BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418861.2.2
(1617 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula c... 96 1e-017
gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Me... 96 1e-017
gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell cultu... 96 1e-017
gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower M... 96 1e-017
gb|BQ149414.1|BQ149414 NF090C02FL1F1018 Developing flower M... 96 1e-017
gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula c... 96 1e-017
gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cD... 96 1e-017
gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula c... 96 1e-017
gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA... 74 4e-011
gb|AL382409.1|AL382409 MtBC06F03F1 MtBC Medicago truncatula... 74 4e-011
gb|AL382410.1|AL382410 MtBC06F03R1 MtBC Medicago truncatula... 74 4e-011
gb|BI271829.1|BI271829 NF012D11FL1F1093 Developing flower M... 74 4e-011
gb|BQ123982.1|BQ123982 EST609558 GLSD Medicago truncatula c... 74 4e-011
gb|BQ164948.1|BQ164948 EST610817 KVKC Medicago truncatula c... 74 4e-011
gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Me... 72 2e-010
gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA... 70 6e-010
gb|AL371111.1|AL371111 MtBA42A01F1 MtBA Medicago truncatula... 70 6e-010
gb|AC142396.25| Medicago truncatula clone mth2-6g9, complet... 62 2e-007
gb|AI974638.1|AI974638 T113090e KV2 Medicago truncatula cDN... 58 2e-006
emb|CR485248.1| mth2-154K9RM2 BAC end, cultivar Jemalong A1... 48 0.002
emb|CR313921.1| mte1-37A10RM1 BAC end, cultivar Jemalong A1... 46 0.009
>gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula cDNA clone pDSIR-25B19, mRNA
sequence
Length = 500
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 311 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 252
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 251 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 192
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 191 ttctcatacttgtcgacggc 172
Score = 54.0 bits (27), Expect = 4e-005
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 1020 ttattcaatccggtaactgaagttgagctaaatcttgcaatttctctcagtggtccacct 1079
||||||||||| ||||| || || ||||| |||| || ||||||||| | |||||| ||
Sbjct: 491 ttattcaatcctgtaacagatgtcgagctgaatcgtgaaatttctcttaatggtcctcca 432
Query: 1080 attccacagcccacatctaaaaccttcattcctggtttcaaaccaagttgcagggcaaga 1139
| ||||| || ||||| ||||||||| ||| || | | ||||||||| | |||||
Sbjct: 431 agaccacaaccaacatccaaaaccttctgtccgggcgtaagaccaagttgtaaagcaagg 372
Query: 1140 aaatgctcatgtcgcttgatgct 1162
|| || |||||||||||||||||
Sbjct: 371 aagtgttcatgtcgcttgatgct 349
>gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Medicago truncatula cDNA clone
NF025A06IN 5', mRNA sequence
Length = 660
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 246 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 187
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 186 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 127
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 126 ttctcatacttgtcgacggc 107
Score = 87.7 bits (44), Expect = 3e-015
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 455 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 396
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttcattc 1110
||| || ||||||||| | |||||| || || ||||| || ||||| ||||||||| ||
Sbjct: 395 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtc 336
Query: 1111 ctggtttcaaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| || | | ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 335 cgggcgtaagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 284
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 639 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 580
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 579 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 520
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 519 atcttcatgaaatcagccttgac 497
>gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell culture Medicago truncatula cDNA clone
NF045H03EC 5', mRNA sequence
Length = 635
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 273 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 214
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 213 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 154
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 153 ttctcatacttgtcgacggc 134
Score = 87.7 bits (44), Expect = 3e-015
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 482 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 423
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttcattc 1110
||| || ||||||||| | |||||| || || ||||| || ||||| ||||||||| ||
Sbjct: 422 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtc 363
Query: 1111 ctggtttcaaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| || | | ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 362 cgggcgtaagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 311
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 900 gcatcaaaagtgttgtcatcgaacggcatcttcatgaagtccgccttgac 949
||||||||| | ||||| ||||| |||||||||||||| || ||||||||
