BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.387
(908 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 107 6e-022
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 107 6e-022
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 107 6e-022
gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. v... 107 6e-022
gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike... 100 2e-019
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 76 2e-012
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 76 2e-012
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 76 2e-012
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 76 2e-012
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 76 2e-012
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 76 2e-012
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 76 2e-012
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 76 2e-012
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 76 2e-012
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 76 2e-012
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 76 2e-012
gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa... 76 2e-012
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 76 2e-012
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 76 2e-012
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 76 2e-012
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 76 2e-012
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 76 2e-012
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 76 2e-012
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 76 2e-012
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 76 2e-012
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 76 2e-012
gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. v... 76 2e-012
gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. v... 76 2e-012
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 76 2e-012
gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. v... 76 2e-012
gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. v... 76 2e-012
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 76 2e-012
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 74 9e-012
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 72 4e-011
gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Le... 72 4e-011
gb|BI949249.1|BI949249 HVSMEl0013A02f Hordeum vulgare spike... 72 4e-011
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 72 4e-011
gb|BI951463.1|BI951463 HVSMEm0001A11f Hordeum vulgare green... 72 4e-011
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 72 4e-011
gb|BI953910.1|BI953910 HVSMEm0015F08f Hordeum vulgare green... 72 4e-011
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 72 4e-011
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 72 4e-011
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 72 4e-011
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 72 4e-011
gb|BF265236.1|BF265236 HV_CEa0011O17f Hordeum vulgare seedl... 72 4e-011
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 72 4e-011
gb|BF262973.2|BF262973 HV_CEa0005H11f Hordeum vulgare seedl... 72 4e-011
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 72 4e-011
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 72 4e-011
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 72 4e-011
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 72 4e-011
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 72 4e-011
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 72 4e-011
gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA li... 72 4e-011
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 72 4e-011
gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA li... 72 4e-011
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 72 4e-011
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 72 4e-011
gb|BM444141.1|BM444141 EBem09_SQ004_E15_R embryo, 1 Day ger... 72 4e-011
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 72 4e-011
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 72 4e-011
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 72 4e-011
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 72 4e-011
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 72 4e-011
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 72 4e-011
gb|CB858429.1|CB858429 HI06P17w HI Hordeum vulgare subsp. v... 72 4e-011
gb|CB877034.1|CB877034 HP03F07T HP Hordeum vulgare subsp. v... 72 4e-011
gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. v... 72 4e-011
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 72 4e-011
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 72 4e-011
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 70 1e-010
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 68 5e-010
