BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716450.2.1
(2214 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial alde... 1308 0.0
gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA li... 664 0.0
gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA li... 664 0.0
gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedl... 583 e-165
gb|BF266942.2|BF266942 HV_CEa0016I01f Hordeum vulgare seedl... 565 e-159
gb|BJ545003.1|BJ545003 BJ545003 K. Sato unpublished cDNA li... 561 e-158
gb|BJ545021.1|BJ545021 BJ545021 K. Sato unpublished cDNA li... 553 e-156
gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedl... 523 e-147
gb|BE060168.2|BE060168 HVSMEg0011C03f Hordeum vulgare pre-a... 507 e-142
gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. v... 505 e-141
gb|BF267689.2|BF267689 HV_CEa0018J22f Hordeum vulgare seedl... 494 e-138
gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare s... 490 e-136
gb|BJ447724.1|BJ447724 BJ447724 K. Sato unpublished cDNA li... 458 e-127
gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, n... 454 e-126
gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA li... 446 e-123
gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA li... 444 e-123
gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike... 436 e-120
gb|AU252380.1|AU252380 AU252380 salt-stressed barley root c... 436 e-120
gb|AU252384.1|AU252384 AU252384 salt-stressed barley root c... 436 e-120
gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA li... 416 e-114
gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA li... 412 e-113
gb|BG369080.2|BG369080 HVSMEi0021K10f Hordeum vulgare 20 DA... 400 e-110
gb|BE454594.2|BE454594 HVSMEh0094K18f Hordeum vulgare 5-45 ... 389 e-106
gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA li... 379 e-103
gb|BG343362.1|BG343362 HVSMEg0005I16f Hordeum vulgare pre-a... 377 e-102
gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-a... 369 e-100
gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA li... 363 2e-098
gb|BQ764784.1|BQ764784 EBca01_SQ004_L19_R carpel, pre-anthe... 363 2e-098
gb|AL503399.1|AL503399 AL503399 Hordeum vulgare Barke roots... 355 4e-096
gb|AV923498.1|AV923498 AV923498 K. Sato unpublished cDNA li... 345 4e-093
gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA li... 343 2e-092
gb|BJ464602.1|BJ464602 BJ464602 K. Sato unpublished cDNA li... 341 6e-092
gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. v... 333 1e-089
gb|AV916371.1|AV916371 AV916371 K. Sato unpublished cDNA li... 331 6e-089
gb|BF265725.2|BF265725 HV_CEa0013C18f Hordeum vulgare seedl... 327 9e-088
gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. v... 319 2e-085
gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. v... 319 2e-085
gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 ... 309 2e-082
gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA li... 307 8e-082
gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA li... 305 3e-081
gb|AL508406.1|AL508406 AL508406 Hordeum vulgare Barke devel... 287 8e-076
gb|AL508201.1|AL508201 AL508201 Hordeum vulgare Barke devel... 274 1e-071
gb|BI950769.1|BI950769 HVSMEl0023C05f Hordeum vulgare spike... 274 1e-071
gb|AV926388.1|AV926388 AV926388 K. Sato unpublished cDNA li... 266 3e-069
gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA li... 252 4e-065
gb|BG368642.2|BG368642 HVSMEi0020B04f Hordeum vulgare 20 DA... 228 6e-058
gb|BF626810.3|BF626810 HVSMEb0001G09f Hordeum vulgare seedl... 214 9e-054
gb|BQ739998.1|BQ739998 HC01D04 HC Hordeum vulgare subsp. vu... 214 9e-054
gb|BQ739999.1|BQ739999 HC01D06 HC Hordeum vulgare subsp. vu... 214 9e-054
gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedl... 210 1e-052
gb|BE214550.1|BE214550 HV_CEb0003M11f Hordeum vulgare seedl... 200 1e-049
gb|BF255484.3|BF255484 HVSMEf0006P19f Hordeum vulgare seedl... 192 3e-047
gb|BQ463802.1|BQ463802 HG01H17r HG Hordeum vulgare subsp. v... 182 3e-044
gb|BQ659983.1|BQ659983 HG01H17u HG Hordeum vulgare subsp. v... 178 5e-043
gb|CD663937.1|CD663937 UCRHV18_07af09_b1 Drought-stressed D... 161 1e-037
gb|CA016131.1|CA016131 HV10E09u HV Hordeum vulgare subsp. v... 153 3e-035
gb|BJ472635.1|BJ472635 BJ472635 K. Sato unpublished cDNA li... 145 7e-033
gb|CA028024.1|CA028024 HZ60M07r HZ Hordeum vulgare subsp. v... 137 2e-030
gb|CA022428.1|CA022428 HZ43C10r HZ Hordeum vulgare subsp. v... 115 6e-024
gb|AV934953.1|AV934953 AV934953 K. Sato unpublished cDNA li... 109 4e-022
gb|BI955950.1|BI955950 HVSMEm0025C17f Hordeum vulgare green... 107 2e-021
gb|CA026842.1|CA026842 HZ57C03r HZ Hordeum vulgare subsp. v... 101 1e-019
gb|BJ473170.1|BJ473170 BJ473170 K. Sato unpublished cDNA li... 76 6e-012
gb|AV927943.1|AV927943 AV927943 K. Sato unpublished cDNA li... 70 3e-010
gb|CB880832.1|CB880832 HM07P12w HM Hordeum vulgare subsp. v... 70 3e-010
gb|BF255946.2|BF255946 HVSMEf0008E14f Hordeum vulgare seedl... 60 3e-007
gb|BM441484.2|BM441484 EBma05_SQ004_I07_R maternal, 12 DPA,... 40 0.31
>dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde dehydrogenase ALDH2,
complete cds
Length = 2128
Score = 1308 bits (660), Expect = 0.0
Identities = 1299/1512 (85%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 1729 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 1670
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 1669 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 1610
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 1609 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 1550
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 1549 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 1490
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 1489 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 1430
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 1429 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 1370
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 1369 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 1310
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggc 793
| ||||| || ||||||||||||||||||| ||||||||||| || |||||||| || |
Sbjct: 1309 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctgaggac 1250
Query: 794 cctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttgg 853
|||| ||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 1249 cctgctcaacacctttcctgaatggatcaccaactacacgcttcaaagcacgagcctttg 1190
Query: 854 ccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagc 913
|||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1189 acttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagacccagcgcagc 1130
Query: 914 agcattgtccctggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaacat 973
||||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||||| ||
Sbjct: 1129 agcattgcccctggttgaaaaacagcgcaaaatgcgcaagctcaacagcttggtcaatat 1070
Query: 974 cagcatcgtccattatgatgaaaggggacttgcctcctaactccagtgtcactgtcttaa 1033
| ||||| ||||| | ||| ||||| ||||||||||||| |||||||||||||| |||||
Sbjct: 1069 ctgcatcatccatgacgataaaaggagacttgcctcctagctccagtgtcactgccttaa 1010
Query: 1034 ggttgctctttgcagccaactcgagaataatttttccagtatcggtagatccagtaaatg 1093
| |||||| ||||| ||||| ||||||| ||| ||||||||||| |||||||| ||||
Sbjct: 1009 gattgctccgtgcagataactcaagaataactttcccagtatcggttgatccagtgaatg 950
Query: 1094 cgatcttatcaacatccatgtgactagcaagagcagcaccagcagtagggccaaaaccag 1153
| ||||| ||||| |||||||| | |||||||||||| ||||| ||||| ||||||||||
Sbjct: 949 caatcttgtcaacgtccatgtggccagcaagagcagccccagcggtaggaccaaaaccag 890
Query: 1154 aaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaatttggagatataca 1213
| | || ||||| ||||| || || ||||||||||||||||||| || || | ||| |
Sbjct: 889 atatgatgttcaggacaccttcgggtagtccagcctcatgcaacagcttagaaacataga 830
Query: 1214 aagccgatagaggggtttgttcagcagtcttgagcacgagagtatttccacatgccaaag 1273
|| |||||||| ||||||||||| |||||||| || | ||| || ||||| |||||||
Sbjct: 829 gggcagatagaggagtttgttcagcggtcttgagaacaatagtgttcccacaggccaaag 770
Query: 1274 cagggccaactttccaggcaaacatcagaagaggaaagttccatgggatgatctgacctg 1333
||||||||||||||||| || |||||| ||| || |||||||| ||||||||||||||
Sbjct: 769 cagggccaactttccagccatacatcaaaagtgggaagttccacgggatgatctgaccca 710
Query: 1334 caactccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatga 1393
| || ||||| |||||||||| | |||||||||||| |||||||||||||| || ||||
Sbjct: 709 cgacaccaatcggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatga 650
Query: 1394 gcccatggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgggta 1453
| ||||||||||| |||| ||| || |||||||| |||||||| || || | ||| || |
Sbjct: 649 ggccatggatcttgtcagtccagcctgcatagtaccgcataagccgagcaagcattggca 590
Query: 1454 cttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaa 1513
|||| || ||||| ||||||||||| ||||||||||||||||| ||||||| |||||||
Sbjct: 589 cttcgatgtgggcagcttgctcatagggcttcccgttgtcccacgtctccagtgcagcaa 530
Query: 1514 gctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctcat 1573
|| |||||||| |||||||||||||||||||| |||| || || |||||||||||||
Sbjct: 529 tttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcat 470
Query: 1574 aggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactgcac 1633
||||||||||||| ||||||||||||||||| || |||||||| |||||| | |||||||
Sbjct: 469 aggcagtcatctttggccatggcccttcatcgaatgccttgcgggccgcaacaactgcac 410
Query: 1634 ggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgagggt 1693
||| | || || || || || |||| |||| | |||||||||||||| || |||||||
Sbjct: 409 ggtccacatcttcggcatctccttcagacacacgggcaatcacctccccggtgcgagggt 350
Query: 1694 ccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggagct 1753
||||||| ||||| |||||||| ||||| | |||||| || || || || ||||||||||
Sbjct: 349 ccagagtcgggaaagtcttgccagatgcagcatcaacgaatttgccgttgatgaggagct 290
Query: 1754 ttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgctga 1813
||| | | ||| ||||| || |||| |||||| |||||| ||||||||||||||| ||
Sbjct: 289 gtgtctcgcccacttggacagaaggcgagatgggttcctctgctgctgctgcagtgccga 230
Query: 1814 acctctgaagga 1825
||||||||||||
Sbjct: 229 acctctgaagga 218
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 134 aggcagcgggagacgagcgaggaggcggccctcc 101
>gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 5', mRNA sequence
Length = 638
Score = 664 bits (335), Expect = 0.0
Identities = 539/607 (88%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 631 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 572
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 571 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 512
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 511 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 452
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 451 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 392
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 391 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 332
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 331 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 272
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 271 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 212
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggc 793
| ||||| || ||||||||||||||||||| ||||||||||| || |||||||| || |
Sbjct: 211 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctgaggac 152
Query: 794 cctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttgg 853
