BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440773.2.1
(1437 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK059316.1| Oryza sativa (japonica cultivar-group) cDNA... 743 0.0
dbj|AK069502.1| Oryza sativa (japonica cultivar-group) cDNA... 735 0.0
dbj|AK104170.1| Oryza sativa (japonica cultivar-group) cDNA... 735 0.0
dbj|AK104287.1| Oryza sativa (japonica cultivar-group) cDNA... 735 0.0
gb|AU069162.1|AU069162 AU069162 Rice callus Oryza sativa (j... 192 4e-046
emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC O... 125 7e-026
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 125 7e-026
gb|AACV01025155.1| Oryza sativa (japonica cultivar-group) c... 125 7e-026
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 125 7e-026
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 125 7e-026
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 125 7e-026
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 125 7e-026
gb|AQ858103.1|AQ858103 nbeb0011N18f CUGI Rice BAC Library (... 84 2e-013
emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Parti... 78 1e-011
ref|NT_107149.1| Oryza sativa (japonica cultivar-group) 78 1e-011
gb|AACV01024824.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
gb|CH401279.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|CA755537.1|CA755537 BR030023000_PLATE_B07_50_059.ab1 OA ... 58 1e-005
dbj|AK059950.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
dbj|AK073680.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AC134231.2| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AACV01006596.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AC105260.2| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|AC098598.2| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|AACV01012804.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 56 5e-005
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|CB650541.1|CB650541 OSJNEb15A18.f OSJNEb Oryza sativa (j... 52 9e-004
dbj|AP003939.1| Oryza sativa (japonica cultivar-group) chro... 52 9e-004
dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA... 52 9e-004
dbj|AP005194.2| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
dbj|AP003755.5| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
ref|NT_079876.2| Oryza sativa (japonica cultivar-group) 52 9e-004
ref|NT_107115.1| Oryza sativa (japonica cultivar-group) 52 9e-004
dbj|AP004992.3| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 ... 52 9e-004
gb|AACV01005250.1| Oryza sativa (japonica cultivar-group) c... 52 9e-004
gb|AACV01007680.1| Oryza sativa (japonica cultivar-group) c... 52 9e-004
gb|AACV01013943.1| Oryza sativa (japonica cultivar-group) c... 52 9e-004
gb|AACV01015530.1| Oryza sativa (japonica cultivar-group) c... 52 9e-004
gb|AACV01015632.1| Oryza sativa (japonica cultivar-group) c... 52 9e-004
ref|XM_477213.1| Oryza sativa (japonica cultivar-group), mRNA 52 9e-004
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 52 9e-004
dbj|AP004176.2| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 52 9e-004
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 52 9e-004
gb|AC145324.3| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 52 9e-004
ref|NT_107121.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|AACV01018049.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AC146938.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP003812.1| Oryza sativa (japonica cultivar-group) chro... 48 0.013
emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC O... 48 0.013
gb|AC108871.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC O... 48 0.013
gb|AC098572.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP005066.2| Oryza sativa (japonica cultivar-group) geno... 48 0.013
dbj|AP005841.3| Oryza sativa (japonica cultivar-group) geno... 48 0.013
dbj|AP003738.3| Oryza sativa (japonica cultivar-group) geno... 48 0.013
dbj|AP006266.3| Oryza sativa (japonica cultivar-group) geno... 48 0.013
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 48 0.013
ref|NT_107131.1| Oryza sativa (japonica cultivar-group) 48 0.013
gb|AACV01004439.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01011670.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01015560.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01022850.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01023447.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
gb|AACV01024455.1| Oryza sativa (japonica cultivar-group) c... 48 0.013
ref|XM_465904.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.013
ref|XM_477254.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.013
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 48 0.013
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 48 0.013
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 48 0.013
gb|AC139171.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.013
gb|AU090500.1|AU090500 AU090500 Rice cDNA from immature lea... 46 0.053
gb|AU161768.1|AU161768 AU161768 Rice shoot Oryza sativa (ja... 46 0.053
gb|AU222681.1|AU222681 AU222681 Rice green shoot Oryza sati... 46 0.053
gb|CA756388.1|CA756388 BR030041000_PLATE_D08_60_073.ab1 OA ... 46 0.053
gb|CB652222.1|CB652222 OSJNEc01O02.f OSJNEc Oryza sativa (j... 46 0.053
gb|CB653085.1|CB653085 OSJNEc03M13.f OSJNEc Oryza sativa (j... 46 0.053
gb|CB655698.1|CB655698 OSJNEc09F17.f OSJNEc Oryza sativa (j... 46 0.053
gb|CB658007.1|CB658007 OSJNEc13L21.f OSJNEc Oryza sativa (j... 46 0.053
gb|CB660138.1|CB660138 OSJNEd01K08.f OSJNEd Oryza sativa (j... 46 0.053
gb|CB661210.1|CB661210 OSJNEd03M15.f OSJNEd Oryza sativa (j... 46 0.053
gb|CB662907.1|CB662907 OSJNEd07F13.f OSJNEd Oryza sativa (j... 46 0.053
gb|CB666299.1|CB666299 OSJNEd13C10.f OSJNEd Oryza sativa (j... 46 0.053
gb|CB666333.1|CB666333 OSJNEd13D04.f OSJNEd Oryza sativa (j... 46 0.053
gb|CB670319.1|CB670319 OSJNEe03F10.f OSJNEe Oryza sativa (j... 46 0.053
gb|CB670372.1|CB670372 OSJNEe03G14.f OSJNEe Oryza sativa (j... 46 0.053
gb|CB673022.1|CB673022 OSJNEe07F15.f OSJNEe Oryza sativa (j... 46 0.053
gb|CB674006.1|CB674006 OSJNEe08N10.f OSJNEe Oryza sativa (j... 46 0.053
gb|CB675534.1|CB675534 OSJNEe11F10.f OSJNEe Oryza sativa (j... 46 0.053
gb|CB679510.1|CB679510 OSJNEf03B18.f OSJNEf Oryza sativa (j... 46 0.053
gb|CB679511.1|CB679511 OSJNEf03B18.r OSJNEf Oryza sativa (j... 46 0.053
gb|CB682982.1|CB682982 OSJNEf10N06.f OSJNEf Oryza sativa (j... 46 0.053
gb|CX728014.1|CX728014 OSJNEc13L21.r OSJNEc Oryza sativa (j... 46 0.053
dbj|AB080264.1| Oryza sativa (japonica cultivar-group) OsRa... 46 0.053
dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.053
dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.053
dbj|AK102157.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.053
dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.053
dbj|AK108753.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.053
dbj|AP003872.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP004636.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC O... 46 0.053
emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC O... 46 0.053
gb|AC087545.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromoso... 46 0.053
gb|AC134925.4| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC O... 46 0.053
gb|AC108755.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC O... 46 0.053
dbj|AP006756.2| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP005735.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107129.1| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107147.1| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 46 0.053
dbj|AP002845.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP003634.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
