaacgagaacggcaag 509
|||||||| |||||| | ||||||| ||||||||||||||||||||||||||| |||
Sbjct: 43 cggcggccggggaagccggtggagacgtacctgttcgccatgttcaacgagaaccagaag 102
Query: 510 gccgagggcgtggagcagcacttcggcctcttccagccggacatgagcgaggtctaccac 569
||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 103 cccgagggcgtggagcagcatttcggcctcttccagcccgacatgaccgaagtctaccat 162
Query: 570 gtcgacttcacggc 583
| ||||||| ||||
Sbjct: 163 gncgacttcgcggc 176
>gb|AU164659.1|AU164659 AU164659 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0990, mRNA sequence
Length = 294
Score = 141 bits (71), Expect = 7e-031
Identities = 104/115 (90%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaacggcaaggccgagggcgtggagcagc 528
||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 14 tggagacgtacctgttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagc 73
Query: 529 acttcggcctcttccagccggacatgagcgaggtctaccacgtcgacttcacggc 583
| ||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||
Sbjct: 74 atttcggcctcttccagcccgacatgaccgaagtctaccatgtcgacttcgcggc 128
>gb|CF312474.1|CF312474 ABF--08-E02.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--08-E02, mRNA sequence
Length = 288
Score = 133 bits (67), Expect = 2e-028
Identities = 97/107 (90%)
Strand = Plus / Plus
Query: 477 tacctgttcgccatgttcaacgagaacggcaaggccgagggcgtggagcagcacttcggc 536
||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 2 tacctgttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagcatttcggc 61
Query: 537 ctcttccagccggacatgagcgaggtctaccacgtcgacttcacggc 583
||||||||||| ||||||| ||| |||||||| ||||||||| ||||
Sbjct: 62 ctcttccagcccgacatgaccgaagtctaccatgtcgacttcgcggc 108
>gb|CB684609.1|CB684609 OSJNEf14E21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14E21 5', mRNA sequence
Length = 691
Score = 95.6 bits (48), Expect = 4e-017
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 264 tacactaacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggc 319
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 603 tacaccaacatgttcgacgcgatcgtggacgcggcgcacgcggcggtggagaaggc 658
>gb|AU075511.1|AU075511 AU075511 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14937_8Z, mRNA sequence
Length = 313
Score = 79.8 bits (40), Expect = 2e-012
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 513 gagggcgtggagcagcacttcggcctcttccagccggacatgagcgaggtctaccacgtc 572
||||||||||||||||| |||||||| |||||||| ||||||| ||| |||||||| |||
Sbjct: 10 gagggcgtggagcagca-ttcggcctnttccagcccgacatgaccgaagtctaccatgtc 68
Query: 573 gacttcacggc 583
|||||| ||||
Sbjct: 69 gacttcgcggc 79
>gb|U72248.1|OSU72248 Oryza sativa beta-1,3-glucanase precursor (Gns2) gene, complete cds
Length = 2230
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 1991 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 2050
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 2051 cgggcgtacaac 2062
>dbj|AK058891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D11, full
insert sequence
Length = 1060
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 631 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 690
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 691 cgggcgtacaac 702
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0660F12
Length = 147203
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 100745 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 100686
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 100685 cgggcgtacaac 100674
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 86818 gtggtgtcggagagcgggtggccgtcggccggcggc 86853
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 97651 gagacgtacgtgttcgccatgttcaacgagaac 97619
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 97774 gtgtcggagagcgggtggccgtcggccggcgg 97743
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 94357 tggtggtgtcggagagcgggtggccgtcggc 94327
>gb|AACV01003019.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003019, whole
genome shotgun sequence
Length = 40934
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 20113 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 20172
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 20173 cgggcgtacaac 20184
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 34042 gtggtgtcggagagcgggtggccgtcggccggcggc 34007
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 23207 gagacgtacgtgttcgccatgttcaacgagaac 23239
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 23084 gtgtcggagagcgggtggccgtcggccggcgg 23115
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 26503 tggtggtgtcggagagcgggtggccgtcggc 26533
>gb|AACV01003026.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003026, whole
genome shotgun sequence
Length = 17433
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 5725 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 5666
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 5665 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 5618
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 10048 gtggtgtcggagagcgggtggccgtcggccggcggc 10013
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 9922 gagacctacattttcgccatgttcaacgagaacgacaag 9884
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 15580 tggtggtgtcggagagcgggtggccgtcggc 15550
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 15440 ttcgccatgttcaacgagaac 15420
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 5515 ttcgccatgttcaacgagaac 5495
>ref|NM_189718.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 996
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 676 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 735