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 68 5e-010
gb|BE422349.1|BE422349 HWM023cB.11r ITEC HWM Barley Leaf Li... 66 2e-009
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 66 2e-009
gb|BF257510.3|BF257510 HVSMEf0013B19f Hordeum vulgare seedl... 66 2e-009
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 66 2e-009
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 66 2e-009
gb|AV935825.1|AV935825 AV935825 K. Sato unpublished cDNA li... 66 2e-009
gb|BQ659497.1|BQ659497 HE01J14u HE Hordeum vulgare subsp. v... 66 2e-009
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 64 9e-009
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 64 9e-009
gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedl... 64 9e-009
gb|BI947443.1|BI947443 HVSMEl0005H24f Hordeum vulgare spike... 64 9e-009
gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike... 64 9e-009
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 64 9e-009
gb|BI954227.1|BI954227 HVSMEm0016L11f Hordeum vulgare green... 64 9e-009
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 64 9e-009
gb|BI955968.1|BI955968 HVSMEm0025D17f Hordeum vulgare green... 64 9e-009
gb|BE559371.1|BE559371 HV_CEb0024F08f Hordeum vulgare seedl... 64 9e-009
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 64 9e-009
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 64 9e-009
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 64 9e-009
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 64 9e-009
gb|BF266125.2|BF266125 HV_CEa0014D24f Hordeum vulgare seedl... 64 9e-009
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 64 9e-009
gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedl... 64 9e-009
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 64 9e-009
gb|AV925874.1|AV925874 AV925874 K. Sato unpublished cDNA li... 64 9e-009
gb|CA003742.1|CA003742 HS15G18r HS Hordeum vulgare subsp. v... 64 9e-009
gb|CA019311.1|CA019311 HV11J14r HV Hordeum vulgare subsp. v... 64 9e-009
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 64 9e-009
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 64 9e-009
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 64 9e-009
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 64 9e-009
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 64 9e-009
gb|BI950475.1|BI950475 HVSMEl0020N24f Hordeum vulgare spike... 62 3e-008
gb|CA009849.1|CA009849 HT12N24u HT Hordeum vulgare subsp. v... 62 3e-008
gb|AV931076.1|AV931076 AV931076 K. Sato unpublished cDNA li... 60 1e-007
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 58 5e-007
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 56 2e-006
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 56 2e-006
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 56 2e-006
gb|BG369819.1|BG369819 HVSMEi0026C13f Hordeum vulgare 20 DA... 56 2e-006
gb|BI954355.1|BI954355 HVSMEm0017G10f Hordeum vulgare green... 56 2e-006
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 56 2e-006
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 56 2e-006
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 56 2e-006
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 56 2e-006
gb|BG365745.2|BG365745 HVSMEi0004A12f Hordeum vulgare 20 DA... 56 2e-006
gb|BG365754.2|BG365754 HVSMEi0004B04f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366607.2|BG366607 HVSMEi0007J19f Hordeum vulgare 20 DA... 56 2e-006
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 54 8e-006
gb|BG369545.2|BG369545 HVSMEi0024N21f Hordeum vulgare 20 DA... 54 8e-006
gb|AL450510.1|AL450510 AL450510 Hordeum vulgare Barke etiol... 52 3e-005
gb|BE601801.2|BE601801 HVSMEh0099J11f Hordeum vulgare 5-45 ... 52 3e-005
gb|BG368322.1|BG368322 HVSMEi0017L06f Hordeum vulgare 20 DA... 52 3e-005
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 52 3e-005
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 52 3e-005
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 52 3e-005
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 52 3e-005
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 52 3e-005
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 52 3e-005
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ544555.1|BJ544555 BJ544555 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 52 3e-005
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 52 3e-005
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 52 3e-005
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 50 1e-004
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 50 1e-004
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 50 1e-004
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 50 1e-004
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 50 1e-004
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 50 1e-004