gb|AACV01000025.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01009637.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01010229.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01014884.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01014902.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01018435.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01020383.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01021613.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01023310.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01023840.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01024582.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
gb|AACV01024981.1| Oryza sativa (japonica cultivar-group) c... 46 0.053
ref|NM_193305.1| Oryza sativa (japonica cultivar-group), p... 46 0.053
ref|NM_196634.1| Oryza sativa (japonica cultivar-group) put... 46 0.053
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.053
ref|XM_472330.1| Oryza sativa (japonica cultivar-group), p... 46 0.053
ref|XM_473403.1| Oryza sativa (japonica cultivar-group), p... 46 0.053
ref|XM_474091.1| Oryza sativa (japonica cultivar-group), p... 46 0.053
ref|XM_482300.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.053
ref|NT_079859.2| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NM_183504.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.053
dbj|AP004329.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 46 0.053
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 46 0.053
dbj|AB080263.1| Oryza sativa (japonica cultivar-group) OsRa... 46 0.053
dbj|AP004233.3| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP004361.4| Oryza sativa (japonica cultivar-group) geno... 46 0.053
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 46 0.053
emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromoso... 46 0.053
emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC... 46 0.053
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 46 0.053
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.053
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.053
gb|AQ861196.1|AQ861196 nbeb0016L19r CUGI Rice BAC Library (... 44 0.21
gb|D41447.1|D41447 RICS3957A Rice shoot Oryza sativa (japon... 44 0.21
gb|AU076238.1|AU076238 AU076238 Rice cDNA from young root O... 44 0.21
gb|AU173460.1|AU173460 AU173460 Rice root Oryza sativa (jap... 44 0.21
gb|AU182233.1|AU182233 AU182233 Rice panicle at flowering s... 44 0.21
gb|AU182517.1|AU182517 AU182517 Rice panicle at flowering s... 44 0.21
gb|AU223026.1|AU223026 AU223026 Rice shoot Oryza sativa (ja... 44 0.21
gb|CA755405.1|CA755405 BR030019000_PLATE_H12_96_103.ab1 OA ... 44 0.21
gb|CB647567.1|CB647567 OSJNEb10I20.f OSJNEb Oryza sativa (j... 44 0.21
gb|CB647982.1|CB647982 OSJNEb11C14.f OSJNEb Oryza sativa (j... 44 0.21
gb|CB652204.1|CB652204 OSJNEc01N14.f OSJNEc Oryza sativa (j... 44 0.21
gb|CB652691.1|CB652691 OSJNEc02P10.f OSJNEc Oryza sativa (j... 44 0.21
gb|CB657019.1|CB657019 OSJNEc12A10.f OSJNEc Oryza sativa (j... 44 0.21
gb|CB657020.1|CB657020 OSJNEc12A10.r OSJNEc Oryza sativa (j... 44 0.21
gb|CB662655.1|CB662655 OSJNEd06O05.f OSJNEd Oryza sativa (j... 44 0.21
gb|CB662656.1|CB662656 OSJNEd06O05.r OSJNEd Oryza sativa (j... 44 0.21
gb|CB665928.1|CB665928 OSJNEd12J18.f OSJNEd Oryza sativa (j... 44 0.21
gb|CB665929.1|CB665929 OSJNEd12J18.r OSJNEd Oryza sativa (j... 44 0.21
gb|CB668582.1|CB668582 OSJNEd16I02.f OSJNEd Oryza sativa (j... 44 0.21
gb|CB668583.1|CB668583 OSJNEd16I02.r OSJNEd Oryza sativa (j... 44 0.21
gb|CB676471.1|CB676471 OSJNEe12M01.f OSJNEe Oryza sativa (j... 44 0.21
gb|CF277467.1|CF277467 14ETL--03-A09.b1 Rice etiolated leaf... 44 0.21
gb|CF277989.1|CF277989 14ETL--03-L15.g1 Rice etiolated leaf... 44 0.21
gb|CF290934.1|CF290934 14ROOT--01-C17.g1 Rice root plasmid ... 44 0.21
gb|D24994.1|D24994 RICR2913A Rice root Oryza sativa (japoni... 44 0.21
gb|D24926.1|D24926 RICR2795A Rice root Oryza sativa (japoni... 44 0.21
dbj|AP000615.1| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP003519.1| Oryza sativa (japonica cultivar-group) chro... 44 0.21
dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chro... 44 0.21
dbj|AP004164.1| Oryza sativa (japonica cultivar-group) chro... 44 0.21
dbj|AP004659.2| Oryza sativa (japonica cultivar-group) chro... 44 0.21
gb|AC130608.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
dbj|AP004384.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AK058205.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK059829.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK060044.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK063278.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK065785.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK066830.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK068007.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK068460.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK068564.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK069852.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK071124.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK073112.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK073412.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK099898.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK100696.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK101273.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK103733.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK103804.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK105327.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK105767.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AP005388.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AK119256.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK121977.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
dbj|AK122165.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.21
emb|AL731877.4|CNS08C8H Oryza sativa chromosome 12, . BAC O... 44 0.21
emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC O... 44 0.21
emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC O... 44 0.21
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 44 0.21
gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.21
gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D2... 44 0.21
gb|AC099739.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC105928.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 ... 44 0.21
gb|AC144426.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
dbj|AP003925.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005294.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005647.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC O... 44 0.21
dbj|AP004136.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
gb|AC104847.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC132003.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC137113.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC104709.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
dbj|AP005804.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005838.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP004178.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP004255.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005198.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC O... 44 0.21
dbj|AP004562.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
gb|AC144735.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107098.1| Oryza sativa (japonica cultivar-group) chr... 44 0.21
ref|NT_107125.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107130.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 44 0.21
gb|AC137694.5| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
dbj|AP005322.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP004687.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP003458.4| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP003513.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
gb|AC108223.5| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|AC130598.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
