BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437739.2.2
(2231 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK119277.1|CK119277 218f19.p1 AtM1 Arabidopsis thaliana ... 121 6e-025
gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan e... 121 6e-025
gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan ... 121 6e-025
gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan ... 121 6e-025
ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzin... 121 6e-025
ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzin... 121 6e-025
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 111 5e-022
emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome... 111 5e-022
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 111 5e-022
ref|NM_114571.1| Arabidopsis thaliana hydrolase, hydrolyzin... 109 2e-021
gb|AV822340.1|AV822340 AV822340 RAFL5 Arabidopsis thaliana ... 105 3e-020
gb|CW803002.1|CW803002 WiscDsLox489-492N1 Arabidopsis thali... 86 3e-014
gb|AU237359.1|AU237359 AU237359 RAFL16 Arabidopsis thaliana... 84 1e-013
gb|BP854168.1|BP854168 BP854168 RAFL21 Arabidopsis thaliana... 84 1e-013
emb|BX823971.1|CNS0A6XU Arabidopsis thaliana Full-length cD... 84 1e-013
gb|BT022037.1| Arabidopsis thaliana At3g47010 gene, complet... 84 1e-013
ref|NM_114568.3| Arabidopsis thaliana hydrolase, hydrolyzin... 84 1e-013
gb|B23742.1|B23742 F16O11TR IGF Arabidopsis thaliana genomi... 78 7e-012
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 74 1e-010
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 74 1e-010
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 74 1e-010
emb|AL093022.1|CNS00W1S Arabidopsis thaliana genome survey ... 70 2e-009
gb|AV826590.1|AV826590 AV826590 RAFL8 Arabidopsis thaliana ... 68 7e-009
gb|BX839071.1|BX839071 BX839071 Arabidopsis thaliana Adult ... 68 7e-009
gb|AY062716.1| Arabidopsis thaliana beta-D-glucan exohydrol... 68 7e-009
gb|AY093346.1| Arabidopsis thaliana beta-D-glucan exohydrol... 68 7e-009
gb|AY093074.1| Arabidopsis thaliana beta-D-glucan exohydrol... 68 7e-009
gb|BT008366.1| Arabidopsis thaliana At3g47000 gene, complet... 68 7e-009
emb|BX823770.1|CNS0A4WM Arabidopsis thaliana Full-length cD... 68 7e-009
ref|NM_114567.2| Arabidopsis thaliana hydrolase, hydrolyzin... 68 7e-009
gb|AV823723.1|AV823723 AV823723 RAFL6 Arabidopsis thaliana ... 66 3e-008
gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like p... 66 3e-008
emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cD... 66 3e-008
ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzin... 66 3e-008
gb|BP846778.1|BP846778 BP846778 RAFL21 Arabidopsis thaliana... 62 4e-007
gb|AV829152.1|AV829152 AV829152 RAFL9 Arabidopsis thaliana ... 58 7e-006
gb|BP851825.1|BP851825 BP851825 RAFL21 Arabidopsis thaliana... 58 7e-006
gb|BH866490.1|BH866490 SALK_101396 Arabidopsis thaliana TDN... 54 1e-004
gb|BH866491.1|BH866491 SALK_101397 Arabidopsis thaliana TDN... 54 1e-004
gb|BZ379599.1|BZ379599 SALK_113608.47.85.x Arabidopsis thal... 54 1e-004
gb|BZ379600.1|BZ379600 SALK_113609.48.70.x Arabidopsis thal... 54 1e-004
gb|BZ766038.1|BZ766038 SALK_136548.53.00.x Arabidopsis thal... 54 1e-004
gb|CW842057.1|CW842057 ET11912.Ds3.04.23.2003.jw99.800 Arab... 54 1e-004
gb|AU236096.1|AU236096 AU236096 RAFL14 Arabidopsis thaliana... 54 1e-004
gb|BP798349.1|BP798349 BP798349 RAFL14 Arabidopsis thaliana... 54 1e-004
emb|CR379165.1| Arabidopsis thaliana transposon insertion S... 54 1e-004
emb|CR379169.1| Arabidopsis thaliana transposon insertion S... 54 1e-004
ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzin... 54 1e-004
gb|BP646984.1|BP646984 BP646984 RAFL19 Arabidopsis thaliana... 52 4e-004
gb|BZ766077.1|BZ766077 SALK_136604.50.45.x Arabidopsis thal... 48 0.007
gb|AA395613.1|AA395613 28001 Lambda-PRL2 Arabidopsis thalia... 46 0.026
gb|BU635545.1|BU635545 025B02 Infected Arabidopsis Leaf Ara... 46 0.026
gb|BP654490.1|BP654490 BP654490 RAFL19 Arabidopsis thaliana... 46 0.026
gb|BP811637.1|BP811637 BP811637 RAFL16 Arabidopsis thaliana... 46 0.026
gb|AV783076.1|AV783076 AV783076 RAFL5 Arabidopsis thaliana ... 44 0.10
gb|AV784514.1|AV784514 AV784514 RAFL5 Arabidopsis thaliana ... 44 0.10
gb|AV794844.1|AV794844 AV794844 RAFL8 Arabidopsis thaliana ... 44 0.10
gb|AV798147.1|AV798147 AV798147 RAFL9 Arabidopsis thaliana ... 44 0.10
gb|AV799272.1|AV799272 AV799272 RAFL9 Arabidopsis thaliana ... 44 0.10
gb|AV805245.1|AV805245 AV805245 RAFL9 Arabidopsis thaliana ... 44 0.10
gb|AV816720.1|AV816720 AV816720 RAFL9 Arabidopsis thaliana ... 44 0.10
gb|BU636687.1|BU636687 010C07 Infected Arabidopsis Leaf Ara... 44 0.10