Sbjct: 573 gcatcaaaactattgtcttcgaatggcatcttcatgaaatcagccttgac 524
>gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower Medicago truncatula cDNA clone
NF019A05FL 5', mRNA sequence
Length = 691
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 291 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 232
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 231 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 172
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 171 ttctcatacttgtcgacggc 152
Score = 87.7 bits (44), Expect = 3e-015
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 500 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 441
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttcattc 1110
||| || ||||||||| | |||||| || || ||||| || ||||| ||||||||| ||
Sbjct: 440 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtc 381
Query: 1111 ctggtttcaaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| || | | ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 380 cgggcgtaagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 329
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 684 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 625
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 624 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 565
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 564 atcttcatgaaatcagccttgac 542
>gb|BQ149414.1|BQ149414 NF090C02FL1F1018 Developing flower Medicago truncatula cDNA clone
NF090C02FL 5', mRNA sequence
Length = 390
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 265 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 206
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 205 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 146
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 145 ttctcatacttgtcgacggc 126
>gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula cDNA clone pKVKC-3H9, mRNA
sequence
Length = 788
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 344 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 285
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 284 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 225
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 224 ttctcatacttgtcgacggc 205
Score = 87.7 bits (44), Expect = 3e-015
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 553 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 494
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttcattc 1110
||| || ||||||||| | |||||| || || ||||| || ||||| ||||||||| ||
Sbjct: 493 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtc 434
Query: 1111 ctggtttcaaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| || | | ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 433 cgggcgtaagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 382
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 737 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 678
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 677 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 618
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 617 atcttcatgaaatcagccttgac 595
>gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cDNA clone KV3-49B3, mRNA sequence
Length = 624
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 177 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 118
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 117 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 58
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 57 ttctcatacttgtcgacggc 38
Score = 87.7 bits (44), Expect = 3e-015
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 386 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 327
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttcattc 1110
||| || ||||||||| | |||||| || || ||||| || ||||| ||||||||| ||
Sbjct: 326 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtc 267
Query: 1111 ctggtttcaaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| || | | ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 266 cgggcgtaagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 215
Score = 61.9 bits (31), Expect = 2e-007
Identities = 106/131 (80%)
Strand = Plus / Minus
Query: 819 ccaggcttcaacacacgatatatctccttgtagcaaccaactggatcaggtgcatgacat 878
|||||||| ||||| | ||| ||||| |||||||| ||| | ||| |||||||| ||
Sbjct: 558 ccaggctttaacactctataaatctctttgtagcatccataagcatctggtgcatggcag 499
Query: 879 gttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggcatcttcatgaag 938
|| || ||||| || || || ||||||||| | ||||| ||||| ||||||||||||||
Sbjct: 498 gtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggcatcttcatgaaa 439
Query: 939 tccgccttgac 949
|| ||||||||
Sbjct: 438 tcagccttgac 428
>gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula cDNA clone HOGA-30H7, mRNA
sequence
Length = 792
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 221 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 162
Query: 1260 accatatcagtatagttggacttccttgcttcctccttccctccatagtatccatgatat 1319
||||||||| |||| || | |||||| | ||||| | ||||||||| || |||||||
