BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2921719.2.1
(779 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q947Y1|Q947Y1 Putative cyclin-dependent kinase regulatory s... 156 3e-37
sptr|O23249|O23249 CKS1 protein (Putative cyclin-dependent kinas... 156 3e-37
sptr|Q9SJJ5|Q9SJJ5 Putative cyclin-dependent kinase regulatory s... 152 4e-36
sptr|Q8GZU5|Q8GZU5 CKS1 protein. 150 2e-35
sw|P55933|CKS1_PHYPO Probable cyclin-dependent kinases regulator... 126 4e-28
sptrnew|EAA06091|EAA06091 EbiP5592 (Fragment). 115 8e-25
sw|Q25330|CKS1_LEIME Cyclin-dependent kinases regulatory subunit... 114 1e-24
sptr|Q9VHN1|Q9VHN1 CG9790 protein (GM01344p). 114 2e-24
sw|Q24152|CKS1_DROME Cyclin-dependent kinases regulatory subunit. 113 2e-24
sptrnew|AAP35860|AAP35860 CDC28 protein kinase regulatory subuni... 113 3e-24
sptrnew|AAP35276|AAP35276 CDC28 protein kinase regulatory subuni... 113 3e-24
sptrnew|AAH22647|AAH22647 CDC28 protein kinase regulatory subuni... 113 3e-24
sptrnew|BAC25295|BAC25295 ES cells cDNA, RIKEN full-length enric... 113 3e-24
sptrnew|BAB23199|BAB23199 18-day embryo whole body cDNA, RIKEN f... 113 3e-24
sptrnew|BAB22110|BAB22110 Adult male kidney cDNA, RIKEN full-len... 113 3e-24
sptr|Q9D0L3|Q9D0L3 2610005D03Rik protein. 113 3e-24
sw|P56390|CKS2_MOUSE Cyclin-dependent kinases regulatory subunit... 113 3e-24
sw|P33552|CKS2_HUMAN Cyclin-dependent kinases regulatory subunit... 113 3e-24
sw|P33551|CKS1_HUMAN Cyclin-dependent kinases regulatory subunit... 113 3e-24
sw|P41384|CKS1_PATVU Cyclin-dependent kinases regulatory subunit... 112 4e-24
sptr|Q9D108|Q9D108 2610005D03Rik protein. 112 7e-24
sptr|Q962Y1|Q962Y1 CDC28 protein kinase 1-like protein. 112 7e-24
sptr|Q86QI7|Q86QI7 Cyclin-dependent kinase regulatory subunit. 108 6e-23
sw|Q91879|CKS2_XENLA Cyclin-dependent kinases regulatory subunit... 108 1e-22
sptr|Q8IEX0|Q8IEX0 Cyclin dependant kinases regulatory subunit. 105 7e-22
sw|Q17868|CKS1_CAEEL Cyclin-dependent kinases regulatory subunit. 102 6e-21
sptrnew|EAA03636|EAA03636 ENSANGP00000018659 (Fragment). 100 2e-20
sptr|Q95XM4|Q95XM4 Hypothetical 14.3 kDa protein. 99 6e-20
sptrnew|EAA42928|EAA42928 GLP_170_20046_20303. 98 1e-19
sw|P20486|CKS1_YEAST Cyclin-dependent kinases regulatory subunit... 96 4e-19
>sptr|Q947Y1|Q947Y1 Putative cyclin-dependent kinase regulatory
subunit.
Length = 90
Score = 156 bits (395), Expect = 3e-37
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+N+
Sbjct: 61 EPHIMLFRRPLNF 73
>sptr|O23249|O23249 CKS1 protein (Putative cyclin-dependent kinase
regulatory subunit).
Length = 87
Score = 156 bits (394), Expect = 3e-37
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>sptr|Q9SJJ5|Q9SJJ5 Putative cyclin-dependent kinase regulatory
subunit.
Length = 83
Score = 152 bits (385), Expect = 4e-36
Identities = 68/73 (93%), Positives = 73/73 (100%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>sptr|Q8GZU5|Q8GZU5 CKS1 protein.
Length = 83
Score = 150 bits (379), Expect = 2e-35
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
MGQIQYSEKY DDT+EYRHVVLPPEVAKLL KNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1 MGQIQYSEKYLDDTFEYRHVVLPPEVAKLLIKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
Query: 278 EPHIMLFRRPINY 316
EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPLNY 73
>sw|P55933|CKS1_PHYPO Probable cyclin-dependent kinases regulatory
subunit.
Length = 84
Score = 126 bits (316), Expect = 4e-28
Identities = 53/68 (77%), Positives = 63/68 (92%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
IQYSEKY+DD +EYRHV+LPP+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6 IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65
Query: 287 IMLFRRPI 310
I+LFRR +
Sbjct: 66 ILLFRREV 73
>sptrnew|EAA06091|EAA06091 EbiP5592 (Fragment).