dbj|AP005967.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP003198.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005688.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
gb|AACV01001119.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01003306.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01003728.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01003729.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01004331.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01005689.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01005799.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01006092.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01007899.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01009144.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01009922.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01010527.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01010807.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01012689.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01013292.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01013343.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01013864.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01014056.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01015312.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01016785.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01017149.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01018430.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01018739.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01019827.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01020506.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01022010.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01023013.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01023225.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01023337.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01023492.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01023838.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01024343.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01024843.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01025065.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01025466.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
gb|AACV01025519.1| Oryza sativa (japonica cultivar-group) c... 44 0.21
ref|NM_193849.1| Oryza sativa (japonica cultivar-group), p... 44 0.21
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.21
ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_464084.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_464250.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_465714.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_469698.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_471550.1| Oryza sativa (japonica cultivar-group), p... 44 0.21
ref|XM_472769.1| Oryza sativa (japonica cultivar-group), p... 44 0.21
ref|XM_473997.1| Oryza sativa (japonica cultivar-group), p... 44 0.21
ref|XM_479152.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_479798.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_482284.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_483007.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|XM_483008.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.21
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_079947.2| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107195.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|XM_506714.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.21
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 44 0.21
dbj|AP002816.1| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP005679.2| Oryza sativa (japonica cultivar-group) geno... 44 0.21
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 44 0.21
dbj|AP004213.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
dbj|AP003753.3| Oryza sativa (japonica cultivar-group) geno... 44 0.21
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 44 0.21
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 44 0.21
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.21
emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromoso... 44 0.21
emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromoso... 44 0.21
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 44 0.21
>dbj|AK059316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H03, full
insert sequence
Length = 1334
Score = 743 bits (375), Expect = 0.0
Identities = 669/767 (87%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtgcgagcattaccggcggaggtgcaagatcgtggca 211
||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 174 gacgtgggcaagatggagcacgggtgcgagcattacaggaggagatgcaagatcgtggcg 233
Query: 212 ccgtgctgcaaccaggtgttcccctgccgccactgccacaacgaggctacggcttccgga 271
|| |||||| | |||||||| | |||||||| ||||||||||| || |||||||| ||
Sbjct: 234 ccctgctgcggcgaggtgttcgcttgccgccattgccacaacgatgccacggcttcaggt 293
Query: 272 gataggcatacaatatgtcgtcaggatgttgaaaaagtagtttgcctactctgtgaaaca 331
||| ||||||| || || || |||||||||||||||||||| || ||||||||||| ||
Sbjct: 294 gatcggcataccatttgccgccaggatgttgaaaaagtagtatgtctactctgtgatact 353
Query: 332 aaacagccggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgt 391
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 354 gaacagccggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgt 413
Query: 392 gatatatgcaaattttatgatgatgatacagacaaagggcagtaccattgcatcgattgt 451
||| ||||||| |||||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 414 gatgtatgcaagttttatgatgatgatacagagaaagggcagtttcattgctacgattgt 473
Query: 452 ggcatatgcagggttggtggcaaggaaaacttcttccactgtgtgaagtgtgggtcctgc 511
||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| ||
Sbjct: 474 ggcatatgcagggttggtggcaaggaaaactacttccactgcgcaaagtgcgggtcttgt 533
Query: 512 tattctgttatactccgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 571
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tatgctgttgctctgcgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 593
Query: 572 ccaatctgttatgagtatctatttgactcattacaaggaacaagagttctgaactgtgga 631
||||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||
Sbjct: 594 ccaatttgttatgagtatctatttgattcattaaaaggaacacgagttctcgactgtgga 653
Query: 632 cacacaatgcacttgacatgttttgaagaaatggtggcgcataacaaatacacttgtcca 691
||||| |||||| || ||| ||| || ||||||| |||||||||||||||||||||
Sbjct: 654 cacacgatgcacatggaatgcttttctgagatggtggaacataacaaatacacttgtcca 713
Query: 692 atatgctctaaaacagctcttgatttgacacatcattgggaaatgttggatcaagagatc 751
|||||||| || |||||||||||| |||||||||| |||| | |||| |||||||||||
Sbjct: 714 atatgctccaagacagctcttgatatgacacatcactgggcattgttagatcaagagatt 773
Query: 752 gaagccacgatcatgcctcttgtgtatcgctacaagatttgggtgctttgcaacgattgc 811
||||| || |||||||||| || || || |||||| |||||||||| || || || |||
Sbjct: 774 gaagcaacaatcatgcctcccgtctaccgttacaaggtttgggtgctctgtaatgactgc 833
Query: 812 aacaaggtctcagaggtgaactttcacgtgattggccacaagtgcagccactgcagatcg 871
|||||||||||||| ||| |||| || |||||||||||||||||||||||||||| |||
Sbjct: 834 aacaaggtctcagaagtggacttccatgtgattggccacaagtgcagccactgcaactcg 893
Query: 872 tacaacacccgaacaacatcgcgccctgcagatttatccggaagcag 918
||||| || ||| | ||||| || ||||| |||||||| ||||||||
Sbjct: 894 tacaatactcgatcgacatcacggcctgcggatttatcaggaagcag 940
>dbj|AK069502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020D18, full
insert sequence
Length = 1306
Score = 735 bits (371), Expect = 0.0
Identities = 668/767 (87%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtgcgagcattaccggcggaggtgcaagatcgtggca 211
||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 196 gacgtgggcaagatggagcacgggtgcgagcattacaggaggagatgcaagatcgtggcg 255
Query: 212 ccgtgctgcaaccaggtgttcccctgccgccactgccacaacgaggctacggcttccgga 271
|| |||||| | |||||||| | |||||||| ||||||||||| || |||||||| ||
Sbjct: 256 ccctgctgcggcgaggtgttcgcttgccgccattgccacaacgatgccacggcttcaggt 315
Query: 272 gataggcatacaatatgtcgtcaggatgttgaaaaagtagtttgcctactctgtgaaaca 331
