BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204472.2.1
(757 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedl... 466 e-130
gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedl... 466 e-130
gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedl... 466 e-130
gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedl... 462 e-129
gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedl... 456 e-127
emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotra... 456 e-127
gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiol... 454 e-126
gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedl... 452 e-126
gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiol... 444 e-123
gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. v... 440 e-122
gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiol... 426 e-118
gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, sal... 426 e-118
gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. v... 420 e-116
gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthe... 420 e-116
gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedl... 418 e-115
gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. v... 418 e-115
gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no... 410 e-113
gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthe... 410 e-113
gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. v... 398 e-109
gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiol... 396 e-109
gb|AL500119.1|AL500119 AL500119 Hordeum vulgare Barke etiol... 394 e-108
gb|AL500052.1|AL500052 AL500052 Hordeum vulgare Barke etiol... 387 e-106
gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedl... 381 e-104
gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. v... 381 e-104
gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedl... 371 e-101
gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachi... 371 e-101
gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachi... 371 e-101
gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 ... 371 e-101
gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedl... 369 e-101
gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedl... 365 1e-099
gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. v... 361 2e-098
gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. v... 361 2e-098
emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotra... 361 2e-098
gb|AW982755.3|AW982755 HVSMEg0004C03f Hordeum vulgare pre-a... 357 3e-097
gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. v... 355 1e-096
gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. v... 355 1e-096
gb|CB877507.1|CB877507 HP05D02T HP Hordeum vulgare subsp. v... 355 1e-096
gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-a... 353 5e-096
gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, red... 349 8e-095
gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. v... 347 3e-094
gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedl... 345 1e-093
gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedl... 341 2e-092
gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. v... 341 2e-092
gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachi... 333 5e-090
gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedl... 323 5e-087
gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. v... 317 3e-085
gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedl... 307 3e-082
gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedl... 307 3e-082
gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-a... 307 3e-082
gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots... 303 4e-081
gb|BF629710.1|BF629710 HVSMEb0013D21f Hordeum vulgare seedl... 303 4e-081
gb|BF618456.2|BF618456 HVSMEc0005L21f Hordeum vulgare seedl... 303 4e-081
gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachi... 303 4e-081
gb|CB877582.1|CB877582 HP05H06T HP Hordeum vulgare subsp. v... 297 3e-079
gb|BE194552.3|BE194552 HVSMEh0085P21f Hordeum vulgare 5-45 ... 285 1e-075
gb|BF620035.2|BF620035 HVSMEc0011F01f Hordeum vulgare seedl... 280 6e-074
gb|CA003718.1|CA003718 HS15F14r HS Hordeum vulgare subsp. v... 278 3e-073
gb|BQ461043.1|BQ461043 HE01F23r HE Hordeum vulgare subsp. v... 274 4e-072
gb|BQ662128.1|BQ662128 HR01K20u HR Hordeum vulgare subsp. v... 272 2e-071
gb|BG309764.2|BG309764 HVSMEc0012H20f Hordeum vulgare seedl... 270 6e-071
gb|BQ467575.1|BQ467575 HS04D13r HS Hordeum vulgare subsp. v... 270 6e-071
gb|CA003908.1|CA003908 HS15O19r HS Hordeum vulgare subsp. v... 270 6e-071
gb|CA022401.1|CA022401 HZ43A12r HZ Hordeum vulgare subsp. v... 262 2e-068
gb|CA027287.1|CA027287 HZ58H04r HZ Hordeum vulgare subsp. v... 262 2e-068
gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. v... 248 2e-064
gb|CA023472.1|CA023472 HZ46F16r HZ Hordeum vulgare subsp. v... 246 9e-064
gb|BI777946.1|BI777946 EBro07_SQ001_H07_R root, 3 week, red... 244 4e-063
gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedl... 240 6e-062
gb|BF628305.2|BF628305 HVSMEb0003K21f Hordeum vulgare seedl... 238 2e-061
gb|BQ462553.1|BQ462553 HI01E04T HI Hordeum vulgare subsp. v... 232 1e-059
gb|AL450919.1|AL450919 AL450919 Hordeum vulgare Barke etiol... 230 5e-059
gb|CA001720.1|CA001720 HS05G04r HS Hordeum vulgare subsp. v... 226 8e-058
gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedl... 224 3e-057
gb|BF627541.2|BF627541 HVSMEb0005C03f Hordeum vulgare seedl... 220 5e-056
gb|BG309189.1|BG309189 HVSMEc0004M02f Hordeum vulgare seedl... 200 5e-050
gb|BI959592.1|BI959592 HVSMEn0020F05f Hordeum vulgare rachi... 194 3e-048
gb|BI954358.1|BI954358 HVSMEm0017G17f Hordeum vulgare green... 192 1e-047
gb|AL500197.1|AL500197 AL500197 Hordeum vulgare Barke etiol... 190 5e-047
gb|BQ468552.1|BQ468552 HM01J07T HM Hordeum vulgare subsp. v... 182 1e-044
gb|BF618504.2|BF618504 HVSMEc0005O01f Hordeum vulgare seedl... 178 2e-043
gb|BI956709.1|BI956709 HVSMEn0004O06f Hordeum vulgare rachi... 172 1e-041
gb|BM369898.2|BM369898 EBem07_SQ004_O19_R embryo, 28 DPA, n... 172 1e-041
gb|BI953155.1|BI953155 HVSMEm0011G01f Hordeum vulgare green... 170 4e-041
gb|BQ462489.1|BQ462489 HI01A16T HI Hordeum vulgare subsp. v... 157 6e-037
gb|BQ463558.1|BQ463558 HI05L07r HI Hordeum vulgare subsp. v... 157 6e-037
gb|BU971930.1|BU971930 HB20B14r BC Hordeum vulgare subsp. v... 135 2e-030
gb|BQ470477.1|BQ470477 HX03B16r HX Hordeum vulgare subsp. v... 133 9e-030
gb|BQ756159.1|BQ756159 EBem05_SQ001_P17_R embryo, 14 DPA, n... 131 4e-029
gb|BI956177.1|BI956177 HVSMEm0025O16f Hordeum vulgare green... 129 1e-028
gb|CA021189.1|CA021189 HZ39G03r HZ Hordeum vulgare subsp. v... 125 2e-027
gb|CB878261.1|CB878261 HP07O06T HP Hordeum vulgare subsp. v... 121 4e-026
gb|BF631401.2|BF631401 HVSMEb0015N09f Hordeum vulgare seedl... 119 1e-025
gb|BE194548.2|BE194548 HVSMEh0085P11f Hordeum vulgare 5-45 ... 107 5e-022
gb|BF629241.2|BF629241 HVSMEb0010H14f Hordeum vulgare seedl... 105 2e-021
gb|CA023198.1|CA023198 HZ45I10r HZ Hordeum vulgare subsp. v... 105 2e-021
gb|CA030559.1|CA030559 HX07G17r HX Hordeum vulgare subsp. v... 105 2e-021
gb|AW982395.1|AW982395 HVSMEg0003C13f Hordeum vulgare pre-a... 100 1e-019
gb|BG368127.1|BG368127 HVSMEi0015M23f Hordeum vulgare 20 DA... 100 1e-019
gb|BF630403.2|BF630403 HVSMEb0009B18f Hordeum vulgare seedl... 98 5e-019
gb|BF631048.2|BF631048 HVSMEb0014N08f Hordeum vulgare seedl... 98 5e-019
gb|BF631110.2|BF631110 HVSMEb0015A04f Hordeum vulgare seedl... 98 5e-019
gb|BG301313.2|BG301313 HVSMEb0020K16f Hordeum vulgare seedl... 98 5e-019
gb|AV914496.1|AV914496 AV914496 K. Sato unpublished cDNA li... 98 5e-019
gb|AV922775.1|AV922775 AV922775 K. Sato unpublished cDNA li... 98 5e-019
gb|AV922899.1|AV922899 AV922899 K. Sato unpublished cDNA li... 98 5e-019
gb|AV924203.1|AV924203 AV924203 K. Sato unpublished cDNA li... 98 5e-019
gb|AV927108.1|AV927108 AV927108 K. Sato unpublished cDNA li... 98 5e-019
gb|BJ446906.1|BJ446906 BJ446906 K. Sato unpublished cDNA li... 98 5e-019
gb|BJ447562.1|BJ447562 BJ447562 K. Sato unpublished cDNA li... 98 5e-019
gb|BJ463118.1|BJ463118 BJ463118 K. Sato unpublished cDNA li... 98 5e-019
gb|BI778147.2|BI778147 EBro07_SQ002_F18_R root, 3 week, red... 98 5e-019
emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotra... 98 5e-019
gb|BF257690.2|BF257690 HVSMEf0013J17f Hordeum vulgare seedl... 92 3e-017
gb|CA023772.1|CA023772 HZ47F20r HZ Hordeum vulgare subsp. v... 92 3e-017
gb|BF630623.2|BF630623 HVSMEb0012E18f Hordeum vulgare seedl... 90 1e-016
gb|BF618866.2|BF618866 HVSMEc0008D05f Hordeum vulgare seedl... 90 1e-016
gb|BF620598.2|BF620598 HVSMEc0020F14f Hordeum vulgare seedl... 90 1e-016
gb|BF263162.2|BF263162 HV_CEa0006A01f Hordeum vulgare seedl... 90 1e-016
gb|AL450708.1|AL450708 AL450708 Hordeum vulgare Barke etiol... 86 2e-015
gb|BF620863.2|BF620863 HVSMEa0003F12f Hordeum vulgare seedl... 86 2e-015
gb|BF622776.2|BF622776 HVSMEa0008K20f Hordeum vulgare seedl... 86 2e-015
gb|BQ460892.1|BQ460892 HE01O03r HE Hordeum vulgare subsp. v... 86 2e-015
gb|BQ471752.1|BQ471752 HV03F21r HV Hordeum vulgare subsp. v... 86 2e-015
gb|BI780996.2|BI780996 EBma03_SQ001_B17_R maternal, 8 DPA, ... 86 2e-015
gb|CA026923.1|CA026923 HZ57F20r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CA028069.1|CA028069 HZ60O07r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CA029613.1|CA029613 HZ65L12r HZ Hordeum vulgare subsp. v... 86 2e-015
emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan tr... 86 2e-015