gb|AV543737.1|AV543737 AV543737 Arabidopsis thaliana roots ... 44 0.10
gb|AV566057.1|AV566057 AV566057 Arabidopsis thaliana green ... 44 0.10
gb|CK121760.1|CK121760 201b14.p1 AtM1 Arabidopsis thaliana ... 44 0.10
gb|BP579031.1|BP579031 BP579031 RAFL14 Arabidopsis thaliana... 44 0.10
gb|BP586699.1|BP586699 BP586699 RAFL15 Arabidopsis thaliana... 44 0.10
gb|BP588500.1|BP588500 BP588500 RAFL15 Arabidopsis thaliana... 44 0.10
gb|BP595889.1|BP595889 BP595889 RAFL15 Arabidopsis thaliana... 44 0.10
gb|BP596364.1|BP596364 BP596364 RAFL15 Arabidopsis thaliana... 44 0.10
gb|BP601838.1|BP601838 BP601838 RAFL16 Arabidopsis thaliana... 44 0.10
gb|BP643756.1|BP643756 BP643756 RAFL19 Arabidopsis thaliana... 44 0.10
gb|BP644922.1|BP644922 BP644922 RAFL19 Arabidopsis thaliana... 44 0.10
gb|BP659455.1|BP659455 BP659455 RAFL19 Arabidopsis thaliana... 44 0.10
gb|BP784023.1|BP784023 BP784023 RAFL7 Arabidopsis thaliana ... 44 0.10
gb|BP786546.1|BP786546 BP786546 RAFL7 Arabidopsis thaliana ... 44 0.10
gb|BP814948.1|BP814948 BP814948 RAFL19 Arabidopsis thaliana... 44 0.10
dbj|AK221104.1| Arabidopsis thaliana mRNA for beta-D-glucan... 44 0.10
>gb|CK119277.1|CK119277 218f19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011F19218
5-PRIME, mRNA sequence
Length = 730
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 442 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 501
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 502 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 561
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 562 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 621
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 622 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 681
Query: 681 gagga 685
|||||
Sbjct: 682 gagga 686
>gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan exohydrolase-like protein mRNA,
complete cds
Length = 2194
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 454 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 513
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 514 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 573
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 574 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 633
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 634 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 693
Query: 681 gagga 685
|||||
Sbjct: 694 gagga 698
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 1879 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1938
Query: 1926 aa 1927
||
Sbjct: 1939 aa 1940
>gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase
(At5g20950) mRNA, complete cds
Length = 2220
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 474 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 533
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 534 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 593
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 594 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 653
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 654 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 713
Query: 681 gagga 685
|||||
Sbjct: 714 gagga 718
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 1899 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1958
Query: 1926 aa 1927
||
Sbjct: 1959 aa 1960
>gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase
(At5g20950) mRNA, complete cds
Length = 1906
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 316 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 375
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 376 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 435
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 436 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 495
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 496 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 555
Query: 681 gagga 685
|||||
Sbjct: 556 gagga 560
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 1741 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1800
Query: 1926 aa 1927
||
Sbjct: 1801 aa 1802
>ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.1 mRNA, complete
cds
Length = 2247
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 455 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 514
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 515 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 574
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 575 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 634