||| ||||||| || || || |||||||||||||||||||| || ||||||||||| ||
Sbjct: 316 gatcggcataccatttgccgccaggatgttgaaaaagtagtatgtctactctgtgatact 375
Query: 332 aaacagccggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgt 391
||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||
Sbjct: 376 gaacagccggtgtcacaagtgtgcataaactgtggtggcaatatgggagagtacttttgt 435
Query: 392 gatatatgcaaattttatgatgatgatacagacaaagggcagtaccattgcatcgattgt 451
||| ||||||| |||||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 436 gatgtatgcaagttttatgatgatgatacagagaaagggcagtttcattgctacgattgt 495
Query: 452 ggcatatgcagggttggtggcaaggaaaacttcttccactgtgtgaagtgtgggtcctgc 511
||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| ||
Sbjct: 496 ggcatatgcagggttggtggcaaggaaaactacttccactgcgcaaagtgcgggtcttgt 555
Query: 512 tattctgttatactccgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 571
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatgctgttgctctgcgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 615
Query: 572 ccaatctgttatgagtatctatttgactcattacaaggaacaagagttctgaactgtgga 631
||||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||
Sbjct: 616 ccaatttgttatgagtatctatttgattcattaaaaggaacacgagttctcgactgtgga 675
Query: 632 cacacaatgcacttgacatgttttgaagaaatggtggcgcataacaaatacacttgtcca 691
||||| |||||| || ||| ||| || ||||||| |||||||||||||||||||||
Sbjct: 676 cacacgatgcacatggaatgcttttctgagatggtggaacataacaaatacacttgtcca 735
Query: 692 atatgctctaaaacagctcttgatttgacacatcattgggaaatgttggatcaagagatc 751
|||||||| || |||||||||||| |||||||||| |||| | |||| |||||||||||
Sbjct: 736 atatgctccaagacagctcttgatatgacacatcactgggcattgttagatcaagagatt 795
Query: 752 gaagccacgatcatgcctcttgtgtatcgctacaagatttgggtgctttgcaacgattgc 811
||||| || |||||||||| || || || |||||| |||||||||| || || || |||
Sbjct: 796 gaagcaacaatcatgcctcccgtctaccgttacaaggtttgggtgctctgtaatgactgc 855
Query: 812 aacaaggtctcagaggtgaactttcacgtgattggccacaagtgcagccactgcagatcg 871
|||||||||||||| ||| |||| || |||||||||||||||||||||||||||| |||
Sbjct: 856 aacaaggtctcagaagtggacttccatgtgattggccacaagtgcagccactgcaactcg 915
Query: 872 tacaacacccgaacaacatcgcgccctgcagatttatccggaagcag 918
||||| || ||| | ||||| || ||||| |||||||| ||||||||
Sbjct: 916 tacaatactcgatcgacatcacggcctgcggatttatcaggaagcag 962
>dbj|AK104170.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F09, full
insert sequence
Length = 1203
Score = 735 bits (371), Expect = 0.0
Identities = 668/767 (87%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtgcgagcattaccggcggaggtgcaagatcgtggca 211
||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||
Sbjct: 177 gacgtgggcaagatggagcacgggtgcgagcattacaggaggagatgcaagatcgtggcg 236
Query: 212 ccgtgctgcaaccaggtgttcccctgccgccactgccacaacgaggctacggcttccgga 271
|| |||||| | |||||||| | |||||||| ||||||||||| || |||||||| ||
Sbjct: 237 ccctgctgcggcgaggtgttcgcttgccgccattgccacaacgatgccacggcttcaggt 296
Query: 272 gataggcatacaatatgtcgtcaggatgttgaaaaagtagtttgcctactctgtgaaaca 331
||| ||||||| || || || |||||||||||||||||||| || ||||||||||| ||
Sbjct: 297 gatcggcataccatttgccgccaggatgttgaaaaagtagtatgtctactctgtgatact 356
Query: 332 aaacagccggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgt 391
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 357 gaacagccggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgt 416
Query: 392 gatatatgcaaattttatgatgatgatacagacaaagggcagtaccattgcatcgattgt 451
||| ||||||| |||||||||||||||||||| |||||||||| |||||| |||||||
Sbjct: 417 gatgtatgcaagttttatgatgatgatacagagaaagggcagtttcattgctacgattgt 476
Query: 452 ggcatatgcagggttggtggcaaggaaaacttcttccactgtgtgaagtgtgggtcctgc 511
||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| ||
Sbjct: 477 ggcatatgcagggttggtggcaaggaaaactacttccactgcgcaaagtgcgggtcttgt 536
Query: 512 tattctgttatactccgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 571
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tatgctgttgctctgcgtgataaccatcagtgtgtggagaactcaatgaggcagaattgc 596
Query: 572 ccaatctgttatgagtatctatttgactcattacaaggaacaagagttctgaactgtgga 631
||||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||
Sbjct: 597 ccaatttgttatgagtatctatttgattcattaaaaggaacacgagttctcgactgtgga 656
Query: 632 cacacaatgcacttgacatgttttgaagaaatggtggcgcataacaaatacacttgtcca 691
||||| |||||| || ||| || || ||||||| |||||||||||||||||||||
Sbjct: 657 cacacgatgcacatggaatgcctttctgagatggtggaacataacaaatacacttgtcca 716
Query: 692 atatgctctaaaacagctcttgatttgacacatcattgggaaatgttggatcaagagatc 751
|||||||| || |||||||||||| |||||||||| |||| | |||| |||||||||||
Sbjct: 717 atatgctccaagacagctcttgatatgacacatcactgggcattgttagatcaagagatt 776
Query: 752 gaagccacgatcatgcctcttgtgtatcgctacaagatttgggtgctttgcaacgattgc 811
||||| || |||||||||| || || || |||||| |||||||||| || || || |||
Sbjct: 777 gaagcaacaatcatgcctcccgtctaccgttacaaggtttgggtgctctgtaatgactgc 836
Query: 812 aacaaggtctcagaggtgaactttcacgtgattggccacaagtgcagccactgcagatcg 871
|||||||||||||| ||| |||| || |||||||||||||||||||||||||||| |||
Sbjct: 837 aacaaggtctcagaagtggacttccatgtgattggccacaagtgcagccactgcaactcg 896
Query: 872 tacaacacccgaacaacatcgcgccctgcagatttatccggaagcag 918
||||| || ||| | ||||| || ||||| |||||||| ||||||||
Sbjct: 897 tacaatactcgatcgacatcacggcctgcggatttatcaggaagcag 943
>dbj|AK104287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D07, full
insert sequence
Length = 1252
Score = 735 bits (371), Expect = 0.0
Identities = 665/763 (87%)
Strand = Plus / Plus
Query: 156 tgggcaagatgaagcacgggtgcgagcattaccggcggaggtgcaagatcgtggcaccgt 215
||||||||||| |||||||||||||||||||| || |||| |||||||||||||| || |
Sbjct: 178 tgggcaagatggagcacgggtgcgagcattacaggaggagatgcaagatcgtggcgccct 237
Query: 216 gctgcaaccaggtgttcccctgccgccactgccacaacgaggctacggcttccggagata 275
||||| | |||||||| | |||||||| ||||||||||| || |||||||| || |||
Sbjct: 238 gctgcggcgaggtgttcgcttgccgccattgccacaacgatgccacggcttcaggtgatc 297
Query: 276 ggcatacaatatgtcgtcaggatgttgaaaaagtagtttgcctactctgtgaaacaaaac 335
||||||| || || || |||||||||||||||||||| || ||||||||||| || |||
Sbjct: 298 ggcataccatttgccgccaggatgttgaaaaagtagtatgtctactctgtgatactgaac 357
Query: 336 agccggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgata 395
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 358 agccggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatg 417
Query: 396 tatgcaaattttatgatgatgatacagacaaagggcagtaccattgcatcgattgtggca 455
||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||
Sbjct: 418 tatgcaagttttatgatgatgatacagagaaagggcagtttcattgctacgattgtggca 477
Query: 456 tatgcagggttggtggcaaggaaaacttcttccactgtgtgaagtgtgggtcctgctatt 515
||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||
Sbjct: 478 tatgcagggttggtggcaaggaaaactacttccactgcgcaaagtgcgggtcttgttatg 537
Query: 516 ctgttatactccgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaa 575
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctgttgctctgcgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaa 597
Query: 576 tctgttatgagtatctatttgactcattacaaggaacaagagttctgaactgtggacaca 635
| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||||
Sbjct: 598 tttgttatgagtatctatttgattcattaaaaggaacacgagttctcgactgtggacaca 657
Query: 636 caatgcacttgacatgttttgaagaaatggtggcgcataacaaatacacttgtccaatat 695
| |||||| || ||| ||| || ||||||| |||||||||||||||||||||||||
Sbjct: 658 cgatgcacatggaatgcttttctgagatggtggaacataacaaatacacttgtccaatat 717
Query: 696 gctctaaaacagctcttgatttgacacatcattgggaaatgttggatcaagagatcgaag 755
|||| || |||||||||||| |||||||||| |||| | |||| ||||||||||| ||||
Sbjct: 718 gctccaagacagctcttgatatgacacatcactgggcattgttagatcaagagattgaag 777
Query: 756 ccacgatcatgcctcttgtgtatcgctacaagatttgggtgctttgcaacgattgcaaca 815
| || |||||||||| || || || |||||| |||||||||| || || || |||||||
Sbjct: 778 caacaatcatgcctcccgtctaccgttacaaggtttgggtgctctgtaatgactgcaaca 837
Query: 816 aggtctcagaggtgaactttcacgtgattggccacaagtgcagccactgcagatcgtaca 875
|||||||||| ||| |||| || |||||||||||||||||||||||||||| |||||||
Sbjct: 838 aggtctcagaagtggacttccatgtgattggccacaagtgcagccactgcaactcgtaca 897
Query: 876 acacccgaacaacatcgcgccctgcagatttatccggaagcag 918
| || ||| | ||||| || ||||| |||||||| ||||||||