gb|BI956298.1|BI956298 HVSMEn0002B22f Hordeum vulgare rachi... 84 8e-015
gb|BM816097.1|BM816097 HC111H09_T3.ab1 HC Hordeum vulgare s... 84 8e-015
gb|BF622057.1|BF622057 HVSMEa0001K09f Hordeum vulgare seedl... 82 3e-014
gb|BI959504.1|BI959504 HVSMEn0019O24f Hordeum vulgare rachi... 82 3e-014
gb|BQ760822.1|BQ760822 EBro03_SQ003_J06_R root, 3 week, wat... 82 3e-014
gb|BQ762342.1|BQ762342 EBro01_SQ005_F13_R root, 3 week, hyd... 82 3e-014
gb|BG343074.1|BG343074 HVSMEg0001P08f Hordeum vulgare pre-a... 80 1e-013
gb|BM444292.1|BM444292 EBem09_SQ004_L15_R embryo, 1 Day ger... 80 1e-013
gb|BU998122.1|BU998122 HI10B03r HI Hordeum vulgare subsp. v... 80 1e-013
gb|CA031564.1|CA031564 HX10H03r HX Hordeum vulgare subsp. v... 80 1e-013
gb|CB883507.1|CB883507 HQ02H12w HQ Hordeum vulgare subsp. v... 80 1e-013
gb|BF617914.1|BF617914 HVSMEc0002H15f Hordeum vulgare seedl... 78 5e-013
gb|BM816264.1|BM816264 HB01H02_T3.ab1 HB Hordeum vulgare su... 78 5e-013
gb|CB875146.1|CB875146 HX07G17w HX Hordeum vulgare subsp. v... 78 5e-013
gb|AL450722.1|AL450722 AL450722 Hordeum vulgare Barke etiol... 76 2e-012
gb|BI956578.1|BI956578 HVSMEn0004D19f Hordeum vulgare rachi... 76 2e-012
gb|BE454828.3|BE454828 HVSMEh0095D10f Hordeum vulgare 5-45 ... 76 2e-012
gb|AV927496.1|AV927496 AV927496 K. Sato unpublished cDNA li... 76 2e-012
gb|AV930767.1|AV930767 AV930767 K. Sato unpublished cDNA li... 76 2e-012
gb|BQ459051.1|BQ459051 HA02H07r HA Hordeum vulgare subsp. v... 76 2e-012
gb|BQ469314.1|BQ469314 HM04C11r HM Hordeum vulgare subsp. v... 76 2e-012
gb|BQ767749.1|BQ767749 EBro08_SQ009_B20_R root, 3 week, dro... 76 2e-012
gb|BM816111.1|BM816111 HC113E12_SK.ab1 HC Hordeum vulgare s... 74 7e-012
gb|BE422291.1|BE422291 HWM022cE.11r ITEC HWM Barley Leaf Li... 72 3e-011
gb|BF620985.1|BF620985 HVSMEa0003D18f Hordeum vulgare seedl... 72 3e-011
gb|BF629934.2|BF629934 HVSMEb0007F23f Hordeum vulgare seedl... 72 3e-011
gb|BF629579.2|BF629579 HVSMEb0013G15f Hordeum vulgare seedl... 72 3e-011
gb|BG300161.1|BG300161 HVSMEb0010K02f Hordeum vulgare seedl... 72 3e-011
gb|BI958669.1|BI958669 HVSMEn0016C05f Hordeum vulgare rachi... 72 3e-011
gb|AV916008.1|AV916008 AV916008 K. Sato unpublished cDNA li... 72 3e-011
gb|AV921125.1|AV921125 AV921125 K. Sato unpublished cDNA li... 72 3e-011
gb|AV925293.1|AV925293 AV925293 K. Sato unpublished cDNA li... 72 3e-011
gb|AV928124.1|AV928124 AV928124 K. Sato unpublished cDNA li... 72 3e-011
gb|BJ468727.1|BJ468727 BJ468727 K. Sato unpublished cDNA li... 72 3e-011
gb|BQ460993.1|BQ460993 HE01I24r HE Hordeum vulgare subsp. v... 72 3e-011
gb|CA008408.1|CA008408 HU10N24r HU Hordeum vulgare subsp. v... 72 3e-011
gb|CK122280.1|CK122280 BES1824102l14 BES1824 Hordeum vulgar... 72 3e-011
emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotr... 72 3e-011
gb|BG343644.2|BG343644 HVSMEg0006B21f Hordeum vulgare pre-a... 68 5e-010
gb|BQ763770.1|BQ763770 EBro03_SQ005_J09_R root, 3 week, wat... 68 5e-010
gb|BF623367.2|BF623367 HVSMEa0015K08f Hordeum vulgare seedl... 64 7e-009
gb|BF626811.2|BF626811 HVSMEb0001G10f Hordeum vulgare seedl... 62 3e-008
gb|BU995418.1|BU995418 HM10D05r HM Hordeum vulgare subsp. v... 60 1e-007
gb|BI956580.1|BI956580 HVSMEn0004E02f Hordeum vulgare rachi... 58 4e-007
gb|BQ470845.1|BQ470845 HX04D09r HX Hordeum vulgare subsp. v... 58 4e-007
gb|BI958667.1|BI958667 HVSMEn0016C03f Hordeum vulgare rachi... 56 2e-006
gb|BM097637.2|BM097637 EBem04_SQ002_E13_R embryo, 12 DPA, n... 56 2e-006
gb|BM377806.2|BM377806 EBem04_SQ004_D21_R embryo, 12 DPA, n... 56 2e-006
gb|BU971950.1|BU971950 HB20C15r BC Hordeum vulgare subsp. v... 56 2e-006
gb|CA024667.1|CA024667 HZ49P10r HZ Hordeum vulgare subsp. v... 56 2e-006
gb|CA029997.1|CA029997 HX05M19r HX Hordeum vulgare subsp. v... 56 2e-006
gb|CA031859.1|CA031859 HX11F08r HX Hordeum vulgare subsp. v... 56 2e-006
gb|CA031894.1|CA031894 HX11G24r HX Hordeum vulgare subsp. v... 56 2e-006
gb|BF256789.2|BF256789 HVSMEf0011A08f Hordeum vulgare seedl... 54 7e-006
gb|BQ767223.1|BQ767223 EBro08_SQ008_F10_R root, 3 week, dro... 54 7e-006
gb|CA018175.1|CA018175 HV07M23r HV Hordeum vulgare subsp. v... 54 7e-006
gb|BF254306.2|BF254306 HVSMEf0003J15f Hordeum vulgare seedl... 52 3e-005
gb|BI959766.1|BI959766 HVSMEn0021F17f Hordeum vulgare rachi... 50 1e-004
gb|BF257539.3|BF257539 HVSMEf0013D01f Hordeum vulgare seedl... 50 1e-004
gb|BF259456.3|BF259456 HVSMEf0019C15f Hordeum vulgare seedl... 50 1e-004
gb|BQ660118.1|BQ660118 HI01A16w HI Hordeum vulgare subsp. v... 50 1e-004
gb|BM100605.2|BM100605 EBma01_SQ005_L10_R maternal, 4 DPA, ... 50 1e-004
gb|BQ763335.1|BQ763335 EBro02_SQ008_B04_R root, 3 week, hyd... 50 1e-004
gb|BU988965.1|BU988965 HF19F01r HF Hordeum vulgare subsp. v... 50 1e-004
gb|BU996830.1|BU996830 HM14O16r HM Hordeum vulgare subsp. v... 50 1e-004
gb|AL499877.1|AL499877 AL499877 Hordeum vulgare Barke etiol... 48 4e-004
gb|BF618271.2|BF618271 HVSMEc0005D16f Hordeum vulgare seedl... 48 4e-004
gb|BI947027.1|BI947027 HVSMEl0003E20f Hordeum vulgare spike... 48 4e-004
gb|BI956297.1|BI956297 HVSMEn0002B20f Hordeum vulgare rachi... 48 4e-004
gb|AV914498.1|AV914498 AV914498 K. Sato unpublished cDNA li... 48 4e-004
gb|AV915915.1|AV915915 AV915915 K. Sato unpublished cDNA li... 48 4e-004
gb|AV919562.1|AV919562 AV919562 K. Sato unpublished cDNA li... 48 4e-004
gb|AV926405.1|AV926405 AV926405 K. Sato unpublished cDNA li... 48 4e-004
gb|AV931287.1|AV931287 AV931287 K. Sato unpublished cDNA li... 48 4e-004
gb|BM816265.1|BM816265 HB02B10_T3.ab1 HB Hordeum vulgare su... 48 4e-004
gb|BJ465036.1|BJ465036 BJ465036 K. Sato unpublished cDNA li... 48 4e-004
gb|BJ468104.1|BJ468104 BJ468104 K. Sato unpublished cDNA li... 48 4e-004
gb|CA026314.1|CA026314 HZ55I22r HZ Hordeum vulgare subsp. v... 48 4e-004
gb|CB882213.1|CB882213 HL01D12w HL Hordeum vulgare subsp. v... 48 4e-004
gb|CB882375.1|CB882375 HL01L03w HL Hordeum vulgare subsp. v... 48 4e-004
gb|BI958113.1|BI958113 HVSMEn0013H08f Hordeum vulgare rachi... 44 0.007
gb|BF627429.2|BF627429 HVSMEb0004N10f Hordeum vulgare seedl... 42 0.026
gb|BG300536.1|BG300536 HVSMEb0017G11f Hordeum vulgare seedl... 42 0.026
gb|BF267800.2|BF267800 HV_CEa0018O20f Hordeum vulgare seedl... 42 0.026
gb|BF256171.2|BF256171 HVSMEf0008P16f Hordeum vulgare seedl... 42 0.026
gb|AV930447.1|AV930447 AV930447 K. Sato unpublished cDNA li... 42 0.026
gb|BQ465021.1|BQ465021 HU02G22r HU Hordeum vulgare subsp. v... 42 0.026
gb|BQ761701.1|BQ761701 EBem10_SQ001_H16_R embryo, 2 Day ger... 42 0.026
gb|AL508924.1|AL508924 AL508924 Hordeum vulgare Barke devel... 40 0.10
gb|BF254365.2|BF254365 HVSMEf0003M13f Hordeum vulgare seedl... 40 0.10
gb|BF257684.2|BF257684 HVSMEf0013J11f Hordeum vulgare seedl... 40 0.10
gb|BG369304.1|BG369304 HVSMEi0023M11f Hordeum vulgare 20 DA... 40 0.10
gb|BG369614.1|BG369614 HVSMEi0025D06f Hordeum vulgare 20 DA... 40 0.10
gb|AV914175.1|AV914175 AV914175 K. Sato unpublished cDNA li... 40 0.10
gb|AV917493.1|AV917493 AV917493 K. Sato unpublished cDNA li... 40 0.10
gb|AV922202.1|AV922202 AV922202 K. Sato unpublished cDNA li... 40 0.10
gb|AV928690.1|AV928690 AV928690 K. Sato unpublished cDNA li... 40 0.10
gb|AV931558.1|AV931558 AV931558 K. Sato unpublished cDNA li... 40 0.10
gb|AJ462535.1|AJ462535 AJ462535 S00002 Hordeum vulgare subs... 40 0.10
gb|AJ462537.1|AJ462537 AJ462537 S00002 Hordeum vulgare subs... 40 0.10
gb|BJ462411.1|BJ462411 BJ462411 K. Sato unpublished cDNA li... 40 0.10
gb|BJ465963.1|BJ465963 BJ465963 K. Sato unpublished cDNA li... 40 0.10
gb|BJ466702.1|BJ466702 BJ466702 K. Sato unpublished cDNA li... 40 0.10
gb|BJ467026.1|BJ467026 BJ467026 K. Sato unpublished cDNA li... 40 0.10
gb|BJ467832.1|BJ467832 BJ467832 K. Sato unpublished cDNA li... 40 0.10
gb|BQ467584.1|BQ467584 HS04E02r HS Hordeum vulgare subsp. v... 40 0.10
gb|BQ662805.1|BQ662805 HS04E02u HS Hordeum vulgare subsp. v... 40 0.10
gb|BQ662975.1|BQ662975 HT01A21w HT Hordeum vulgare subsp. v... 40 0.10
gb|BQ665427.1|BQ665427 HX03J05u HX Hordeum vulgare subsp. v... 40 0.10
gb|BQ760702.1|BQ760702 EBro03_SQ003_D20_R root, 3 week, wat... 40 0.10
gb|BQ766388.1|BQ766388 EBro08_SQ005_I20_R root, 3 week, dro... 40 0.10
gb|BU985048.1|BU985048 HF05P20r HF Hordeum vulgare subsp. v... 40 0.10
gb|CA010218.1|CA010218 HT11H16u HT Hordeum vulgare subsp. v... 40 0.10
gb|CA011271.1|CA011271 HT05P14u HT Hordeum vulgare subsp. v... 40 0.10
gb|CA025893.1|CA025893 HZ53H04r HZ Hordeum vulgare subsp. v... 40 0.10
gb|CB875382.1|CB875382 HX08C02w HX Hordeum vulgare subsp. v... 40 0.10
gb|CB875619.1|CB875619 HX08N20w HX Hordeum vulgare subsp. v... 40 0.10
>gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017J11f, mRNA sequence
Length = 876
Score = 466 bits (235), Expect = e-130
Identities = 374/418 (89%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 615 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 556
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 555 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 496
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 495 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 436
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 435 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 376
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 375 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 317
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 316 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 257
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 256 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 199
>gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018L19f, mRNA sequence
Length = 607
Score = 466 bits (235), Expect = e-130
Identities = 374/418 (89%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 606 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 547
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 546 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 487
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 486 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 427
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 426 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 367
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 366 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 308
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 307 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 248
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 247 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 190
>gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016C04f, mRNA sequence
Length = 831
Score = 466 bits (235), Expect = e-130
Identities = 374/418 (89%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 612 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 553
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 552 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 493
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 492 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 433
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 432 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 373
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 372 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 314
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 313 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 254
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 253 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 196
>gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010E08f, mRNA sequence
Length = 788
Score = 462 bits (233), Expect = e-129
Identities = 450/520 (86%), Gaps = 3/520 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | | ||||||||||| |||| ||||| ||||||| |||||
Sbjct: 603 ccagtcgtcggcgttccagaggttggagtagagccgcatgggctggttcttggggaacgc 544
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 543 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 484
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 483 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 424
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 423 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 364
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 363 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 305
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 304 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 245
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccggacg 470
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 244 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccggaga 185
Query: 471 tgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgc 530
|||||| ||||||||| ||| | ||||||| |||| |||||| |||||||| |
Sbjct: 184 ccttgtccagtcccagcgtcaggagctggccgttgttgaggatcttgccgcgcccgtcac 125
Query: 531 cccacgtgatgtccagctcctggtccaagctgcccgccgc 570
|||| || | ||| | ||||| ||||||||| |||||||
Sbjct: 124 cccaggtaacgtcgaactccttgtccaagcttgccgccgc 85
>gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005K17f, mRNA sequence
Length = 831
Score = 456 bits (230), Expect = e-127
Identities = 370/417 (88%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| || ||
Sbjct: 622 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaaggc 563
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||| ||||||||||||||
Sbjct: 562 gatcccctttccctccaggttcttgaagtccctgatcggcatgtcatccaccatgaagat 503
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 502 gatgtgctttgggttccaaaggatggagtaggtgtggaagtcgttggtgggatcgaacca 443
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 442 gaggcggaactgctgctcccgctggccctgcccctgcgtgaacacgttggtgtgcagcgt 383
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgcc 351
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 382 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtaggacc 323
Query: 352 ctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcag 411
|||||||||||||||||||||||| |||||||||||||||||||| || || ||| ||
Sbjct: 322 ctgcgacgacaggtagtaggcggttacggtgccggcggagttgccggggacgagcttgag 263
Query: 412 ctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 262 ttgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 206
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEA)
Length = 1174
Score = 456 bits (230), Expect = e-127
Identities = 370/417 (88%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 621 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 562
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 561 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 502
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 501 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 442
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 441 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 382
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgcc 351
|||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 381 gtagggctcgccggtgacgtttcccaggaactcgaagtcgatctcgtcgtgcgtcggacc 322
Query: 352 ctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcag 411
|||||||||||||||||||||||| ||||||||||| |||||||| || || ||| ||
Sbjct: 321 ctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttgag 262
Query: 412 ctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 261 ctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 205
>gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05A03r 3', mRNA sequence
Length = 439
Score = 454 bits (229), Expect = e-126
Identities = 372/418 (88%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 9 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 68
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 69 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 128
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 129 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 188
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 189 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 248
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 249 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 307
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 308 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 367
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 368 gctgcatgtcnatcttgccgaagaggtactcntgcttggactggaacccggagccgga 425
>gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001D16f, mRNA sequence
Length = 844
Score = 452 bits (228), Expect = e-126
Identities = 373/418 (89%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| ||||
Sbjct: 626 ccagtcgtcggcgttccagaggctggagtagagccgcat-ggctgggtcttggggnacgc 568
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 567 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 508
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 507 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 448
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 447 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 388
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 387 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 329
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 328 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 269
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 268 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 211
>gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04P11u 5', mRNA sequence
Length = 638
Score = 444 bits (224), Expect = e-123
Identities = 372/418 (88%), Gaps = 3/418 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | | |||||||||||||||| ||||| ||||||| |||||
Sbjct: 628 ccagtcgtcggcgttccagaggttggagtagagcngcatgggctggttcttggggaacgc 569
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | | || | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 568 gatcccnttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 509
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 508 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 449
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || || |||||| |||||||||||||||||||||||||
Sbjct: 448 gaggcggaactgttgctcccgttggccttgcccctgcgtgaacacgttggtgtgcagcgt 389
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 388 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 330
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgca 410
||||||||||||||||||||||||| ||||||||||| |||||||| || || ||| |
Sbjct: 329 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttga 270
Query: 411 gctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 269 gctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 212
>gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36L09
5-PRIME, mRNA sequence
Length = 589
Score = 440 bits (222), Expect = e-122
Identities = 374/422 (88%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 584 gcatgtcgtccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtgga 525
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
| ||| |||||| |||||||||||||| |||||||||||||| || || |||||| |||