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 736 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 783
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 886 ttcgccatgttcaacgagaac 906
>ref|NM_189749.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1032
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 706 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 765
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 766 cgggcgtacaac 777
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 1241510 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 1241451
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 1241450 cgggcgtacaac 1241439
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 1077300 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 1077359
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 1077360 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 1077407
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 1051977 tggtggtgtcggagaccgggtggccgtcggccgg 1052010
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 1331680 ctggagacgtacgtgttcgccatgttcaacgagaac 1331715
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 1305702 ctggagacgtacgtgttcgccatgttcaacgagaac 1305737
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 1298886 ctggagacgtacgtgttcgccatgttcaacgagaac 1298851
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 1293814 ctggagacgtacgtgttcgccatgttcaacgagaac 1293779
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 1227583 gtggtgtcggagagcgggtggccgtcggccggcggc 1227618
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 1072978 gtggtgtcggagagcgggtggccgtcggccggcggc 1073013
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 1049255 gtggtgtcggagagcgggtggccgtcggccggcggc 1049290
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 1073104 gagacctacattttcgccatgttcaacgagaacgacaag 1073142
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 1052106 tggagacgtacgtgttcgccatgttcaacgagaac 1052140
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 1099570 ggagacgtacgtgttcgccatgttcaacgagaac 1099537
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 1238416 gagacgtacgtgttcgccatgttcaacgagaac 1238384
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 1049381 gagacctacattttcgccatgttcaacgagaac 1049413
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 1238539 gtgtcggagagcgggtggccgtcggccggcgg 1238508
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 1359958 tggtggtgtcggagagcgggtggccgtcggc 1359988
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 1332615 tggtggtgtcggagagcgggtggccgtcggc 1332645
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 1235122 tggtggtgtcggagagcgggtggccgtcggc 1235092
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 1067447 tggtggtgtcggagagcgggtggccgtcggc 1067477
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 1331560 gtgtcggagaccgggtggccgtcggc 1331585
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 1371013 ttcgccatgttcaacgagaac 1371033
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 1077510 ttcgccatgttcaacgagaac 1077530
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 1067587 ttcgccatgttcaacgagaac 1067607
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0432C03
Length = 164394
Score = 71.9 bits (36), Expect = 5e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 270 aacatgttcgacgcgatcgtggacgcgacgcacgcggcggtggagaaggccggggtgcag 329
|||||||||| |||||| |||||||| | | || ||||| ||||||||||||||| || |
Sbjct: 59829 aacatgttcgccgcgatggtggacgccatgtactcggcgttggagaaggccggggcgccg 59888
Query: 330 gggctggagctggtggtgtcggagaccggctggccgtcggccggcggc 377
||| ||| | || ||||| |||| ||| ||||||||||||||||||
Sbjct: 59889 ggggtggccgtcgtcgtgtccgagagcgggtggccgtcggccggcggc 59936
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 34506 tggtggtgtcggagaccgggtggccgtcggccgg 34539
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 55507 gtggtgtcggagagcgggtggccgtcggccggcggc 55542
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 31784 gtggtgtcggagagcgggtggccgtcggccggcggc 31819
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 55633 gagacctacattttcgccatgttcaacgagaacgacaag 55671
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 34635 tggagacgtacgtgttcgccatgttcaacgagaac 34669
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 470 ggagacctacctgttcgccatgttcaacgagaac 503
|||||| ||| |||||||||||||||||||||||
Sbjct: 82099 ggagacgtacgtgttcgccatgttcaacgagaac 82066
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 31910 gagacctacattttcgccatgttcaacgagaac 31942
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 49976 tggtggtgtcggagagcgggtggccgtcggc 50006
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 60039 ttcgccatgttcaacgagaac 60059
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 483 ttcgccatgttcaacgagaac 503
|||||||||||||||||||||
Sbjct: 50116 ttcgccatgttcaacgagaac 50136
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0614D08
Length = 147548
Score = 71.9 bits (36), Expect = 5e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggcgagggcgccagcgtggagaacgcg 401
||||||||||||| ||| |||||||||| |||||| |||| |||| |||||||||||||
Sbjct: 88839 gtggtgtcggagagcgggtggccgtcggacggcgggaagggggccaccgtggagaacgcg 88780
Query: 402 gcggcgtacaac 413
||||||||||
Sbjct: 88779 cgggcgtacaac 88768
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 146215 ctggagacgtacgtgttcgccatgttcaacgagaac 146180
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 141143 ctggagacgtacgtgttcgccatgttcaacgagaac 141108
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 74912 gtggtgtcggagagcgggtggccgtcggccggcggc 74947