Sbjct: 898 atactcgatcgacatcacggcctgcggatttatcaggaagcag 940
>gb|AU069162.1|AU069162 AU069162 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52569_1A, mRNA sequence
Length = 405
Score = 192 bits (97), Expect = 4e-046
Identities = 206/241 (85%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtgcgagcattaccggcggaggtgcaagatcgtggca 211
||||||||||||||| ||||||||||| ||||||| || |||| ||||||||||||||
Sbjct: 156 gacgtgggcaagatggagcacgggtgcnggcattacaggaggagatgcaagatcgtggcg 215
Query: 212 ccgtgctgcaaccaggtgttcccctgccgccactgccacaacgaggctacggcttccgga 271
|| |||||| | |||||||| | |||||||| ||||||||||| || |||||||| ||
Sbjct: 216 ccctgctgcggcgaggtgttcgcttgccgccattgccacaacgatgccacggcttcaggt 275
Query: 272 gataggcatacaatatgtcgtcaggatgttgaaaaagtagtttgcctactctgtgaaaca 331
||| ||||||| || || || |||||||||||||||||||| || ||||||||||| ||
Sbjct: 276 gatcggcataccatttgccgccaggatgttgaaaaagtagtatgtctactctgtgatact 335
Query: 332 aaacagccggtgtcacaag-tgtgcataagctg-tggagtcaatatgggagagtactttt 389
|||| ||||||||||||| ||| ||||| ||| ||| ||||||||||| ||||||||||
Sbjct: 336 gaacanccggtgtcacaagttgtncataaactgttggtgtcaatatgggngagtactttt 395
Query: 390 g 390
|
Sbjct: 396 g 396
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 158019
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 154410 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 154351
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 154350 caagttttatgatgatgat 154332
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Minus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 152745 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 152686
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 152685 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 152626
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 152625 caggaagcag 152616
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 153764 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 153705
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 153421 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 153362
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 153361 agatcaagag 153352
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 155343 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 155284
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 155283 cttgccgccattgccacaacga 155262
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 153630 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 153572
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 154127 cagggttggtggcaaggaaaactacttccactg 154095
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 154242 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 154198
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 155615 gacgtgggcaagatggagcacgggtg 155590
>ref|NT_107150.1| Oryza sativa (japonica cultivar-group)
Length = 2060995
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 3610 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 3669
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 3670 caagttttatgatgatgat 3688
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 5275 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 5334
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 5335 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 5394
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 5395 caggaagcag 5404
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4256 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 4315
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 4599 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 4658
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 4659 agatcaagag 4668
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 2677 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 2736
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 2737 cttgccgccattgccacaacga 2758
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 4390 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 4448
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 3893 cagggttggtggcaaggaaaactacttccactg 3925
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 3778 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 3822
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 2405 gacgtgggcaagatggagcacgggtg 2430
>gb|AACV01025155.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025155, whole
genome shotgun sequence
Length = 75518
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 17692 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 17751
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 17752 caagttttatgatgatgat 17770
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 19357 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 19416
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 19417 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 19476
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 19477 caggaagcag 19486
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18338 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 18397
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 18681 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 18740
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 18741 agatcaagag 18750
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 16759 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 16818
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 16819 cttgccgccattgccacaacga 16840
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 18472 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 18530
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 17975 cagggttggtggcaaggaaaactacttccactg 18007
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 17860 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 17904
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 16487 gacgtgggcaagatggagcacgggtg 16512
>gb|CH401281.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000118 genomic
scaffold, whole genome shotgun sequence
Length = 3660441
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 2186473 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 2186532
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 2186533 caagttttatgatgatgat 2186551
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 2188138 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 2188197
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 2188198 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 2188257
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 2188258 caggaagcag 2188267
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2187119 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 2187178
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 2187462 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 2187521
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 2187522 agatcaagag 2187531
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 2185540 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 2185599
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 2185600 cttgccgccattgccacaacga 2185621
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 2187253 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 2187311
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 2186756 cagggttggtggcaaggaaaactacttccactg 2186788
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 2186641 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 2186685
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 51523 ctccgccgtcgccgccgccgccg 51501
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 2185268 gacgtgggcaagatggagcacgggtg 2185293
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1409 tatatctatacctaataataaa 1430
||||||||||||||||||||||
Sbjct: 1363843 tatatctatacctaataataaa 1363864
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 17709578 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 17709637