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 50 1e-004
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 50 1e-004
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 50 1e-004
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 50 1e-004
gb|BM371568.2|BM371568 EBma08_SQ003_D15_R maternal, 28 DPA,... 50 1e-004
gb|BM371738.2|BM371738 EBma08_SQ003_M12_R maternal, 28 DPA,... 50 1e-004
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 50 1e-004
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 50 1e-004
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 50 1e-004
gb|CA012410.1|CA012410 HT05F17r HT Hordeum vulgare subsp. v... 50 1e-004
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 50 1e-004
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 50 1e-004
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 50 1e-004
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 50 1e-004
gb|CA018351.1|CA018351 HV08G01r HV Hordeum vulgare subsp. v... 50 1e-004
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 50 1e-004
emb|AJ400137.1|HVU400137 Hordeum vulgare subsp. vulgare par... 50 1e-004
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 48 5e-004
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 48 5e-004
gb|BG366254.1|BG366254 HVSMEi0006G16f Hordeum vulgare 20 DA... 48 5e-004
gb|BE215793.1|BE215793 HV_CEb0008I03f Hordeum vulgare seedl... 48 5e-004
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 48 5e-004
gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DA... 48 5e-004
gb|BF265189.3|BF265189 HV_CEa0011I10f Hordeum vulgare seedl... 48 5e-004
gb|BQ755873.1|BQ755873 EBed07_SQ003_G24_R endosperm, 28 DPA... 48 5e-004
gb|BG365956.1|BG365956 HVSMEi0005I01f Hordeum vulgare 20 DA... 46 0.002
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 46 0.002
gb|BG366793.2|BG366793 HVSMEi0008F20f Hordeum vulgare 20 DA... 46 0.002
gb|BG368641.2|BG368641 HVSMEi0020B02f Hordeum vulgare 20 DA... 46 0.002
gb|BG369571.2|BG369571 HVSMEi0024P21f Hordeum vulgare 20 DA... 46 0.002
gb|BF620099.2|BF620099 HVSMEc0011P11f Hordeum vulgare seedl... 44 0.008
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 44 0.008
gb|BF259671.3|BF259671 HVSMEf0019P07f Hordeum vulgare seedl... 44 0.008
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 44 0.008
gb|BM372862.1|BM372862 EBma04_SQ002_D08_R maternal, 10 DPA,... 44 0.008
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 44 0.008
gb|AV909683.1|AV909683 AV909683 K. Sato unpublished cDNA li... 44 0.008
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 44 0.008
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 44 0.008
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 44 0.008
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 42 0.031
gb|BG367092.2|BG367092 HVSMEi0010E09f Hordeum vulgare 20 DA... 42 0.031
gb|BM368822.1|BM368822 EBem08_SQ004_L06_R embryo, 40 DPA, n... 42 0.031
gb|AV924171.1|AV924171 AV924171 K. Sato unpublished cDNA li... 42 0.031
gb|BJ546257.1|BJ546257 BJ546257 K. Sato unpublished cDNA li... 42 0.031
gb|BI954854.1|BI954854 HVSMEm0020B05f Hordeum vulgare green... 40 0.12
gb|BG369058.2|BG369058 HVSMEi0021J04f Hordeum vulgare 20 DA... 40 0.12
gb|BM371578.2|BM371578 EBma08_SQ003_E01_R maternal, 28 DPA,... 40 0.12
gb|BQ755243.1|BQ755243 EBed07_SQ002_G06_R endosperm, 28 DPA... 40 0.12
gb|CA018205.1|CA018205 HV07O23r HV Hordeum vulgare subsp. v... 40 0.12
gb|CA019044.1|CA019044 HV10J02r HV Hordeum vulgare subsp. v... 40 0.12
gb|BG299450.2|BG299450 HVSMEa0020B12f Hordeum vulgare seedl... 38 0.49
gb|BF620821.2|BF620821 HVSMEc0020P04f Hordeum vulgare seedl... 38 0.49
gb|BE195941.2|BE195941 HVSMEh0090O16f Hordeum vulgare 5-45 ... 38 0.49
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 38 0.49
gb|BG367660.2|BG367660 HVSMEi0013B21f Hordeum vulgare 20 DA... 38 0.49
gb|BM097181.2|BM097181 EBpi07_SQ002_K16_R pistil, 12 DPA, n... 38 0.49
gb|CA011984.1|CA011984 HT04B14r HT Hordeum vulgare subsp. v... 38 0.49
>gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009E13f, mRNA sequence
Length = 617
Score = 107 bits (54), Expect = 6e-022
Identities = 138/166 (83%)
Strand = Plus / Minus
Query: 455 ccgcactctagaccaccgttgatgatgttcgtggtcaggccgtatccggggagcctcccc 514
|||||||| || ||||||||||||||||| ||| ||| |||||| || || | ||||||
Sbjct: 278 ccgcactcgagcccaccgttgatgatgttggtgatcacgccgtacccaggaaccctccct 219
Query: 515 gcggcgcggtcggtggcggagggcctccagtcgccggtcatcacggcgtggcacgagggc 574
|| || |||||||| | ||||| ||||| |||||| |||||| |||||| ||| ||
Sbjct: 218 gccgcctggtcggtgcccgaggggctccaccggccggtgatcacgtcgtggctcgaaggt 159
Query: 575 ttgggcgactgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 158 ttgggtgactgcggcgtcatccagaaccacaacgccgtcttgaagg 113
>gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 5', mRNA sequence
Length = 540
Score = 107 bits (54), Expect = 6e-022
Identities = 138/166 (83%)