|||| ||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 151 cctgctcaacacctttcctgaatggatcaccaactacacgcttcaaagcacgagcctttg 92
Query: 854 ccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagc 913
|||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 91 acttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagacccagcgcagc 32
Query: 914 agcattg 920
|||||||
Sbjct: 31 agcattg 25
>gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 5', mRNA sequence
Length = 696
Score = 664 bits (335), Expect = 0.0
Identities = 539/607 (88%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 643 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 584
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 583 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 524
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 523 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 464
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 463 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 404
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 403 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 344
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 343 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 284
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 283 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 224
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggc 793
| ||||| || ||||||||||||||||||| ||||||||||| || |||||||| || |
Sbjct: 223 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctgaggac 164
Query: 794 cctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttgg 853
|||| ||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 163 cctgctcaacacctttcctgaatggatcaccaactacacgcttcaaagcacgagcctttg 104
Query: 854 ccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagc 913
|||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 103 acttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagacccagcgcagc 44
Query: 914 agcattg 920
|||||||
Sbjct: 43 agcattg 37
>gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018D16f, mRNA sequence
Length = 803
Score = 583 bits (294), Expect = e-165
Identities = 492/558 (88%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 558 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 499
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 498 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 439
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 438 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 379
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 378 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 319
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 318 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 259
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 258 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 199
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 198 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 139
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggc 793
| ||||| || ||||||||||||||||||| ||||||||||| || |||||||| || |
Sbjct: 138 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctgaggac 79
Query: 794 cctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttgg 853
|||| ||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 78 cctgctcaacacctttcctgaatggatcaccaactacacgcttcaaagcacgagcctttg 19
Query: 854 ccttctccacaaactcat 871
|||||| ||||||||||
Sbjct: 18 acttctcaacaaactcat 1
>gb|BF266942.2|BF266942 HV_CEa0016I01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016I01f, mRNA sequence
Length = 837
Score = 565 bits (285), Expect = e-159
Identities = 495/565 (87%)
Strand = Plus / Minus
Query: 536 ccaatccatactggctcgcgtttgccctcttgataacctcattgaggtctttgaacttga 595
||||||| || ||||| ||||| | ||||||||| ||||| |||||||| ||||||||||
Sbjct: 567 ccaatccgtaatggctggcgttcgacctcttgatcacctcgttgaggtcattgaacttga 508
Query: 596 ggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatgccgtcctggacat 655
||| | ||| |||||||| |||||||||||||| || ||||||||| | ||||| ||||
Sbjct: 507 agattgcctgaacaggcccgaatatctcctcctgggctatcttcatgtcatcctgcacat 448
Query: 656 ctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcaccacccgtca 715
|||||||||| ||||||||||||||| |||| |||||||||||| | |||||||||||||
Sbjct: 447 ctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcaccacccgtca 388
Query: 716 caagggtagctccaccgtcaacaccatacctaatgtagcgcaagatcttgttgaattgct 775
||||||| ||||||| ||| ||||| || ||||||||||||||||||| ||||||||||
Sbjct: 387 caagggtggctccactgtcgacacccgacttaatgtagcgcaagatcttcttgaattgct 328
Query: 776 cgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatcaccaacgacgcgct 835
| || |||||||| || ||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 327 catcatcaatctgaggaccctgctcaacacctttcctgaatggatcaccaactacacgct 268
Query: 836 tcaatgcacgagccttggccttctccacaaactcatcataaacacgctcatgtacaaacg 895
|||| ||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 267 tcaaagcacgagcctttgacttctcaacaaactcatcataaacacgctcatgtacgaacg 208
Query: 896 tgcgagatccagcgcagcagcattgtccctggttaaagaacagggcaaagtgcgcaagct 955
||||||| ||||||||||||||||| |||||||| || ||||| ||||| ||||||||||
Sbjct: 207 tgcgagacccagcgcagcagcattgcccctggttgaaaaacagcgcaaaatgcgcaagct 148
Query: 956 caacagcatggtcaacatcagcatcgtccattatgatgaaaggggacttgcctcctaact 1015
||||||| ||||||| ||| ||||| ||||| | ||| ||||| ||||||||||||| ||
Sbjct: 147 caacagcttggtcaatatctgcatcatccatgacgataaaaggagacttgcctcctagct 88
Query: 1016 ccagtgtcactgtcttaaggttgctctttgcagccaactcgagaataatttttccagtat 1075
|||||||||||| |||||| |||||| ||||| ||||| ||||||| ||| |||||||
Sbjct: 87 ccagtgtcactgccttaagattgctccgtgcagataactcaagaataactttcccagtat 28
Query: 1076 cggtagatccagtaaatgcgatctt 1100
|||| |||||||| ||||| |||||
Sbjct: 27 cggttgatccagtgaatgcaatctt 3
>gb|BJ545003.1|BJ545003 BJ545003 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42a08 5', mRNA sequence
Length = 631
Score = 561 bits (283), Expect = e-158
Identities = 541/627 (86%)
Strand = Plus / Minus
Query: 690 gtcacccaacctatcaccacccgtcacaagggtagctccaccgtcaacaccatacctaat 749
|||||||||| | |||||||||||||||||||| ||||||| ||| ||||| || ||||
Sbjct: 631 gtcacccaacttgtcaccacccgtcacaagggtggctccactgtcgacacccgacttaat 572
Query: 750 gtagcgcaagatcttgttgaattgctcgtcgtcaatctgcgggccctgttcaacaccttt 809
||||||||||||||| ||||||||||| || |||||||| || ||||| |||||||||||
Sbjct: 571 gtagcgcaagatcttcttgaattgctcatcatcaatctgaggaccctgctcaacaccttt 512
Query: 810 cctgaacggatcaccaacgacgcgcttcaatgcacgagccttggccttctccacaaactc 869
|||||| ||||||||||| || |||||||| ||||||||||| | |||||| ||||||||
Sbjct: 511 cctgaatggatcaccaactacacgcttcaaagcacgagcctttgacttctcaacaaactc 452
Query: 870 atcataaacacgctcatgtacaaacgtgcgagatccagcgcagcagcattgtccctggtt 929
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 451 atcataaacacgctcatgtacgaacgtgcgagacccagcgcagcagcattgcccctggtt 392
Query: 930 aaagaacagggcaaagtgcgcaagctcaacagcatggtcaacatcagcatcgtccattat 989
|| ||||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||||| |
Sbjct: 391 gaaaaacagcgcaaaatgcgcaagctcaacagcttggtcaatatctgcatcatccatgac 332
Query: 990 gatgaaaggggacttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagc 1049
||| ||||| ||||||||||||| |||||||||||||| |||||| |||||| |||||
Sbjct: 331 gataaaaggagacttgcctcctagctccagtgtcactgccttaagattgctccgtgcaga 272
Query: 1050 caactcgagaataatttttccagtatcggtagatccagtaaatgcgatcttatcaacatc 1109
||||| ||||||| ||| ||||||||||| |||||||| ||||| ||||| ||||| ||
Sbjct: 271 taactcaagaataactttcccagtatcggttgatccagtgaatgcaatcttgtcaacgtc 212
Query: 1110 catgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacgttcacaac 1169
|||||| | |||||||||||| ||||| ||||| ||||||||||| | || ||||| ||
Sbjct: 211 catgtggccagcaagagcagccccagcggtaggaccaaaaccagatatgatgttcaggac 152
Query: 1170 accctcaggcagtccagcctcatgcaacaatttggagatatacaaagccgatagaggggt 1229
||| || || ||||||||||||||||||| || || | ||| | || |||||||| ||
Sbjct: 151 accttcgggtagtccagcctcatgcaacagcttagaaacatagagggcagatagaggagt 92
Query: 1230 ttgttcagcagtcttgagcacgagagtatttccacatgccaaagcagggccaactttcca 1289
||||||||| |||||||| || | ||| || ||||| |||||||||||||||||||||||
Sbjct: 91 ttgttcagcggtcttgagaacaatagtgttcccacaggccaaagcagggccaactttcca 32
Query: 1290 ggcaaacatcagaagaggaaagttcca 1316
| || |||||| ||| || ||||||||
Sbjct: 31 gccatacatcaaaagtgggaagttcca 5
>gb|BJ545021.1|BJ545021 BJ545021 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e14 5', mRNA sequence
Length = 632
Score = 553 bits (279), Expect = e-156
Identities = 534/619 (86%)
Strand = Plus / Minus
Query: 703 tcaccacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatc 762
|||||||||||||||||||| ||||||| ||| ||||| || |||||||||||||||||
Sbjct: 632 tcaccacccgtcacaagggtggctccactgtcgacacccgacttaatgtagcgcaagatc 573
Query: 763 ttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatca 822
|| ||||||||||| || |||||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 572 ttcttgaattgctcatcatcaatctgaggaccctgctcaacacctttcctgaatggatca 513
Query: 823 ccaacgacgcgcttcaatgcacgagccttggccttctccacaaactcatcataaacacgc 882
||||| || |||||||| ||||||||||| | |||||| |||||||||||||||||||||
Sbjct: 512 ccaactacacgcttcaaagcacgagcctttgacttctcaacaaactcatcataaacacgc 453
Query: 883 tcatgtacaaacgtgcgagatccagcgcagcagcattgtccctggttaaagaacagggca 942
|||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||| |||
Sbjct: 452 tcatgtacgaacgtgcgagacccagcgcagcagcattgcccctggttgaaaaacagcgca 393
Query: 943 aagtgcgcaagctcaacagcatggtcaacatcagcatcgtccattatgatgaaaggggac 1002
|| ||||||||||||||||| ||||||| ||| ||||| ||||| | ||| ||||| |||
Sbjct: 392 aaatgcgcaagctcaacagcttggtcaatatctgcatcatccatgacgataaaaggagac 333
Query: 1003 ttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagccaactcgagaata 1062
|||||||||| |||||||||||||| |||||| |||||| ||||| ||||| ||||||
Sbjct: 332 ttgcctcctagctccagtgtcactgccttaagattgctccgtgcagataactcaagaata 273
Query: 1063 atttttccagtatcggtagatccagtaaatgcgatcttatcaacatccatgtgactagca 1122
| ||| ||||||||||| |||||||| ||||| ||||| ||||| |||||||| | ||||
Sbjct: 272 actttcccagtatcggttgatccagtgaatgcaatcttgtcaacgtccatgtggccagca 213
Query: 1123 agagcagcaccagcagtagggccaaaaccagaaacgacgttcacaacaccctcaggcagt 1182
|||||||| ||||| ||||| ||||||||||| | || ||||| ||||| || || |||
Sbjct: 212 agagcagccccagcggtaggaccaaaaccagatatgatgttcaggacaccttcgggtagt 153
Query: 1183 ccagcctcatgcaacaatttggagatatacaaagccgatagaggggtttgttcagcagtc 1242
|||||||||||||||| || || | ||| | || |||||||| ||||||||||| |||
Sbjct: 152 ccagcctcatgcaacagcttagaaacatagagggcagatagaggagtttgttcagcggtc 93
Query: 1243 ttgagcacgagagtatttccacatgccaaagcagggccaactttccaggcaaacatcaga 1302
||||| || | ||| || ||||| |||||||||||||||||||||||| || |||||| |
Sbjct: 92 ttgagaacaatagtgttcccacaggccaaagcagggccaactttccagccatacatcaaa 33
Query: 1303 agaggaaagttccatggga 1321
|| || |||||||| ||||
Sbjct: 32 agtgggaagttccacggga 14
>gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018F16f, mRNA sequence
Length = 808
Score = 523 bits (264), Expect = e-147
Identities = 448/508 (88%), Gaps = 1/508 (0%)
Strand = Plus / Minus
Query: 346 accgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatgccg 405
|||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 526 accgccttgacttgcaggtagttcttcaggctgtggatgcccttctccctaccgatgccg 467
Query: 406 ctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacccag 465
|||||||||||||| || || || ||||| |||||||||| ||| |||||||||||||||