Sbjct: 524 aatcgttggtgggatcgaaccagaggcgaaactgctgctcccgttggccttgcccctgcg 465
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 464 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 405
Query: 330 cgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
||||||||||||||| || | |||||||||||||||||||| |||||||||||||||||
Sbjct: 404 cgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtatgcggtgacggtgccggca 346
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || || ||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 345 gagttgccggggacgagcttgagctgcatgtcgatcttgccgaagaggtactcgtgcttg 286
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
||||||||||||||||||||| |||||||| ||||||||| ||| | || ||||
Sbjct: 285 gactggaacccggagccggacaccttgtccagcgccagcgtcaggagctgaccattgttc 226
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggtccaagctgcccgcc 568
|||| |||||| |||||||||||||| |||||||| | ||||| ||| ||||| |||||
Sbjct: 225 aggatcttgccacgcccgtcgccccaggtgatgtcgaactccttgtcgaagctcgccgcc 166
Query: 569 gc 570
||
Sbjct: 165 gc 164
>gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06L16r 3', mRNA sequence
Length = 700
Score = 426 bits (215), Expect = e-118
Identities = 369/421 (87%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| | | ||||||||| ||| |||| ||||| ||||||| |
Sbjct: 151 tcgcccagtcgtcggcgttccagaggctggagtacagccgcataggctggttcttgggga 210
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
| || | | |||| | ||||| ||| | |||||||||||| |||||||||| |||| ||
Sbjct: 211 aggcgatcccctttccctccatgttcctgaagtccctgatcggcatgtcgtcaaccaaga 270
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
|||||| |||||| ||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 271 agatgatgtgcttcgggttccagaggatggagtaggtgtggaagtcgttggtaggatcga 330
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 331 accagaggcggaactgctgctcccgctggccctgcccctgcgtgaacacgttggtgtgca 390
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcgtgtatggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcg 450
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
||||||||||||||||| || |||||||||||||||||||||||||| || || |||
Sbjct: 451 gaccctgcgacgacaggtaatatgcggtgacggtgccggcggagttgccggggacgagct 510
Query: 408 gcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgg 467
||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 511 tgagctgcatgtcgatcttgccgaagaggtactcgcgcttggactggaacccggagccgg 570
Query: 468 a 468
|
Sbjct: 571 a 571
>gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F05 5', mRNA sequence
Length = 601
Score = 426 bits (215), Expect = e-118
Identities = 369/421 (87%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| | | ||||||||| ||| |||| ||||| ||||||| |
Sbjct: 598 tcgcccagtcgtcggcgttccagaggctggagtacagccgcataggctggttcttgggga 539
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
| || | | |||| | ||||| ||| | |||||||||||| |||||||||| |||| ||
Sbjct: 538 aggcgatcccctttccctccatgttcctgaagtccctgatcggcatgtcgtcaaccaaga 479
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
|||||| |||||| ||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 478 agatgatgtgcttcgggttccagaggatggagtaggtgtggaagtcgttggtaggatcga 419
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 418 accagaggcggaactgctgctcccgctggccctgcccctgcgtgaacacgttggtgtgca 359
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcgtgtatggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcg 299
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
||||||||||||||||| || |||||||||||||||||||||||||| || || |||
Sbjct: 298 gaccctgcgacgacaggtaatatgcggtgacggtgccggcggagttgccggggacgagct 239
Query: 408 gcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgg 467
||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 238 tgagctgcatgtcgatcttgccgaagaggtactcgcgcttggactggaacccggagccgg 179
Query: 468 a 468
|
Sbjct: 178 a 178
>gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI02H24
5-PRIME, mRNA sequence
Length = 538
Score = 420 bits (212), Expect = e-116
Identities = 295/320 (92%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 531 gcatgtcgtccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtgga 472
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
||||| |||||| |||||||||||||||||||| |||||||| || ||||||||| |||
Sbjct: 471 agtcgttggtgggatcgaaccagaggcggaactgttgctcccgttggccctgcccctgcg 412
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 411 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 352
Query: 330 cgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||
Sbjct: 351 cgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtaggcggttacggtgccggca 293
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || || ||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 292 gagttgccggggacgagcttgagctgcatgtcgatcttgccgaagaggtactcgtgcttg 233
Query: 449 gactggaacccggagccgga 468
||||||||||||||||||||
Sbjct: 232 gactggaacccggagccgga 213
>gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_H24 5', mRNA sequence
Length = 525
Score = 420 bits (212), Expect = e-116
Identities = 295/320 (92%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 520 gcatgtcgtccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtgga 461
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
||||| |||||| |||||||||||||||||||| |||||||| || ||||||||| |||
Sbjct: 460 agtcgttggtgggatcgaaccagaggcggaactgttgctcccgttggccctgcccctgcg 401
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 400 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 341
Query: 330 cgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||
Sbjct: 340 cgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtaggcggttacggtgccggca 282
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || || ||| ||||||||||||||||||||||| |||||||||||| |
Sbjct: 281 gagttgccggggacgagcttgagctgcatgtcgatcttgccgaagaggtactcgtgcttg 222
Query: 449 gactggaacccggagccgga 468
||||||||||||||||||||
Sbjct: 221 gactggaacccggagccgga 202
>gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015H17f, mRNA sequence
Length = 768
Score = 418 bits (211), Expect = e-115
Identities = 368/421 (87%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| |||||||| |||||| | | ||||||||| ||| |||| ||||| ||||||| |
Sbjct: 544 tcgcccagtcgttggcgttccagaggctggagtacagccgcataggctggttcttgggga 485
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
| || | | |||| | ||||| ||| | |||||||||||| |||||||||| |||| ||
Sbjct: 484 aggcgatcccctttccctccatgttcctgaagtccctgatcggcatgtcgtcaaccaaga 425
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
|||||| |||||| ||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 424 agatgatgtgcttcgggttccagaggatggagtaggtgtggaagtcgttggtaggatcga 365
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 364 accagaggcggaactgctgctcccgctggccctgcccctgcgtgaacacgttggtgtgca 305
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 304 gcgtgtatggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcg 245
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
||||||||||||||||| || |||||||||||||||||||||||||| || || |||
Sbjct: 244 gaccctgcgacgacaggtaatatgcggtgacggtgccggcggagttgccggggacgagct 185
Query: 408 gcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgg 467
||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 184 tgagctgcatgtcgatcttgccgaagaggtactcgcgcttggactggaacccggagccgg 125
Query: 468 a 468
|
Sbjct: 124 a 124
>gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI08H24
5-PRIME, mRNA sequence
Length = 490
Score = 418 bits (211), Expect = e-115
Identities = 371/422 (87%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
Sbjct: 483 gcatgtcgtccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtgna 424
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
| ||| |||||| |||||||||||||| |||||||||||||| || || |||||| |||
Sbjct: 423 aatcgttggtgggatcgaaccagaggcgaaactgctgctcccgttggccttgcccctgcg 364
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 363 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 304
Query: 330 cgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
||||||||||||||| || | |||||||||||||||||||| |||||||||||||||||
Sbjct: 303 cgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtatgcggtgacggtgccggca 245
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || || ||| |||||||||||||||||||| || |||||||||||| |
Sbjct: 244 gagttgccggggacgagcttgagctgcatgtcgatcttgcccaagaggtactcgtgcttg 185
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
|||||||||||||||||| || |||||||| ||||||||| ||| | || ||||
Sbjct: 184 gactggaacccggagccgaacaccttgtccagcgccagcgtcaggagctgaccattgttc 125
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggtccaagctgcccgcc 568
|||| |||||| |||||||||||||| |||||||| | ||||| ||| ||||| |||||
Sbjct: 124 aggatcttgccacgcccgtcgccccaggtgatgtcgaactccttgtcgaagctcgccgcc 65
Query: 569 gc 570
||
Sbjct: 64 gc 63
>gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P23 5', mRNA sequence
Length = 537
Score = 410 bits (207), Expect = e-113
Identities = 291/319 (91%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
||||||| ||| |||||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 530 gcatgtcatccgccatgaagatgatgtgctttgggttccaaaggatggagtaggtgtgga 471
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 470 agtcgttggtgggatcgaaccagaggcggaactgctgctcccgctggccctgcccctgcg 411
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 410 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 351
Query: 330 cgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcgg 389