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 17709638 caagttttatgatgatgat 17709656
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 17711243 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 17711302
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 17711303 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 17711362
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 17711363 caggaagcag 17711372
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 17710224 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 17710283
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 17710567 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 17710626
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 17710627 agatcaagag 17710636
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 13877870 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 13877929
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 13877930 caaattttatgacgatgat 13877948
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 17708645 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 17708704
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 17708705 cttgccgccattgccacaacga 17708726
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 17710358 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 17710416
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 17709861 cagggttggtggcaaggaaaactacttccactg 17709893
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 17709746 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 17709790
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgc 68
||||||||||||||| ||||||||||||
Sbjct: 8864190 ccctcctctccgccgccgccgccgccgc 8864163
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 15574628 ctccgccgtcgccgccgccgccg 15574606
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 10646996 ctccgccgtcgccgccgccgccg 10646974
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 57 cgccgccgccgccggggatgggg 79
|||||||||||||||||||||||
Sbjct: 344591 cgccgccgccgccggggatgggg 344613
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 22228395 cctctccgccgccgccgccgccgccg 22228420
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 21484773 cctctccgccgccgccgccgccgccg 21484798
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 17708373 gacgtgggcaagatggagcacgggtg 17708398
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1409 tatatctatacctaataataaa 1430
||||||||||||||||||||||
Sbjct: 16886948 tatatctatacctaataataaa 16886969
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ccgccgtcgccgccgccgccgg 71
||||||||||||||||||||||
Sbjct: 14056785 ccgccgtcgccgccgccgccgg 14056764
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1408 ttatatctatacctaataataa 1429
||||||||||||||||||||||
Sbjct: 7505610 ttatatctatacctaataataa 7505589
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gccgccgccgccggggatgggg 79
||||||||||||||||||||||
Sbjct: 296549 gccgccgccgccggggatgggg 296570
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 21491479 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 21491538
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 21491539 caagttttatgatgatgat 21491557
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 21493144 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 21493203
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 21493204 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 21493263
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 21493264 caggaagcag 21493273
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21492125 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 21492184
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 21492468 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 21492527
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 21492528 agatcaagag 21492537
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 16726724 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 16726783
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 16726784 caaattttatgacgatgat 16726802
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 21490546 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 21490605
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 21490606 cttgccgccattgccacaacga 21490627
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 21492259 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 21492317
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 21491762 cagggttggtggcaaggaaaactacttccactg 21491794
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 21491647 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 21491691
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgc 68
||||||||||||||| ||||||||||||
Sbjct: 11156050 ccctcctctccgccgccgccgccgccgc 11156023
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 18917039 ctccgccgtcgccgccgccgccg 18917017
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 13222737 ctccgccgtcgccgccgccgccg 13222715
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 26023664 cctctccgccgccgccgccgccgccg 26023689
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 25305141 cctctccgccgccgccgccgccgccg 25305166
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 21490274 gacgtgggcaagatggagcacgggtg 21490299
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1409 tatatctatacctaataataaa 1430
||||||||||||||||||||||
Sbjct: 20442326 tatatctatacctaataataaa 20442347
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ccgccgtcgccgccgccgccgg 71
||||||||||||||||||||||
Sbjct: 17051935 ccgccgtcgccgccgccgccgg 17051914
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1408 ttatatctatacctaataataa 1429
||||||||||||||||||||||
Sbjct: 8348898 ttatatctatacctaataataa 8348877
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gccgccgccgccggggatgggg 79
||||||||||||||||||||||
Sbjct: 323734 gccgccgccgccggggatgggg 323755
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 125 bits (63), Expect = 7e-026
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 21419800 ggtgtcacaagtgtgcataaactgtggtgtcaatatgggagagtacttttgtgatgtatg 21419859
Query: 400 caaattttatgatgatgat 418
||| |||||||||||||||
Sbjct: 21419860 caagttttatgatgatgat 21419878
Score = 115 bits (58), Expect = 7e-023
Identities = 112/130 (86%)
Strand = Plus / Plus
Query: 789 tttgggtgctttgcaacgattgcaacaaggtctcagaggtgaactttcacgtgattggcc 848
|||||||||| || || || ||||||||||||||||| ||| |||| || ||||||||||
Sbjct: 21421465 tttgggtgctctgtaatgactgcaacaaggtctcagaagtggacttccatgtgattggcc 21421524
Query: 849 acaagtgcagccactgcagatcgtacaacacccgaacaacatcgcgccctgcagatttat 908
|||||||||||||||||| |||||||| || ||| | ||||| || ||||| |||||||
Sbjct: 21421525 acaagtgcagccactgcaactcgtacaatactcgatcgacatcacggcctgcggatttat 21421584
Query: 909 ccggaagcag 918
| ||||||||
Sbjct: 21421585 caggaagcag 21421594
Score = 111 bits (56), Expect = 1e-021
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 527 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatctgttatgag 586
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21420446 cgtgataaccatcagtgtgtggagaactcaatgaggcagaattgcccaatttgttatgag 21420505
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 679 atacacttgtccaatatgctctaaaacagctcttgatttgacacatcattgggaaatgtt 738
||||||||||||||||||||| || |||||||||||| |||||||||| |||| | ||||
Sbjct: 21420789 atacacttgtccaatatgctccaagacagctcttgatatgacacatcactgggcattgtt 21420848
Query: 739 ggatcaagag 748
|||||||||
Sbjct: 21420849 agatcaagag 21420858
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 16679957 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 16680016
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 16680017 caaattttatgacgatgat 16680035
Score = 75.8 bits (38), Expect = 6e-011
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 174 ggtgcgagcattaccggcggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcc 233
|||||||||||||| || |||| |||||||||||||| || |||||| | ||||||||