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 635 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 694
Query: 681 gagga 685
|||||
Sbjct: 695 gagga 699
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 1880 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1939
Query: 1926 aa 1927
||
Sbjct: 1940 aa 1941
>ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.2 mRNA, complete
cds
Length = 2266
Score = 121 bits (61), Expect = 6e-025
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 474 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 533
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 534 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 593
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagtgagagccaccggcatccagtacgcgttc 620
|||||||| || || || |||||||||||||| ||||| || || |||| || || ||
Sbjct: 594 aagaggattggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgccttt 653
Query: 621 gcgccatgcattgcggtgtgccgtgatccgaggtggggccggtgctacgagagctacagc 680
|| || || ||||| || || | ||||| || ||||| | ||||||||||||||||||
Sbjct: 654 gccccgtgtattgcagtttgtagggatccaagatggggaagatgctacgagagctacagc 713
Query: 681 gagga 685
|||||
Sbjct: 714 gagga 718
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 1899 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1958
Query: 1926 aa 1927
||
Sbjct: 1959 aa 1960
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 111 bits (56), Expect = 5e-022
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 450 atcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccacc 509
|||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| |||||
Sbjct: 17290743 atcccgatcatctatggcattgacgccgtccacggtaacaacaacgtctacggagccact 17290684
Query: 510 atcttcccccacaacgtcggcctcggagccaccagg 545
||||| ||||||||| ||||||||||||||||||||
Sbjct: 17290683 atctttccccacaacatcggcctcggagccaccagg 17290648
Score = 85.7 bits (43), Expect = 3e-014
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 17283166 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 17283107
Query: 519 cacaacgtcggcctcggagccaccagg 545
|||||| | || ||||| |||||||||
Sbjct: 17283106 cacaacattggactcggcgccaccagg 17283080
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 17280191 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 17280132
Query: 531 ctcggagccaccagg 545
|||||||||||||||
Sbjct: 17280131 ctcggagccaccagg 17280117
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 17294483 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 17294424
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 17294423 tttccccacaa 17294413
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
Length = 140680
Score = 111 bits (56), Expect = 5e-022
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 450 atcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccacc 509
|||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| |||||
Sbjct: 44124 atcccgatcatctatggcattgacgccgtccacggtaacaacaacgtctacggagccact 44065
Query: 510 atcttcccccacaacgtcggcctcggagccaccagg 545
||||| ||||||||| ||||||||||||||||||||
Sbjct: 44064 atctttccccacaacatcggcctcggagccaccagg 44029
Score = 85.7 bits (43), Expect = 3e-014
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 36547 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 36488
Query: 519 cacaacgtcggcctcggagccaccagg 545
|||||| | || ||||| |||||||||
Sbjct: 36487 cacaacattggactcggcgccaccagg 36461
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 33572 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 33513
Query: 531 ctcggagccaccagg 545
|||||||||||||||
Sbjct: 33512 ctcggagccaccagg 33498
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 47864 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 47805
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 47804 tttccccacaa 47794
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 111 bits (56), Expect = 5e-022
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 450 atcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccacc 509
|||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| |||||
Sbjct: 17337681 atcccgatcatctatggcattgacgccgtccacggtaacaacaacgtctacggagccact 17337622
Query: 510 atcttcccccacaacgtcggcctcggagccaccagg 545
||||| ||||||||| ||||||||||||||||||||
Sbjct: 17337621 atctttccccacaacatcggcctcggagccaccagg 17337586
Score = 85.7 bits (43), Expect = 3e-014
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 17330104 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 17330045
Query: 519 cacaacgtcggcctcggagccaccagg 545
|||||| | || ||||| |||||||||
Sbjct: 17330044 cacaacattggactcggcgccaccagg 17330018
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 17327129 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 17327070