Length = 73
Score = 115 bits (287), Expect = 8e-25
Identities = 48/68 (70%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKY+DD YEYRHV+LPP++AK +PK L++E EWR +GVQQS GWV Y IH PEP
Sbjct: 5 QIQYSEKYYDDVYEYRHVILPPDLAKYVPKTHLMTETEWRNLGVQQSPGWVLYMIHSPEP 64
Query: 284 HIMLFRRP 307
H++LFRRP
Sbjct: 65 HVLLFRRP 72
>sw|Q25330|CKS1_LEIME Cyclin-dependent kinases regulatory subunit
(P12LMMCKS1).
Length = 99
Score = 114 bits (285), Expect = 1e-24
Identities = 48/80 (60%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Frame = +2
Query: 80 REALVDMGQIQ----YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSR 247
REAL+ + ++Q YS+KY+DD +EYRHV+LP ++A+L+P +RL+SE EWR +GVQQS+
Sbjct: 18 REALIIIKKLQCKILYSDKYYDDMFEYRHVILPKDLARLVPTSRLMSEMEWRQLGVQQSQ 77
Query: 248 GWVHYAIHRPEPHIMLFRRP 307
GWVHY IH+PEPH++LF+RP
Sbjct: 78 GWVHYMIHKPEPHVLLFKRP 97
>sptr|Q9VHN1|Q9VHN1 CG9790 protein (GM01344p).
Length = 96
Score = 114 bits (284), Expect = 2e-24
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QIQYSEKYFDD +EYRHV+LPP++AK +PK L++E EWR +GVQQS GWVHY +H PEP
Sbjct: 5 QIQYSEKYFDDNFEYRHVILPPDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64
Query: 284 HIMLFRR 304
H++LFRR
Sbjct: 65 HVILFRR 71
>sw|Q24152|CKS1_DROME Cyclin-dependent kinases regulatory subunit.
Length = 74
Score = 113 bits (283), Expect = 2e-24
Identities = 46/67 (68%), Positives = 59/67 (88%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY+D+ +EYRHVVLP E+ K++PK L++E EWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5 IYYSDKYYDEQFEYRHVVLPKELVKMVPKTHLMTEAEWRSIGVQQSRGWIHYMIHKPEPH 64
Query: 287 IMLFRRP 307
I+LFRRP
Sbjct: 65 ILLFRRP 71
>sptrnew|AAP35860|AAP35860 CDC28 protein kinase regulatory subunit
1B.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptrnew|AAP35276|AAP35276 CDC28 protein kinase regulatory subunit
2.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptrnew|AAH22647|AAH22647 CDC28 protein kinase regulatory subunit
2.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptrnew|BAC25295|BAC25295 ES cells cDNA, RIKEN full-length enriched
library, clone:2410005G18 product:CDC28 protein kinase
1, full insert sequence.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptrnew|BAB23199|BAB23199 18-day embryo whole body cDNA, RIKEN
full-length enriched library, clone:1110038L14
product:CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 2
(XE-P9) homolog.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptrnew|BAB22110|BAB22110 Adult male kidney cDNA, RIKEN full-length
enriched library, clone:0610010C14
product:CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 2
(XE-P9) homolog.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptr|Q9D0L3|Q9D0L3 2610005D03Rik protein.
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYEDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sw|P56390|CKS2_MOUSE Cyclin-dependent kinases regulatory subunit 2
(CKS-2).
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sw|P33552|CKS2_HUMAN Cyclin-dependent kinases regulatory subunit 2
(CKS-2).
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ YEYRHV+LP E++K +PK L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sw|P33551|CKS1_HUMAN Cyclin-dependent kinases regulatory subunit 1
(CKS-1) (Sid1334) (PNAS-16 / PNAS-143).
Length = 79
Score = 113 bits (282), Expect = 3e-24
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D+ +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sw|P41384|CKS1_PATVU Cyclin-dependent kinases regulatory subunit
(SUC1 homolog).
Length = 76
Score = 112 bits (281), Expect = 4e-24
Identities = 46/69 (66%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KYFD+ +EYRHV+LP ++AK++PKN L+SE EWR+IGVQQS GW+HY H PEP
Sbjct: 5 QIYYSDKYFDEDFEYRHVMLPKDIAKMVPKNHLMSEAEWRSIGVQQSHGWIHYMKHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRR +
Sbjct: 65 HILLFRRKV 73
>sptr|Q9D108|Q9D108 2610005D03Rik protein.
Length = 79
Score = 112 bits (279), Expect = 7e-24
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
QI YS+KY D +EYRHV+LP ++AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5 QIYYSDKYDDKEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64
Query: 284 HIMLFRRPI 310
HI+LFRRP+
Sbjct: 65 HILLFRRPL 73
>sptr|Q962Y1|Q962Y1 CDC28 protein kinase 1-like protein.