Sbjct: 466 ctcatcttgtacccgccgaaggggatcgcggcatcgaagatgtcaaagcagttcacccag 407
Query: 466 acggtcccggccctgagcgcg-cgcgtcagggtgttggccgtgtccaggctgttggtgaa 524
| || ||||||||||| || ||||||| ||||||||||||||||||| ||||||| ||
Sbjct: 406 atcgtgccggccctgagggcatcgcgtcaaggtgttggccgtgtccaggttgttggtaaa 347
Query: 525 cacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgaggtc 584
||||||||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 346 aacgccggcggccaatccgtactggcatgcgttcgccctcttgatcacctcgttgaggtc 287
Query: 585 tttgaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatgcc 644
|||||||||| ||| ||||| |||||||| |||||||||||||| || ||||||||| |
Sbjct: 286 attgaacttgaagattgactgaacaggcccgaatatctcctcctgggctatcttcatgtc 227
Query: 645 gtcctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatc 704
||||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | ||
Sbjct: 226 atcctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtc 167
Query: 705 accacccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatctt 764
|||||||||||||||||| ||||||| ||| ||||| || |||||||||||||||||||
Sbjct: 166 accacccgtcacaagggtggctccactgtcgacacccgacttaatgtagcgcaagatctt 107
Query: 765 gttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatcacc 824
||||||||||| || |||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 106 cttgaattgctcatcatcaatctgaggaccctgctcaacacctttcctgaatggatcacc 47
Query: 825 aacgacgcgcttcaatgcacgagccttg 852
||| || |||||||| ||||||||||||
Sbjct: 46 aactacacgcttcaaagcacgagccttg 19
>gb|BE060168.2|BE060168 HVSMEg0011C03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011C03f, mRNA sequence
Length = 633
Score = 507 bits (256), Expect = e-142
Identities = 527/615 (85%), Gaps = 2/615 (0%)
Strand = Plus / Minus
Query: 703 tcaccacccgtcacaagggtagctcc-accgtcaacaccatacctaatgtagcgcaagat 761
||||||||||||||||||| ||||| || ||| ||||| || ||||||||||||||||
Sbjct: 615 tcaccacccgtcacaaggggtgctcccactgtcgacacccgacttaatgtagcgcaagat 556
Query: 762 cttgttgaattgctcgtcgtcaatctgcgggccctgttcaacacctttcctgaacggatc 821
||| ||||||||||| || |||||||| || || || ||||||||||||||||| |||||
Sbjct: 555 cttcttgaattgctcatcatcaatctgaggaccntgctcaacacctttcctgaatggatc 496
Query: 822 accaacgacgcgcttcaatgcacgagccttggccttctccacaaactcatcataaacacg 881
|||||| || |||||||| ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 495 accaactacacgcttcaaagcacgagcctttgacttctcaacaaactcatcataaacacg 436
Query: 882 ctcatgtacaaacgtgcgagatccagcgcagcagcattgtccctggttaaagaacagggc 941
||||||||| |||||||||| ||||||||||||||||| |||||||| || ||||| ||
Sbjct: 435 ctcatgtacgaacgtgcgagc-ccagcgcagcagcattgcccctggttgaaaaacagcgc 377
Query: 942 aaagtgcgcaagctcaacagcatggtcaacatcagcatcgtccattatgatgaaagggga 1001
||| ||||||||||||||||| ||||||| ||| ||||| ||||| | ||| ||||| ||
Sbjct: 376 aaaatgcgcaagctcaacagcttggtcaatatctgcatcatccatgacgataaaaggaga 317
Query: 1002 cttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagccaactcgagaat 1061
||||||||||| |||||||||||||| |||||| |||||| ||||| ||||| |||||
Sbjct: 316 cttgcctcctagctccagtgtcactgccttaagattgctccgtgcagataactcaagaat 257
Query: 1062 aatttttccagtatcggtagatccagtaaatgcgatcttatcaacatccatgtgactagc 1121
|| ||| ||||||||||| |||||||| ||||| ||||| ||||| |||||||| | |||
Sbjct: 256 aactttcccagtatcggttgatccagtgaatgcaatcttgtcaacgtccatgtggccagc 197
Query: 1122 aagagcagcaccagcagtagggccaaaaccagaaacgacgttcacaacaccctcaggcag 1181
||||||||| ||||| ||||| ||||||||||| | || ||||| ||||| || || ||
Sbjct: 196 aagagcagccccagcggtaggaccaaaaccagatatgatgttcaggacaccttcgggtag 137
Query: 1182 tccagcctcatgcaacaatttggagatatacaaagccgatagaggggtttgttcagcagt 1241
||||||||||||||||| || || | ||| | || |||||||| ||||||||||| ||
Sbjct: 136 tccagcctcatgcaacagcttagaaacatagagggcagatagaggagtttgttcagcggt 77
Query: 1242 cttgagcacgagagtatttccacatgccaaagcagggccaactttccaggcaaacatcag 1301
|||||| || | ||| || ||||| |||||||||||||||||||||||| || ||||||
Sbjct: 76 cttgagaacaatagtgttcccacaggccaaagcagggccaactttccagccatacatcaa 17
Query: 1302 aagaggaaagttcca 1316
||| || ||||||||
Sbjct: 16 aagtgggaagttcca 2
>gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB22L24
5-PRIME, mRNA sequence
Length = 629
Score = 505 bits (255), Expect = e-141
Identities = 420/475 (88%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 493 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 434
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 433 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 374
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 373 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 314
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 313 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 254
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 253 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 194
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 193 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 134
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 133 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 74
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctg 788
| ||||| || ||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 73 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctg 19
>gb|BF267689.2|BF267689 HV_CEa0018J22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018J22f, mRNA sequence
Length = 859
Score = 494 bits (249), Expect = e-138
Identities = 679/815 (83%), Gaps = 6/815 (0%)
Strand = Plus / Minus
Query: 904 ccagcgcagcagcattgtccctggttaaagaacagggcaaagtgcg-caagctcaacagc 962
|||| |||||||||||| |||| ||| || ||||| ||||| |||| |||||||||||||
Sbjct: 818 ccagggcagcagcattg-cccttgttgaaaaacagcgcaaaatgcgncaagctcaacagc 760
Query: 963 at-ggtcaacatcagcatcgtccattatgatgaaaggggacttgcctcctaactccagtg 1021
| |||||| || ||||| ||||| | ||| ||||| |||||||||| | ||||||||
Sbjct: 759 tttggtcaatatntgcatcatccatgacgataaaaggagacttgcctctnagctccagtg 700
Query: 1022 tcactgtcttaaggttgctctttgcagccaactcgagaataatttttccagtatcggtag 1081
|| ||| || ||| |||||| ||||| ||||| ||||||| ||| ||||||||||| |
Sbjct: 699 tccctgcct-aagattgctccgtgcagataactcaagaataactttcccagtatcggttg 641
Query: 1082 atccagtaaatgcgatcttatcaacat-ccatgtgactagcaagagcagcaccagcagta 1140
||||||| ||||| |||| ||||| | ||||||| | |||||||||||| ||||| |||
Sbjct: 640 atccagtgaatgcaatctg-tcaacgtnccatgtggccagcaagagcagccccagcggta 582
Query: 1141 gggccaaaaccagaaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaat 1200
|| ||||||||||| | || ||||| ||||| || || |||||||||||||||||||
Sbjct: 581 ggaccaaaaccagatatgatgttcaggacaccttcgggtagtccagcctcatgcaacagc 522
Query: 1201 ttggagatatacaaagccgatagaggggtttgttcagcagtcttgagcacgagagtattt 1260
|| || | ||| | || |||||||| ||||||||||| |||||||| || | ||| ||
Sbjct: 521 ttagaaacatagagggcagatagaggagtttgttcagcggtcttgagaacaatagtgttc 462
Query: 1261 ccacatgccaaagcagggccaactttccaggcaaacatcagaagaggaaagttccatggg 1320
||||| |||||||||||||||||||||||| || |||||| ||| || |||||||| |||
Sbjct: 461 ccacaggccaaagcagggccaactttccagccatacatcaaaagtgggaagttccacggg 402
Query: 1321 atgatctgacctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatca 1380
||||||||||| | || ||||| |||||||||| | |||||||||||| |||||||||
Sbjct: 401 atgatctgacccacgacaccaatcggctcatgcagcacctgtacatggtgcgggccatca 342
Query: 1381 gccggcacaatgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgg 1440
||||| || ||||| ||||||||||| |||| ||| || |||||||| |||||||| ||
Sbjct: 341 gccggtacgatgaggccatggatcttgtcagtccagcctgcatagtaccgcataagccga 282
Query: 1441 gccaccatgggtacttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtc 1500
|| | ||| || ||||| || ||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 281 gcaagcattggcacttcgatgtgggcagcttgctcatagggcttcccgttgtcccacgtc 222
Query: 1501 tccaaagcagcaagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggata 1560
|||| ||||||| || |||||||| |||||||||||||||||||| |||| || ||
Sbjct: 221 tccagtgcagcaatttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatc 162
Query: 1561 cgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagcc 1620
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||
Sbjct: 161 cgggacctctcataggcagtcatctttggccatggcccttcatcgaatgccttgcgggcc 102
Query: 1621 gcagctactgcacggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcc 1680
||| | |||||||||| | || || || || || |||| |||| | ||||||||||||
Sbjct: 101 gcaacaactgcacggtccacatcttcggcatctccttcagacacacgggcaatcacctcc 42
Query: 1681 cctgtacgagggtccagagttgggaaggtcttgcc 1715
|| || |||||||||||||| ||||| ||||||||
Sbjct: 41 ccggtgcgagggtccagagtcgggaaagtcttgcc 7
>gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H09_SK.ab1 similar to aldehyde dehydrogenase [Oryza
sativa], T-cytoplasm male sterility restorer factor 2
[Zea mays],aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A
precursor, mitochondrial [Nicotiana tabacum],aldehyde
dehydrogenase ALDH2b [Oryza sativa], mRNA sequence
Length = 896
Score = 490 bits (247), Expect = e-136
Identities = 418/475 (88%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 507 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 448
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 447 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 388
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 387 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 328
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 327 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 268
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| || |||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 267 cgttcgctctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 208
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 207 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 148
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 147 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 88
Query: 734 caacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtcaatctg 788
| ||||| || ||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 87 cgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatcaatctg 33
>gb|BJ447724.1|BJ447724 BJ447724 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak17a20 5', mRNA sequence
Length = 533
Score = 458 bits (231), Expect = e-127
Identities = 414/475 (87%)
Strand = Plus / Minus
Query: 724 gctccaccgtcaacaccatacctaatgtagcgcaagatcttgttgaattgctcgtcgtca 783
||||||| ||| ||||| || ||||||||||||||||||| ||||||||||| || |||
Sbjct: 529 gctccactgtcgacacccgacttaatgtagcgcaagatcttcttgaattgctcatcatca 470
Query: 784 atctgcgggccctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgca 843
||||| || ||||| ||||||||||||||||| ||||||||||| || |||||||| |||
Sbjct: 469 atctgaggaccctgctcaacacctttcctgaatggatcaccaactacacgcttcaaagca 410
Query: 844 cgagccttggccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagat 903
|||||||| | |||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 409 cgagcctttgacttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagac 350
Query: 904 ccagcgcagcagcattgtccctggttaaagaacagggcaaagtgcgcaagctcaacagca 963
||||||||||||||||| |||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 349 ccagcgcagcagcattgcccctggttgaaaaacagcgcaaaatgcgcaagctcaacagct 290
Query: 964 tggtcaacatcagcatcgtccattatgatgaaaggggacttgcctcctaactccagtgtc 1023
||||||| ||| ||||| ||||| | ||| ||||| ||||||||||||| ||||||||||
Sbjct: 289 tggtcaatatctgcatcatccatgacgataaaaggagacttgcctcctagctccagtgtc 230
Query: 1024 actgtcttaaggttgctctttgcagccaactcgagaataatttttccagtatcggtagat 1083