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 350 cgatctcgtcgtgcgtaggaccctgcgacgacaggtagtaggcggttacggtgccggcgg 291
Query: 390 agttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccggg 449
||||||| || || ||| || |||||||||||||||||||| |||||||||||| ||
Sbjct: 290 agttgccggggacgagcttgagttgcatgtcgatcttgccgaagaggtactcgtgcttgg 231
Query: 450 actggaacccggagccgga 468
|||||||||||||||||||
Sbjct: 230 actggaacccggagccgga 212
>gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_A06 5', mRNA sequence
Length = 634
Score = 410 bits (207), Expect = e-113
Identities = 310/345 (89%)
Strand = Plus / Minus
Query: 124 ctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggg 183
||||| ||| | |||||||||||| |||||||||| |||| |||||||| |||||| ||
Sbjct: 600 ctccatgttcctgaagtccctgatcggcatgtcgtcaaccaagaagatgatgtgcttcgg 541
Query: 184 gttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactg 243
||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 540 gttccagaggatggagtaggtgtggaagtcgttggtaggatcgaaccagaggcggaactg 481
Query: 244 ctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgcc 303
|||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 480 ctgctcccgctggccctgcccctgcgtgaacacgttggtgtgcagcgtgtatggctcgcc 421
Query: 304 ggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacag 363
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 420 ggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggaccctgcgacgacag 361
Query: 364 gtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgat 423
||| || |||||||||||||||||||||||||| || || ||| ||||||||||||||
Sbjct: 360 gtaatatgcggtgacggtgccggcggagttgccggggacgagcttgagctgcatgtcgat 301
Query: 424 cttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 300 cttgccgaagaggtactcgcgcttggactggaacccggagccgga 256
>gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49H21
5-PRIME, mRNA sequence
Length = 562
Score = 398 bits (201), Expect = e-109
Identities = 350/397 (88%), Gaps = 2/397 (0%)
Strand = Plus / Minus
Query: 175 gtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagag 234
|||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||
Sbjct: 562 gtgctttgggttccagaggatggagtaggtgtggaaatcgttggtgggatcgaaccagag 503
Query: 235 gcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgta 294
||| |||||||||||||| || || |||||| ||||||||||||||||||||||||||||
Sbjct: 502 gcgaaactgctgctcccgttggccttgcccctgcgtgaacacgttggtgtgcagcgtgta 443
Query: 295 gggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgccct 353
||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 442 gggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-ccct 384
Query: 354 gcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagct 413
|||||||||||||||| ||||||||||||||||| |||||||| || || ||| ||||
Sbjct: 383 gcgacgacaggtagtatgcggtgacggtgccggcagagttgccggggacgagcttgagct 324
Query: 414 gcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgc 473
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 323 gcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccggacacct 264
Query: 474 ggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgcccc 533
|||||||| ||||||||| ||| | || |||| |||| |||||| |||||||||||||
Sbjct: 263 tgtccagcgccagcgtcaggagctgaccattgttcaggatcttgccacgcccgtcgcccc 204
Query: 534 acgtgatgtccagctcctggtccaagctgcccgccgc 570
| |||||||| | ||||| ||| ||||| |||||||
Sbjct: 203 aggtgatgtcgaactccttgtcgaagctcgccgccgc 167
>gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03J06u 5', mRNA sequence
Length = 529
Score = 396 bits (200), Expect = e-109
Identities = 285/311 (91%), Gaps = 2/311 (0%)
Strand = Plus / Minus
Query: 159 ccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcgg 218
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 515 ccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtggaagtcgttgg 456
Query: 219 tggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgt 278
||| |||||||||||||||||||| |||||||| || ||||||||| ||||||||||||
Sbjct: 455 tggnatcgaaccagaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgt 396
Query: 279 tggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgt 338
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 395 tggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgt 336
Query: 339 cgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgccc 397
|||||| || | |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 335 cgtgcgtcggc-ccctgcgacgacaggtagtaggcggttacggtgccggcagagttgccg 277
Query: 398 ggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaac 457
|| || ||| ||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 276 gggacgagcttgagctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaac 217
Query: 458 ccggagccgga 468
|||||||||||
Sbjct: 216 ccggagccgga 206
>gb|AL500119.1|AL500119 AL500119 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04P11r 3', mRNA sequence
Length = 501
Score = 394 bits (199), Expect = e-108
Identities = 311/346 (89%), Gaps = 3/346 (0%)
Strand = Plus / Plus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 9 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 68
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 69 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 128
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 129 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 188
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 189 gaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgt 248
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 249 gtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-c 307
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcc 396
||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 308 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgcc 353
>gb|AL500052.1|AL500052 AL500052 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04L04r 3', mRNA sequence
Length = 523
Score = 387 bits (195), Expect = e-106
Identities = 364/414 (87%), Gaps = 6/414 (1%)
Strand = Plus / Plus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 9 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 68
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 69 gatccccttcccctccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 128
Query: 172 gacgtgcttggggttcca-gaggatggagtaggtgtggaagtcggcggtggggt-cgaac 229
|| |||||| |||||||| ||||||||||||||||||||||||| |||||| | | |||
Sbjct: 129 gatgtgctttgggttccaagaggatggagtaggtgtggaagtcgttggtgggattcaaac 188
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgt-gaacacgttggtgtgcag 288
| ||||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||
Sbjct: 189 aaaaggcggaactgttgctcccgttggccctgcccctgcgttgaacacgttggtgtgcag 248
Query: 289 cgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgc 347
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 249 cgtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcgg 308
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
| |||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 309 c-ccctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagct 367
Query: 408 gcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccgg 461
||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 368 tgagctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccgg 421
>gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003O02f, mRNA sequence
Length = 507
Score = 381 bits (192), Expect = e-104
Identities = 275/300 (91%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
|||| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 506 atgatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaac 447
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 446 cagaggcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagc 387
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgcc 348
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct: 386 gtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc 327
Query: 349 gccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccg 408
|||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 326 -ccctgcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagctt 268
Query: 409 cagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 267 gagctgcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 208
>gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59J16
5-PRIME, mRNA sequence
Length = 329
Score = 381 bits (192), Expect = e-104
Identities = 278/307 (90%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| |||||||||| |||| |||||||| |||||| ||||||||||||||
Sbjct: 323 gaagtccctgatcggcatgtcgtcaaccaagaagatgatgtgcttcgggttccagaggat 264
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct: 263 ggagtaggtgtggaagtcgttggtaggatcgaaccagaggcggaactgctgctcccgctg 204
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 203 gccctgcccctgcgtgaacacgttggtgtgcagcgtgtatggctcgccggtgacgttgcc 144
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
||||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 143 caggaactcgaagtcgatctcgtcgtgcgtcggaccctgcgacgacaggtaatatgcggt 84
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| ||||||||||||||||||||||| ||
Sbjct: 83 gacggtgccggcggagttgccggggacgagcttgagctgcatgtcgatcttgccgaagag 24
Query: 436 gtactcg 442
|||||||
Sbjct: 23 gtactcg 17
>gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007F19f, mRNA sequence
Length = 499
Score = 371 bits (187), Expect = e-101
Identities = 270/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 175 gtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagag 234
|||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 496 gtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaaccagag 437