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||| ||| |||||||||||||||||||||||
Sbjct: 85745 gagacgtacgtgttcgccatgttcaacgagaac 85713
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 345 gtgtcggagaccggctggccgtcggccggcgg 376
|||||||||| ||| |||||||||||||||||
Sbjct: 85868 gtgtcggagagcgggtggccgtcggccggcgg 85837
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 82451 tggtggtgtcggagagcgggtggccgtcggc 82421
>gb|CB663848.1|CB663848 OSJNEd09E01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09E01 3', mRNA sequence
Length = 671
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 388 tggtggtgtcggagaccgggtggccgtcggccgg 355
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 259 tggagacgtacgtgttcgccatgttcaacgagaac 225
>gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precursor (Gns6) gene, complete cds
Length = 2169
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 1922 tggtggtgtcggagaccgggtggccgtcggccgg 1955
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 2051 tggagacgtacgtgttcgccatgttcaacgagaac 2085
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full
insert sequence
Length = 1245
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 781 tggtggtgtcggagaccgggtggccgtcggccgg 814
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 910 tggagacgtacgtgttcgccatgttcaacgagaac 944
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full
insert sequence
Length = 1240
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 776 tggtggtgtcggagaccgggtggccgtcggccgg 809
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 905 tggagacgtacgtgttcgccatgttcaacgagaac 939
>gb|AACV01012310.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012310, whole
genome shotgun sequence
Length = 59916
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 15486 tggtggtgtcggagaccgggtggccgtcggccgg 15519
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 12765 gtggtgtcggagagcgggtggccgtcggccggcggc 12800
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 15615 tggagacgtacgtgttcgccatgttcaacgagaac 15649
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 12891 gagacctacattttcgccatgttcaacgagaac 12923
>ref|NM_189709.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 999
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggccgg 373
||||||||||||||||||| ||||||||||||||
Sbjct: 752 tggtggtgtcggagaccgggtggccgtcggccgg 785
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 469 tggagacctacctgttcgccatgttcaacgagaac 503
||||||| ||| |||||||||||||||||||||||
Sbjct: 881 tggagacgtacgtgttcgccatgttcaacgagaac 915
>gb|AQ445820.2|AQ445820 nbxb0056F21r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0056F21r, DNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 431 gtggtgtcggagagcgggtggccgtcggccggcggc 396
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 471 gagacctacctgttcgccatgttcaacgagaacggcaag 509
||||||||| | |||||||||||||||||||||| ||||
Sbjct: 305 gagacctacattttcgccatgttcaacgagaacgacaag 267
>gb|AU031458.1|AU031458 AU031458 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61603_2Z, mRNA sequence
Length = 373
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 91 ctggagacgtacgtgttcgccatgttcaacgagaac 126
>dbj|AK060802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F06, full
insert sequence
Length = 1103
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 679 gtggtgtcggagagcgggtggccgtcggccggcggc 714
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 805 gagacctacattttcgccatgttcaacgagaac 837
>dbj|AK063953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F10, full
insert sequence
Length = 2157
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 933 ctggagacgtacgtgttcgccatgttcaacgagaac 968
Score = 46.1 bits (23), Expect = 0.029
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 340 tggtggtgtcggagaccggctggccgtcggc 370
||||||||||||||| ||| |||||||||||
Sbjct: 1753 tggtggtgtcggagagcgggtggccgtcggc 1783
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 345 gtgtcggagaccggctggccgtcggc 370
|||||||||||||| |||||||||||
Sbjct: 813 gtgtcggagaccgggtggccgtcggc 838
>dbj|AK069096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E16, full
insert sequence
Length = 1172
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 899 ctggagacgtacgtgttcgccatgttcaacgagaac 934
>dbj|AK070677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063O17, full
insert sequence
Length = 1295
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 342 gtggtgtcggagaccggctggccgtcggccggcggc 377
||||||||||||| ||| ||||||||||||||||||
Sbjct: 854 gtggtgtcggagagcgggtggccgtcggccggcggc 889
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 471 gagacctacctgttcgccatgttcaacgagaac 503
||||||||| | |||||||||||||||||||||
Sbjct: 980 gagacctacattttcgccatgttcaacgagaac 1012
>dbj|AK071109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D09, full
insert sequence
Length = 1142
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 468 ctggagacctacctgttcgccatgttcaacgagaac 503
|||||||| ||| |||||||||||||||||||||||
Sbjct: 937 ctggagacgtacgtgttcgccatgttcaacgagaac 972
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,471,461
Number of Sequences: 438736
Number of extensions: 1471461
Number of successful extensions: 23094
Number of sequences better than 0.5: 385
Number of HSP's better than 0.5 without gapping: 402
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20426
Number of HSP's gapped (non-prelim): 2634
length of query: 807
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 786
effective length of database: 2,791,206,460
effective search space: 2193888277560
effective search space used: 2193888277560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)