Strand = Plus / Minus
Query: 455 ccgcactctagaccaccgttgatgatgttcgtggtcaggccgtatccggggagcctcccc 514
|||||||| || ||||||||||||||||| ||| ||| |||||| || || | ||||||
Sbjct: 255 ccgcactcgagcccaccgttgatgatgttggtgatcacgccgtacccaggcaccctccct 196
Query: 515 gcggcgcggtcggtggcggagggcctccagtcgccggtcatcacggcgtggcacgagggc 574
|| || |||||||| | ||||| ||||| |||||| |||||| |||||| ||| ||
Sbjct: 195 gccgcctggtcggtgcccgaggggctccaccggccggtgatcacgtcgtggctcgaaggt 136
Query: 575 ttgggcgactgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 135 ttgggtgactgcggcgtcatccagaaccacaacgccgtcttgaagg 90
>gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 3', mRNA sequence
Length = 534
Score = 107 bits (54), Expect = 6e-022
Identities = 138/166 (83%)
Strand = Plus / Plus
Query: 455 ccgcactctagaccaccgttgatgatgttcgtggtcaggccgtatccggggagcctcccc 514
|||||||| || ||||||||||||||||| ||| ||| |||||| || || | ||||||
Sbjct: 280 ccgcactcgagcccaccgttgatgatgttggtgatcacgccgtacccaggcaccctccct 339
Query: 515 gcggcgcggtcggtggcggagggcctccagtcgccggtcatcacggcgtggcacgagggc 574
|| || |||||||| | ||||| ||||| |||||| |||||| |||||| ||| ||
Sbjct: 340 gccgcctggtcggtgcccgaggggctccaccggccggtgatcacgtcgtggctcgaaggt 399
Query: 575 ttgggcgactgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 400 ttgggtgactgcggcgtcatccagaaccacaacgccgtcttgaagg 445
>gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42J20
5-PRIME, mRNA sequence
Length = 507
Score = 107 bits (54), Expect = 6e-022
Identities = 138/166 (83%)
Strand = Plus / Plus
Query: 455 ccgcactctagaccaccgttgatgatgttcgtggtcaggccgtatccggggagcctcccc 514
|||||||| || ||||||||||||||||| ||| ||| |||||| || || | ||||||
Sbjct: 285 ccgcactcgagcccaccgttgatgatgttggtgatcacgccgtacccaggcaccctccct 344
Query: 515 gcggcgcggtcggtggcggagggcctccagtcgccggtcatcacggcgtggcacgagggc 574
|| || |||||||| | ||||| ||||| |||||| |||||| |||||| ||| ||
Sbjct: 345 gccgcctggtcggtgcccgaggggctccaccggccggtgatcacgtcgtggctcgaaggt 404
Query: 575 ttgggcgactgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 405 ttgggtgactgcggcgtcatccagaaccacaacgccgtcttgaagg 450
>gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005L16f, mRNA sequence
Length = 505
Score = 99.6 bits (50), Expect = 2e-019
Identities = 137/166 (82%)
Strand = Plus / Plus
Query: 455 ccgcactctagaccaccgttgatgatgttcgtggtcaggccgtatccggggagcctcccc 514
|||||||| || ||||||||||||||||| ||| ||| |||||| || || | ||||||
Sbjct: 317 ccgcactcgagcccaccgttgatgatgttggtgatcacgccgtacccaggaaccctccct 376
Query: 515 gcggcgcggtcggtggcggagggcctccagtcgccggtcatcacggcgtggcacgagggc 574
|| || |||||||| | ||||| ||||| |||||| |||||| |||||| ||| ||
Sbjct: 377 gccgcctggtcggtgcccgaggggctccaccggccggtgatcacgtcgtggctcgaaggt 436
Query: 575 ttgggcgactgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||||| ||||| | |||||||||||||
Sbjct: 437 ttgggtgactgcggcgtcatccaaaaccacaacgccgtcttgaagg 482
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 370 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 429
Query: 614 tt 615
||
Sbjct: 430 tt 431
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 553 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 494
Query: 614 tt 615
||
Sbjct: 493 tt 492
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 293 gcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtg 234
Query: 832 ggacgtctggccgaagaaggcggc 855
||| |||||| | | |||||||||
Sbjct: 233 ggaggtctgggccaggaaggcggc 210
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 265 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 206
Query: 614 tt 615
||
Sbjct: 205 tt 204
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 245 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 186
Query: 614 tt 615
||
Sbjct: 185 tt 184
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 369 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 310
Query: 614 tt 615
||
Sbjct: 309 tt 308
Score = 48.1 bits (24), Expect = 5e-004
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 109 gcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtg 50
Query: 832 ggacgtctggccgaagaaggcggc 855
||| || ||| | | |||||||||
Sbjct: 49 ggaggtttgggccaggaaggcggc 26
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 569 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 510
Query: 614 tt 615
||
Sbjct: 509 tt 508
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 309 gcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtg 250
Query: 832 ggacgtctggccgaagaaggcggc 855
||| |||||| | | |||||||||
Sbjct: 249 ggaggtctgggccaggaaggcggc 226
>gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020F20f, mRNA sequence
Length = 468
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 236 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 177
Query: 614 tt 615
||
Sbjct: 176 tt 175
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 289 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 230