Query: 235 gcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgta 294
||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||
Sbjct: 436 gcggaactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgtgta 377
Query: 295 gggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgccct 353
||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 376 gggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-ccct 318
Query: 354 gcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagct 413
|||||||||||||||||||||| ||||||||||| |||||||| || || ||| ||||
Sbjct: 317 gcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttgagct 258
Query: 414 gcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||||||||||| |||||||||||| ||||||||||| |||||||||
Sbjct: 257 gcatgtcgatcttgccgaagaggtactcgtgcttggactggaaccgggagccgga 203
>gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013G22f, mRNA sequence
Length = 466
Score = 371 bits (187), Expect = e-101
Identities = 308/346 (89%), Gaps = 3/346 (0%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-aacgc 111
||||||||| |||||| | | ||||||||||||| |||| ||||| ||||||| |||||
Sbjct: 457 ccagtcgtcggcgttccagaggctggagtagagccgcatgggctggttcttggggaacgc 398
Query: 112 aaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaagat 171
| | |||| | |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 397 gatccccttcccttccaggttcttgaagtccctgatcggcatgtcgtccaccatgaagat 338
Query: 172 gacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaacca 231
|| |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 337 gatgtgctttgggttccagaggatggagtaggtgtggaagtcgttggtgggatcgaacca 278
Query: 232 gaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgt 291
|||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 277 gaggcggaactgttgctcccgttggccctgcccatgcgtgaacacgttggtgtgcagcgt 218
Query: 292 gtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgc 350
|||||||||||||| |||||||||||||||| |||||||||||||||||||| || | |
Sbjct: 217 gtagggctcgccggtgacgttgcccaggaactggaagtcgatctcgtcgtgcgtcggc-c 159
Query: 351 cctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcc 396
||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 158 cctgcgacgacaggtagtaggcggttacggtgccggcagagttgcc 113
>gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I16f, mRNA sequence
Length = 673
Score = 371 bits (187), Expect = e-101
Identities = 301/334 (90%), Gaps = 4/334 (1%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| |||||||||||||||||||||||| ||| ||||| | |||||||||
Sbjct: 534 gaagtccctgatcggcatgtcgtccaccatgaagatgatgtgtttggg-tcccagaggat 476
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||| |||||| ||||| |||||||||||||||||||| |||||| | ||
Sbjct: 475 ggagtaggtgtgaaagtcgttggtgga-tcgaaccagaggcggaactgttgctccggttg 417
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 416 gccttgcccctgcgtgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 357
Query: 316 caggaactcgaagtcgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcgg 374
||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 356 caggaactcgaagtcgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtaggcgg 298
Query: 375 tgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaaca 434
| ||||||||||| |||||||| || || ||| ||||||||||||||||||||||| |
Sbjct: 297 ttacggtgccggcagagttgccggggacgagcttgagctgcatgtcgatcttgccgaaga 238
Query: 435 ggtactcgtgccgggactggaacccggagccgga 468
||||||||||| |||||||||||||||||||||
Sbjct: 237 ggtactcgtgcttggactggaacccggagccgga 204
>gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090G19f, mRNA sequence
Length = 921
Score = 371 bits (187), Expect = e-101
Identities = 296/333 (88%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
||||||| |||| ||||||| ||| |||||||||||| ||| || |||||| | || ||
Sbjct: 542 gaagtccgtgatcggcatgtcatcccccatgaagatgatgtgttttgggttcaaaagaat 483
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
| |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 482 gcagtaggtgtgaaagtcgttggtgggatcgaaccagaggcggaactgctgctcccgctg 423
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 422 gccctgcccntgcgtgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 363
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 362 caggaactcgaagtcgatctcgtcgtgcgtaggaccctgcgacgacaggtagtaggcggt 303
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
|||||||||||||||||||| || || ||| || |||||||||||||||||||| ||
Sbjct: 302 tacggtgccggcggagttgccggggacgagcttgagttgcatgtcgatcttgccgaagag 243
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
|||||||||| |||||||||||||||||||||
Sbjct: 242 gtactcgtgcttggactggaacccggagccgga 210
>gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006G01f, mRNA sequence
Length = 557
Score = 369 bits (186), Expect = e-101
Identities = 299/333 (89%), Gaps = 3/333 (0%)
Strand = Plus / Minus
Query: 137 aagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatg 196
||||||||||| |||||||||||||||| ||||||| ||| ||||| ||||| || |||
Sbjct: 537 aagtccctgatcggcatgtcgtccaccataaagatgatgtgtttggg-ttccaaagaatg 479
Query: 197 gagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgc 256
|||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 478 gagtaggtgtggaagtcgttggtggattcgaaccagaggcgaaactgttgctcccgttgg 419
Query: 257 ccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgccc 316
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 418 ccctgcccatgcgtgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgccc 359
Query: 317 aggaactcgaagtcgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||
Sbjct: 358 aggaactcgaagtcgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtaggcggt 300
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||| |||||||| || || ||| ||||||||||||||||||||||| ||
Sbjct: 299 tacggtgccggcagagttgccggggacgagcttgagctgcatgtcgatcttgccgaagag 240
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
|||||||||| |||||||||||||||||||||
Sbjct: 239 gtactcgtgcttggactggaacccggagccgga 207
>gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010F24f, mRNA sequence
Length = 737
Score = 365 bits (184), Expect = 1e-099
Identities = 288/320 (90%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 150 gcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgga 209
|||||| ||||||||| || || | |||||| |||||||| || ||||||||||||||||
Sbjct: 513 gcatgtggtccaccataaaaataatgtgctttgggttccaaagaatggagtaggtgtgga 454
Query: 210 agtcggcggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcg 269
||||| |||||| |||||||||||||| ||||| |||||||| || ||||||||| |||
Sbjct: 453 agtcgttggtgggatcgaaccagaggcgcaactgttgctcccgttggccctgcccctgcg 394
Query: 270 tgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagt 329
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 393 tgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagt 334
Query: 330 cgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||
Sbjct: 333 cgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtaggcggttacggtgccggca 275
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || || ||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 274 gagttgccggggacgagcttgagctgcatgtcgatcttgccgaacaggtactcgtgcttg 215
Query: 449 gactggaacccggagccgga 468
|| |||||||||||||||||
Sbjct: 214 gattggaacccggagccgga 195
>gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. vulgare cDNA clone HS04B01
5-PRIME, mRNA sequence
Length = 665
Score = 361 bits (182), Expect = 2e-098
Identities = 295/333 (88%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 593 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 534
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 474
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 473 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 414
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 413 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 354
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 353 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 294
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 293 gtactcgctcttggactggaagccggagccgga 261
>gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. vulgare cDNA clone HI08L09
5-PRIME, mRNA sequence
Length = 583
Score = 361 bits (182), Expect = 2e-098
Identities = 295/333 (88%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 583 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 524
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 464
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 463 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 404
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 403 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 344
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 343 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 284
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 283 gtactcgctcttggactggaagccggagccgga 251
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEB)
Length = 1226
Score = 361 bits (182), Expect = 2e-098
Identities = 295/333 (88%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 598 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 539
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 479
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 478 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 419
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 418 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 359
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 358 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 299