Query: 531 ctcggagccaccagg 545
|||||||||||||||
Sbjct: 17327069 ctcggagccaccagg 17327055
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 17341421 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 17341362
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 17341361 tttccccacaa 17341351
>ref|NM_114571.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47040 mRNA, complete cds
Length = 1911
Score = 109 bits (55), Expect = 2e-021
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 450 atcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccacc 509
|||||||| ||||| ||||| |||||||||||||| |||||||||| ||||| |||||
Sbjct: 277 atcccgatcatctatggcattgacgccgtccacggtaacaacaacgtctacggagccact 336
Query: 510 atcttcccccacaacgtcggcctcggagccaccag 544
||||| ||||||||| |||||||||||||||||||
Sbjct: 337 atctttccccacaacatcggcctcggagccaccag 371
>gb|AV822340.1|AV822340 AV822340 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-B18 5',
mRNA sequence
Length = 608
Score = 105 bits (53), Expect = 3e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 457 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 516
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagggatccaaacctggtg 560
||||||||||| ||||| ||||| || ||||| |||| |||||||||||| ||||| ||
Sbjct: 517 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgtt 576
Query: 561 aagaggatcggcgccgcgaccgcgcttgaagt 592
|||||||| || || || ||||| ||||||||
Sbjct: 577 aagaggattggggcagcaaccgcncttgaagt 608
>gb|CW803002.1|CW803002 WiscDsLox489-492N1 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 774
Score = 85.7 bits (43), Expect = 3e-014
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 508 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 567
Query: 519 cacaacgtcggcctcggagccaccagg 545
|||||| | || ||||| |||||||||
Sbjct: 568 cacaacattggactcggcgccaccagg 594
>gb|AU237359.1|AU237359 AU237359 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-17-D15 5',
mRNA sequence
Length = 643
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 237 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 296
Query: 519 cacaacgtcggcctcggagccaccag 544
|||||| | || ||||| ||||||||
Sbjct: 297 cacaacattggactcggcgccaccag 322
>gb|BP854168.1|BP854168 BP854168 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-L05 5',
mRNA sequence
Length = 385
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 300 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 359
Query: 519 cacaacgtcggcctcggagccaccag 544
|||||| | || ||||| ||||||||
Sbjct: 360 cacaacattggactcggcgccaccag 385
>emb|BX823971.1|CNS0A6XU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH11ZD09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1714
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 122 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 181
Query: 519 cacaacgtcggcctcggagccaccag 544
|||||| | || ||||| ||||||||
Sbjct: 182 cacaacattggactcggcgccaccag 207
>gb|BT022037.1| Arabidopsis thaliana At3g47010 gene, complete cds
Length = 1815
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 215 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 274
Query: 519 cacaacgtcggcctcggagccaccag 544
|||||| | || ||||| ||||||||
Sbjct: 275 cacaacattggactcggcgccaccag 300
>ref|NM_114568.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47010 mRNA, complete cds
Length = 1875
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 236 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 295
Query: 519 cacaacgtcggcctcggagccaccag 544
|||||| | || ||||| ||||||||
Sbjct: 296 cacaacattggactcggcgccaccag 321
>gb|B23742.1|B23742 F16O11TR IGF Arabidopsis thaliana genomic clone F16O11, DNA
sequence
Length = 448
Score = 77.8 bits (39), Expect = 7e-012
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 459 atctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccc 518
|||||||||| |||||||| |||||| |||| ||||| |||||||||||| ||||||||
Sbjct: 7 atctacggcactgacgccgttcacggcaacaataacgtctacggcgccaccgtcttcccc 66
Query: 519 cacaacgtcggcctcggagccaccagg 545
|||| | | || ||||| |||||||||
Sbjct: 67 cacagcattggactcggcgccaccagg 93
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 73.8 bits (37), Expect = 1e-010
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 54060 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 54001
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||||||| ||||| ||||| || ||||| |||| |||||||
Sbjct: 54000 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagg 53956
Score = 48.1 bits (24), Expect = 0.007
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 543 agggatccaaacctggtgaagaggatcggcgccgcgaccgcgcttgaagtgagagc 598