Sbjct: 21418867 ggtgcgagcattacaggaggagatgcaagatcgtggcgccctgctgcggcgaggtgttcg 21418926
Query: 234 cctgccgccactgccacaacga 255
| |||||||| |||||||||||
Sbjct: 21418927 cttgccgccattgccacaacga 21418948
Score = 69.9 bits (35), Expect = 4e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 585 agtatctatttgactcattacaaggaacaagagttctgaactgtggacacacaatgcac 643
||||||||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||
Sbjct: 21420580 agtatctatttgattcattaaaaggaacacgagttctcgactgtggacacacgatgcac 21420638
Score = 58.0 bits (29), Expect = 1e-005
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 460 cagggttggtggcaaggaaaacttcttccactg 492
||||||||||||||||||||||| |||||||||
Sbjct: 21420083 cagggttggtggcaaggaaaactacttccactg 21420115
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 419 acagacaaagggcagtaccattgcatcgattgtggcatatgcagg 463
||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 21419968 acagagaaagggcagtttcattgctacgattgtggcatatgcagg 21420012
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgc 68
||||||||||||||| ||||||||||||
Sbjct: 11155721 ccctcctctccgccgccgccgccgccgc 11155694
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 18843266 ctccgccgtcgccgccgccgccg 18843244
Score = 46.1 bits (23), Expect = 0.053
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccg 70
|||||||||||||||||||||||
Sbjct: 13177011 ctccgccgtcgccgccgccgccg 13176989
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 25951840 cctctccgccgccgccgccgccgccg 25951865
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 25233317 cctctccgccgccgccgccgccgccg 25233342
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 152 gacgtgggcaagatgaagcacgggtg 177
||||||||||||||| ||||||||||
Sbjct: 21418595 gacgtgggcaagatggagcacgggtg 21418620
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1409 tatatctatacctaataataaa 1430
||||||||||||||||||||||
Sbjct: 20368540 tatatctatacctaataataaa 20368561
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ccgccgtcgccgccgccgccgg 71
||||||||||||||||||||||
Sbjct: 17005311 ccgccgtcgccgccgccgccgg 17005290
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1408 ttatatctatacctaataataa 1429
||||||||||||||||||||||
Sbjct: 8348781 ttatatctatacctaataataa 8348760
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 gccgccgccgccggggatgggg 79
||||||||||||||||||||||
Sbjct: 323734 gccgccgccgccggggatgggg 323755
>gb|AQ858103.1|AQ858103 nbeb0011N18f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0011N18f, DNA sequence
Length = 773
Score = 83.8 bits (42), Expect = 2e-013
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 813 acaaggtctcagaggtgaactttcacgtgattggccacaagtgcagccactgcagatcgt 872
||||||||||||| ||| |||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 749 acaaggtctcagaagtggacttccatgtgattggccacaagtgcagccattgcaactcgt 690
Query: 873 acaacacccgaacaacatcgcgccctgcagatttatccggaagcag 918
|||| || ||| | ||||| || | ||| |||||||| ||||||||
Sbjct: 689 acaatactcgatcgacatcacggcttgcggatttatcaggaagcag 644
>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13
of library OSJNBb from chromosome 12 of cultivar
Nipponbare of ssp. japonica of Oryza sativa (rice),
complete sequence
Length = 116974
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 58677 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 58618
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 58617 caaattttatgacgatgat 58599
>ref|NT_107149.1| Oryza sativa (japonica cultivar-group)
Length = 1071355
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 649337 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 649396
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 649397 caaattttatgacgatgat 649415
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ccgccgtcgccgccgccgccgg 71
||||||||||||||||||||||
Sbjct: 974548 ccgccgtcgccgccgccgccgg 974527
>gb|AACV01024824.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024824, whole
genome shotgun sequence
Length = 12705
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 1244 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 1185
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 1184 caaattttatgacgatgat 1166
>gb|CH401279.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000116
genomic scaffold, whole genome shotgun sequence
Length = 521340
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 340 ggtgtcacaagtgtgcataagctgtggagtcaatatgggagagtacttttgtgatatatg 399
|||||||||||||||| || |||||| ||||||||||||||||| || || ||| || |
Sbjct: 397449 ggtgtcacaagtgtgcctacgctgtgaggtcaatatgggagagtatttatgcgatgtacg 397508
Query: 400 caaattttatgatgatgat 418
|||||||||||| ||||||
Sbjct: 397509 caaattttatgacgatgat 397527
>gb|CA755537.1|CA755537 BR030023000_PLATE_B07_50_059.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030023000_PLATE_B07_50_059.ab1 similar to NP_197366.1|
(NM_121870) putative protein [Arabidopsis thaliana],
mRNA sequence
Length = 621
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 120 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 179
Query: 252 acgag 256
|||||
Sbjct: 180 acgag 184
Score = 46.1 bits (23), Expect = 0.053
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 446 gattgtggcatatgcagggttggtggcaaggaaaacttcttccactg 492
||||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 368 gattgcggcatctgcagagttggagggaaggataacttcttccactg 414
>dbj|AK059950.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B01, full
insert sequence
Length = 1059
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 113 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 172
Query: 252 acgag 256
|||||
Sbjct: 173 acgag 177
Score = 46.1 bits (23), Expect = 0.053
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 446 gattgtggcatatgcagggttggtggcaaggaaaacttcttccactg 492
||||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 361 gattgcggcatctgcagagttggagggaaggataacttcttccactg 407
>dbj|AK073680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054M17, full
insert sequence
Length = 1232
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 166 ggaggtgcacgatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 225
Query: 252 acgag 256
|||||
Sbjct: 226 acgag 230
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
complete sequence
Length = 176637
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 150145 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 150086
Query: 252 acgag 256
|||||
Sbjct: 150085 acgag 150081
>gb|AACV01006596.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006596, whole
genome shotgun sequence
Length = 12469
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 4210 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 4151
Query: 252 acgag 256
|||||
Sbjct: 4150 acgag 4146
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 4414719 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 4414660
Query: 252 acgag 256
|||||
Sbjct: 4414659 acgag 4414655
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 13144010 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 13143951
Query: 252 acgag 256
|||||
Sbjct: 13143950 acgag 13143946
Score = 44.1 bits (22), Expect = 0.21
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||| ||||||||||||| ||||||
Sbjct: 5705559 ccctcctcttcgccgtcgccgcctccgccg 5705588
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 1649117 cctctccgccgccgccgccgccgccg 1649092
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 13336372 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 13336313
Query: 252 acgag 256
|||||
Sbjct: 13336312 acgag 13336308
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 28222198 ctcctctccgccgccgccgccgccgccggg 28222169
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccgggg 73
|||||||| |||||||||||||||||
Sbjct: 31241327 ctccgccgccgccgccgccgccgggg 31241302
Score = 44.1 bits (22), Expect = 0.21
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||| ||||||||||||| ||||||
Sbjct: 5897921 ccctcctcttcgccgtcgccgcctccgccg 5897950
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 1841479 cctctccgccgccgccgccgccgccg 1841454