Sbjct: 161 accatatcactataattagctttcctttcatcctcttgacctccataggatgcatgatac 102
Query: 1320 ttctcatactcatcgacggc 1339
|||||||||| ||||||||
Sbjct: 101 ttctcatacttgtcgacggc 82
Score = 42.1 bits (21), Expect = 0.14
Identities = 84/105 (80%)
Strand = Plus / Minus
Query: 1058 aatttctctcagtggtccacctattccacagcccacatctaaaaccttcattcctggttt 1117
||||||||| | |||||| || || ||||| || ||||| ||||||||| ||| || |
Sbjct: 363 aatttctcttaatggtcctccaataccacaaccaacatccaaaaccttctgtccgggcgt 304
Query: 1118 caaaccaagttgcagggcaagaaaatgctcatgtcgcttgatgct 1162
| ||||||||| | ||||| || || |||||||||||||||||
Sbjct: 303 aagaccaagttgtaaagcaaggaagtgttcatgtcgcttgatgct 259
>gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 555
Score = 73.8 bits (37), Expect = 4e-011
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
|||||||| |||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 136 cctttcccntggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 77
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaaccttc 1106
||| || ||||||||| | |||||| || || ||||| || ||||| |||||||||
Sbjct: 76 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttc 21
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 320 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 261
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 260 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 201
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 200 atcttcatgaaatcagccttgac 178
>gb|AL382409.1|AL382409 MtBC06F03F1 MtBC Medicago truncatula cDNA clone MtBC06F03 T3, mRNA
sequence
Length = 397
Score = 73.8 bits (37), Expect = 4e-011
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 404 aaagaagtacattggcgtgaagatctccttctttccgccctctaccagcccttctgcagc 463
||||||||||||||| ||||||||||| ||||||| || || || || || ||||||||
Sbjct: 174 aaagaagtacattggtgtgaagatctctctctttccaccttcaactagaccctctgcagc 115
Query: 464 cttctccaggaaat-tagagaccctctcactgccctgcggagcaagaccaacgtactcca 522
|||||| ||||||| | || ||||| | ||| |||| ||||||||| ||||| ||||||
Sbjct: 114 cttctcaaggaaatcttga-accctttgactccccttcggagcaagtccaacaaactcca 56
Query: 523 gggccttgaccat 535
| ||||| |||||
Sbjct: 55 gagccttcaccat 43
>gb|AL382410.1|AL382410 MtBC06F03R1 MtBC Medicago truncatula cDNA clone MtBC06F03 T7, mRNA
sequence
Length = 422
Score = 73.8 bits (37), Expect = 4e-011
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 404 aaagaagtacattggcgtgaagatctccttctttccgccctctaccagcccttctgcagc 463
||||||||||||||| ||||||||||| ||||||| || || || || || ||||||||
Sbjct: 174 aaagaagtacattggtgtgaagatctctctctttccaccttcaactagaccctctgcagc 115
Query: 464 cttctccaggaaat-tagagaccctctcactgccctgcggagcaagaccaacgtactcca 522
|||||| ||||||| | || ||||| | ||| |||| ||||||||| ||||| ||||||
Sbjct: 114 cttctcaaggaaatcttga-accctttgactccccttcggagcaagtccaacaaactcca 56
Query: 523 gggccttgaccat 535
| ||||| |||||
Sbjct: 55 gagccttcaccat 43
>gb|BI271829.1|BI271829 NF012D11FL1F1093 Developing flower Medicago truncatula cDNA clone
NF012D11FL 5', mRNA sequence
Length = 675
Score = 73.8 bits (37), Expect = 4e-011
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 404 aaagaagtacattggcgtgaagatctccttctttccgccctctaccagcccttctgcagc 463
||||||||||||||| ||||||||||| ||||||| || || || || || ||||||||
Sbjct: 523 aaagaagtacattggtgtgaagatctctctctttccaccttcaactagaccctctgcagc 464
Query: 464 cttctccaggaaat-tagagaccctctcactgccctgcggagcaagaccaacgtactcca 522
|||||| ||||||| | || ||||| | ||| |||| ||||||||| ||||| ||||||
Sbjct: 463 cttctcaaggaaatcttga-accctttgactccccttcggagcaagtccaacaaactcca 405
Query: 523 gggccttgaccat 535
| ||||| |||||
Sbjct: 404 gagccttcaccat 392
>gb|BQ123982.1|BQ123982 EST609558 GLSD Medicago truncatula cDNA clone pGLSD-34A5, mRNA
sequence
Length = 504
Score = 73.8 bits (37), Expect = 4e-011
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 404 aaagaagtacattggcgtgaagatctccttctttccgccctctaccagcccttctgcagc 463
||||||||||||||| ||||||||||| ||||||| || || || || || ||||||||
Sbjct: 258 aaagaagtacattggtgtgaagatctctctctttccaccttcaactagaccctctgcagc 317
Query: 464 cttctccaggaaat-tagagaccctctcactgccctgcggagcaagaccaacgtactcca 522
|||||| ||||||| | || ||||| | ||| |||| ||||||||| ||||| ||||||
Sbjct: 318 cttctcaaggaaatcttga-accctttgactccccttcggagcaagtccaacaaactcca 376
Query: 523 gggccttgaccat 535
| ||||| |||||
Sbjct: 377 gagccttcaccat 389
>gb|BQ164948.1|BQ164948 EST610817 KVKC Medicago truncatula cDNA clone pKVKC-3H9, mRNA
sequence
Length = 778
Score = 73.8 bits (37), Expect = 4e-011
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 404 aaagaagtacattggcgtgaagatctccttctttccgccctctaccagcccttctgcagc 463
||||||||||||||| ||||||||||| ||||||| || || || || || ||||||||
Sbjct: 260 aaagaagtacattggtgtgaagatctctctctttccaccttcaactagaccctctgcagc 319
Query: 464 cttctccaggaaat-tagagaccctctcactgccctgcggagcaagaccaacgtactcca 522
|||||| ||||||| | || ||||| | ||| |||| ||||||||| ||||| ||||||
Sbjct: 320 cttctcaaggaaatcttga-accctttgactccccttcggagcaagtccaacaaactcca 378
Query: 523 gggccttgaccat 535
| ||||| |||||
Sbjct: 379 gagccttcaccat 391
>gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF046F07IN 5', mRNA sequence
Length = 670
Score = 71.9 bits (36), Expect = 2e-010
Identities = 93/112 (83%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaa 1050