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 298 gtactcgctcttggactggaagccggagccgga 266
Score = 50.1 bits (25), Expect = 1e-004
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg 106
||||||||| |||||| ||| ||| | ||| ||| ||||| |||||||||||||
Sbjct: 682 ccagtcgtcggcgttccacaggctcgcgtacagccgcatcggctggctcttggg 629
>gb|AW982755.3|AW982755 HVSMEg0004C03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004C03f, mRNA sequence
Length = 556
Score = 357 bits (180), Expect = 3e-097
Identities = 304/346 (87%), Gaps = 1/346 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| | | ||||||||| ||| |||| ||||| ||||||| |
Sbjct: 346 tcgcccagtcgtcggcgttccagaggctggagtacagccgcataggctggttcttgggga 287
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
| || | | |||| | ||||| ||| | |||||||||||| |||||||||| |||| ||
Sbjct: 286 aggcgatcccctttccctccatgttcctgaagtccctgatcggcatgtcgtcaaccaaga 227
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
|||||| |||||| ||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 226 agatgatgtgcttcgggttccagaggatggagtaggtgtggaagtcgttggtaggatcga 167
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 166 accagaggcggaactgctgctcccgctggccctgcccctgcgtgaacacgttggtgtgca 107
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 106 gcgtgtatggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcg 47
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagtt 393
||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 46 gaccctgcgacgacaggtaatatgcggtgacggtgccggcggagtt 1
>gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. vulgare cDNA clone HR01J18
5-PRIME, mRNA sequence
Length = 575
Score = 355 bits (179), Expect = 1e-096
Identities = 269/299 (89%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
|||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 572 atgacgtgctgcgggttccagatgatggagtaggtgtggaaggccttggtggggtcgaac 513
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 512 cagaggcggaactgctgctcccgctgcccctgcccctgcgcgaacacgttggtgtgcagc 453
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgccgtc 393
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||| ||| |||||||||||||||||||||||| || || |||
Sbjct: 392 ccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgccggggacgagcttg 333
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 332 atctgcatgtcgatcttgccgaagaggtactcgctcttggactggaagccggagccgga 274
>gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. vulgare cDNA clone HI09H06
5-PRIME, mRNA sequence
Length = 551
Score = 355 bits (179), Expect = 1e-096
Identities = 269/299 (89%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
|||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 549 atgacgtgctgcgggttccagatgatggagtaggtgtggaaggccttggtggggtcgaac 490
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 489 cagaggcggaactgctgctcccgctgcccctgcccctgcgcgaacacgttggtgtgcagc 430
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgccgtc 370
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||| ||| |||||||||||||||||||||||| || || |||
Sbjct: 369 ccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgccggggacgagcttg 310
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 309 atctgcatgtcgatcttgccgaagaggtactcgctcttggactggaagccggagccgga 251
>gb|CB877507.1|CB877507 HP05D02T HP Hordeum vulgare subsp. vulgare cDNA clone HP05D02
5-PRIME, mRNA sequence
Length = 632
Score = 355 bits (179), Expect = 1e-096
Identities = 334/382 (87%), Gaps = 5/382 (1%)
Strand = Plus / Minus
Query: 19 ggaccagtccgtcttna-gngcccgccct-cntcgnccagtcgtccgcgttcaacangct 76
||||||||||||||| | | | ||||||| | | | ||||||||| |||||| | | |||
Sbjct: 407 ggaccagtccgtcttgacgcggccgccctgcgttgcccagtcgtcggcgttccagaggct 348
Query: 77 ggagtagagcngcatcngctggctctt-gggaacgcaaccaccttgctctccaggttgcn 135
|||||||||| |||| ||||| |||| ||||| || | | | || | |||||||||
Sbjct: 347 ggagtagagccgcatgggctggttcttggggaaggcgatcccttttccctccaggttctt 288
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 287 gaagtctctgatcggcatgtcgtccaccatgaagatgatgtgctttgggttccagaggat 228
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||| ||
Sbjct: 227 ggagtaggtgtggaaatcgttggtgggatcgaaccagaggcgaaactgctgctcccgttg 168
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 167 gccttgcccctgcgtgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 108
Query: 316 caggaactcgaagtcgatctcgtcgtgcg-cgccgccctgcgacgacaggtagtaggcgg 374
||||||||||||||||||||||||||||| || | |||||||||||||||||||| ||||
Sbjct: 107 caggaactcgaagtcgatctcgtcgtgcgtcggc-ccctgcgacgacaggtagtatgcgg 49
Query: 375 tgacggtgccggcggagttgcc 396
||||||||||||| ||||||||
Sbjct: 48 tgacggtgccggcagagttgcc 27
>gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012J20f, mRNA sequence
Length = 621
Score = 353 bits (178), Expect = 5e-096
Identities = 294/333 (88%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 598 gaagtccctgatccccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 539
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 479
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 478 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttacc 419
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 418 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 359
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 358 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 299
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 298 gtactcgctcttggactggaagccggagccgga 266
>gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_G13 5', mRNA sequence
Length = 525
Score = 349 bits (176), Expect = 8e-095
Identities = 274/307 (89%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 314 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 255
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 195
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 194 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttgcc 135
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 134 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 75
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 74 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 15
Query: 436 gtactcg 442
|||||||
Sbjct: 14 gtactcg 8
Score = 50.1 bits (25), Expect = 1e-004
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg 106
||||||||| |||||| ||| ||| | ||| ||| ||||| |||||||||||||
Sbjct: 398 ccagtcgtcggcgttccacaggctcgcgtacagccgcatcggctggctcttggg 345
>gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06D17
5-PRIME, mRNA sequence
Length = 569
Score = 347 bits (175), Expect = 3e-094
Identities = 259/287 (90%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
|||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 561 gggttccagatgatggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaac 502
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 501 tgctgctcccgctgcccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcg 442
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgac 382
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| || || ||| | ||||||||||
Sbjct: 381 aggtagaaggtggtgacggtgccggcggagttgccggggacgagcttgatctgcatgtcg 322
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 321 atcttgccgaagaggtactcgctcttggactggaagccggagccgga 275
>gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J12f, mRNA sequence
Length = 729
Score = 345 bits (174), Expect = 1e-093
Identities = 293/333 (87%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 594 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 535
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 534 ggagtaggtgtggaaggccttggtggggtcgaaccagaggcggaactgttgctcccgctg 475
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 474 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgccggtgacgttacc 415
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 414 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 355
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 354 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 295
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 294 gtactcgctcttggactggaagccggagccgga 262
Score = 50.1 bits (25), Expect = 1e-004
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg 106
||||||||| |||||| ||| ||| | ||| ||| ||||| |||||||||||||
Sbjct: 678 ccagtcgtcggcgttccacaggctcgcgtacagccgcatcggctggctcttggg 625
>gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009G06f, mRNA sequence
Length = 798
Score = 341 bits (172), Expect = 2e-092
Identities = 265/296 (89%)
Strand = Plus / Minus
Query: 173 acgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccag 232
||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct: 568 acgtgctgcgggttccagatgatggagtaggtgtggaaggccttggtggggtcgaaccag 509
Query: 233 aggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtg 292
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 508 aggcggaactgctgctcccgctgcccctgcccctgcgcgaacacgttggtgtgcagcgtg 449
Query: 293 tagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccc 352
||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 448 tagggctcgccggtgacgttacccaggaactcgaagtcgatctcgtcgtgcgccgtcccc 389
Query: 353 tgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagc 412
||||||||||||||| ||| |||||||||||||||||||||||| || || ||| | |
Sbjct: 388 tgcgacgacaggtagaaggtggtgacggtgccggcggagttgccggggacgagcttgatc 329
Query: 413 tgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 328 tgcatgtcgatcttgccgaagaggtactcgctcttggactggaagccggagccgga 273
>gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K21