|||| |||||| |||||| ||||| ||||| ||||||| ||| ||||||||||| |||
Sbjct: 229 actgccttaagattgctccgtgcagataactcaagaataactttcccagtatcggttgat 170
Query: 1084 ccagtaaatgcgatcttatcaacatccatgtgactagcaagagcagcaccagcagtaggg 1143
||||| ||||| ||||| ||||| |||||||| | |||||||||||| ||||| |||||
Sbjct: 169 ccagtgaatgcaatcttgtcaacgtccatgtggccagcaagagcagccccagcggtagga 110
Query: 1144 ccaaaaccagaaacgacgttcacaacaccctcaggcagtccagcctcatgcaaca 1198
||||||||||| | || ||||| ||||| || || |||||||||||||||||||
Sbjct: 109 ccaaaaccagatatgatgttcaggacaccttcgggtagtccagcctcatgcaaca 55
>gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_H11 5', mRNA sequence
Length = 481
Score = 454 bits (229), Expect = e-126
Identities = 394/449 (87%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 449 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 390
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 389 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 330
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || |||||| |||| || |||||||
Sbjct: 329 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccttgagggcacgcgtca 270
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 269 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 210
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 209 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 150
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 149 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 90
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctccaccgt 733
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||| ||
Sbjct: 89 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctccactgt 30
Query: 734 caacaccatacctaatgtagcgcaagatc 762
||||| | |||||||||||||||||
Sbjct: 29 agacacccgagttaatgtagcgcaagatc 1
>gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12o18 3', mRNA sequence
Length = 657
Score = 446 bits (225), Expect = e-123
Identities = 363/409 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 242 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 301
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 302 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 361
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 362 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 421
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 422 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 481
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 482 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 541
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 542 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 601
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggt 722
|||||||| |||| |||||||||||| | ||||||||||||||||||||
Sbjct: 602 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggt 650
>gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 3', mRNA sequence
Length = 672
Score = 444 bits (224), Expect = e-123
Identities = 368/416 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 257 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 316
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 317 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 376
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 377 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 436
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 437 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 496
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 497 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 556
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 557 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 616
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccacccgtcacaagggtagctcca 729
|||||||| |||| |||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 617 ggatgtagtaacctttgtcacccaacttgtcaccacccgtcacaagggtggctcca 672
>gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O20f, mRNA sequence
Length = 440
Score = 436 bits (220), Expect = e-120
Identities = 385/440 (87%)
Strand = Plus / Minus
Query: 348 cgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctcccgatgccgct 407
|||||| || |||||||||||||||||||||| | |||||| ||||| ||||||||| |
Sbjct: 440 cgccttgacttgcaggtagttcttcaggctgtgattgcccttatccctaccgatgccgat 381
Query: 408 catcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagttcacccagac 467
|||||||||||| || || || ||||| |||| ||| | ||| ||||||||||||||||
Sbjct: 380 catcttgtacccgccgaaggggatcgcggcattgaacatgtcaaagcagttcacccagat 321
Query: 468 ggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgttggtgaacac 527
|| ||||||||||| || ||||||| ||||||||||||||||||| ||||||| || ||
Sbjct: 320 cgtgccggccctgagggcacgcgtcaaggtgttggccgtgtccaggttgttggtaaaaac 261
Query: 528 gccggcggccaatccatactggctcgcgtttgccctcttgataacctcattgaggtcttt 587
||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 260 gccggcggccaatccgtactggcttgcgttcgccctcttgatcacctcgttgaggtcatt 201
Query: 588 gaacttgaggatcgactgcacaggcccaaatatctcctcctgagcaatcttcatgccgtc 647
|||||||| ||| ||||| |||||||| |||||||||||||| || ||||||||| | ||
Sbjct: 200 gaacttgaagattgactgaacaggcccgaatatctcctcctgggctatcttcatgtcatc 141
Query: 648 ctggacatctgagaaaatcgttggctggatgtagaaacccttgtcacccaacctatcacc 707
||| |||||||||||||| ||||||||||||||| |||| |||||||||||| | |||||
Sbjct: 140 ctgcacatctgagaaaattgttggctggatgtagtaacctttgtcacccaacttgtcacc 81
Query: 708 acccgtcacaagggtagctccaccgtcaacaccatacctaatgtagcgcaagatcttgtt 767
||||||||||||||| ||||||| ||| ||||| || ||||||||||||||||||| ||
Sbjct: 80 acccgtcacaagggtggctccactgtcgacacccgacttaatgtagcgcaagatcttctt 21
Query: 768 gaattgctcgtcgtcaatct 787
||||||||| || |||||||
Sbjct: 20 gaattgctcatcatcaatct 1
>gb|AU252380.1|AU252380 AU252380 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-O07 similar to Rf2 nuclear restore
protein, mRNA sequence
Length = 752
Score = 436 bits (220), Expect = e-120
Identities = 503/593 (84%), Gaps = 4/593 (0%)
Strand = Plus / Minus
Query: 793 ccctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttg 852
||||| |||| ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct: 734 ccctgctcaatncctttcctgaatggatcaccaactacacgcttcaaagcacgagccttt 675
Query: 853 gccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcag 912
| |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 674 gacttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagacccagcgcag 615
Query: 913 cagcattgtccctggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaaca 972
|||||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||||| |
Sbjct: 614 cagcattgcccctggttgaaaaacagcgcaaaatgcgcaagctcaacagcttggtcaata 555
Query: 973 tcagcatcgtccattatgatgaaaggggacttgcctcctaactccagtgtcactgtctta 1032
|| ||||| ||||| | ||| ||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 554 tctgcatcatccatgacgataaaaggagacttgcctcctagctccagtgtcactgcctta 495
Query: 1033 aggttgctctttgcagccaactcgagaataatttttccagtatcggtagatccagtaaat 1092
|| |||||| ||||| ||||| ||||||| ||| ||||||||||| |||||||| |||
Sbjct: 494 agattgctccgtgcagataactcaagaataactttcccagtatcggttgatccagtgaat 435
Query: 1093 gcgatcttatcaacatccatgtgactagcaagagcagcaccagcagtagggccaaaacca 1152
|| ||||| ||||| |||||||| | |||||||||||| ||||| ||||| |||||||||
Sbjct: 434 gcaatcttgtcaacgtccatgtggccagcaagagcagccccagcggtaggaccaaaacca 375
Query: 1153 gaaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaa-tttggagatata 1211
|| | || ||||| ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 374 gatatgatgttcaggacaccttcgggtagtccagcctcatgcaacaagcttagaaacata 315
Query: 1212 caaagccgatagaggggtttgttcagcagtcttgagcacgagagtatttccacatgccaa 1271
| || |||||||| ||||| ||||| |||||||| || | ||| || ||||| |||||
Sbjct: 314 gagggcagatagaggagtttg-tcagcggtcttgagaacaatagtgttcccacaggccaa 256
Query: 1272 agcagggccaactttccaggcaaacatcagaag-aggaaagttccatgggatgatctgac 1330
||||||||||||||| ||| || |||||| ||| |||||||| || |||||||||||||
Sbjct: 255 agcagggccaacttttcagccatacatcaaaagtgggaaagttncacgggatgatctgac 196
Query: 1331 ctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatcagcc 1383
| | || || || |||||||||| | |||||||||||| |||||||||||
Sbjct: 195 ccacgacaccnatcggctcatgcagcacctgtacatggtg-cggccatcagcc 144
>gb|AU252384.1|AU252384 AU252384 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-O11 similar to Rf2 nuclear restore
protein, mRNA sequence
Length = 752
Score = 436 bits (220), Expect = e-120
Identities = 503/593 (84%), Gaps = 4/593 (0%)
Strand = Plus / Minus
Query: 793 ccctgttcaacacctttcctgaacggatcaccaacgacgcgcttcaatgcacgagccttg 852
||||| |||| ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct: 734 ccctgctcaatncctttcctgaatggatcaccaactacacgcttcaaagcacgagccttt 675
Query: 853 gccttctccacaaactcatcataaacacgctcatgtacaaacgtgcgagatccagcgcag 912
| |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 674 gacttctcaacaaactcatcataaacacgctcatgtacgaacgtgcgagacccagcgcag 615
Query: 913 cagcattgtccctggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaaca 972
|||||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||||| |
Sbjct: 614 cagcattgcccctggttgaaaaacagcgcaaaatgcgcaagctcaacagcttggtcaata 555
Query: 973 tcagcatcgtccattatgatgaaaggggacttgcctcctaactccagtgtcactgtctta 1032
|| ||||| ||||| | ||| ||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 554 tctgcatcatccatgacgataaaaggagacttgcctcctagctccagtgtcactgcctta 495
Query: 1033 aggttgctctttgcagccaactcgagaataatttttccagtatcggtagatccagtaaat 1092
|| |||||| ||||| ||||| ||||||| ||| ||||||||||| |||||||| |||
Sbjct: 494 agattgctccgtgcagataactcaagaataactttcccagtatcggttgatccagtgaat 435
Query: 1093 gcgatcttatcaacatccatgtgactagcaagagcagcaccagcagtagggccaaaacca 1152
|| ||||| ||||| |||||||| | |||||||||||| ||||| ||||| |||||||||
Sbjct: 434 gcaatcttgtcaacgtccatgtggccagcaagagcagccccagcggtaggaccaaaacca 375
Query: 1153 gaaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaa-tttggagatata 1211
|| | || ||||| ||||| || || |||||||||||||||||||| || || | |||
Sbjct: 374 gatatgatgttcaggacaccttcgggtagtccagcctcatgcaacaagcttagaaacata 315
Query: 1212 caaagccgatagaggggtttgttcagcagtcttgagcacgagagtatttccacatgccaa 1271
| || |||||||| ||||| ||||| |||||||| || | ||| || ||||| |||||
Sbjct: 314 gagggcagatagaggagtttg-tcagcggtcttgagaacaatagtgttcccacaggccaa 256
Query: 1272 agcagggccaactttccaggcaaacatcagaag-aggaaagttccatgggatgatctgac 1330
||||||||||||||| ||| || |||||| ||| |||||||| || |||||||||||||
Sbjct: 255 agcagggccaacttttcagccatacatcaaaagtgggaaagttncacgggatgatctgac 196
Query: 1331 ctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatcagcc 1383
| | || || || |||||||||| | |||||||||||| |||||||||||
Sbjct: 195 ccacgacaccnatcggctcatgcagcacctgtacatggtg-cggccatcagcc 144
>gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13d19 3', mRNA sequence
Length = 620
Score = 416 bits (210), Expect = e-114
Identities = 342/386 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 232 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 291
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 292 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 351
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 352 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 411
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 412 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 471
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 472 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 531