Query: 614 tt 615
||
Sbjct: 229 tt 228
>gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101A21f, mRNA sequence
Length = 730
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 576 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 517
Query: 614 tt 615
||
Sbjct: 516 tt 515
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 315 gcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtg 256
Query: 832 ggacgtctggccgaagaaggcggc 855
||| |||||| | | |||||||||
Sbjct: 255 ggaggtctgggccaggaaggcggc 232
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 637 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 578
Query: 614 tt 615
||
Sbjct: 577 tt 576
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 377 gcagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtg 318
Query: 832 ggacgtctggccgaagaaggcggc 855
||| |||||| | | |||||||||
Sbjct: 317 ggaggtctgggccaggaaggcggc 294
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 289 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 230
Query: 614 tt 615
||
Sbjct: 229 tt 228
>gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022B19f, mRNA sequence
Length = 392
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 97 atcacagcatggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtc 38
Query: 614 tt 615
||
Sbjct: 37 tt 36
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 284 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 225
Query: 614 tt 615
||
Sbjct: 224 tt 223
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 294 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 235
Query: 614 tt 615
||
Sbjct: 234 tt 233
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 625 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 566
Query: 614 tt 615
||
Sbjct: 565 tt 564
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 365 gcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccggtggtctcgtg 306
Query: 832 ggacgtctg 840
||| |||||
Sbjct: 305 ggaggtctg 297
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 299 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 240
Query: 614 tt 615
||
Sbjct: 239 tt 238
>gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_O17 5', mRNA sequence
Length = 486
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 194 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 135
Query: 614 tt 615
||
Sbjct: 134 tt 133
>gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_M02 5', mRNA sequence
Length = 548
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 193 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 134
Query: 614 tt 615
||
Sbjct: 133 tt 132
>gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_C16 5', mRNA sequence
Length = 305
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 234 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 175
Query: 614 tt 615
||
Sbjct: 174 tt 173
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 486 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 427
Query: 614 tt 615
||
Sbjct: 426 tt 425
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 226 gcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccggtggtctcgtg 167
Query: 832 ggacgtctg 840
||| |||||
Sbjct: 166 ggaggtctg 158
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 419 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 360
Query: 614 tt 615
||
Sbjct: 359 tt 358
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 159 gcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccggtggtctcgtg 100
Query: 832 ggacgtctg 840
||| |||||
Sbjct: 99 ggaggtctg 91
>gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. vulgare cDNA clone HF03K16
5-PRIME, mRNA sequence
Length = 488
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 134 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 75
Query: 614 tt 615
||
Sbjct: 74 tt 73
>gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. vulgare cDNA clone HF19B23
5-PRIME, mRNA sequence
Length = 467
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 109 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 50
Query: 614 tt 615
||
Sbjct: 49 tt 48
>gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K16
5-PRIME, mRNA sequence
Length = 447
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 284 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 225
Query: 614 tt 615
||
Sbjct: 224 tt 223
>gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. vulgare cDNA clone HT07K10
5-PRIME, mRNA sequence
Length = 572
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 131 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 72
Query: 614 tt 615
||
Sbjct: 71 tt 70
>gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. vulgare cDNA clone HT08H14
5-PRIME, mRNA sequence
Length = 494
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 130 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 71