5-PRIME, mRNA sequence
Length = 574
Score = 341 bits (172), Expect = 2e-092
Identities = 258/287 (89%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
|||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct: 566 gggttccagatgatggagtaggtgtggaaggccttggtgnggtcgaaccagaggcggaac 507
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 506 tgctgctcccgctgcccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcg 447
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 446 ccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgac 387
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| || || ||| | ||||||||||
Sbjct: 386 aggtagaaggtggtgacggtgccggcggagttgccggggacgagcttgatctgcatgtcg 327
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 326 atcttgccgaagaggtactcgctcttggactggaagccggagccgga 280
>gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025G09f, mRNA sequence
Length = 690
Score = 333 bits (168), Expect = 5e-090
Identities = 266/299 (88%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
|||||||||| |||||||||| ||||||||||||||| ||| | |||||||||||||
Sbjct: 576 atgacgtgctgcgggttccagatgatggagtaggtgtgnaaggccttggtggggtcgaac 517
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 516 cagaggcggaactgctgctcccgctgcccctgcccatgcgcgaacacgttggtgtgcagc 457
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 456 gtgtagggctcgccggtgacgttacccaggaactcgaagtcgatctcgtcgtgcgccgtc 397
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||| ||| |||||||||||||||||||||||| || || |||
Sbjct: 396 ccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgccggggacgagcttg 337
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 336 atctgcatgtcgatcttgccgaagaggtactcgctcttggactggaagccggagccgga 278
>gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F18f, mRNA sequence
Length = 798
Score = 323 bits (163), Expect = 5e-087
Identities = 265/299 (88%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
|||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 573 atgacgtgctgcgggttccagatgatggagtaggtgtggaaggccttggtggggtcgaac 514
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||
Sbjct: 513 cagaggcggaactgctgctcccgctgcccttgcccctgcggaaacacgttggtgtgcagc 454
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 453 gtgtagggctcgccggtgacgttacccaggaactcgaagtcgatctcgtcgtgcgccgtc 394
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||| ||| |||||||||||||||||||||||| || || |||
Sbjct: 393 ccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgccggggacgagcttg 334
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | |||||| || |||||||||||
Sbjct: 333 atctgcatgtcgatcttgccgaagaggtactcgctcttggactgaaagccggagccgga 275
>gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. vulgare cDNA clone HI01G12
5-PRIME, mRNA sequence
Length = 486
Score = 317 bits (160), Expect = 3e-085
Identities = 229/252 (90%)
Strand = Plus / Minus
Query: 217 ggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacac 276
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 486 ggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccctgcgcgaacac 427
Query: 277 gttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctc 336
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 426 gttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatctc 367
Query: 337 gtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcc 396
||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 366 gtcgtgcgccgtcccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgcc 307
Query: 397 cggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaa 456
|| || ||| | ||||||||||||||||||||| ||||||||| | |||||||||
Sbjct: 306 ggggacgagcttgatctgcatgtcgatcttgccgaagaggtactcgctcttggactggaa 247
Query: 457 cccggagccgga 468
|||||||||||
Sbjct: 246 gccggagccgga 235
>gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001P03f, mRNA sequence
Length = 790
Score = 307 bits (155), Expect = 3e-082
Identities = 307/355 (86%), Gaps = 2/355 (0%)
Strand = Plus / Minus
Query: 217 ggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacac 276
|||||| ||||||||||| |||||| |||||||| || || |||||| | ||||||||
Sbjct: 501 ggtgggatcgaaccagagcgagaactgttgctcccgttggccttgcccctgagtgaacac 442
Query: 277 gttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctc 336
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 gttggtgtgcagcgtgtagggctcgccggtaacgttgcccaggaactcgaagtcgatctc 382
Query: 337 gtcgtgcg-cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgc 395
|||||||| || | || ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 381 gtcgtgcgtcggc-ccttgcgacgacaggtagtatgcggtgacggtgccggcagagttgc 323
Query: 396 ccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactgga 455
| || || ||| ||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 322 cggggacgagcttgagctgcatgtcgatcttgccgaagaggtactcgtgcttggactgga 263
Query: 456 acccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggacct 515
|||||||||||||| |||||||| ||||||||| ||| | || |||| |||| ||
Sbjct: 262 acccggagccggacaccttgtccagcgccagcgtcaggagctgaccattgttcaggatct 203
Query: 516 tgccccgcccgtcgccccacgtgatgtccagctcctggtccaagctgcccgccgc 570
|||| |||||||||||||| |||||||| | ||||| ||| ||||| |||||||
Sbjct: 202 tgccacgcccgtcgccccaggtgatgtcgaactccttgtcgaagctcgccgccgc 148
>gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005I10f, mRNA sequence
Length = 804
Score = 307 bits (155), Expect = 3e-082
Identities = 262/295 (88%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 175 gtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagag 234
|||||| |||||||| || ||| || ||||||| ||||| ||||| |||||||| ||
Sbjct: 336 gtgctttgggttccacagcatgcagcaggtgtgctagtcgttggtggcatcgaaccacag 277
Query: 235 gcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgta 294
|||| |||| |||||||| || ||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 gcggtactgttgctcccgttggccctgcccctgcgtgaacacgttggtgtgcagcgtgta 217
Query: 295 gggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg-cgccgccct 353
||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 216 gggctcgccggtgacgttgcccaggaactcgaagtcgatctcgtcgtgcgtcggc-ccct 158
Query: 354 gcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagct 413
|||||||||||||||||||||| ||||||||||| |||||||| || || ||| ||||
Sbjct: 157 gcgacgacaggtagtaggcggttacggtgccggcagagttgccggggacgagcttgagct 98
Query: 414 gcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 97 gcatgtcgatcttgccgaagaggtactcgtgcttggactggaacccggagccgga 43
>gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N10f, mRNA sequence
Length = 801
Score = 307 bits (155), Expect = 3e-082
Identities = 288/333 (86%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| | || |||||||| ||| |||||||||| |||||||||| |||
Sbjct: 593 gaagtccctgatcgccgtgccgtccaccgcgaatatgacgtgctgcgggttccagatgat 534
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gagtnaggtgtggaaggccttggtggggtcgaaccagaggcggaactgctgctcccgctg 474
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
|||||||||| ||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 473 cccctgcccctgcgcgaacacgttggtgtgcagcgtgtagggctcgcgggtgacgttacc 414
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 413 caggaactcgaagtcgatctcgtcgtgcgccgtcccctgcgacgacaggtagaaggtggt 354
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
||||||||||||||||||||| || || ||| | ||||||||||||||||||||| ||
Sbjct: 353 gacggtgccggcggagttgccggggacgagcttgatctgcatgtcgatcttgccgaagag 294
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | |||||| || |||||||||||
Sbjct: 293 gtactcgctcttggactgaaagccggagccgga 261
Score = 50.1 bits (25), Expect = 1e-004
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 53 ccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg 106
||||||||| |||||| ||| ||| | ||| ||| ||||| |||||||||||||
Sbjct: 677 ccagtcgtcggcgttccacaggctcgcgtacagccgcatcggctggctcttggg 624
>gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03A15T 5', mRNA sequence
Length = 520
Score = 303 bits (153), Expect = 4e-081
Identities = 229/253 (90%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 217 ggtggggtcgaaccagaggcggaactgct-gctcccgctgcccctgcccccgcgtgaaca 275
||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 504 ggtggggtcgaaccagaggcggaactgcttgctcccgctgcccctgcccctgcgcgaaca 445
Query: 276 cgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatct 335
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 cgttggtgtgcagcgtgtagggctcgccggtgacgttgcccaggaactcgaagtcgatct 385
Query: 336 cgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgc 395
|||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 384 cgtcgtgcgccgtcccctgcgacgacaggtagaaggtggtgacggtgccggcggagttgc 325
Query: 396 ccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactgga 455
| || || ||| | ||||||||||||||||||||| ||||||||| | ||||||||
Sbjct: 324 cggggacgagcttgatctgcatgtcgatcttgccgaagaggtactcgctcttggactgga 265
Query: 456 acccggagccgga 468
| |||||||||||
Sbjct: 264 agccggagccgga 252
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 108,917
Number of Sequences: 312970
Number of extensions: 108917
Number of successful extensions: 30745
Number of sequences better than 0.5: 245
Number of HSP's better than 0.5 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30074
Number of HSP's gapped (non-prelim): 480
length of query: 757
length of database: 175,134,539
effective HSP length: 19
effective length of query: 738
effective length of database: 169,188,109
effective search space: 124860824442
effective search space used: 124860824442
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)