|||||||| ||||| || |||||||| || || || |||||||||||||| |||||
Sbjct: 53822 agggatcctaaccttgttaagaggattggggcagcaaccgcgcttgaagtcagagc 53767
Score = 46.1 bits (23), Expect = 0.026
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 663 tgctacgagagctacagcgagga 685
|||||||||||||||||||||||
Sbjct: 53604 tgctacgagagctacagcgagga 53582
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 51435 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 51376
Query: 1926 aa 1927
||
Sbjct: 51375 aa 51374
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 73.8 bits (37), Expect = 1e-010
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 6822900 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 6822841
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||||||| ||||| ||||| || ||||| |||| |||||||
Sbjct: 6822840 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagg 6822796
Score = 48.1 bits (24), Expect = 0.007
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 543 agggatccaaacctggtgaagaggatcggcgccgcgaccgcgcttgaagtgagagc 598
|||||||| ||||| || |||||||| || || || |||||||||||||| |||||
Sbjct: 6822662 agggatcctaaccttgttaagaggattggggcagcaaccgcgcttgaagtcagagc 6822607
Score = 46.1 bits (23), Expect = 0.026
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 663 tgctacgagagctacagcgagga 685
|||||||||||||||||||||||
Sbjct: 6822444 tgctacgagagctacagcgagga 6822422
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 6820275 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 6820216
Query: 1926 aa 1927
||
Sbjct: 6820215 aa 6820214
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 73.8 bits (37), Expect = 1e-010
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 7110370 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 7110311
Query: 501 ggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||||||| ||||| ||||| || ||||| |||| |||||||
Sbjct: 7110310 ggcgccaccattttcccgcacaatgtaggccttggagtcaccagg 7110266
Score = 48.1 bits (24), Expect = 0.007
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 543 agggatccaaacctggtgaagaggatcggcgccgcgaccgcgcttgaagtgagagc 598
|||||||| ||||| || |||||||| || || || |||||||||||||| |||||
Sbjct: 7110132 agggatcctaaccttgttaagaggattggggcagcaaccgcgcttgaagtcagagc 7110077
Score = 46.1 bits (23), Expect = 0.026
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 663 tgctacgagagctacagcgagga 685
|||||||||||||||||||||||
Sbjct: 7109914 tgctacgagagctacagcgagga 7109892
Score = 44.1 bits (22), Expect = 0.10
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| | ||||| ||||||
Sbjct: 7107745 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 7107686
Query: 1926 aa 1927
||
Sbjct: 7107685 aa 7107684
>emb|AL093022.1|CNS00W1S Arabidopsis thaliana genome survey sequence SP6 end of BAC T10O17
of TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 366
Score = 69.9 bits (35), Expect = 2e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 118 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 59
Query: 531 ctcggagccaccagg 545
|||||||||||||||
Sbjct: 58 ctcggagccaccagg 44
>gb|AV826590.1|AV826590 AV826590 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-18-I10 5',
mRNA sequence
Length = 625
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 322 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 381
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 382 ctcggagccaccag 395
>gb|BX839071.1|BX839071 BX839071 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS31ZH02 5PRIM, mRNA
sequence
Length = 624
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 311 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 370
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 371 ctcggagccaccag 384
>gb|AY062716.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein
(At3g47000; F13I12.50) mRNA, complete cds
Length = 2016
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 321 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 380
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 381 ctcggagccaccag 394
>gb|AY093346.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein
(At3g47000) mRNA, complete cds
Length = 1924
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 298 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 357
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 358 ctcggagccaccag 371
>gb|AY093074.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein
(At3g47000) mRNA, complete cds
Length = 1991
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 321 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 380