Query: 614 tt 615
||
Sbjct: 70 tt 69
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 75.8 bits (38), Expect = 2e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
||||| || |||| ||| |||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 652 atcacagcatggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtc 593
Query: 614 tt 615
||
Sbjct: 592 tt 591
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 772 gcagtatccccaggcaaacggtccatccggagcagtcgcccatccaccggtggtttcgtg 831
|||||| |||||||| || | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 392 gcagtagccccaggcgaaggccccgtccggtgcagtcgcccacccgccggtggtctcgtg 333
Query: 832 ggacgtctg 840
||| |||||
Sbjct: 332 ggaggtctg 324
>gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002L21f, mRNA sequence
Length = 839
Score = 73.8 bits (37), Expect = 9e-012
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 548 ccggtcatcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatg 607
||||| |||||| |||||| ||| || ||||| ||||||||||||||||||||||| |
Sbjct: 601 ccggtgatcacgtcgtggctcgaaggtttgggtgactgcggcgtcatccagaaccacaac 542
Query: 608 gccgtcttgaagg 620
|||||||||||||
Sbjct: 541 gccgtcttgaagg 529
>gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC003.D02, mRNA sequence
Length = 489
Score = 71.9 bits (36), Expect = 4e-011
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
|||||| |||||||||| |||||| ||||||| ||||||||||||||| || ||||||
Sbjct: 382 atcacgtcgtggcacgacggcttgttggactgcgtcgtcatccagaaccaaatcgccgtc 323
Query: 614 ttgaaggctaccacggggtctctcgccaccaggtccgggt 653
||||| || ||| ||||| |||||||||||||||||
Sbjct: 322 ttgaacgccaccgtcgggtccgacgccaccaggtccgggt 283
Score = 63.9 bits (32), Expect = 9e-009
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctcccgc 865
|||||||| |||||||| |||||||||||||||||||| | |||||||
Sbjct: 76 ccggtggtctcgtgggaagtctggccgaagaaggcggccacctcccgc 29
>gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC008.A09, mRNA sequence
Length = 486
Score = 71.9 bits (36), Expect = 4e-011
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
|||||| |||||||||| |||||| ||||||| ||||||||||||||| || ||||||
Sbjct: 150 atcacgtcgtggcacgacggcttgttggactgcgtcgtcatccagaaccaaatcgccgtc 91
Query: 614 ttgaaggctaccacggggtctctcgccaccaggtccgggt 653
||||| || ||| ||||| |||||||||||||||||
Sbjct: 90 ttgaacgccaccgtcgggtccgacgccaccaggtccgggt 51
>gb|BI949249.1|BI949249 HVSMEl0013A02f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013A02f, mRNA sequence
Length = 564
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 406 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 363
Score = 38.2 bits (19), Expect = 0.49
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
||||||| |||||||||||||||||
Sbjct: 505 atgggtcnccgtccatagtagggtgg 480
>gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025N19f, mRNA sequence
Length = 559
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 265 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 222
Score = 44.1 bits (22), Expect = 0.008
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 583 ctgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||| || |||||| ||||||
Sbjct: 500 ctgcgccgtcatccagaaccacatcgccgtcctgaagg 463
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 364 atgggtccccgtccatagtagggtgg 339
>gb|BI951463.1|BI951463 HVSMEm0001A11f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0001A11f, mRNA sequence
Length = 842
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 336 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 293
>gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0008F23f, mRNA sequence
Length = 881
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 346 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 303
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 445 atgggtccccgtccatagtagggtgg 420
>gb|BI953910.1|BI953910 HVSMEm0015F08f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0015F08f, mRNA sequence
Length = 695
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 351 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 308
Score = 42.1 bits (21), Expect = 0.031
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtg 743
|||||||| ||||||||||||||||
Sbjct: 448 atgggtccccgtccatagtagggtg 424
>gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023N21f, mRNA sequence
Length = 656
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 325 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 282
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 424 atgggtccccgtccatagtagggtgg 399
Score = 40.1 bits (20), Expect = 0.12
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 589 cgtcatccagaaccagatggccgtcttgaagg 620
||||||||||||||| || |||||| ||||||
Sbjct: 554 cgtcatccagaaccacatcgccgtcctgaagg 523
>gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003A01f, mRNA sequence
Length = 725