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 13069222 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 13069163
Query: 252 acgag 256
|||||
Sbjct: 13069162 acgag 13069158
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 27287236 ctcctctccgccgccgccgccgccgccggg 27287207
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccgggg 73
|||||||| |||||||||||||||||
Sbjct: 30380942 ctccgccgccgccgccgccgccgggg 30380917
Score = 44.1 bits (22), Expect = 0.21
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||| ||||||||||||| ||||||
Sbjct: 5674966 ccctcctcttcgccgtcgccgcctccgccg 5674995
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 1641180 cctctccgccgccgccgccgccgccg 1641155
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 192 ggaggtgcaagatcgtggcaccgtgctgcaaccaggtgttcccctgccgccactgccaca 251
||||||||| |||| ||| |||||||||||| | || |||| ||||||||| |||||||
Sbjct: 13072447 ggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccattgccaca 13072388
Query: 252 acgag 256
|||||
Sbjct: 13072387 acgag 13072383
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 27195913 ctcctctccgccgccgccgccgccgccggg 27195884
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 48 ctccgccgtcgccgccgccgccgggg 73
|||||||| |||||||||||||||||
Sbjct: 30289520 ctccgccgccgccgccgccgccgggg 30289495
Score = 44.1 bits (22), Expect = 0.21
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||| ||||||||||||| ||||||
Sbjct: 5675753 ccctcctcttcgccgtcgccgcctccgccg 5675782
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 1641182 cctctccgccgccgccgccgccgccg 1641157
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
complete sequence
Length = 100800
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 14256 ctcctctccgccgtcgccgccgccgccg 14229
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
complete sequence
Length = 108479
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 98087 ctcctctccgccgtcgccgccgccgccg 98060
>gb|AACV01012804.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012804, whole
genome shotgun sequence
Length = 36510
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 9232 ctcctctccgccgtcgccgccgccgccg 9259
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 722956 ctcctctccgccgtcgccgccgccgccg 722929
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 11489234 ctcctctccgccgtcgccgccgccgccg 11489207
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 9971364 cctctccgccgccgccgccgccgccg 9971339
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 28789547 ctcctctccgccgtcgccgccgccgccg 28789520
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgc 68
||||||||||||||||||| ||||||||
Sbjct: 13326786 ccctcctctccgccgtcgctgccgccgc 13326813
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 27271677 cctctccgccgccgccgccgccgccg 27271652
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
|||| |||||||||||||||||||||
Sbjct: 1594490 cctcgccgccgtcgccgccgccgccg 1594515
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccg 70
||||||||||||||||||||||||||||
Sbjct: 29088032 ctcctctccgccgtcgccgccgccgccg 29088005
Score = 48.1 bits (24), Expect = 0.013
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgc 68
||||||||||||||||||| ||||||||
Sbjct: 13525957 ccctcctctccgccgtcgctgccgccgc 13525984
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 50 ccgccgtcgccgccgccgccgg 71
||||||||||||||||||||||
Sbjct: 27619211 ccgccgtcgccgccgccgccgg 27619190
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 45 cctctccgccgtcgccgccgccgccg 70
||||||||||| ||||||||||||||
Sbjct: 27538775 cctctccgccgccgccgccgccgccg 27538750
Score = 44.1 bits (22), Expect = 0.21
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 cctctccgccgtcgccgccgccgccg 70
|||| |||||||||||||||||||||
Sbjct: 1602330 cctcgccgccgtcgccgccgccgccg 1602355
>gb|CB650541.1|CB650541 OSJNEb15A18.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15A18 5', mRNA sequence
Length = 769
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 107 ctcctctccgccgccgccgccgccgccggg 78
>dbj|AP003939.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1008_F04,
*** SEQUENCING IN PROGRESS ***
Length = 118128
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 66065 ccctcctctccgccgccgccgccgccgccg 66036
>dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D07, full
insert sequence
Length = 3566
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 114 ctcctctccgccgccgccgccgccgccggg 85
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0565A07
Length = 152191
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 113822 ccctcctctccgccgccgccgccgccgccg 113793
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1354_H07
Length = 157974
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 39 caccctcctctccgccgtcgccgccgccgc 68
||||||||||||||||||||||||| ||||
Sbjct: 6128 caccctcctctccgccgtcgccgccaccgc 6099
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0523A04
Length = 149049
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 18731 ccctcctctccgccgccgccgccgccgccg 18702
>ref|NT_079876.2| Oryza sativa (japonica cultivar-group)
Length = 1376782
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 348738 ccctcctctccgccgccgccgccgccgccg 348767
Score = 44.1 bits (22), Expect = 0.21
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 49 tccgccgtcgccgccgccgccg 70
||||||||||||||||||||||
Sbjct: 42357 tccgccgtcgccgccgccgccg 42336
>ref|NT_107115.1| Oryza sativa (japonica cultivar-group)
Length = 626109
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 96001 ccctcctctccgccgccgccgccgccgccg 95972
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0022O02
Length = 176625
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 81799 ccctcctctccgccgccgccgccgccgccg 81828
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
sequence
Length = 150155
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 108482 ctcctctccgccgccgccgccgccgccggg 108511
>gb|AACV01005250.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005250, whole
genome shotgun sequence
Length = 3772
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 3368 ccctcctctccgccgccgccgccgccgccg 3397
>gb|AACV01007680.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007680,
whole genome shotgun sequence
Length = 17054
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 ctcctctccgccgtcgccgccgccgccggg 72
||||||||||||| ||||||||||||||||
Sbjct: 608 ctcctctccgccgccgccgccgccgccggg 579
>gb|AACV01013943.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013943, whole
genome shotgun sequence
Length = 2044
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 1782 ccctcctctccgccgccgccgccgccgccg 1811
>gb|AACV01015530.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015530, whole
genome shotgun sequence
Length = 18192
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 4453 ccctcctctccgccgccgccgccgccgccg 4424
>gb|AACV01015632.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015632, whole
genome shotgun sequence
Length = 29182
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 39 caccctcctctccgccgtcgccgccgccgc 68
||||||||||||||||||||||||| ||||
Sbjct: 2455 caccctcctctccgccgtcgccgccaccgc 2484
>ref|XM_477213.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 294
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 41 ccctcctctccgccgtcgccgccgccgccg 70
||||||||||||||| ||||||||||||||
Sbjct: 212 ccctcctctccgccgccgccgccgccgccg 183
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,237,638
Number of Sequences: 438736
Number of extensions: 3237638
Number of successful extensions: 149109
Number of sequences better than 0.5: 395
Number of HSP's better than 0.5 without gapping: 488
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 104180
Number of HSP's gapped (non-prelim): 44597
length of query: 1437
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1416
effective length of database: 2,791,206,460
effective search space: 3952348347360
effective search space used: 3952348347360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)