||||||||||||| |||||||| || || ||||||||||| ||||| || || ||||| |
Sbjct: 112 cctttcccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctga 53
Query: 1051 atcttgcaatttctctcagtggtccacctattccacagcccacatctaaaac 1102
||| || ||||||||| | |||||| || || ||||| || ||||| |||||
Sbjct: 52 atcgtgaaatttctcttaatggtcctccaataccacaaccaacatccaaaac 1
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 296 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 237
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 236 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 177
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 176 atcttcatgaaatcagccttgac 154
>gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 576
Score = 69.9 bits (35), Expect = 6e-010
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 996 cccctggttatctggtattcgttgttattcaatccggtaactgaagttgagctaaatctt 1055
|||||||| |||||||| || || ||||||||||| ||||| || || ||||| |||| |
Sbjct: 131 cccctggtgatctggtactcattattattcaatcctgtaacagatgtcgagctgaatcgt 72
Query: 1056 gcaatttctctcagtggtccacctattccacagcccacatctaaaaccttc 1106
| ||||||||| | |||||| || || ||||| || ||||| |||||||||
Sbjct: 71 gaaatttctcttaatggtcctccaataccacaaccaacatccaaaaccttc 21
Score = 56.0 bits (28), Expect = 1e-005
Identities = 116/144 (80%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 322 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 263
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 262 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 203
Query: 927 atctt-catgaagtccgccttgac 949
||||| |||||| || ||||||||
Sbjct: 202 atcttncatgaaatcagccttgac 179
>gb|AL371111.1|AL371111 MtBA42A01F1 MtBA Medicago truncatula cDNA clone MtBA42A01 T3, mRNA
sequence
Length = 489
Score = 69.9 bits (35), Expect = 6e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 807 gcaaagcactggccaggcttcaacacacgatatatctccttgtagcaaccaactggatca 866
||||| || ||||||||||| ||||| | ||| ||||| |||||||| ||| | |||
Sbjct: 172 gcaaaacattggccaggctttaacactctataaatctctttgtagcatccataagcatct 113
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 112 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 53
Query: 927 atcttcatgaagtccgccttgac 949
||||||||||| || ||||||||
Sbjct: 52 atcttcatgaaatcagccttgac 30
>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
Length = 106058
Score = 61.9 bits (31), Expect = 2e-007
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1200 tggaaggattcaccccaaccatactcatagaagctagtggcaagatcatagtatttatta 1259
||||| ||||| ||||| ||| | ||||| ||||| || |||||||||||||||||||||
Sbjct: 54614 tggaaagattccccccagccaaattcataaaagcttgtcgcaagatcatagtatttatta 54555
Query: 1260 acc 1262
|||
Sbjct: 54554 acc 54552
Score = 52.0 bits (26), Expect = 2e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 991 cctttcccctggttatctggtattcgttgttattcaatccggtaac 1036
||||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 55461 cctttcccctggtgatctggtactcattattattcaatcctgtaac 55416
Score = 46.1 bits (23), Expect = 0.009
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 404 aaagaagtacattggcgtgaagatctc 430
||||||||||||||| |||||||||||
Sbjct: 59077 aaagaagtacattggtgtgaagatctc 59051
Score = 46.1 bits (23), Expect = 0.009
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 56758 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 56699
Query: 927 atcttcatgaa 937
|||||||||||
Sbjct: 56698 atcttcatgaa 56688
>gb|AI974638.1|AI974638 T113090e KV2 Medicago truncatula cDNA clone pKV2-1E5, mRNA sequence
Length = 362
Score = 58.0 bits (29), Expect = 2e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 1239 gcaagatcatagtatttattaaccatatcagtatagttggacttccttgcttcctccttc 1298
||||||||||| |||||||||||||||| |||| || | |||||| | ||||| |
Sbjct: 355 gcaagatcataagttttattaaccatatcactataattagctttcctttcatcctcttga 296
Query: 1299 cctccatagtatccatgatatttctcatactcatcgacggc 1339
||||||||| || ||||||| |||||||||| ||||||||
Sbjct: 295 cctccataggatgcatgatacttctcatacttgtcgacggc 255
>emb|CR485248.1| mth2-154K9RM2 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 666
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1239 gcaagatcatagtatttattaacc 1262
||||||||||||||||||||||||
Sbjct: 9 gcaagatcatagtatttattaacc 32
>emb|CR313921.1| mte1-37A10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 554
Score = 46.1 bits (23), Expect = 0.009
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 867 ggtgcatgacatgttgcctcaatggcgtaaacagcatcaaaagtgttgtcatcgaacggc 926
|||||||| || || || ||||| || || || ||||||||| | ||||| ||||| |||
Sbjct: 228 ggtgcatggcaggtggcttcaatagcatacactgcatcaaaactattgtcttcgaatggc 169
Query: 927 atcttcatgaa 937
|||||||||||
Sbjct: 168 atcttcatgaa 158
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 361,829
Number of Sequences: 392609
Number of extensions: 361829
Number of successful extensions: 28542
Number of sequences better than 0.5: 21
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28452
Number of HSP's gapped (non-prelim): 84
length of query: 1617
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1597
effective length of database: 433,880,813
effective search space: 692907658361
effective search space used: 692907658361
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)