Length = 79
Score = 112 bits (279), Expect = 7e-24
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY+DD +EYRHV+LP E+AKL+PK+ L+SE+EWR IGVQQS+GW HY H PEPH
Sbjct: 6 IYYSDKYYDDKFEYRHVMLPKELAKLVPKSHLMSESEWRGIGVQQSQGWCHYMKHEPEPH 65
Query: 287 IMLFRRP 307
I+LFRRP
Sbjct: 66 ILLFRRP 72
>sptr|Q86QI7|Q86QI7 Cyclin-dependent kinase regulatory subunit.
Length = 98
Score = 108 bits (271), Expect = 6e-23
Identities = 44/68 (64%), Positives = 58/68 (85%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YSEKY+DD YEYRHVVLP + A+L+P++RL+ E+EWR +GVQQS GW HY H+PEP
Sbjct: 28 KILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPEP 87
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 88 HVLLFKRP 95
>sw|Q91879|CKS2_XENLA Cyclin-dependent kinases regulatory subunit 2
(XE-P9).
Length = 79
Score = 108 bits (269), Expect = 1e-22
Identities = 46/68 (67%), Positives = 56/68 (82%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 286
I YS+KY D+ +EYRHV+LP E+AK +PK L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6 IYYSDKYTDEHFEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65
Query: 287 IMLFRRPI 310
I+LFRRP+
Sbjct: 66 ILLFRRPL 73
>sptr|Q8IEX0|Q8IEX0 Cyclin dependant kinases regulatory subunit.
Length = 98
Score = 105 bits (262), Expect = 7e-22
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = +2
Query: 104 QIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEP 283
+I YS+KY+DD YEYRHV+LP + ++L+P+ RL+ E+EWR +GVQQS GW HY +H PEP
Sbjct: 28 KILYSDKYYDDEYEYRHVILPKDFSRLVPRGRLMEESEWRQLGVQQSVGWRHYMLHAPEP 87
Query: 284 HIMLFRRP 307
H++LF+RP
Sbjct: 88 HVLLFKRP 95
>sw|Q17868|CKS1_CAEEL Cyclin-dependent kinases regulatory subunit.
Length = 94
Score = 102 bits (254), Expect = 6e-21
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS KY DD +EYRHV + +V+KL+PKNRL+SE EWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEFEYRHVHVTKDVSKLIPKNRLMSETEWRSLGIQQSPGWMHYMIHGPERHVL 69
Query: 293 LFRRPI 310
LFRRP+
Sbjct: 70 LFRRPL 75
>sptrnew|EAA03636|EAA03636 ENSANGP00000018659 (Fragment).
Length = 57
Score = 100 bits (249), Expect = 2e-20
Identities = 42/54 (77%), Positives = 50/54 (92%)
Frame = +2
Query: 149 RHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPI 310
RHVVLP ++AKL+PK L++ENEWRAIGVQQSRGWVHY +H+PEPHI+LFRRPI
Sbjct: 2 RHVVLPKDIAKLVPKTHLMTENEWRAIGVQQSRGWVHYMVHQPEPHILLFRRPI 55
>sptr|Q95XM4|Q95XM4 Hypothetical 14.3 kDa protein.
Length = 118
Score = 99.0 bits (245), Expect = 6e-20
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +2
Query: 98 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 277
M I YS +Y DD YEYRHV+LP V++ +PK RLLSE EWR GVQQS GW HY +H P
Sbjct: 1 MEDIYYSPRYEDDEYEYRHVILPQAVSRKVPKGRLLSEAEWRRAGVQQSLGWEHYMVHNP 60
Query: 278 EPHIMLFRR 304
E HI+LFRR
Sbjct: 61 EKHILLFRR 69
>sptrnew|EAA42928|EAA42928 GLP_170_20046_20303.
Length = 85
Score = 97.8 bits (242), Expect = 1e-19
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 113 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIM 292
YS KY+DD YEYRHV++P E+ K + LLSE EWR +G+Q S+GWVHY H+PEP+I+
Sbjct: 11 YSRKYYDDVYEYRHVIMPEEMVKKYNFDHLLSEQEWRGLGIQMSQGWVHYDYHKPEPNIL 70
Query: 293 LFRRP 307
+FRRP
Sbjct: 71 MFRRP 75
>sw|P20486|CKS1_YEAST Cyclin-dependent kinases regulatory subunit
(Cell division control protein CKS1).
Length = 150
Score = 96.3 bits (238), Expect = 4e-19
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = +2
Query: 107 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 259
I YS +Y DD YEYRHV+LP + K++P + R+L+E+EWR +G+ QS GW H
Sbjct: 28 IHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87
Query: 260 YAIHRPEPHIMLFRRPINY 316
Y H PEPHI+LF+RP+NY
Sbjct: 88 YECHAPEPHILLFKRPLNY 106
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 513,262,508
Number of Sequences: 1272877
Number of extensions: 10020738
Number of successful extensions: 27103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27097
length of database: 406,886,216
effective HSP length: 120
effective length of database: 254,140,976
effective search space used: 35325595664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)