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 532 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 591
Query: 674 ggatgtagaaacccttgtcacccaac 699
|||||||| |||| ||||||||||||
Sbjct: 592 ggatgtagtaacctttgtcacccaac 617
>gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 3', mRNA sequence
Length = 624
Score = 412 bits (208), Expect = e-113
Identities = 349/396 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 229 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 288
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 289 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 348
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 349 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 408
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 409 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 468
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 469 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 528
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 529 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 588
Query: 674 ggatgtagaaacccttgtcacccaacctatcaccac 709
|||||||| |||| |||||||||||| | |||||||
Sbjct: 589 ggatgtagtaacctttgtcacccaacttgtcaccac 624
>gb|BG369080.2|BG369080 HVSMEi0021K10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021K10f, mRNA sequence
Length = 612
Score = 400 bits (202), Expect = e-110
Identities = 514/610 (84%), Gaps = 6/610 (0%)
Strand = Plus / Minus
Query: 807 tttcctgaacggatcaccaacgacgcgcttcaat-gcacgagccttggccttctccacaa 865
||||||||| ||||||||||| | |||||||| ||||||||||| | |||||| ||||
Sbjct: 612 tttcctgaatggatcaccaactccacgcttcaaaagcacgagcctttgacttctcaacaa 553
Query: 866 actcatcataaacacgctcatgtacaaacgtgcgagatccagcgcagcagcattgtccct 925
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 552 actcatcataaacacgctcatgtacgaacgtgcgagacccagcgcagcagcattgcccct 493
Query: 926 ggttaaagaacagggcaaagtgcgcaagctcaacagcatggtcaacatcagcatcgtcca 985
|||| || | ||| ||||| ||||||||||||||||| ||||||| ||| ||||| ||||
Sbjct: 492 ggttgaaaaccagcgcaaaatgcgcaagctcaacagcttggtcaatatctgcatcatcca 433
Query: 986 ttatgatgaaaggggacttgcctcctaactccagtgtcactgtcttaaggttgctctttg 1045
| | ||| ||||| ||||||||||||| |||||||||||||| | ||| |||||| ||
Sbjct: 432 tga-gataaaaggagacttgcctcctagctccagtgtcactgcttaaagattgctccgtg 374
Query: 1046 cagccaactcgag-aataatttttccagtatcggtagatccagtaaatgcgatcttatca 1104
||| ||||| || ||||| ||| ||||||||||| |||||||| ||||| ||||| |||
Sbjct: 373 cagataactcaagaaataactttcccagtatcggttgatccagtgaatgcaatcttgtca 314
Query: 1105 acatccatgtgactagcaagagcagcaccagcagtagggccaaaaccagaaacgacgttc 1164
|| |||||||| | |||||||||||| ||||| ||||| ||||||||||| | || ||||
Sbjct: 313 acgtccatgtggccagcaagagcagccccagcggtaggaccaaaaccagatatgatgttc 254
Query: 1165 a-caacaccctcaggcagtcc-agcctcatgcaacaatttggagatatacaaagccgata 1222
| ||||| || || ||||| |||||||||||||| || || | ||| | || ||||
Sbjct: 253 agggacaccttcgggtagtccaagcctcatgcaacagcttagaaacatagagggcagata 194
Query: 1223 gaggggtttgttcagcagtcttgagcacgagagtatttccaca-tgccaaagcagggcca 1281
|||| ||||||||||| |||||||| || | ||| || ||||| || ||||||||||||
Sbjct: 193 gaggagtttgttcagcggtcttgagaacaatagtgttcccacagggcaaaagcagggcca 134
Query: 1282 actttccaggcaaacatcagaagaggaaagttccatgggatgatctgacctgcaactcca 1341
||||||||| || |||||| ||| || |||||||| |||||||||||||| | || |||
Sbjct: 133 actttccagccatacatcaaaagtgggaagttccacgggatgatctgacccacgacacca 74
Query: 1342 attggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagcccatgg 1401
|| |||||||||| | |||||||||||| |||||||||||||| || ||||| ||||||
Sbjct: 73 atcggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatgaggccatgg 14
Query: 1402 atcttatcag 1411
||||| ||||
Sbjct: 13 atcttgtcag 4
>gb|BE454594.2|BE454594 HVSMEh0094K18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0094K18f, mRNA sequence
Length = 967
Score = 389 bits (196), Expect = e-106
Identities = 466/556 (83%)
Strand = Plus / Minus
Query: 1081 gatccagtaaatgcgatcttatcaacatccatgtgactagcaagagcagcaccagcagta 1140
|||||||||||||| |||| ||| | || ||||| | ||||||| |||| ||||| |||
Sbjct: 582 gatccagtaaatgcattcttgtcaccgtcaatgtggccagcaagaccagccccagcggta 523
Query: 1141 gggccaaaaccagaaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaat 1200
|| ||||||||||| | || ||||| ||||| || || |||||||||||||||| |
Sbjct: 522 ggaccaaaaccagatatgatgttcaggacaccttcgggtagtccagcctcatgcacaagc 463
Query: 1201 ttggagatatacaaagccgatagaggggtttgttcagcagtcttgagcacgagagtattt 1260
|| || | ||| | || |||||||| ||||||||||| |||||||| || | ||| ||
Sbjct: 462 ttagaaacatagagggcagatagaggagtttgttcagcggtcttgagaacaatagtgttc 403
Query: 1261 ccacatgccaaagcagggccaactttccaggcaaacatcagaagaggaaagttccatggg 1320
||||| |||||||||||||||||||||||| || |||||| ||| || |||||||| |||
Sbjct: 402 ccacaggccaaagcagggccaactttccagccatacatcaaaagtgggaagttccacggg 343
Query: 1321 atgatctgacctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatca 1380
||||||||||| | || ||||| |||||||||| | |||||||||||| |||||||||
Sbjct: 342 atgatctgacccacgacaccaatcggctcatgcagcacctgtacatggtgcgggccatca 283
Query: 1381 gccggcacaatgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgg 1440
||||| || ||||| ||||||||||| |||| ||| || |||||||| |||||||| ||
Sbjct: 282 gccggtacgatgaggccatggatcttgtcagtccagcctgcatagtaccgcataagccga 223
Query: 1441 gccaccatgggtacttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtc 1500
|| | ||| || ||||| || ||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 222 gcaagcattggcacttcgatgtgggcagcttgctcatagggcttcccgttgtcccacgtc 163
Query: 1501 tccaaagcagcaagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggata 1560
|||| ||||||| || |||||||| |||||||||||||||||||| |||| || ||
Sbjct: 162 tccagtgcagcaatttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatc 103
Query: 1561 cgggacctctcataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagcc 1620
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||
Sbjct: 102 cgggacctctcataggcagtcatctttggccatggcccttcatcgaatgccttgcgggcc 43
Query: 1621 gcagctactgcacggt 1636
||| | ||||||||||
Sbjct: 42 gcaacaactgcacggt 27
>gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal35m14 3', mRNA sequence
Length = 581
Score = 379 bits (191), Expect = e-103
Identities = 317/359 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 223 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 282
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 283 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 342
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 343 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 402
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 403 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 462
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 463 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 522
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggc 672
| |||||||||||||| || ||||||||| | ||||| |||||||||||||| ||||||
Sbjct: 523 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgagaaaattgttggc 581
>gb|BG343362.1|BG343362 HVSMEg0005I16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005I16f, mRNA sequence
Length = 949
Score = 377 bits (190), Expect = e-102
Identities = 455/542 (83%), Gaps = 1/542 (0%)
Strand = Plus / Minus
Query: 1284 tttccaggcaaacatcagaagaggaaagttccatgggatgatctgacctgcaactccaat 1343
||||||| || |||||| ||| |||| |||||| |||||||||||||| | || |||||
Sbjct: 573 tttccagccatacatcaaaagtggaa-gttccacgggatgatctgacccacgacaccaat 515
Query: 1344 tggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagcccatggat 1403
|||||||||| | |||||||||||| |||||||||||||| || ||||| ||||||||
Sbjct: 514 cggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatgaggccatggat 455
Query: 1404 cttatcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttcaatctg 1463
||| |||| ||| || |||||||| |||||||| || || | ||| || ||||| || ||
Sbjct: 454 cttgtcagtccagcctgcatagtaccgcataagccgagcaagcattggcacttcgatgtg 395
Query: 1464 ggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcgtcatt 1523
||| ||||||||||| ||||||||||||||||| ||||||| ||||||| || |||||
Sbjct: 394 ggcagcttgctcatagggcttcccgttgtcccacgtctccagtgcagcaatttcatcatt 335
Query: 1524 gtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcat 1583
||| |||||||||||||||||||| |||| || || |||||||||||||||||||||||
Sbjct: 334 gtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggcagtcat 275
Query: 1584 cttcggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtc 1643
||| ||||||||||||||||| || |||||||| |||||| | |||||||||| | ||
Sbjct: 274 ctttggccatggcccttcatcgaatgccttgcgggccgcaacaactgcacggtccacatc 215
Query: 1644 ctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgg 1703
|| || || || |||| |||| | |||||||||||||| || |||||||||||||| ||
Sbjct: 214 ttcggcatctccttcagacacacgggcaatcacctccccggtgcgagggtccagagtcgg 155
Query: 1704 gaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagtt 1763
||| |||||||| ||||| | |||||| || || || || |||||||||| ||| | |
Sbjct: 154 gaaagtcttgccagatgcagcatcaacgaatttgccgttgatgaggagctgtgtctcgcc 95
Query: 1764 cacatggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaag 1823
||| ||||| || |||| |||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 94 cacttggacagaaggcgagatgggttcctctgctgctgctgcagtgccgaacctctgaag 35
Query: 1824 ga 1825
||
Sbjct: 34 ga 33
>gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004N09f, mRNA sequence
Length = 614
Score = 369 bits (186), Expect = e-100
Identities = 336/386 (87%)
Strand = Plus / Minus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||| ||||
Sbjct: 391 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttattca 332
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | ||| |||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 331 ggctgtcgatgcctttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 272
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || |||||| |||| || |||||||
Sbjct: 271 cggcatcgaagatgtcaaagcagttcacccagatcgtaccggccttgagggcacgcgtca 212
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 211 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 152
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||| ||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 151 cgttcgccatcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 92
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgagaaaatcgttggct 673
| ||||||||||| || || ||||||||| | ||||| |||||||||||||| |||||||
Sbjct: 91 cgaatatctcctcatgggctatcttcatgtcatcctgcacatctgagaaaattgttggct 32
Query: 674 ggatgtagaaacccttgtcacccaac 699
|||||||| |||| ||||||||||||
Sbjct: 31 ggatgtagtaacctttgtcacccaac 6
>gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19d07 3', mRNA sequence
Length = 556
Score = 363 bits (183), Expect = 2e-098
Identities = 306/347 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 210 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 269
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 270 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 329
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 330 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 389
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 390 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 449
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 450 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 509
Query: 614 caaatatctcctcctgagcaatcttcatgccgtcctggacatctgag 660
| |||||||||||||| || ||||||||| | ||||| |||||||||
Sbjct: 510 cgaatatctcctcctgggctatcttcatgtcatcctgcacatctgag 556