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 87 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 44
Score = 44.1 bits (22), Expect = 0.008
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 583 ctgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||| || |||||| ||||||
Sbjct: 322 ctgcgccgtcatccagaaccacatcgccgtcctgaagg 285
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 186 atgggtccccgtccatagtagggtgg 161
>gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009C12f, mRNA sequence
Length = 583
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 332 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 289
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 431 atgggtccccgtccatagtagggtgg 406
Score = 42.1 bits (21), Expect = 0.031
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 584 tgcggcgtcatccagaaccagatggccgtcttgaagg 620
|||| ||||||||||||||| || |||||| ||||||
Sbjct: 566 tgcgccgtcatccagaaccacatcgccgtcctgaagg 530
>gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014L16f, mRNA sequence
Length = 936
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 377 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 334
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 476 atgggtccccgtccatagtagggtgg 451
Score = 40.1 bits (20), Expect = 0.12
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 593 atccagaaccagatggccgtcttgaagg 620
||||||||||| || |||||||||||||
Sbjct: 602 atccagaaccacatcgccgtcttgaagg 575
>gb|BF265236.1|BF265236 HV_CEa0011O17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0011O17f, mRNA sequence
Length = 791
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 338 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 295
>gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0013H08f, mRNA sequence
Length = 923
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 328 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 285
Score = 44.1 bits (22), Expect = 0.008
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 583 ctgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||| || |||||||| ||||
Sbjct: 563 ctgcgccgtcatccagaaccacatcgccgtcttaaagg 526
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 427 atgggtccccgtccatagtagggtgg 402
>gb|BF262973.2|BF262973 HV_CEa0005H11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0005H11f, mRNA sequence
Length = 1124
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 217 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 174
Score = 40.1 bits (20), Expect = 0.12
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 593 atccagaaccagatggccgtcttgaagg 620
||||||||||| || |||||||||||||
Sbjct: 443 atccagaaccacatcgccgtcttgaagg 416
>gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006O09f, mRNA sequence
Length = 668
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 331 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 288
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 430 atgggtccccgtccatagtagggtgg 405
>gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014B14f, mRNA sequence
Length = 905
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 818 ccggtggtttcgtgggacgtctggccgaagaaggcggcgagctc 861
|||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 345 ccggtggtctcgtgggaggtctggccgaagaaggcggcgagctc 302
Score = 44.1 bits (22), Expect = 0.008
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 583 ctgcggcgtcatccagaaccagatggccgtcttgaagg 620
||||| ||||||||||||||| || |||||| ||||||
Sbjct: 580 ctgcgccgtcatccagaaccacatcgccgtcctgaagg 543
Score = 44.1 bits (22), Expect = 0.008
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 719 atgggtcctcgtccatagtagggtgg 744
|||||||| |||||||||||||||||
Sbjct: 444 atgggtccccgtccatagtagggtgg 419
>gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 5', mRNA sequence
Length = 507
Score = 71.9 bits (36), Expect = 4e-011
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 554 atcacggcgtggcacgagggcttgggcgactgcggcgtcatccagaaccagatggccgtc 613
|||||| |||||||||| |||||| ||||||| ||||||||||||||| || ||||||
Sbjct: 310 atcacgtcgtggcacgacggcttgttggactgcgtcgtcatccagaaccaaatcgccgtc 251
Query: 614 ttgaaggctaccacggggtctctcgccaccaggtccgggt 653
||||| || ||| ||||| |||||||||||||||||
Sbjct: 250 ttgaacgccaccgtcgggtccgacgccaccaggtccgggt 211
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 104,330
Number of Sequences: 312970
Number of extensions: 104330
Number of successful extensions: 25828
Number of sequences better than 0.5: 218
Number of HSP's better than 0.5 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25188
Number of HSP's gapped (non-prelim): 611
length of query: 908
length of database: 175,134,539
effective HSP length: 19
effective length of query: 889
effective length of database: 169,188,109
effective search space: 150408228901
effective search space used: 150408228901
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)