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 381 ctcggagccaccag 394
>gb|BT008366.1| Arabidopsis thaliana At3g47000 gene, complete cds
Length = 1827
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 298 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 357
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 358 ctcggagccaccag 371
>emb|BX823770.1|CNS0A4WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS73ZG05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1972
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 321 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 380
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 381 ctcggagccaccag 394
>ref|NM_114567.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47000 mRNA, complete cds
Length = 2015
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 321 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 380
Query: 531 ctcggagccaccag 544
||||||||||||||
Sbjct: 381 ctcggagccaccag 394
>gb|AV823723.1|AV823723 AV823723 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-07-P20 5',
mRNA sequence
Length = 666
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 486 cacaacaacgtgtacggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||| ||||||| ||||||||| ||||| || ||||| |||||||||| |||||||
Sbjct: 428 cacaacaccgtgtacaacgccaccattttcccgcataacgtaggcctcggagtcaccagg 487
Query: 546 gatcc 550
|||||
Sbjct: 488 gatcc 492
>gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like protein (At5g20940)
mRNA, complete cds
Length = 2078
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 486 cacaacaacgtgtacggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||| ||||||| ||||||||| ||||| || ||||| |||||||||| |||||||
Sbjct: 427 cacaacaccgtgtacaacgccaccattttcccgcataacgtaggcctcggagtcaccagg 486
Query: 546 gatcc 550
|||||
Sbjct: 487 gatcc 491
>emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB54ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1734
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 486 cacaacaacgtgtacggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||| ||||||| ||||||||| ||||| || ||||| |||||||||| |||||||
Sbjct: 345 cacaacaccgtgtacaacgccaccattttcccgcataacgtaggcctcggagtcaccagg 404
Query: 546 gatcc 550
|||||
Sbjct: 405 gatcc 409
>ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20940 mRNA, complete cds
Length = 2078
Score = 65.9 bits (33), Expect = 3e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 486 cacaacaacgtgtacggcgccaccatcttcccccacaacgtcggcctcggagccaccagg 545
||||||| ||||||| ||||||||| ||||| || ||||| |||||||||| |||||||
Sbjct: 427 cacaacaccgtgtacaacgccaccattttcccgcataacgtaggcctcggagtcaccagg 486
Query: 546 gatcc 550
|||||
Sbjct: 487 gatcc 491
>gb|BP846778.1|BP846778 BP846778 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-98-D08 5',
mRNA sequence
Length = 409
Score = 61.9 bits (31), Expect = 4e-007
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 471 gacgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcggc 530
||||| ||||||||| |||| || || ||||||||||| ||||||| |||||| | |||
Sbjct: 316 gacgctgtccacggcaacaataatgtctacggcgccactgtcttccctcacaacattggc 375
Query: 531 ctcggagccac 541
|||||||||||
Sbjct: 376 ctcggagccac 386
>gb|AV829152.1|AV829152 AV829152 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-40-A02 5',
mRNA sequence
Length = 572
Score = 58.0 bits (29), Expect = 7e-006
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 441 cgcctcggcatcccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtac 500
||||| || ||||| ||||||||||| || || || || ||||| |||||||| |||||
Sbjct: 475 cgccttgggatccctatgatctacgggattgatgctgttcacggtcacaacaatgtgtat 534
Query: 501 ggcgccaccatcttccc 517
||||||||||| |||||
Sbjct: 535 ggcgccaccattttccc 551
>gb|BP851825.1|BP851825 BP851825 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-K18 5',
mRNA sequence
Length = 389
Score = 58.0 bits (29), Expect = 7e-006
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 473 cgccgtccacggccacaacaacgtgtacggcgccaccatcttcccccacaacgtcgg-cc 531
|||||| |||||| |||| ||||| |||||||||||| | |||||||||||| | || ||
Sbjct: 243 cgccgttcacggcaacaataacgtctacggcgccaccgtattcccccacaacattggacc 302
Query: 532 tcggagccaccag 544
|||| ||||||||
Sbjct: 303 tcggggccaccag 315
>gb|BH866490.1|BH866490 SALK_101396 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_101396, DNA sequence
Length = 194
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 190 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 131
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 130 tttccccacaa 120
>gb|BH866491.1|BH866491 SALK_101397 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_101397, DNA sequence