>gb|BQ764784.1|BQ764784 EBca01_SQ004_L19_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L19 5', mRNA sequence
Length = 432
Score = 363 bits (183), Expect = 2e-098
Identities = 370/431 (85%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 817 ggatcaccaacgacgcgcttcaatgcacgagccttggccttctccacaaactcatcataa 876
||||||||||| || |||||||| ||||||||||| | |||||| |||||||||||||||
Sbjct: 430 ggatcaccaactacacgcttcaaagcacgagcctttgacttctcaacaaactcatcataa 371
Query: 877 acacgctcatgtacaaacgtgcgagatccagcgcagcagcattgtccctggttaaagaac 936
||||||||||| || ||||||||||| ||||||||||||||||| |||||||| || |||
Sbjct: 370 acacgctcatg-acgaacgtgcgagacccagcgcagcagcattgcccctggttgaaaaac 312
Query: 937 agggcaaagtgcgcaagctcaacagcatggtcaacatcagcatcgtccattatgatgaaa 996
|| ||||| ||||||||||||||||| ||||||| ||| ||||| ||||| | ||| |||
Sbjct: 311 agcgcaaaatgcgcaagctcaacagcttggtcaatatctgcatcatccatgacgataaaa 252
Query: 997 ggggacttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagccaactcg 1056
|| ||||||||||||| |||||||||||||| |||||| |||||| ||||| |||||
Sbjct: 251 ggagacttgcctcctagctccagtgtcactgccttaagattgctccgtgcagataactca 192
Query: 1057 agaataatttttccagtatcggtagatccagtaaatgcgatcttatcaacatccatgtga 1116
||||||| ||| ||||||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 191 agaataactttcccagtatcggttgatccagtgaatgcaatcttgtcaacgtccatgtgg 132
Query: 1117 ctagcaagagcagcaccagcagtagggccaaaaccagaaacgacgttcacaacaccctca 1176
| |||||||||||| ||||| ||||| ||||||||||| | || ||||| ||||| ||
Sbjct: 131 ccagcaagagcagccccagcggtaggaccaaaaccagatatgatgttcaggacaccttcg 72
Query: 1177 ggcagtccagcctcatgcaacaatttggagatatacaaagccgatagaggggtttgttca 1236
|| ||||||||||||||||||| || || | ||| | || |||||||| |||||||||
Sbjct: 71 ggtagtccagcctcatgcaacagcttagaaacatagagggcagatagaggagtttgttca 12
Query: 1237 gcagtcttgag 1247
|| ||||||||
Sbjct: 11 gcggtcttgag 1
>gb|AL503399.1|AL503399 AL503399 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02A03T 5', mRNA sequence
Length = 700
Score = 355 bits (179), Expect = 4e-096
Identities = 395/467 (84%)
Strand = Plus / Minus
Query: 1359 ctgtacatggtgtgggccatcagccggcacaatgagcccatggatcttatcagcccaacc 1418
|||||||||||| |||||||||||||| || ||||| ||||||||||| |||| ||| ||
Sbjct: 671 ctgtacatggtgcgggccatcagccggtacgatgaggccatggatcttgtcagtccagcc 612
Query: 1419 agcatagtaacgcataagacgggccaccatgggtacttcaatctgggctgcttgctcata 1478
|||||||| |||||||| || || | ||| || ||||| || ||||| |||||||||||
Sbjct: 611 tgcatagtaccgcataagccgagcaagcattggcacttcgatgtgggcagcttgctcata 552
Query: 1479 tggcttcccgttgtcccatgtctccaaagcagcaagctcgtcattgtgcttctctatcaa 1538
||||||||||||||||| ||||||| ||||||| || |||||||| |||||||||||
Sbjct: 551 gggcttcccgttgtcccacgtctccagtgcagcaatttcatcattgtgtttctctatcaa 492
Query: 1539 atcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttcggccatggccc 1598
||||||||| |||| || || |||||||||||||||||||||||||| |||||||||||
Sbjct: 491 atcagcaaatcgcaaaagaatccgggacctctcataggcagtcatctttggccatggccc 432
Query: 1599 ttcatcaaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctc 1658
|||||| || |||||||| |||||| | |||||||||| || || || || || || ||
Sbjct: 431 ttcatcgaatgccttgcgggccgcaacaactgcacggtcaacatcttcggcatctccttc 372
Query: 1659 agccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccgga 1718
|| |||| | |||||||||||||| || |||||||||||||| ||||| |||||||| ||
Sbjct: 371 agacacacgggcaatcacctccccggtgcgagggtccagagtcgggaaagtcttgccaga 312
Query: 1719 tgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacgg 1778
||| | |||||| || || || || |||||||||| ||| | | ||| ||||| || ||
Sbjct: 311 tgcagcatcaacgaatttgccgttgatgaggagctgtgtctcgcccacttggacagaagg 252
Query: 1779 cgtgatgggctcctctactgctgctgcagtgctgaacctctgaagga 1825
|| |||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 251 cgagatgggttcctctgctgctgctgcagtgccgaacctctgaagga 205
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 121 aggcagcgggagacgagcgaggaggcggccctcc 88
>gb|AV923498.1|AV923498 AV923498 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13f23 5', mRNA sequence
Length = 666
Score = 345 bits (174), Expect = 4e-093
Identities = 406/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 1345 ggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagcccatggatc 1404
|||||||||| | |||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 663 ggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatgaggccatggatc 604
Query: 1405 ttatcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttcaatctgg 1464
|| |||| ||| || |||||||| |||||||| || || | ||| || ||||| || |||
Sbjct: 603 ttgtcagtccagcctgcatagtaccgcataagccgagcaagcattggcacttcgatgtgg 544
Query: 1465 gctgcttgctcatatggcttcccgttgtcccatgtct-ccaaagcagcaagctcgtcatt 1523
|| ||||||||||| ||||||||||||||||| |||| ||| ||||||| || |||||
Sbjct: 543 gcagcttgctcatagggcttcccgttgtcccacgtcttccagtgcagcaatttcatcatt 484
Query: 1524 gtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcat 1583
||| |||||||||||||||||||| |||| || || |||||||||||||||||||||||
Sbjct: 483 gtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggcagtcat 424
Query: 1584 cttcggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtc 1643
||| ||||||||||||||||| || |||||||| |||||| | |||||||||| || ||
Sbjct: 423 ctttggccatggcccttcatcgaatgccttgcgggccgcaacaactgcacggtcaacatc 364
Query: 1644 ctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgg 1703
|| || || || |||| |||| | |||||||||||||| || |||||||||||||| ||
Sbjct: 363 ttcggcatctccttcagacacacgggcaatcacctccccggtgcgagggtccagagtcgg 304
Query: 1704 gaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagtt 1763
||| |||||||| ||||| | |||||| || || || || |||||||||| ||| | |
Sbjct: 303 gaaagtcttgccagatgcagcatcaacgaatttgccgttgatgaggagctgtgtctcgcc 244
Query: 1764 cacatggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaag 1823
||| ||||| || |||| |||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 243 cacttggacagaaggcgagatgggttcctctgctgctgctgcagtgccgaacctctgaag 184
Query: 1824 ga 1825
||
Sbjct: 183 ga 182
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 98 aggcagcgggagacgagcgaggaggcggccctcc 65
>gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17a20 3', mRNA sequence
Length = 586
Score = 343 bits (173), Expect = 2e-092
Identities = 290/329 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 257 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 316
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 317 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 376
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 377 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 436
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 437 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 496
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 497 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 556
Query: 614 caaatatctcctcctgagcaatcttcatg 642
| |||||||||||||| || |||||||||
Sbjct: 557 cgaatatctcctcctgggctatcttcatg 585
>gb|BJ464602.1|BJ464602 BJ464602 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35f16 5', mRNA sequence
Length = 507
Score = 341 bits (172), Expect = 6e-092
Identities = 422/503 (83%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 1081 gatccagtaaatgcgatcttatcaacatccatgtgactagcaagagcagcaccagcagta 1140
|||||||| ||||| ||||| ||||| |||||||| | |||||||||||| ||||| |||
Sbjct: 503 gatccagtgaatgcaatcttgtcaacgtccatgtggccagcaagagcagccccagcggta 444
Query: 1141 gggccaaaaccagaaacgacgttcacaacaccctcaggcagtccagcctcatgcaacaat 1200
|| ||||||||||| | || ||||| ||||| || || |||||||||||||||||||
Sbjct: 443 ggaccaaaaccagatatgatgttcaggacaccttcgggtagtccagcctcatgcaacagc 384
Query: 1201 ttggagatatacaaagccgatagaggggtttgttcagcagtcttgagcacgagagtattt 1260
|| || | ||| | || |||||||| ||||||||||| |||||||| || | ||| ||
Sbjct: 383 ttagaaacatagagggcagatagaggagtttgttcagcggtcttgagaacaatagtgttc 324
Query: 1261 ccacatgccaaagcagggccaactttccaggcaaacatcagaagaggaaagttccatggg 1320
||||| |||||||||||||||||||||||| || |||||| ||| || |||||||| |||
Sbjct: 323 ccacaggccaaagcagggccaactttccagccatacatcaaaagtgggaagttccacggg 264
Query: 1321 atgatctgacctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatca 1380
||||||||||| | || ||||| |||||||||| | |||||||||||| |||||||||
Sbjct: 263 atgatctgacccacgacaccaatcggctcatgcagcacctgtacatggtgcgggccatca 204
Query: 1381 gccggcacaatgagcccatggatcttatcagcccaaccagcatagtaacgcataagacgg 1440
||||| || ||||| ||||||||||| |||| ||| || |||||||| |||||||| ||
Sbjct: 203 gccggtacgatgaggccatggatcttgtcagtccagcctgcatagtaccgcataagccga 144
Query: 1441 gccaccatgggtacttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtc 1500
|| | ||| || ||||| || ||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 143 gcaagcattggcacttcgatgtgggcagcttgctcatagggcttcccgttgtcccacgtc 84
Query: 1501 tccaaagcagcaagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggata 1560
|||| ||||||| || |||||||| |||||||||||||||||||| |||| || ||
Sbjct: 83 tccagtgcagcaatttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatn 24
Query: 1561 c-gggacct-ctcataggcagtc 1581
| ||||||| |||||||||||||
Sbjct: 23 ccgggacctnctcataggcagtc 1
>gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. vulgare cDNA clone HV10E09
5-PRIME, mRNA sequence
Length = 298
Score = 333 bits (168), Expect = 1e-089
Identities = 258/288 (89%)
Strand = Plus / Minus
Query: 339 ggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctccc 398
||||||||||||||| || ||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 294 ggtgacgaccgccttgacttgcaggtagttcttcaggctgtcgatgcccttctccctacc 235
Query: 399 gatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagtt 458
||||||||||||||||||||| || || || ||||| |||||||||| ||| ||||||||
Sbjct: 234 gatgccgctcatcttgtacccgccgaaggggatcgcggcatcgaagatgtcaaagcagtt 175
Query: 459 cacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgtt 518
|||||||| || ||||||||||| || ||||||| ||||||||||||||||||| ||||
Sbjct: 174 cacccagatcgtgccggccctgagggcacgcgtcaaggtgttggccgtgtccaggttgtt 115
Query: 519 ggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcatt 578
|||||| ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct: 114 ggtgaaaacgccggcggccaatccgtactggcttgcgttcgccctcttgatcacctcgtt 55
Query: 579 gaggtctttgaacttgaggatcgactgcacaggcccaaatatctcctc 626
|||||| |||||||||| ||| ||||| |||||||| |||||||||||
Sbjct: 54 gaggtcattgaacttgaagattgactgaacaggcccgaatatctcctc 7
>gb|AV916371.1|AV916371 AV916371 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12o18 5', mRNA sequence
Length = 540
Score = 331 bits (167), Expect = 6e-089
Identities = 415/495 (83%), Gaps = 2/495 (0%)
Strand = Plus / Minus
Query: 1000 gacttgcctcctaactccagtgtcactgtcttaaggttgctctttgcagccaactcgaga 1059
||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||| |||
Sbjct: 536 gacttgcctcctagctccagtgtcactgccttaagattgctccgtgcagataactcaaga 477
Query: 1060 ataatttttccagtatcggtagatccagtaaatgcgatcttatcaacatccatgtgacta 1119
|||| ||| ||||||||||| |||||||| ||||| ||||| ||||| |||||||| | |
Sbjct: 476 ataactttcccagtatcggttgatccagtgaatgcaatcttgtcaacgtccatgtggcca 417
Query: 1120 gcaagagcagcaccagcagtagggccaaaaccagaaacgacgttcacaacaccctcaggc 1179
||||||||||| ||||| ||||| ||||||||||| | || ||||| ||||| || ||
Sbjct: 416 gcaagagcagccccagcggtaggaccaaaaccagatatgatgttcaggacaccttcgggt 357
Query: 1180 agtccagcctcatgcaacaatttggagatatacaaagccgatagaggggtttgttcagca 1239
||||||||||||||||||| || || | ||| | || |||||||| |||||||||||
Sbjct: 356 agtccagcctcatgcaacagcttagaaacatagagggcagatagaggagtttgttcagcg 297
Query: 1240 gtcttgagcacgagagtatttccacatgccaaagcagggccaactttccaggcaaacatc 1299
|||||||| || | ||| || ||||| |||||||||||||||||||||||| || |||||
Sbjct: 296 gtcttgagaacaatagtgttcccacaggccaaagcagggccaactttccagccatacatc 237
Query: 1300 agaagaggaaagttccatgggatgatctgacctgcaactccaattggctcatgcaagatc 1359
| ||| || |||||||| |||||||||||||| | || ||||| |||||||||| | |
Sbjct: 236 aaaagtgggaagttccacgggatgatctgacccacgacaccaatcggctcatgcagcacc 177
Query: 1360 tgtacatggtgtgggccatcagccggcacaatgagcccatggat-cttatcagcccaacc 1418
||||||||||| |||||||||||||| || ||||| |||||||| ||| |||| ||| ||
Sbjct: 176 tgtacatggtgcgggccatcagccggtacgatgaggccatggatncttgtcagtccagcc 117
Query: 1419 agcatagtaacgcataagacgggccaccatgggtacttcaatctgggctgcttgctcata 1478
|||||||| |||||||| || || | ||| || ||||| || ||||| |||||||||||
Sbjct: 116 tgcatagtaccgcataagccgagcaagcattggcacttcgatgtgggcagcttgctcata 57
Query: 1479 tggctt-cccgttgt 1492
||||| ||||||||
Sbjct: 56 gggcttncccgttgt 42
>gb|BF265725.2|BF265725 HV_CEa0013C18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013C18f, mRNA sequence
Length = 763
Score = 327 bits (165), Expect = 9e-088
Identities = 390/465 (83%)
Strand = Plus / Minus
Query: 1361 gtacatggtgtgggccatcagccggcacaatgagcccatggatcttatcagcccaaccag 1420
||||||||| |||||||||||||| | || || ||||||||||| |||| |||||| |
Sbjct: 756 gtacatggtccgggccatcagccggttcgataaggccatggatcttgtcagtccaacctg 697
Query: 1421 catagtaacgcataagacgggccaccatgggtacttcaatctgggctgcttgctcatatg 1480
||||||| |||||||| || || | |||||| ||||| || ||||| ||||||||||| |
Sbjct: 696 catagtaccgcataagccgagcaagcatgggcacttcgatgtgggcagcttgctcatagg 637
Query: 1481 gcttcccgttgtcccatgtctccaaagcagcaagctcgtcattgtgcttctctatcaaat 1540
|||||||||||||||| ||||||| ||||||| || |||||||| ||||| |||||||
Sbjct: 636 gcttcccgttgtcccacgtctccagtgcagcaatttcatcattgtgtttctccatcaaat 577
Query: 1541 cagcaaaccgcagtaggatacgggacctctcataggcagtcatcttcggccatggccctt 1600
||||||| |||| || || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 576 cagcaaatcgcaaaagaatccgggacctctcataggcagtcatctttggccatggccctt 517
Query: 1601 catcaaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcag 1660
|||| || |||||||| |||||| | |||||||||| | || || || || || ||||
Sbjct: 516 catcgaatgccttgcgggccgcaacaactgcacggtccacatcttcggcatctccttcag 457
Query: 1661 ccacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatg 1720
|||| | |||||||||||||| || |||||||||||||| ||||| |||||||| ||||
Sbjct: 456 acacacgggcaatcacctccccggtgcgagggtccagagtcgggaaagtcttgccagatg 397
Query: 1721 cggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcg 1780
| | |||||| || || || || |||||||||| ||| | | ||| ||||| || ||||
Sbjct: 396 cagcatcaacgaatttgccgttgatgaggagctgtgtctcgcccacttggacagaaggcg 337
Query: 1781 tgatgggctcctctactgctgctgcagtgctgaacctctgaagga 1825
|||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 336 agatgggttcctctgctgctgctgcagtgccgaacctctgaagga 292
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 208 aggcagcgggagacgagcgaggaggcggccctcc 175
>gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. vulgare cDNA clone HA02F05
3-PRIME, mRNA sequence
Length = 549
Score = 319 bits (161), Expect = 2e-085
Identities = 266/301 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 249 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 308
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 309 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 368
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 369 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 428
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 429 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 488
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 489 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 548
Query: 614 c 614
|
Sbjct: 549 c 549
>gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59I04
5-PRIME, mRNA sequence
Length = 374
Score = 319 bits (161), Expect = 2e-085
Identities = 266/301 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 74 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 133
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 134 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 193
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 194 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 253
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 254 aggtgttggccgtgtccaggttgttggtgaaaacgccggcggccaatccgtactggcttg 313
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggcc 613
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||||
Sbjct: 314 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggcc 373
Query: 614 c 614
|
Sbjct: 374 c 374
>gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084A24f, mRNA sequence
Length = 628
Score = 309 bits (156), Expect = 2e-082
Identities = 246/276 (89%)
Strand = Plus / Minus
Query: 339 ggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctccc 398
||||||||||||||| || ||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 280 ggtgacgaccgccttgacttgcaggtagttcttcaggctgtcgatgcccttctccctacc 221
Query: 399 gatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagtt 458
||||||||||||||||||||| || || || ||||| |||||||||| ||| ||||||||
Sbjct: 220 gatgccgctcatcttgtacccgccgaaggggatcgcggcatcgaagatgtcaaagcagtt 161
Query: 459 cacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgtt 518
|||||||| || ||||||||||| || ||||||| ||||||||||||||||||| ||||
Sbjct: 160 cacccagatcgtgccggccctgagggcacgcgtcaaggtgttggccgtgtccaggttgtt 101
Query: 519 ggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcatt 578
||| || ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct: 100 ggtaaaaacgccggcggccaatccgtactggcttgcgttcgccctcttgatcacctcgtt 41
Query: 579 gaggtctttgaacttgaggatcgactgcacaggccc 614
|||||| |||||||||| ||| ||||| ||||||||
Sbjct: 40 gaggtcattgaacttgaagattgactgaacaggccc 5
>gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42a08 3', mRNA sequence
Length = 557
Score = 307 bits (155), Expect = 8e-082
Identities = 263/299 (87%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 259 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 318
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 319 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 378
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 379 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 438
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 439 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 498
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacaggc 612
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| ||||||
Sbjct: 499 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacaggc 557
>gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e14 3', mRNA sequence
Length = 530
Score = 305 bits (154), Expect = 3e-081
Identities = 262/298 (87%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 233 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 292
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 293 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 352
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 353 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 412
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggctcg 553
||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |
Sbjct: 413 aggtgttggccgtgtccaggttgttggtaaaaacgccggcggccaatccgtactggcttg 472
Query: 554 cgtttgccctcttgataacctcattgaggtctttgaacttgaggatcgactgcacagg 611
|||| ||||||||||| ||||| |||||||| |||||||||| ||| ||||| |||||
Sbjct: 473 cgttcgccctcttgatcacctcgttgaggtcattgaacttgaagattgactgaacagg 530
>gb|AL508406.1|AL508406 AL508406 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08K19V 5',
mRNA sequence
Length = 700
Score = 287 bits (145), Expect = 8e-076
Identities = 316/373 (84%)
Strand = Plus / Minus
Query: 1453 acttcaatctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagca 1512
||||| || ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||
Sbjct: 671 acttcgatgtgggcagcttgctcatagggcttcccgttgtcccacgtctccagtgcagca 612
Query: 1513 agctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctca 1572
| || |||||||| |||||||||||||||||||| |||| || || ||||||||||||
Sbjct: 611 atttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctca 552
Query: 1573 taggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactgca 1632
|||||||||||||| ||||||||||||||||| || |||||||| |||||| | ||||||
Sbjct: 551 taggcagtcatctttggccatggcccttcatcgaatgccttgcgggccgcaacaactgca 492
Query: 1633 cggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgaggg 1692
|||| || || || || || || |||| |||| | |||||||||||||| || ||||||
Sbjct: 491 cggtcaacatcttcggcatctccttcagacacacgggcaatcacctccccggtgcgaggg 432
Query: 1693 tccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggagc 1752
|||||||| ||||| |||||||| ||||| | |||||| || || || || |||||||||
Sbjct: 431 tccagagtcgggaaagtcttgccagatgcagcatcaacgaatttgccgttgatgaggagc 372
Query: 1753 tttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgctg 1812
| ||| | | ||| ||||| || |||| |||||| |||||| ||||||||||||||| |
Sbjct: 371 tgtgtctcgcccacttggacagaaggcgagatgggttcctctgctgctgctgcagtgccg 312
Query: 1813 aacctctgaagga 1825
|||||||||||||
Sbjct: 311 aacctctgaagga 299
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 215 aggcagcgggagacgagcgaggaggcggccctcc 182
>gb|AL508201.1|AL508201 AL508201 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08B04V 5',
mRNA sequence
Length = 699
Score = 274 bits (138), Expect = 1e-071
Identities = 316/374 (84%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 1453 acttcaatctgggctgcttgct-catatggcttcccgttgtcccatgtctccaaagcagc 1511
||||| || ||||| ||||||| |||| ||||||||||||||||| ||||||| |||||
Sbjct: 651 acttcgatgtgggcagcttgcttcatagggcttcccgttgtcccacgtctccagtgcagc 592
Query: 1512 aagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctc 1571
|| || |||||||| |||||||||||||||||||| |||| || || |||||||||||
Sbjct: 591 aatttcatcattgtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctc 532
Query: 1572 ataggcagtcatcttcggccatggcccttcatcaaaagccttgcgagccgcagctactgc 1631
||||||||||||||| ||||||||||||||||| || |||||||| |||||| | |||||
Sbjct: 531 ataggcagtcatctttggccatggcccttcatcgaatgccttgcgggccgcaacaactgc 472
Query: 1632 acggttaatgtcctctgcgtcaccctcagccacatgagcaatcacctcccctgtacgagg 1691
||||| || || || || || || |||| |||| | |||||||||||||| || |||||
Sbjct: 471 acggtcaacatcttcggcatctccttcagacacacgggcaatcacctccccggtgcgagg 412
Query: 1692 gtccagagttgggaaggtcttgccggatgcggaatcaacaaagttcccattaatgaggag 1751
||||||||| ||||| |||||||| ||||| | |||||| || || || || ||||||||
Sbjct: 411 gtccagagtcgggaaagtcttgccagatgcagcatcaacgaatttgccgttgatgaggag 352
Query: 1752 ctttgtgtagttcacatggactgacggcgtgatgggctcctctactgctgctgcagtgct 1811
|| ||| | | ||| ||||| || |||| |||||| |||||| |||||||||||||||
Sbjct: 351 ctgtgtctcgcccacttggacagaaggcgagatgggttcctctgctgctgctgcagtgcc 292
Query: 1812 gaacctctgaagga 1825
||||||||||||||
Sbjct: 291 gaacctctgaagga 278
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 194 aggcagcgggagacgagcgaggaggcggccctcc 161
>gb|BI950769.1|BI950769 HVSMEl0023C05f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0023C05f, mRNA sequence
Length = 982
Score = 274 bits (138), Expect = 1e-071
Identities = 303/358 (84%)
Strand = Plus / Minus
Query: 1468 gcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcgtcattgtgc 1527
||||||||||| ||||||||||||||||| ||||||| ||||||| || ||||||||