Length = 424
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 420 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 361
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 360 tttccccacaa 350
>gb|BZ379599.1|BZ379599 SALK_113608.47.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_113608.47.85.x,
DNA sequence
Length = 289
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 285 ccgataatttacggcattgacgctgttcatggcaacaatgacgtttacggcgccaccatc 226
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 225 tttccccacaa 215
>gb|BZ379600.1|BZ379600 SALK_113609.48.70.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_113609.48.70.x,
DNA sequence
Length = 323
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 319 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 260
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 259 tttccccacaa 249
>gb|BZ766038.1|BZ766038 SALK_136548.53.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_136548.53.00.x,
DNA sequence
Length = 185
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 181 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 122
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 121 tttccccacaa 111
>gb|CW842057.1|CW842057 ET11912.Ds3.04.23.2003.jw99.800 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET11912, DNA sequence
Length = 800
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 623 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 682
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 683 tttccccacaa 693
>gb|AU236096.1|AU236096 AU236096 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-65-H16 5',
mRNA sequence
Length = 496
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 312 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 371
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 372 tttccccacaa 382
>gb|BP798349.1|BP798349 BP798349 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-06-P12 5',
mRNA sequence
Length = 388
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 311 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 370
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 371 tttccccacaa 381
>emb|CR379165.1| Arabidopsis thaliana transposon insertion STS GT_5.107795, sequence
tagged site
Length = 481
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 59 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 118
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 119 tttccccacaa 129
>emb|CR379169.1| Arabidopsis thaliana transposon insertion STS GT_5.107941, sequence
tagged site
Length = 477
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 55 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 114
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 115 tttccccacaa 125
>ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47050 mRNA, complete cds
Length = 1928
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| |||||||||||||||
Sbjct: 312 ccgataatttacggcattgacgctgttcatggcaacaatgacgtctacggcgccaccatc 371
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 372 tttccccacaa 382
>gb|BP646984.1|BP646984 BP646984 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-73-P05 3',
mRNA sequence
Length = 401
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1866 tacgggttcacggggaagctgccgcggacgtggttcaggtcggtggaccagctgccgatg 1925
||||||||||| || ||| || | ||||||||||| | ||||||| ||||||| ||||||
Sbjct: 340 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaaccagctaccgatg 281
Query: 1926 aa 1927
||
Sbjct: 280 aa 279
>gb|BZ766077.1|BZ766077 SALK_136604.50.45.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_136604.50.45.x,
DNA sequence
Length = 185
Score = 48.1 bits (24), Expect = 0.007
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 453 ccgatgatctacggcatcgacgccgtccacggccacaacaacgtgtacggcgccaccatc 512
||||| || |||||||| ||||| || || ||| |||| |||| || ||||||||||||
Sbjct: 181 ccgataatttacggcattgacgctgttcatggcaacaatgacgtttanggcgccaccatc 122
Query: 513 ttcccccacaa 523
|| ||||||||
Sbjct: 121 tttccccacaa 111
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 592,770
Number of Sequences: 1013581
Number of extensions: 592770
Number of successful extensions: 45826
Number of sequences better than 0.5: 79
Number of HSP's better than 0.5 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 44922
Number of HSP's gapped (non-prelim): 904
length of query: 2231
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2210
effective length of database: 887,655,671
effective search space: 1961719032910
effective search space used: 1961719032910
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)