Sbjct: 642 gcttgctcatagggcttcccgttgtcccacgtctccagtgcagcaatttcatcattgtgt 583
Query: 1528 ttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 1587
|||||||||||||||||||| |||| || || ||||||||||||||||||||||||||
Sbjct: 582 ttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggcagtcatcttt 523
Query: 1588 ggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtcctct 1647
||||||||||||||||| || |||||||| |||||| | |||||||||| | || ||
Sbjct: 522 ggccatggcccttcatcgaatgccttgcgggccgcaacaactgcacggtccacatcttcg 463
Query: 1648 gcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 1707
|| || || |||| |||| | |||||||||||||| || |||||||||||||| |||||
Sbjct: 462 gcatctccttcagacacacgggcaatcacctccccggtgcgagggtccagagtcgggaaa 403
Query: 1708 gtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcaca 1767
|||||||| ||||| | |||||| || || || || |||||||||| ||| | | |||
Sbjct: 402 gtcttgccagatgcagcatcaacgaatttgccgttgatgaggagctgtgtctcgcccact 343
Query: 1768 tggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaagga 1825
||||| || |||| |||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 342 tggacagaaggcgagatgggttcctctgctgctgctgcagtgccgaacctctgaagga 285
Score = 44.1 bits (22), Expect = 0.020
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1360 tgtacatggtgtgggccatcagccgg 1385
||||||||||| ||||||||||||||
Sbjct: 750 tgtacatggtgcgggccatcagccgg 725
>gb|AV926388.1|AV926388 AV926388 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd19d07 5', mRNA sequence
Length = 625
Score = 266 bits (134), Expect = 3e-069
Identities = 303/358 (84%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 1469 cttgctcatatggcttcccgttgtcccatgtctccaaa-gcagcaagctcgtcattgtgc 1527
|||||||||| ||||||||||||||||| |||||| | ||||||| || ||||||||
Sbjct: 625 cttgctcatagggcttcccgttgtcccacgtctcccagtgcagcaatttcatcattgtgt 566
Query: 1528 ttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggcagtcatcttc 1587
|||||||||||||||||||| |||| || || ||||||||||||||||||||||||||
Sbjct: 565 ttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggcagtcatcttt 506
Query: 1588 ggccatggcccttcatcaaaagccttgcgagccgcagctactgcacggttaatgtcctct 1647
||||||||||||||||| || |||||||| |||||| | |||||||||| || || ||
Sbjct: 505 ggccatggcccttcatcgaatgccttgcgggccgcaacaactgcacggtcaacatcttcg 446
Query: 1648 gcgtcaccctcagccacatgagcaatcacctcccctgtacgagggtccagagttgggaag 1707
|| || || |||| |||| | |||||||||||||| || |||||||||||||| |||||
Sbjct: 445 gcatctccttcagacacacgggcaatcacctccccggtgcgagggtccagagtcgggaaa 386
Query: 1708 gtcttgccggatgcggaatcaacaaagttcccattaatgaggagctttgtgtagttcaca 1767
|||||||| ||||| | |||||| || || || || |||||||||| ||| | | |||
Sbjct: 385 gtcttgccagatgcagcatcaacgaatttgccgttgatgaggagctgtgtctcgcccact 326
Query: 1768 tggactgacggcgtgatgggctcctctactgctgctgcagtgctgaacctctgaagga 1825
||||| || |||| |||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 325 tggacagaaggcgagatgggttcctctgctgctgctgcagtgccgaacctctgaagga 268
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 184 aggcagcgggagacgagcgaggaggcggccctcc 151
>gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35f16 3', mRNA sequence
Length = 480
Score = 252 bits (127), Expect = 4e-065
Identities = 210/238 (88%)
Strand = Plus / Plus
Query: 314 acaaccacgcggcgttcttgattggggtgacgaccgccttcacctgcaggtagttcttca 373
|||||||||| | |||||| | | ||||||||||||||| || ||||||||||||||||
Sbjct: 242 acaaccacgcagggttcttaagcgcggtgacgaccgccttgacttgcaggtagttcttca 301
Query: 374 ggctgtcaacgcccttctccctcccgatgccgctcatcttgtacccaccaaacggaatcg 433
||||||| | |||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 302 ggctgtcgatgcccttctccctaccgatgccgctcatcttgtacccgccgaaggggatcg 361
Query: 434 cagcatcgaagacgtcgaagcagttcacccagacggtcccggccctgagcgcgcgcgtca 493
| |||||||||| ||| |||||||||||||||| || ||||||||||| || |||||||
Sbjct: 362 cggcatcgaagatgtcaaagcagttcacccagatcgtgccggccctgagggcacgcgtca 421
Query: 494 gggtgttggccgtgtccaggctgttggtgaacacgccggcggccaatccatactggct 551
||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||
Sbjct: 422 aggtgttggccgtgtccaggttgttggtgaaaacgccggcngccaatccgtactggct 479
>gb|BG368642.2|BG368642 HVSMEi0020B04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020B04f, mRNA sequence
Length = 708
Score = 228 bits (115), Expect = 6e-058
Identities = 292/347 (84%), Gaps = 3/347 (0%)
Strand = Plus / Minus
Query: 1261 ccacatgccaaagcagggccaactttccaggcaaacatcagaagaggaaagttccatggg 1320
||||| |||||||||||||||||||||||| || |||||| ||| || |||||||| |||
Sbjct: 351 ccacaggccaaagcagggccaactttccagccatacatcaaaagtgggaagttccacggg 292
Query: 1321 atgatctgacctgcaactccaattggctcatgcaagatctgtacatggtgtgggccatca 1380
||||| ||||| | || || || ||||||| || | |||||||||||| |||||||||
Sbjct: 291 atgatttgacccacgacacccatcggctcattcagcacctgtacatggtgcgggccatca 232
Query: 1381 gccggcacaatgagcccatggatcttatcagcccaacca-gcatag-taacgcataagac 1438
|||| || ||||| ||||||||||| |||| ||| || |||||| || |||||||| |
Sbjct: 231 accggtacgatgaggccatggatcttgtcagtccagccctgcataggtaccgcataagcc 172
Query: 1439 gggccaccatgggtacttc-aatctgggctgcttgctcatatggcttcccgttgtcccat 1497
| || | ||| || ||||| ||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 171 gagcaagcattggcacttcgaatgtgggcagcttgctcatagggcttcccgttgtcccac 112
Query: 1498 gtctccaaagcagcaagctcgtcattgtgcttctctatcaaatcagcaaaccgcagtagg 1557
||||||| | ||||| || ||| |||| |||||||||||||||||||| |||| ||
Sbjct: 111 gtctccagtgaagcaatttcatcagtgtgtttctctatcaaatcagcaaatcgcaaaaga 52
Query: 1558 atacgggacctctcataggcagtcatcttcggccatggcccttcatc 1604
|| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 51 atccgggacctctcataggcagtcatctttggccatggcccttcatc 5
>gb|BF626810.3|BF626810 HVSMEb0001G09f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0001G09f, mRNA sequence
Length = 886
Score = 214 bits (108), Expect = 9e-054
Identities = 286/344 (83%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1483 ttcccgttgtccc-atgtctccaaagcagcaagctcgtcattgtgcttctctatcaaatc 1541
||||||||||||| | ||||||| ||||||| || |||||||| ||||||| ||||||
Sbjct: 592 ttcccgttgtccccacgtctccagtgcagcaatttcatcattgtgtttctctaccaaatc 533
Query: 1542 agcaaaccgcagtaggatacgggacctctcataggcagtcatcttcggccatggcccttc 1601
|||| | |||| || || |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 532 agcagatcgcaaaagaatccgggacctctcataggcagtcatctttggccatggcctttc 473
Query: 1602 atcaaaagccttgcgagccgcagctactgcacggttaatgtcctctgcgtcaccctcagc 1661
||| || |||||||| |||||| | |||||||||| | || || || || || ||||
Sbjct: 472 atcgaatgccttgcgggccgcaacaactgcacggtccacatcttcggcatctccttcaga 413
Query: 1662 cacatgagcaatcacctcccctgtacgagggtccagagttgggaaggtcttgccggatgc 1721
|||| | |||||||||||||| || |||||||||||||| ||||| |||||||| |||||
Sbjct: 412 cacacgggcaatcacctccccggtgcgagggtccagagtcgggaaagtcttgccagatgc 353
Query: 1722 ggaatcaacaaagttcccattaatgaggagctttgtgtagttcacatggactgacggcgt 1781
| |||||| || || || || |||||||||| ||| | | ||| ||||| || ||||
Sbjct: 352 agcatcaacgaatttgccgttgatgaggagctgtgtctcgcccacttggacagaaggcga 293
Query: 1782 gatgggctcctctactgctgctgcagtgctgaacctctgaagga 1825
|||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 292 gatgggttcctctgctgctgctgcagtgccgaacctctgaagga 249
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1921 aggcagcgggagacgagcgaggacgcggccctcc 1954
||||||||||||||||||||||| ||||||||||
Sbjct: 165 aggcagcgggagacgagcgaggaggcggccctcc 132
>gb|BQ739998.1|BQ739998 HC01D04 HC Hordeum vulgare subsp. vulgare cDNA clone HC01D04 similar
to mitochondrial aldehyde dehydrogenase ALDH2 [Hordeum
vulgare], mRNA sequence
Length = 255
Score = 214 bits (108), Expect = 9e-054
Identities = 213/248 (85%)
Strand = Plus / Minus
Query: 1339 ccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagccca 1398
||||| |||||||||| | |||||||||||| |||||||||||||| || ||||| |||
Sbjct: 251 ccaatcggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatgaggcca 192
Query: 1399 tggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttca 1458
|||||||| |||| ||| || |||||||| |||||||| || || | ||| || |||||
Sbjct: 191 tggatcttgtcagtccagcctgcatagtaccgcataagccgagcaagcattggcacttcg 132
Query: 1459 atctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcg 1518
|| ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| ||
Sbjct: 131 atgtgggcagcttgctcatagggcttcccgttgtcccacgtctccagtgcagcaatttca 72
Query: 1519 tcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggca 1578
|||||||| |||||||||||||||||||| |||| || || ||||||||||||||||||
Sbjct: 71 tcattgtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggca 12
Query: 1579 gtcatctt 1586
||||||||
Sbjct: 11 gtcatctt 4
>gb|BQ739999.1|BQ739999 HC01D06 HC Hordeum vulgare subsp. vulgare cDNA clone HC01D06 similar
to mitochondrial aldehyde dehydrogenase ALDH2 [Hordeum
vulgare], mRNA sequence
Length = 255
Score = 214 bits (108), Expect = 9e-054
Identities = 213/248 (85%)
Strand = Plus / Minus
Query: 1339 ccaattggctcatgcaagatctgtacatggtgtgggccatcagccggcacaatgagccca 1398
||||| |||||||||| | |||||||||||| |||||||||||||| || ||||| |||
Sbjct: 251 ccaatcggctcatgcagcacctgtacatggtgcgggccatcagccggtacgatgaggcca 192
Query: 1399 tggatcttatcagcccaaccagcatagtaacgcataagacgggccaccatgggtacttca 1458
|||||||| |||| ||| || |||||||| |||||||| || || | ||| || |||||
Sbjct: 191 tggatcttgtcagtccagcctgcatagtaccgcataagccgagcaagcattggcacttcg 132
Query: 1459 atctgggctgcttgctcatatggcttcccgttgtcccatgtctccaaagcagcaagctcg 1518
|| ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| ||
Sbjct: 131 atgtgggcagcttgctcatagggcttcccgttgtcccacgtctccagtgcagcaatttca 72
Query: 1519 tcattgtgcttctctatcaaatcagcaaaccgcagtaggatacgggacctctcataggca 1578
|||||||| |||||||||||||||||||| |||| || || ||||||||||||||||||
Sbjct: 71 tcattgtgtttctctatcaaatcagcaaatcgcaaaagaatccgggacctctcataggca 12
Query: 1579 gtcatctt 1586
||||||||
Sbjct: 11 gtcatctt 4
>gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017B23f, mRNA sequence
Length = 853
Score = 210 bits (106), Expect = 1e-052
Identities = 211/246 (85%)
Strand = Plus / Minus
Query: 339 ggtgacgaccgccttcacctgcaggtagttcttcaggctgtcaacgcccttctccctccc 398
||||| |||||| || || ||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 299 ggtgaagaccgctttgacttgcaggtagttcttcaggctgtcgatgcccttctccctacc 240
Query: 399 gatgccgctcatcttgtacccaccaaacggaatcgcagcatcgaagacgtcgaagcagtt 458
|| ||||||||||||||||| || || || ||||| |||| ||||| ||| ||||||||
Sbjct: 239 gagtccgctcatcttgtacccgccgaaggggatcgcggcattgaagatgtcaaagcagtt 180
Query: 459 cacccagacggtcccggccctgagcgcgcgcgtcagggtgttggccgtgtccaggctgtt 518
|||||||| || |||||| | || || ||||||| ||||||||||||||||||| ||||
Sbjct: 179 cacccagatcgtgccggcctttagggcacgcgtcaaggtgttggccgtgtccaggttgtt 120
Query: 519 ggtgaacacgccggcggccaatccatactggctcgcgtttgccctcttgataacctcatt 578
||| || ||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| |
Sbjct: 119 ggtaaaaacgccggcggccaatccgtactggctagcgttagccctattgatcacctcgta 60
Query: 579 gaggtc 584
||||||
Sbjct: 59 gaggtc 54
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 235,918
Number of Sequences: 312970
Number of extensions: 235918
Number of successful extensions: 64414
Number of sequences better than 0.5: 67
Number of HSP's better than 0.5 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64237
Number of HSP's gapped (non-prelim): 148
length of query: 2214
length of database: 175,134,539
effective HSP length: 20
effective length of query: 2194
effective length of database: 168,875,139
effective search space: 370512054966
effective search space used: 370512054966
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)